Citrus Sinensis ID: 044262

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF
Secondary Structure (PSIPRED)
cEEEccccccccccccccccccccHHHHHHHHHHHHHHHccccccccEEEccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEEcccccEEEEEccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHccccccccEEEEEEccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cEEEEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEccccHcccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcHHHcccccccEEEEccEEEEEEEEcccccccccccccccccccccccccccccccccccccHEEEEEEHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHEEcHHHHHHHHccccHHccccccccccEEccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEEEc
Coil and Loop (DISEMBL)
MLLSIIrltsgqtcydtgnfttnstygknrDLFLSSLAsnvtankgfytstigqipDAVYGLAlcrgdstpescascLNFTVRdmmkncpnqkeaiswggmdfpcvvrysnrsffgklelkptevnhninNITSSLTQFDRIWRSLMDRVLAKAssgnsklkfateeanlTSSETIYALMqctpdisqsdcEFCLRQSMADLqsccygkkgsyvlgpscifrwemypfygatadslspsplsppstttdttttkdkggnsissGTVIIIVVSTSIFIIALVALVTCVFLRRRkqkqdltkadeintveslqfdfstirdatnnfstdnklgqggfgaVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLlgfsfegtERLLIYEF
Flexible Loop (DISEMBL)
MLLSIIRltsgqtcydtgnfttnstygKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLelkptevnhninnITSSLTQFDRIWRSLMDRVLAKassgnsklkfatEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATadslspsplsppstttdttttkdkggnsissGTVIIIVVSTSIFIIALVALVTCVFLRRRkqkqdltkadeintveslqfdfSTIRDATnnfstdnklgqGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLvrllgfsfegterlliyef
Low Complexity Region (SEG)
MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGatadslspsplsppstttdttttKDKGGNsissgtviiivvstsifiiALVALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF
Disordered region (IsUnstruct)
**LSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAK****************LTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGAT*******************************GTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY**
Disordered Region (DISOPRED)
MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF
Disordered Region (DISEMBL)
MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATAD*********************KGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF
Disordered Region (DISPRO)
MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATA****************************SSGTVIIIVVSTSIFIIALVALVTCVFLRRRK********DEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	399	2.2.26 [Sep-21-2011]
Q8H199	658	Cysteine-rich receptor-li	yes	no	0.974	0.591	0.479	1e-102
Q9LDT0	700	Putative cysteine-rich re	no	no	0.987	0.562	0.452	2e-95
Q9ZP16	667	Cysteine-rich receptor-li	no	no	0.969	0.580	0.480	2e-95
O65476	662	Putative cysteine-rich re	no	no	0.967	0.583	0.454	2e-90
Q9LDQ3	669	Putative cysteine-rich re	no	no	0.952	0.568	0.429	2e-86
O65483	636	Cysteine-rich receptor-li	no	no	0.919	0.577	0.441	6e-85
Q9LDN1	636	Putative cysteine-rich re	no	no	0.937	0.588	0.432	8e-83
Q8L710	686	Cysteine-rich receptor-li	no	no	0.977	0.568	0.451	8e-83
Q9T0J1	665	Cysteine-rich receptor-li	no	no	0.959	0.575	0.436	1e-81
Q9XEC7	646	Cysteine-rich receptor-li	no	no	0.962	0.594	0.427	1e-81

>sp|Q8H199|CRK14_ARATH Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2

 Score =  373 bits (957), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/396 (47%), Positives = 254/396 (64%), Gaps = 7/396 (1%)

Query: 8   LTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRG 67
           + S Q C  TG F   S Y  NR L LSSL SNV+A  GFY S+IGQ PD VY L +C  
Sbjct: 19  VVSAQECGKTGFFVPQSRYETNRGLLLSSLPSNVSARGGFYNSSIGQGPDRVYALGMCIE 78

Query: 68  DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNH 127
            + P+ C+ C+ +    ++  C NQ E ++W      C+VRYSN SFFG L+ +P    H
Sbjct: 79  GAEPDVCSDCIEYASNLLLDTCLNQTEGLAWPEKRILCMVRYSNSSFFGSLKAEPHFYIH 138

Query: 128 NINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLK-FATEEANLTSSETIYALMQCTPDI 186
           N+++ITS+LT+FD++W  L  R++A  +S +SK K +A + A LT+ + IYALMQCTPD+
Sbjct: 139 NVDDITSNLTEFDQVWEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDL 198

Query: 187 SQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATAD-SLSPSPLSP-- 243
           S  DC  CLRQS+ D ++CC GK+G  V   SC+FRWE++PF  A +  SL+P P SP  
Sbjct: 199 SLEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEAFSRISLAPPPQSPAF 258

Query: 244 PSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADE 303
           P+    T T   KG  +IS G V  I++ T I +  ++  +  V  RRRK  Q    + +
Sbjct: 259 PTLPAVTNTATKKGSITISIGIVWAIIIPTVIVVFLVLLALGFVVYRRRKSYQG--SSTD 316

Query: 304 INTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL 363
           I    SLQFDF  I DATN FS  N +G+GGFG V+ G L +G E+A+KRLSK S QG  
Sbjct: 317 ITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAR 375

Query: 364 EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           EFKNEV++VA+L HRNLV+LLGF  EG E++L+YEF
Sbjct: 376 EFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEF 411

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9LDT0|CRK30_ARATH Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=3 SV=1

 Score =  350 bits (897), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 185/409 (45%), Positives = 258/409 (63%), Gaps = 15/409 (3%)

Query: 3   LSIIRLTSGQTCYDT-GNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYG 61
           +S+I + S Q C +  G FT   T+ KNR + LSSL S VTA  GFY ++IG  PD +Y 
Sbjct: 16  VSLIIVVSAQLCSEKFGTFTPGGTFDKNRRIILSSLPSEVTAQDGFYNASIGTDPDQLYA 75

Query: 62  LALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISW-GGMDFPCVVRYSNRSFFGKLEL 120
           + +C   +  + C  C+    R +++ CPNQ  AI W GG    C+ RY N+     L+L
Sbjct: 76  MGMCIPGAKQKLCRDCIMDVTRQLIQTCPNQTAAIHWSGGGKTVCMARYYNQPSSRPLDL 135

Query: 121 KPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLK-------FATEEANLTSS 173
           +   + +N+ N++++LT FDR+W  L+  ++ KASS + K         +A +E NLT+S
Sbjct: 136 ESVSIGYNVGNLSTNLTDFDRLWERLIAHMVTKASSASIKYLSFDNSRFYAADETNLTNS 195

Query: 174 ETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGA-T 232
           + +YALMQCTPD+S S+C  CL+QS+ D   CC+GK+G YV  PSCIFRW++YPF GA  
Sbjct: 196 QMVYALMQCTPDVSPSNCNTCLKQSVDDYVGCCHGKQGGYVYRPSCIFRWDLYPFNGAFD 255

Query: 233 ADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRR 292
             +L+P P S   +    T   +K  ++ +   ++I+V    I  +  + +  C   R R
Sbjct: 256 LLTLAPPPSSQLQSPPPVTNKDEKTIHTGTIIGIVIVVAMVIIMALLALGVSVC---RSR 312

Query: 293 KQKQDLTK--ADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIA 350
           K+ Q      AD+I TV  LQFD   I  AT+NF   NK+GQGGFG VYKG LS+G E+A
Sbjct: 313 KKYQAFASETADDITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVA 372

Query: 351 VKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           VKRLS+ S QGELEFKNEVLLVA+LQHRNLVRLLGF+ +G E++L++EF
Sbjct: 373 VKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEF 421

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9ZP16|CRK11_ARATH Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2

 Score =  349 bits (895), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 195/406 (48%), Positives = 251/406 (61%), Gaps = 19/406 (4%)

Query: 10  SGQTCY-DTGNFTTNSTYGKNRDLFLSSLASNVTANKG-FYTSTIGQIPDAVYGLALCRG 67
           S QTC  D G F  N TY  NR L LSSL SNVT   G +Y  +IGQ P+ VY + +C  
Sbjct: 23  SAQTCTTDKGTFRPNGTYDVNRRLILSSLPSNVTDQDGLYYNGSIGQQPNRVYAIGMCIP 82

Query: 68  DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNH 127
            ST E C+ C+       +KNCPNQ EA SW G    C VRYSN SF G  +L P     
Sbjct: 83  GSTSEDCSDCIKKESEFFLKNCPNQTEAYSWPGEPTLCYVRYSNTSFSGSADLNPRNWLT 142

Query: 128 NINNITSSLTQFDRIWRSLMDRVL-----AKASSGNSKLKFATEEANLTSSETIYALMQC 182
           N  ++ S+LT+F +IW  LM R++     AK++  +S   ++ + A LT    IYALMQC
Sbjct: 143 NTGDLDSNLTEFTKIWEGLMGRMISAASTAKSTPSSSDNHYSADSAVLTPLLNIYALMQC 202

Query: 183 TPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLS 242
           TPD+S  DCE CLRQS  D QSCC  K+G  V+ PSC  RW++Y +  A  D+L+ +   
Sbjct: 203 TPDLSSGDCENCLRQSAIDYQSCCSQKRGGVVMRPSCFLRWDLYTYSNA-FDNLTVASPP 261

Query: 243 PPSTTT--------DTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQ 294
           P    T        D  T  D  G  IS+G V+ I V T I I+ L+ L   +F RR+  
Sbjct: 262 PEPPVTVPQPAGDQDNPTNNDSKG--ISAGVVVAITVPTVIAILILLVLGFVLFRRRKSY 319

Query: 295 KQDLTKAD-EINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKR 353
           ++  T+++ +I+T +SL +DF TI  ATN FST NKLG+GGFGAVYKG+LS+G ++AVKR
Sbjct: 320 QRTKTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKR 379

Query: 354 LSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           LSK S QG  EF+NE +LV +LQHRNLVRLLGF  E  E++LIYEF
Sbjct: 380 LSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEF 425

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65476|CRK16_ARATH Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=3 SV=2

 Score =  333 bits (853), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 179/394 (45%), Positives = 237/394 (60%), Gaps = 8/394 (2%)

Query: 8   LTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRG 67
           ++S Q C  TG F  N  Y  NR L LSSLASNV+A  GFY ++IGQ PD +Y    C  
Sbjct: 23  ISSAQKCGKTGLFKPNDKYDINRHLLLSSLASNVSARGGFYNASIGQGPDRLYASGTCIQ 82

Query: 68  DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGM--DFPCVVRYSNRSFFGKLELKPTEV 125
            S PE C++C++     ++K C NQ EA+ W     ++PC++RYSNRSFFG LE+ P   
Sbjct: 83  GSEPELCSACIDSAFIRVIKKCHNQTEALDWSSFNEEYPCMIRYSNRSFFGLLEMTPFFK 142

Query: 126 NHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPD 185
           N+N  +   +LT+F + W +LM  V+A A S  +  KF          +T+YA + C+ D
Sbjct: 143 NYNATDFQVNLTEFYQKWEALMLGVIADAISSPNP-KFYGAGTGKIGIQTVYAFVLCSKD 201

Query: 186 ISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPS 245
           IS  +C  CLR ++ + +  C GK   +   PSC  RW++Y FYG      SP+    P 
Sbjct: 202 ISPWNCSRCLRGNVDNYKLSCSGKPRGHSFSPSCYMRWDLYQFYGFIEYRASPTL---PR 258

Query: 246 TTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEIN 305
                +   D GG  IS+  ++ I V+ + FI  L+ L   +  RRRK  Q+    ++I 
Sbjct: 259 EKGRISELSDDGGK-ISTRNILGITVALAFFITVLLVLGYAL-SRRRKAYQEFATENDIT 316

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEF 365
           T  SLQFDF  I  ATNNF   NKLG GGFG V+KG   +G E+AVKRLSK S QGE EF
Sbjct: 317 TSGSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEF 376

Query: 366 KNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           KNEVLLVA+LQHRNLVRLLGFS EG E++L+YE+
Sbjct: 377 KNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEY 410

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LDQ3|CRK35_ARATH Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=3

 Score =  320 bits (819), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/426 (42%), Positives = 257/426 (60%), Gaps = 46/426 (10%)

Query: 1   MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVY 60
            L+S+  +T+ + C+ +G F  NSTY  NR   LS+L+SNVT++ GF+ S  GQ P+ V+
Sbjct: 14  FLISLDSVTAQEICF-SGFFKPNSTYDLNRRQILSTLSSNVTSHNGFFNSKFGQAPNRVF 72

Query: 61  GLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLEL 120
              +C   + PE+C+ C+      + ++CPN+ +A +W      C+VRYSN SF G L +
Sbjct: 73  INGMCIPGTKPETCSDCIKGASDKISESCPNKTDAYTWPDC---CMVRYSNVSFSGSLVM 129

Query: 121 KPTEVNHNINNIT---SSLTQFDRIWRSLMDRVLAKASSGNSKLK------FATEEANLT 171
           +P+E  ++  +I    ++LT FDRIW  LM R +  AS  +S         FA E A+LT
Sbjct: 130 EPSETLYHTGDIEDTGTNLTVFDRIWEELMLRTITAASLSSSNGSSFGQKYFAAEVASLT 189

Query: 172 SSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGA 231
           + +T+YA+MQCTPD+S  DCEFCL+ S+ D +SCC GK+G  V+ PSC  RW++YP+ GA
Sbjct: 190 TFQTMYAMMQCTPDVSSKDCEFCLKTSVGDYESCCRGKQGGAVIRPSCFVRWDLYPYAGA 249

Query: 232 TAD----------------SLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSI 275
             +                SL P P+S            D+   +I    V I+V    I
Sbjct: 250 FENVTFPPPPPQSLPQPPVSLIPPPVS------------DRANTTIKGIIVAIVVPIIVI 297

Query: 276 FIIALVALVTCVFLRRRKQKQ--DLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQG 333
            +  +V LV C   RR+K  +  ++   DEI T  SLQF F TI  AT+ FS  N +G+G
Sbjct: 298 LVSLVVLLVVC---RRKKSYKTTEVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRG 354

Query: 334 GFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393
           GFG VY+G+LS G E+AVKRLSK S QG  EFKNE +LV++LQH+NLVRLLGF  EG E+
Sbjct: 355 GFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEK 414

Query: 394 LLIYEF 399
           +L+YEF
Sbjct: 415 ILVYEF 420

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65483|CRK24_ARATH Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=3 SV=2

 Score =  314 bits (805), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 174/394 (44%), Positives = 238/394 (60%), Gaps = 27/394 (6%)

Query: 9   TSGQTCYD-TGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRG 67
            S Q C + +G FT NSTY  NR + LSSL  NVTA  GFYT+ IG+ P+  YGL +C  
Sbjct: 18  VSAQVCLERSGFFTPNSTYDLNRRVLLSSLPLNVTAIDGFYTTWIGEHPNRAYGLGMCVP 77

Query: 68  DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNH 127
            +   SC+ C+      +++NC NQ EAI W      C+VRYSNRSF+  L ++    ++
Sbjct: 78  GTDAHSCSDCIILANARLLQNCTNQTEAIVWRIDRTVCLVRYSNRSFYSSLGMEILRSDN 137

Query: 128 NINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANL-TSSETIYALMQCTPDI 186
              +  ++LT  +  W +LM R++ +AS     L +A     L TS   IY  +QC+ D+
Sbjct: 138 YTRDFQANLTDLEITWEALMIRMIDQASY----LYYAAGIRKLETSISRIYGFVQCSRDL 193

Query: 187 SQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPST 246
           S  +C  CL+Q++ + +SCC G++G  +L PSC  RWE+YPF G   D++ P        
Sbjct: 194 SLQNCTKCLQQNVVEYRSCCRGRQGGIILRPSCFIRWELYPFLGL-FDNIRP-------- 244

Query: 247 TTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTK-ADEIN 305
                  + K G SIS+G ++ I+V      I L+AL   ++ RR+  K   TK AD+I 
Sbjct: 245 -------RQKDGKSISTGAIVAIIVVP----ILLLALGVGLWKRRKAYKTKTTKIADDIT 293

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEF 365
           T  SLQF+F  I  AT NF   NKLG GGFG VYKG   +G E+AVKRLSK S QGE EF
Sbjct: 294 TSGSLQFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEF 353

Query: 366 KNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           KNEV LVA+LQHRNLV+LLG++ +G E++L+YEF
Sbjct: 354 KNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEF 387

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LDN1|CRK33_ARATH Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1

 Score =  307 bits (787), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 176/407 (43%), Positives = 234/407 (57%), Gaps = 33/407 (8%)

Query: 1   MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVY 60
           +L+SII   S Q C +TG F    TY  NR   L+SLAS V  + GFY S+IG++PD V+
Sbjct: 15  VLISIIGAISSQQCNETGYFEPWKTYDTNRRQILTSLASKVVDHYGFYNSSIGKVPDEVH 74

Query: 61  GLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLEL 120
            + +C   + P  C+ CL      + +NCPNQ EA +W      C  RYSN SFF ++ L
Sbjct: 75  VMGMCIDGTEPTVCSDCLKVAADQLQENCPNQTEAYTWTPHKTLCFARYSNSSFFKRVGL 134

Query: 121 KPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSG-----NSKLKFATEEANLTSSET 175
            P  + H+  +I S+LT  + IW +L DR+++ ASS      +S+  +A    NLT+ + 
Sbjct: 135 HPLYMEHSNVDIKSNLTYLNTIWEALTDRLMSDASSDYNASLSSRRYYAANVTNLTNFQN 194

Query: 176 IYALMQCTPDISQSDCEFCLRQSMADLQSCCYGK---KGSYVLGPSCIFRWEMYPFYGAT 232
           IYALM CTPD+ +  C  CL +++++     YG    +   V  PSC FRW++YPF GA 
Sbjct: 195 IYALMLCTPDLEKGACHNCLEKAVSE-----YGNLRMQRGIVAWPSCCFRWDLYPFIGAF 249

Query: 233 ADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRR 292
             +LSP P S                 +IS G  + IVV+T + I  L  LV  +  R+R
Sbjct: 250 NLTLSPPPGS---------------KRNISVGFFVAIVVATGVVISVLSTLVVVLVCRKR 294

Query: 293 KQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVK 352
           K     T   E +   SLQ+D  TI  AT  FS  N LGQGGFG V+KG L  G EIAVK
Sbjct: 295 K-----TDPPEESPKYSLQYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVK 349

Query: 353 RLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           RLSK S QG  EF+NE  LVA+LQHRNLV +LGF  EG E++L+YEF
Sbjct: 350 RLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8L710|CRK17_ARATH Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2

 Score =  307 bits (787), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 189/419 (45%), Positives = 251/419 (59%), Gaps = 29/419 (6%)

Query: 5   IIRLTSGQTCYDT-GNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLA 63
           +I +++ QTC +T G+F  NSTY  NR L LS+ ASNVTA  G++  + G   D VY + 
Sbjct: 21  VISVSAQQTCDNTAGSFKPNSTYDNNRRLLLSTFASNVTAQNGYFNGSFGLGTDRVYAMG 80

Query: 64  LCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPT 123
           +C   + P+ C++C+  T   +++ C NQ +  SW G +  C+VRYSN+SF G L L+P+
Sbjct: 81  MCAPGAEPDVCSNCIKNTAEGLLQICLNQTDGFSWSGEETLCLVRYSNKSFSGLLGLEPS 140

Query: 124 EVNHNINNI-TSSLTQFDRIWRSLMDRVLAKASSGN---------SKLKFATEEANLTSS 173
               N+N I      +FD ++  LM R +  ASS           S   +A + A     
Sbjct: 141 NDFFNVNEIRKEDQKEFDSVFDELMFRTIQGASSSVRNNSNSLSLSGKYYAKDVAPEPVY 200

Query: 174 ETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATA 233
             I  +MQCTPD+S  DC  CL +S+   +    GK+G+ +L PSC FRWE+Y F+GA  
Sbjct: 201 GNISVVMQCTPDVSSKDCNLCLERSLDFYKKWYNGKRGTIILRPSCFFRWELYTFFGA-F 259

Query: 234 DSLSP------------SPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALV 281
           DS++              PL  PS T  T  TK K  + IS GT+  IVV   + II +V
Sbjct: 260 DSINARHPPPPPRPLSPPPLKTPSVTNQTNITK-KNDSRISGGTIAAIVVVVVVTIILIV 318

Query: 282 -ALVTCVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYK 340
             LV C   +RRKQKQ++     +N  ES+QFD  TI  AT NFS  NKLG GGFG VYK
Sbjct: 319 VGLVIC---KRRKQKQEIELPIVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYK 375

Query: 341 GRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           G L +G EIAVKRLSK S QGE+EFKNEV++VA+LQH NLVRLLGFS +G E+LL+YEF
Sbjct: 376 GMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEF 434

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1

 Score =  303 bits (776), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 239/396 (60%), Gaps = 13/396 (3%)

Query: 12  QTCYD-TGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDST 70
           Q C + TGNFT N+ Y  N D  +SSL+S      GFY  ++G   + V  ++ CRGD  
Sbjct: 29  QICSNVTGNFTVNTPYAVNLDRLISSLSSLRRNVNGFYNISVGDSDEKVNSISQCRGDVK 88

Query: 71  PESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNIN 130
            E C +C+    + ++  CP QKEAI W      C  RYSNR+ F +LE+ P        
Sbjct: 89  LEVCINCIAMAGKRLVTLCPVQKEAIIWYD---KCTFRYSNRTIFNRLEISPHTSITGTR 145

Query: 131 NITSSLTQFDRIWRSLMDRVLAKASS-GNSKLKFATEEANLTSSETIYALMQCTPDISQS 189
           N T     +++  R L++ +  +AS  G SK  F   E +  S +T++ L+QCTPDIS+ 
Sbjct: 146 NFTGDRDSWEKSLRGLLEGLKNRASVIGRSKKNFVVGETSGPSFQTLFGLVQCTPDISEE 205

Query: 190 DCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGAT----ADSLSPSPLSPPS 245
           DC +CL Q +A + SCC  K GSYV+ PSC+  +  + FY         S+  +P  PP 
Sbjct: 206 DCSYCLSQGIAKIPSCCDMKMGSYVMSPSCMLAYAPWRFYDPVDTDDPSSVPATPSRPPK 265

Query: 246 TTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEIN 305
             T + T  DK  N      +I    S +I ++ +V LV  + LRR++  ++     E  
Sbjct: 266 NETRSVTQGDK--NRGVPKALIFASASVAIVVLFIVLLVVFLKLRRKENIRNSENKHENE 323

Query: 306 TV--ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL 363
            +  +S++FDFS ++DAT++FS +NKLG+GGFGAVYKG LS GQ+IAVKRLSKN+ QGE 
Sbjct: 324 NISTDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGET 383

Query: 364 EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           EFKNE LLVA+LQHRNLV+LLG+S EGTERLL+YEF
Sbjct: 384 EFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEF 419

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9XEC7|CRK37_ARATH Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=3 SV=1

 Score =  303 bits (776), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 173/405 (42%), Positives = 237/405 (58%), Gaps = 21/405 (5%)

Query: 8   LTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIP--DAVYGLALC 65
           + +G  CY  G+F  N  YG +R    SSL SNV +N GFY ++ G+    + V+ +ALC
Sbjct: 24  VHAGFICY--GDFF-NVNYGVSRTYLFSSLPSNVVSNGGFYNASFGRDSKNNRVHVVALC 80

Query: 66  RGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDF---PCVVRYSNRSFFGKLELKP 122
           R     ++C +CL   + D    CP QKE+ SW   +F    C +RY+N S  GKLEL P
Sbjct: 81  RRGYEKQACKTCLEHVIEDTKSKCPRQKESFSWVTDEFDDVSCSLRYTNHSTLGKLELLP 140

Query: 123 TEVNHNINNITS---SLTQFDRIWRSLMDRVLAKASSG--NSKLKF-ATEEANLTSSETI 176
             +N N N+I S   ++  F + W ++++R L  AS+   +S LK+ +      T    +
Sbjct: 141 NTINPNPNSIDSKFNNMAMFSQEWIAMVNRTLEAASTAENSSVLKYYSATRTEFTQISDV 200

Query: 177 YALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSL 236
           YALMQC PD+S  +C+ CLR+ + D Q   +G++G  V  PSC FRW++YP+Y A  D++
Sbjct: 201 YALMQCVPDLSPGNCKRCLRECVNDFQKQFWGRQGGGVSRPSCYFRWDLYPYYRA-FDNV 259

Query: 237 SPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQ 296
              P +PP   + T     +   S     + IIVV +   +I L+  V  +F  +RKQ  
Sbjct: 260 VRVP-APPPQASSTIIDYGRDEKSFQGSNIAIIVVPS---VINLIIFVVLIFSWKRKQSH 315

Query: 297 DLTKA--DEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL 354
            +     D  N    L+FD   I  ATNNFS +NKLGQGGFG+VYKG L  GQEIAVKRL
Sbjct: 316 TIINDVFDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRL 375

Query: 355 SKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
            K S QG +EFKNEVLL+ RLQHRNLV+LLGF  E  E +L+YEF
Sbjct: 376 RKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEF 420

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
224116134	668	predicted protein [Populus trichocarpa]	0.979	0.585	0.549	1e-116
224113947	645	predicted protein [Populus trichocarpa]	0.969	0.6	0.541	1e-114
224113951	645	predicted protein [Populus trichocarpa]	0.969	0.6	0.539	1e-114
224113943	641	predicted protein [Populus trichocarpa]	0.929	0.578	0.511	1e-110
255555037	643	kinase, putative [Ricinus communis] gi|2	0.929	0.576	0.497	1e-101
240256045	728	cysteine-rich receptor-like protein kina	0.974	0.534	0.479	1e-101
152013439	658	RecName: Full=Cysteine-rich receptor-lik	0.974	0.591	0.479	1e-100
356575765	666	PREDICTED: cysteine-rich receptor-like p	0.964	0.578	0.485	4e-98
356575763	665	PREDICTED: cysteine-rich receptor-like p	0.962	0.577	0.487	2e-97
356534248	661	PREDICTED: cysteine-rich receptor-like p	0.949	0.573	0.481	2e-97

>gi|224116134|ref|XP_002317220.1| predicted protein [Populus trichocarpa] gi|222860285|gb|EEE97832.1| predicted protein [Populus trichocarpa]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/402 (54%), Positives = 276/402 (68%), Gaps = 11/402 (2%)

Query: 6   IRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALC 65
           I LT  + CY+TGNFT NSTY KNRDL L SLASNVTAN GFY +TIG   D VYGL LC
Sbjct: 18  ITLTGAEVCYNTGNFTANSTYAKNRDLVLRSLASNVTANGGFYNTTIGLGNDTVYGLVLC 77

Query: 66  RGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEV 125
               + E C+SC+N  ++ +M  CPNQKEAISWGG   PC+V Y+NR FFG LE  P+  
Sbjct: 78  MASPSAEICSSCVNSAIQTLMAACPNQKEAISWGGNPLPCIVHYANRYFFGSLEPSPSSA 137

Query: 126 NHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPD 185
            +N   + ++  QFD+ W  L + V  KAS+ +S+L    E A+L+S++ IY  MQCTPD
Sbjct: 138 FYNTGILDATFRQFDQFWSGLGETV-TKASTASSRLMPVAETADLSSTQKIYVFMQCTPD 196

Query: 186 ISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYG--------ATADSLS 237
           +S S+C  CL+QS+   +SCCYG KG     P+C FRW++YPFY           + S S
Sbjct: 197 VSPSNCSVCLQQSVDYYKSCCYGHKGGGAQKPNCFFRWDLYPFYDLFPQVTSPPPSPSPS 256

Query: 238 PSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQD 297
           PSP    S+   T TT  KG  + +S TVI+ +V T+IF +ALV L+  VF R RK KQ+
Sbjct: 257 PSPPFVISSPPPTNTTIRKGKENTASRTVIVTIVPTAIF-LALVILILTVF-RFRKPKQE 314

Query: 298 LTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357
           +   DEI+  + L+F F+TI+ ATN+FS DNKLGQGGFGAVYKG L+ GQ IAVKRLS N
Sbjct: 315 VENFDEISIAKCLEFKFATIKLATNDFSDDNKLGQGGFGAVYKGILADGQAIAVKRLSSN 374

Query: 358 SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           S QGE+EFKNEV L+A+L HRNLVRLLGF  EGTE+LLIYEF
Sbjct: 375 SGQGEVEFKNEVRLLAKLDHRNLVRLLGFCLEGTEKLLIYEF 416

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113947|ref|XP_002316623.1| predicted protein [Populus trichocarpa] gi|222859688|gb|EEE97235.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/395 (54%), Positives = 272/395 (68%), Gaps = 8/395 (2%)

Query: 6   IRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALC 65
           I LT  + CY+TGNFT NSTY KNRDL L SLASNVTAN GFY +TIG   D VYGL  C
Sbjct: 18  ITLTGAEVCYNTGNFTANSTYAKNRDLVLRSLASNVTANGGFYNTTIGLGNDTVYGLVFC 77

Query: 66  RGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEV 125
               + E C+SC+N  ++ +M  CPNQKEAISWGG   PC+V Y+NR F G LEL PT+ 
Sbjct: 78  MASPSAEICSSCVNSAIQTLMAACPNQKEAISWGGNPVPCIVHYANRYFLGSLELSPTDA 137

Query: 126 NHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPD 185
            +N   +  S  QF +IW  LM   +  AS+G+S+ K A E A+L+S++ IY  MQCTPD
Sbjct: 138 GYNTGILDPSFRQFLQIWSGLMTDTVTIASTGSSRFKLAAETADLSSTQKIYVFMQCTPD 197

Query: 186 ISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPS 245
           +S S+C  CL+ S+   +SCC G +G Y   P+C+FRW++YPFY     +L P   SP  
Sbjct: 198 VSPSNCRDCLQHSVDYYKSCCNGYQGGYAQKPNCVFRWDLYPFY-----NLFPQVTSPSP 252

Query: 246 TTTDTTTTK-DKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEI 304
           ++   T T   KG  + +S TVI+ +V TSIF +ALV L+  +F R RK KQ++   DE 
Sbjct: 253 SSPPPTNTTIRKGKENNASRTVIVTIVPTSIF-LALVILILTIF-RFRKPKQEVKNFDEN 310

Query: 305 NTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELE 364
           ++ +  +F F+TI+ ATN+FS DNKLGQGGFGAVYKG L+ GQ IAVKRLS NS QG +E
Sbjct: 311 SSTKCWEFKFATIKLATNDFSDDNKLGQGGFGAVYKGILADGQAIAVKRLSSNSGQGAVE 370

Query: 365 FKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           F+NEV L+A+L HRNLVRLLGF  EGTE+LLIYEF
Sbjct: 371 FRNEVGLLAKLAHRNLVRLLGFCLEGTEKLLIYEF 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113951|ref|XP_002316624.1| predicted protein [Populus trichocarpa] gi|222859689|gb|EEE97236.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/395 (53%), Positives = 273/395 (69%), Gaps = 8/395 (2%)

Query: 6   IRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALC 65
           I LT  + CY+TGNFT NSTY KNRDL L SLASNVTAN GFY +TIG   D VYGL  C
Sbjct: 18  ITLTGAEVCYNTGNFTANSTYAKNRDLVLRSLASNVTANGGFYNTTIGLGNDTVYGLVFC 77

Query: 66  RGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEV 125
              ++ E C+SC+N  ++ +M  CPNQKEAISWGG   PC+V Y+NR F G LEL PT+ 
Sbjct: 78  MASASAEICSSCVNSAIQTLMAACPNQKEAISWGGNPVPCIVHYANRYFLGSLELSPTDA 137

Query: 126 NHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPD 185
            +N   +  S  QF +IW  LM   +  AS+G+S+ K A E A+L+S++ IY  MQCTPD
Sbjct: 138 GYNTGILDPSFRQFLQIWSGLMTDTVTIASTGSSRFKLAAETADLSSTQKIYVFMQCTPD 197

Query: 186 ISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPS 245
           +S S+C  CL+ S+   +SCC G +G Y   P+C+FRW++YPFY     +L P   SP  
Sbjct: 198 VSPSNCRDCLQHSVDYYKSCCNGYQGGYAQKPNCVFRWDLYPFY-----NLFPQVTSPSP 252

Query: 246 TTTDTTTTK-DKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEI 304
           ++   T T   KG  + +S TVI+ +V TSIF +ALV L+  +F R RK KQ++   DE 
Sbjct: 253 SSPPPTNTTIRKGKENNASRTVIVTIVPTSIF-LALVILILTIF-RFRKPKQEVKNFDEN 310

Query: 305 NTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELE 364
           ++ +  +F F+TI+ ATN+FS DNKLGQGGFGAVYKG ++ GQ IAVKRLS NS QG +E
Sbjct: 311 SSTKCWEFKFATIKLATNDFSDDNKLGQGGFGAVYKGIIADGQAIAVKRLSSNSGQGAVE 370

Query: 365 FKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           F+NEV L+A+L HRNLVRLLGF  EGTE+LLIYEF
Sbjct: 371 FRNEVGLLAKLAHRNLVRLLGFCLEGTEKLLIYEF 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113943|ref|XP_002316622.1| predicted protein [Populus trichocarpa] gi|222859687|gb|EEE97234.1| predicted protein [Populus trichocarpa]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/401 (51%), Positives = 262/401 (65%), Gaps = 30/401 (7%)

Query: 1   MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVY 60
           +++  I LT  + CY+TGNFT NSTY KNRDL L SLASNVT N GFY +TIG   D VY
Sbjct: 13  VIIVSITLTGAEVCYNTGNFTANSTYAKNRDLVLRSLASNVTNNGGFYNTTIGLGNDTVY 72

Query: 61  GLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLEL 120
           GL LC    + E+C+ C++  ++ +   CPNQKEAISWGG   PC+V Y+NR F G LE 
Sbjct: 73  GLVLCMASPSAENCSRCVSSAIQTLTAGCPNQKEAISWGGNPLPCIVHYANRYFLGSLEQ 132

Query: 121 KPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALM 180
            P  + +N+  + ++  QF++ W  L + V   AS+G+S+L  A E A+L S++  Y  M
Sbjct: 133 SPNSILYNVGILDATFRQFEQFWSGLGETV-KNASTGSSRLMPAVETADLPSNQKAYVFM 191

Query: 181 QCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSP 240
           QCTPD+S S+C  CL+QS+ D  SCCYG +G  V  P+C+FRW++               
Sbjct: 192 QCTPDVSPSNCSVCLQQSVNDYXSCCYGHQGGIVQKPNCVFRWDL--------------- 236

Query: 241 LSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQ--KQDL 298
                    T     K  N++    +I+I V  ++  + LV +  C+F+R RKQ  K+ +
Sbjct: 237 --------ATLVYAGKKSNTVR---IIVITVVPAVGAVILV-ICMCLFIRTRKQREKERI 284

Query: 299 TKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS 358
              DEI + ESLQF FSTIRDAT +FS  NKLGQGGFGAVYKG L  GQEIAVKRLSK+S
Sbjct: 285 ETGDEIESAESLQFAFSTIRDATEDFSEKNKLGQGGFGAVYKGALPSGQEIAVKRLSKDS 344

Query: 359 VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
            QG+LEFKNEVLLVARLQHRNLVRLLGF  +G ERLLIYEF
Sbjct: 345 GQGDLEFKNEVLLVARLQHRNLVRLLGFCLQGIERLLIYEF 385

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555037|ref|XP_002518556.1| kinase, putative [Ricinus communis] gi|223542401|gb|EEF43943.1| kinase, putative [Ricinus communis]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/410 (49%), Positives = 271/410 (66%), Gaps = 39/410 (9%)

Query: 2   LLSIIRLTSGQT-CYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVY 60
            L  I L  GQT CYDTGNFT N TY KNR L LSSL SNVTAN GFYT+++GQ  D VY
Sbjct: 13  FLQFISLARGQTVCYDTGNFTNNGTYAKNRGLLLSSLTSNVTANGGFYTTSVGQDSDKVY 72

Query: 61  GLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFP-CVVRYSNRSFFGKLE 119
           GL +CR DST E+C+ C++  ++D++  CPNQKEAI WGG  +P C++RY++R   GK+E
Sbjct: 73  GLVMCRPDSTEEACSDCVSSGIQDIVTTCPNQKEAILWGGGKYPPCIIRYADRPISGKME 132

Query: 120 LKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYAL 179
           L P++  +N  N+TS + +F++IW +LM++V  KAS+G+SK+K AT +ANLT  + IY L
Sbjct: 133 LDPSQSGYNTANLTSDIEEFNQIWSNLMEQVGTKASTGSSKIKAATGKANLTLFQNIYVL 192

Query: 180 MQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPS 239
           MQCTPD+SQS C +CL+Q++A+ +SCC+GK G Y + PSC FRW++Y FY   ADS  PS
Sbjct: 193 MQCTPDLSQSSCNYCLQQAVANYRSCCFGKVGGYTIKPSCWFRWDLYIFYTPIADSPQPS 252

Query: 240 P----LSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQK 295
           P       P  +  +   +DK    I+S TV+IIVV    F++ ++++ +   L  R + 
Sbjct: 253 PHYLPSPLPLPSPTSPIVRDK--KDIASRTVVIIVVPVVSFLVLVLSIYS---LLTRNKP 307

Query: 296 QDLT-----KADEIN-TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEI 349
           + LT     + D+I+ T ESLQFD  TIR                      GRL  G  I
Sbjct: 308 RKLTESVCERTDDISTTAESLQFDIGTIR----------------------GRLPDGVTI 345

Query: 350 AVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           AVKR S+ S QGE+EFKNEVLL+A LQH+NLVRLLGF  E  E+LLIYEF
Sbjct: 346 AVKRWSRYSKQGEVEFKNEVLLMAMLQHKNLVRLLGFCLEEKEKLLIYEF 395

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240256045|ref|NP_567680.4| cysteine-rich receptor-like protein kinase 14 [Arabidopsis thaliana] gi|332659325|gb|AEE84725.1| cysteine-rich receptor-like protein kinase 14 [Arabidopsis thaliana]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/396 (47%), Positives = 254/396 (64%), Gaps = 7/396 (1%)

Query: 8   LTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRG 67
           + S Q C  TG F   S Y  NR L LSSL SNV+A  GFY S+IGQ PD VY L +C  
Sbjct: 89  VVSAQECGKTGFFVPQSRYETNRGLLLSSLPSNVSARGGFYNSSIGQGPDRVYALGMCIE 148

Query: 68  DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNH 127
            + P+ C+ C+ +    ++  C NQ E ++W      C+VRYSN SFFG L+ +P    H
Sbjct: 149 GAEPDVCSDCIEYASNLLLDTCLNQTEGLAWPEKRILCMVRYSNSSFFGSLKAEPHFYIH 208

Query: 128 NINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLK-FATEEANLTSSETIYALMQCTPDI 186
           N+++ITS+LT+FD++W  L  R++A  +S +SK K +A + A LT+ + IYALMQCTPD+
Sbjct: 209 NVDDITSNLTEFDQVWEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDL 268

Query: 187 SQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATAD-SLSPSPLSP-- 243
           S  DC  CLRQS+ D ++CC GK+G  V   SC+FRWE++PF  A +  SL+P P SP  
Sbjct: 269 SLEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEAFSRISLAPPPQSPAF 328

Query: 244 PSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADE 303
           P+    T T   KG  +IS G V  I++ T I +  ++  +  V  RRRK  Q    + +
Sbjct: 329 PTLPAVTNTATKKGSITISIGIVWAIIIPTVIVVFLVLLALGFVVYRRRKSYQG--SSTD 386

Query: 304 INTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL 363
           I    SLQFDF  I DATN FS  N +G+GGFG V+ G L +G E+A+KRLSK S QG  
Sbjct: 387 ITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAR 445

Query: 364 EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           EFKNEV++VA+L HRNLV+LLGF  EG E++L+YEF
Sbjct: 446 EFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEF 481

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|152013439|sp|Q8H199.2|CRK14_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 14; Short=Cysteine-rich RLK14; Flags: Precursor

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/396 (47%), Positives = 254/396 (64%), Gaps = 7/396 (1%)

Query: 8   LTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRG 67
           + S Q C  TG F   S Y  NR L LSSL SNV+A  GFY S+IGQ PD VY L +C  
Sbjct: 19  VVSAQECGKTGFFVPQSRYETNRGLLLSSLPSNVSARGGFYNSSIGQGPDRVYALGMCIE 78

Query: 68  DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNH 127
            + P+ C+ C+ +    ++  C NQ E ++W      C+VRYSN SFFG L+ +P    H
Sbjct: 79  GAEPDVCSDCIEYASNLLLDTCLNQTEGLAWPEKRILCMVRYSNSSFFGSLKAEPHFYIH 138

Query: 128 NINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLK-FATEEANLTSSETIYALMQCTPDI 186
           N+++ITS+LT+FD++W  L  R++A  +S +SK K +A + A LT+ + IYALMQCTPD+
Sbjct: 139 NVDDITSNLTEFDQVWEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDL 198

Query: 187 SQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATAD-SLSPSPLSP-- 243
           S  DC  CLRQS+ D ++CC GK+G  V   SC+FRWE++PF  A +  SL+P P SP  
Sbjct: 199 SLEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEAFSRISLAPPPQSPAF 258

Query: 244 PSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADE 303
           P+    T T   KG  +IS G V  I++ T I +  ++  +  V  RRRK  Q    + +
Sbjct: 259 PTLPAVTNTATKKGSITISIGIVWAIIIPTVIVVFLVLLALGFVVYRRRKSYQG--SSTD 316

Query: 304 INTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL 363
           I    SLQFDF  I DATN FS  N +G+GGFG V+ G L +G E+A+KRLSK S QG  
Sbjct: 317 ITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAR 375

Query: 364 EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           EFKNEV++VA+L HRNLV+LLGF  EG E++L+YEF
Sbjct: 376 EFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEF 411

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575765|ref|XP_003556007.1| PREDICTED: cysteine-rich receptor-like protein kinase 29-like isoform 2 [Glycine max]

 Score =  364 bits (935), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 195/402 (48%), Positives = 267/402 (66%), Gaps = 17/402 (4%)

Query: 5   IIRLTSGQT-C-YDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGL 62
           II   S QT C  D GN+T NSTY  N +  LS+ +S+     GFY  + GQ PD VY +
Sbjct: 19  IISQASAQTNCDNDKGNYTINSTYHSNLNTLLSNFSSHTDIYYGFYNFSYGQDPDKVYAI 78

Query: 63  ALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKP 122
            LCRGD  P+ C  CLN +   +   CPNQKEAI+W G    C++RYSNRS FG++E +P
Sbjct: 79  GLCRGDQNPDQCLKCLNESRVSLADECPNQKEAINWRG---ECMLRYSNRSIFGRMENQP 135

Query: 123 TEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQC 182
           T     + N+T S+ +F+ +  SLM  + + A+SG+S+ K+AT        +T Y   QC
Sbjct: 136 TSRIVYLKNVTGSVDEFNDVLESLMRNLSSTAASGDSRRKYATGSKPAPDFQTTYGYTQC 195

Query: 183 TPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLS 242
           TPD+S  DC  CL ++++D+ +   GK G  VL PSC  R++ Y +YG T   L   P +
Sbjct: 196 TPDLSSEDCTTCLGEAISDIPNYFNGKAGGNVLKPSCRIRFDPYSYYGPT---LKLDPDA 252

Query: 243 PPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRK-QKQDLTKA 301
            P+ T +T++++++ GN+    + III +   +  + LV ++ C++LR RK +KQ+ +K 
Sbjct: 253 SPTMTNNTSSSQERKGNT----SRIIIAIVVPVASVVLVLILFCIYLRARKSRKQNESKE 308

Query: 302 D----EINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357
           D    EI+  ESLQFDF TIR ATN F+  NK+GQGGFGAVY+G+LS+GQEIAVKRLS++
Sbjct: 309 DNNEDEISFAESLQFDFDTIRVATNEFADCNKIGQGGFGAVYRGQLSNGQEIAVKRLSRD 368

Query: 358 SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           S QG++EFKNEVLLVA+LQHRNLVRLLGF  EGTERLL+YEF
Sbjct: 369 SGQGDMEFKNEVLLVAKLQHRNLVRLLGFCLEGTERLLVYEF 410

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575763|ref|XP_003556006.1| PREDICTED: cysteine-rich receptor-like protein kinase 29-like isoform 1 [Glycine max]

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 196/402 (48%), Positives = 264/402 (65%), Gaps = 18/402 (4%)

Query: 5   IIRLTSGQT-C-YDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGL 62
           II   S QT C  D GN+T NSTY  N +  LS+ +S+     GFY  + GQ PD VY +
Sbjct: 19  IISQASAQTNCDNDKGNYTINSTYHSNLNTLLSNFSSHTDIYYGFYNFSYGQDPDKVYAI 78

Query: 63  ALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKP 122
            LCRGD  P+ C  CLN +   +   CPNQKEAI+W G    C++RYSNRS FG++E +P
Sbjct: 79  GLCRGDQNPDQCLKCLNESRVSLADECPNQKEAINWRG---ECMLRYSNRSIFGRMENQP 135

Query: 123 TEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQC 182
           T     + N+T S+ +F+ +  SLM  + + A+SG+S+ K+AT        +T Y   QC
Sbjct: 136 TSRIVYLKNVTGSVDEFNDVLESLMRNLSSTAASGDSRRKYATGSKPAPDFQTTYGYTQC 195

Query: 183 TPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLS 242
           TPD+S  DC  CL ++++D+ +   GK G  VL PSC  R++ Y +YG T   L   P +
Sbjct: 196 TPDLSSEDCTTCLGEAISDIPNYFNGKAGGNVLKPSCRIRFDPYSYYGPT---LKLDPDA 252

Query: 243 PPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRK-QKQDLTKA 301
            P+ T +T++++ KG  S      III +   +  + LV ++ C++LR RK +KQ+ +K 
Sbjct: 253 SPTMTNNTSSSQGKGNTS-----RIIIAIVVPVASVVLVLILFCIYLRARKSRKQNESKE 307

Query: 302 D----EINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357
           D    EI+  ESLQFDF TIR ATN F+  NK+GQGGFGAVY+G+LS+GQEIAVKRLS++
Sbjct: 308 DNNEDEISFAESLQFDFDTIRVATNEFADCNKIGQGGFGAVYRGQLSNGQEIAVKRLSRD 367

Query: 358 SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           S QG++EFKNEVLLVA+LQHRNLVRLLGF  EGTERLL+YEF
Sbjct: 368 SGQGDMEFKNEVLLVAKLQHRNLVRLLGFCLEGTERLLVYEF 409

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534248|ref|XP_003535669.1| PREDICTED: cysteine-rich receptor-like protein kinase 26-like [Glycine max]

 Score =  362 bits (928), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 255/397 (64%), Gaps = 18/397 (4%)

Query: 10  SGQTC-YDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGD 68
           + QTC  DTGN+T NSTY  N +  LSS +S+   N GFY  + GQ PD VY + LCRGD
Sbjct: 23  AAQTCDNDTGNYTVNSTYHNNLNTLLSSFSSHKEINYGFYNFSHGQDPDRVYAIGLCRGD 82

Query: 69  STPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKP-TEVNH 127
             P+ C  CLN +   + K CPNQK AI WG     C++RYSNRS F  +E +P  E+ +
Sbjct: 83  QKPDDCLKCLNNSRVSLAKECPNQKHAIDWG---IECMLRYSNRSIFSLMETQPMVELVY 139

Query: 128 NINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDIS 187
            ++ +  S+ QF+   +SLM  +   A+SG+S+LK+AT      S +TI+   QCTPD+S
Sbjct: 140 TLD-VKGSVEQFNEALQSLMRNLTRTAASGDSRLKYATASTPAPSFQTIFGYTQCTPDLS 198

Query: 188 QSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGATADSLSPSPLSPPSTT 247
             DC  CL ++++ +  CC GK G  VL PSC  R++ Y FYG T   L     +P  +T
Sbjct: 199 SEDCTKCLEEAISKIPECCSGKAGGNVLKPSCRIRFDPYVFYGPT---LKLDSDAPSVST 255

Query: 248 TDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFL-----RRRKQKQDLTKAD 302
             T+++  K  N+  S T+I I V  +  ++AL     C++L     R++ +K++ +  D
Sbjct: 256 NKTSSSPGKSNNT--SRTIIAIAVPVASVVLALSLF--CIYLTVRKPRKKTEKEEDSHED 311

Query: 303 EINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGE 362
           EI   ESLQF+F TIR ATN F   NKLGQGGFGAVY+GRLS+GQ IAVKRLS++S QG 
Sbjct: 312 EITISESLQFNFDTIRVATNEFDDSNKLGQGGFGAVYRGRLSNGQVIAVKRLSRDSGQGN 371

Query: 363 LEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           +EFKNEVLL+ +LQHRNLVRLLGF  EG ERLL+YEF
Sbjct: 372 MEFKNEVLLLVKLQHRNLVRLLGFCVEGRERLLVYEF 408

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
TAIR|locus:2123116	700	CRK30 "cysteine-rich RLK (RECE	0.992	0.565	0.444	1.4e-87
TAIR|locus:2121691	667	CRK11 "cysteine-rich RLK (RECE	0.548	0.328	0.469	4.4e-86
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.563	0.336	0.428	1.7e-84
TAIR|locus:2141762	665	CRK26 "cysteine-rich RLK (RECE	0.538	0.323	0.390	8.5e-76
TAIR|locus:2121606	673	CRK13 "cysteine-rich RLK (RECE	0.571	0.338	0.400	3.4e-74
TAIR|locus:2123071	636	CRK33 "cysteine-rich RLK (RECE	0.571	0.358	0.404	4.1e-73
TAIR|locus:2121711	660	CRK22 "cysteine-rich RLK (RECE	0.571	0.345	0.399	5e-73
TAIR|locus:2137144	646	CRK37 "cysteine-rich RLK (RECE	0.543	0.335	0.393	1.7e-72
TAIR|locus:2123056	656	CRK32 "cysteine-rich RLK (RECE	0.543	0.330	0.363	2.4e-72
TAIR|locus:2123126	666	CRK31 "cysteine-rich RLK (RECE	0.548	0.328	0.385	3e-72

TAIR|locus:2123116 CRK30 "cysteine-rich RLK (RECEPTOR-like protein kinase) 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 181/407 (44%), Positives = 245/407 (60%)

Query:     3 LSIIRLTSGQTCYDT-GNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYG 61
             +S+I + S Q C +  G FT   T+ KNR + LSSL S VTA  GFY ++IG  PD +Y 
Sbjct:    16 VSLIIVVSAQLCSEKFGTFTPGGTFDKNRRIILSSLPSEVTAQDGFYNASIGTDPDQLYA 75

Query:    62 LALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISW-GGMDFPCVVRYSNRSFFGKLEL 120
             + +C   +  + C  C+    R +++ CPNQ  AI W GG    C+ RY N+     L+L
Sbjct:    76 MGMCIPGAKQKLCRDCIMDVTRQLIQTCPNQTAAIHWSGGGKTVCMARYYNQPSSRPLDL 135

Query:   121 KPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSK-LKF------ATEEANLTSS 173
             +   + +N+ N++++LT FDR+W  L+  ++ KASS + K L F      A +E NLT+S
Sbjct:   136 ESVSIGYNVGNLSTNLTDFDRLWERLIAHMVTKASSASIKYLSFDNSRFYAADETNLTNS 195

Query:   174 ETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYGXXX 233
             + +YALMQCTPD+S S+C  CL+QS+ D   CC+GK+G YV  PSCIFRW++YPF G   
Sbjct:   196 QMVYALMQCTPDVSPSNCNTCLKQSVDDYVGCCHGKQGGYVYRPSCIFRWDLYPFNGAFD 255

Query:   234 XXXXXXXXXXXXXXXXXXXXKDKGGNXXXXXXXXXXXXXXXXXXXALVALVTCVFLRRRK 293
                                 KD+                      AL+AL   V   R+K
Sbjct:   256 LLTLAPPPSSQLQSPPPVTNKDEK-TIHTGTIIGIVIVVAMVIIMALLALGVSVCRSRKK 314

Query:   294 QKQDLTK-ADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVK 352
              +   ++ AD+I TV  LQFD   I  AT+NF   NK+GQGGFG VYKG LS+G E+AVK
Sbjct:   315 YQAFASETADDITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVK 374

Query:   353 RLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
             RLS+ S QGELEFKNEVLLVA+LQHRNLVRLLGF+ +G E++L++EF
Sbjct:   375 RLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEF 421

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121691 CRK11 "cysteine-rich RLK (RECEPTOR-like protein kinase) 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
 Identities = 106/226 (46%), Positives = 134/226 (59%)

Query:    10 SGQTCY-DTGNFTTNSTYGKNRDLFLSSLASNVTANKG-FYTSTIGQIPDAVYGLALCRG 67
             S QTC  D G F  N TY  NR L LSSL SNVT   G +Y  +IGQ P+ VY + +C  
Sbjct:    23 SAQTCTTDKGTFRPNGTYDVNRRLILSSLPSNVTDQDGLYYNGSIGQQPNRVYAIGMCIP 82

Query:    68 DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNH 127
              ST E C+ C+       +KNCPNQ EA SW G    C VRYSN SF G  +L P     
Sbjct:    83 GSTSEDCSDCIKKESEFFLKNCPNQTEAYSWPGEPTLCYVRYSNTSFSGSADLNPRNWLT 142

Query:   128 NINNITSSLTQFDRIWRSLMDRVL-----AKASSGNSKLKFATEEANLTSSETIYALMQC 182
             N  ++ S+LT+F +IW  LM R++     AK++  +S   ++ + A LT    IYALMQC
Sbjct:   143 NTGDLDSNLTEFTKIWEGLMGRMISAASTAKSTPSSSDNHYSADSAVLTPLLNIYALMQC 202

Query:   183 TPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPF 228
             TPD+S  DCE CLRQS  D QSCC  K+G  V+ PSC  RW++Y +
Sbjct:   203 TPDLSSGDCENCLRQSAIDYQSCCSQKRGGVVMRPSCFLRWDLYTY 248

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP;RCA

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP

GO:0016020 "membrane" evidence=ISS

GO:0009611 "response to wounding" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
 Identities = 102/238 (42%), Positives = 154/238 (64%)

Query:     2 LLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYG 61
             L+S+  +T+ + C+ +G F  NSTY  NR   LS+L+SNVT++ GF+ S  GQ P+ V+ 
Sbjct:    15 LISLDSVTAQEICF-SGFFKPNSTYDLNRRQILSTLSSNVTSHNGFFNSKFGQAPNRVFI 73

Query:    62 LALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELK 121
               +C   + PE+C+ C+      + ++CPN+ +A +W      C+VRYSN SF G L ++
Sbjct:    74 NGMCIPGTKPETCSDCIKGASDKISESCPNKTDAYTWPDC---CMVRYSNVSFSGSLVME 130

Query:   122 PTEVNHNINNIT---SSLTQFDRIWRSLMDRVLAKAS----SGNS--KLKFATEEANLTS 172
             P+E  ++  +I    ++LT FDRIW  LM R +  AS    +G+S  +  FA E A+LT+
Sbjct:   131 PSETLYHTGDIEDTGTNLTVFDRIWEELMLRTITAASLSSSNGSSFGQKYFAAEVASLTT 190

Query:   173 SETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYG 230
              +T+YA+MQCTPD+S  DCEFCL+ S+ D +SCC GK+G  V+ PSC  RW++YP+ G
Sbjct:   191 FQTMYAMMQCTPDVSSKDCEFCLKTSVGDYESCCRGKQGGAVIRPSCFVRWDLYPYAG 248

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 8.5e-76, Sum P(2) = 8.5e-76
 Identities = 86/220 (39%), Positives = 123/220 (55%)

Query:    12 QTCYD-TGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDST 70
             Q C + TGNFT N+ Y  N D  +SSL+S      GFY  ++G   + V  ++ CRGD  
Sbjct:    29 QICSNVTGNFTVNTPYAVNLDRLISSLSSLRRNVNGFYNISVGDSDEKVNSISQCRGDVK 88

Query:    71 PESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNIN 130
              E C +C+    + ++  CP QKEAI W   D  C  RYSNR+ F +LE+ P        
Sbjct:    89 LEVCINCIAMAGKRLVTLCPVQKEAIIW--YD-KCTFRYSNRTIFNRLEISPHTSITGTR 145

Query:   131 NITSSLTQFDRIWRSLMDRVLAKASS-GNSKLKFATEEANLTSSETIYALMQCTPDISQS 189
             N T     +++  R L++ +  +AS  G SK  F   E +  S +T++ L+QCTPDIS+ 
Sbjct:   146 NFTGDRDSWEKSLRGLLEGLKNRASVIGRSKKNFVVGETSGPSFQTLFGLVQCTPDISEE 205

Query:   190 DCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFY 229
             DC +CL Q +A + SCC  K GSYV+ PSC+  +  + FY
Sbjct:   206 DCSYCLSQGIAKIPSCCDMKMGSYVMSPSCMLAYAPWRFY 245

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2121606 CRK13 "cysteine-rich RLK (RECEPTOR-like protein kinase) 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 462 (167.7 bits), Expect = 3.4e-74, Sum P(2) = 3.4e-74
 Identities = 95/237 (40%), Positives = 131/237 (55%)

Query:     1 MLLSIIRLTSGQTCYDTGN-FTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAV 59
             +L S +   S QTC +    FT N TY  NR L LSSL +N  +  GFY  +IG+  D V
Sbjct:    14 LLASGVASVSAQTCIENRKYFTPNGTYDSNRRLILSSLPNNTASRDGFYYGSIGEEQDRV 73

Query:    60 YGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKL- 118
             Y L +C   STP  C++C+      ++++C NQ +A  W      C+VRYSN SF G   
Sbjct:    74 YALGMCIPKSTPSDCSNCIKGAAGWLIQDCVNQTDAYYWALDPTLCLVRYSNISFSGSAA 133

Query:   119 --ELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLK-----FATEEANLT 171
               E++P  +  N   I S+LT+F  IW  L  R +  AS+  S        +  + ANLT
Sbjct:   134 FWEIEPQYLVLNTATIASNLTEFKTIWEDLTSRTITAASAARSTPSSSDNHYRVDFANLT 193

Query:   172 SSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPF 228
               + IYALMQCTPDIS  +C  CL++ + + QSCC    G YV+ P C FRW+++ F
Sbjct:   194 KFQNIYALMQCTPDISSDECNNCLQRGVLEYQSCCGNNTGGYVMRPICFFRWQLFTF 250

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=IEP;RCA

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2123071 CRK33 "cysteine-rich RLK (RECEPTOR-like protein kinase) 33" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
 Identities = 95/235 (40%), Positives = 138/235 (58%)

Query:     1 MLLSIIRLTSGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVY 60
             +L+SII   S Q C +TG F    TY  NR   L+SLAS V  + GFY S+IG++PD V+
Sbjct:    15 VLISIIGAISSQQCNETGYFEPWKTYDTNRRQILTSLASKVVDHYGFYNSSIGKVPDEVH 74

Query:    61 GLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLEL 120
              + +C   + P  C+ CL      + +NCPNQ EA +W      C  RYSN SFF ++ L
Sbjct:    75 VMGMCIDGTEPTVCSDCLKVAADQLQENCPNQTEAYTWTPHKTLCFARYSNSSFFKRVGL 134

Query:   121 KPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSG-NSKLK----FATEEANLTSSET 175
              P  + H+  +I S+LT  + IW +L DR+++ ASS  N+ L     +A    NLT+ + 
Sbjct:   135 HPLYMEHSNVDIKSNLTYLNTIWEALTDRLMSDASSDYNASLSSRRYYAANVTNLTNFQN 194

Query:   176 IYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYG 230
             IYALM CTPD+ +  C  CL +++++  +    ++G  V  PSC FRW++YPF G
Sbjct:   195 IYALMLCTPDLEKGACHNCLEKAVSEYGNLRM-QRG-IVAWPSCCFRWDLYPFIG 247

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121711 CRK22 "cysteine-rich RLK (RECEPTOR-like protein kinase) 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 5.0e-73, Sum P(2) = 5.0e-73
 Identities = 95/238 (39%), Positives = 129/238 (54%)

Query:     1 MLLSI-IRLTSGQTCYDTGN-FTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDA 58
             +LL+  +   S QTC +    FT N TY  NR L LSSL +N  +  GFY  +IG+  D 
Sbjct:    13 ILLAFGVASVSAQTCIENRKYFTPNGTYDSNRRLILSSLPNNTASQDGFYYGSIGEEQDR 72

Query:    59 VYGLALCRGDSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKL 118
             VY L +C   STP  C +C+      ++++C NQ +A  W      C+VRYSN SF G  
Sbjct:    73 VYALGMCIPRSTPSDCFNCIKGAAGWLIQDCVNQTDAYYWALDPTLCLVRYSNISFSGSA 132

Query:   119 ---ELKPTEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLK-----FATEEANL 170
                E++P  +  N   I S LT F  IW  L  R +  AS+  S        +  + ANL
Sbjct:   133 AFWEIEPQYLVLNTATIASDLTDFKNIWEDLTSRTITAASAARSTPSSSDNHYRVDFANL 192

Query:   171 TSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPF 228
             T  + IYALMQCTPDIS  +C  CL++ + + QSCC    G YV+ P C FRW+++ F
Sbjct:   193 TKFQNIYALMQCTPDISSDECNNCLQRGVLEYQSCCGNNTGGYVMRPICFFRWQLFTF 250

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2137144 CRK37 "cysteine-rich RLK (RECEPTOR-like protein kinase) 37" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 1.7e-72, Sum P(2) = 1.7e-72
 Identities = 91/231 (39%), Positives = 133/231 (57%)

Query:    10 SGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIP--DAVYGLALCRG 67
             +G  CY  G+F  N  YG +R    SSL SNV +N GFY ++ G+    + V+ +ALCR 
Sbjct:    26 AGFICY--GDFF-NVNYGVSRTYLFSSLPSNVVSNGGFYNASFGRDSKNNRVHVVALCRR 82

Query:    68 DSTPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFP---CVVRYSNRSFFGKLELKPTE 124
                 ++C +CL   + D    CP QKE+ SW   +F    C +RY+N S  GKLEL P  
Sbjct:    83 GYEKQACKTCLEHVIEDTKSKCPRQKESFSWVTDEFDDVSCSLRYTNHSTLGKLELLPNT 142

Query:   125 VNHNINNITS---SLTQFDRIWRSLMDRVLAKASSG-NSK-LKF-ATEEANLTSSETIYA 178
             +N N N+I S   ++  F + W ++++R L  AS+  NS  LK+ +      T    +YA
Sbjct:   143 INPNPNSIDSKFNNMAMFSQEWIAMVNRTLEAASTAENSSVLKYYSATRTEFTQISDVYA 202

Query:   179 LMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFY 229
             LMQC PD+S  +C+ CLR+ + D Q   +G++G  V  PSC FRW++YP+Y
Sbjct:   203 LMQCVPDLSPGNCKRCLRECVNDFQKQFWGRQGGGVSRPSCYFRWDLYPYY 253

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2123056 CRK32 "cysteine-rich RLK (RECEPTOR-like protein kinase) 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 2.4e-72, Sum P(2) = 2.4e-72
 Identities = 81/223 (36%), Positives = 121/223 (54%)

Query:    10 SGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTANKGFYTSTIGQIPDAVYGLALCRGDS 69
             S Q C D+  F  N TY  NR L LS+LASNV++  G+Y  ++G+ PD +Y L LC   +
Sbjct:    22 SAQKCVDSMFFRPNGTYDTNRHLILSNLASNVSSRDGYYNGSVGEGPDRIYALGLCIPGT 81

Query:    70 TPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSFFGKLELKPTEVNHNI 129
              P+ C  C+      +++NCPNQ ++  W      C VRYSN SFF K++L+PT V  ++
Sbjct:    82 DPKVCDDCMQIASTGILQNCPNQTDSYDWRSQKTLCFVRYSNSSFFNKMDLEPTMVIGDL 141

Query:   130 NN--ITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDIS 187
             N+      L  + R W   M+ ++ +      + ++  + +    S  IYALMQC   IS
Sbjct:   142 NSGLFQGDLAAYTRTWEEFMNSMITRVG----RTRYLADISPRIGSARIYALMQCIRGIS 197

Query:   188 QSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYG 230
               +CE C+R ++   QSCC G  G  +  P C FRW+   + G
Sbjct:   198 SMECETCIRDNVRMYQSCCNGFIGGTIRKPVCFFRWDGSEYLG 240

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2123126 CRK31 "cysteine-rich RLK (RECEPTOR-like protein kinase) 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 3.0e-72, Sum P(2) = 3.0e-72
 Identities = 88/228 (38%), Positives = 123/228 (53%)

Query:    10 SGQTCYDTGNFTTNSTYGKNRDLFLSSLASNVTA-NKGFYTSTIGQIPDAVYGLALCRGD 68
             S Q C ++  F  N  Y  NR L LS+LASNV++ N  FY  ++G+    +Y L LC   
Sbjct:    22 SAQKCGESVFFRPNGNYDTNRRLVLSTLASNVSSQNNRFYNVSVGEGAGRIYALGLCIPG 81

Query:    69 STPESCASCLNFTVRDMMKNCPNQKEAISWGGMDFP---CVVRYSNRSFFGKLELKPTEV 125
             S P  C+ C+    + +++ CPNQ ++  W G +     C VRYSN SFF K+ L+PT  
Sbjct:    82 SDPRVCSDCIQLASQGLLQTCPNQTDSFYWTGDNADKTLCFVRYSNNSFFNKMALEPTHA 141

Query:   126 NHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSK-LKFATEEANLT--SSETIYALMQC 182
              +N      +LT + R W + M+ +  +   G ++ L   +   N    S + IYALMQC
Sbjct:   142 VYNTMRFQGNLTAYTRTWDAFMNFMFTRV--GQTRYLADISPRINQEPLSPDLIYALMQC 199

Query:   183 TPDISQSDCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPFYG 230
              P IS  DCE CL + + D QSCC G  G  V  P C FRW+ Y +YG
Sbjct:   200 IPGISSEDCETCLGKCVDDYQSCCNGFIGGVVNKPVCYFRWDGYKYYG 247

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	399
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	3e-29
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	2e-26
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-12
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-12
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-10
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-09
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-08
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-07
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	8e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	7e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-05
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	4e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-04
COG3889	872	COG3889, COG3889, Predicted solute binding protein	5e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	6e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	7e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	8e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	9e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	9e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.001
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	0.001
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.001
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.001
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.001
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.001
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.002
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.002
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.002
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.002
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.002
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.003
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.003
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.003
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.003
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	0.003
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	0.003
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.004
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.004
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.004

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score =  109 bits (274), Expect = 3e-29
 Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 6/102 (5%)

Query: 16  DTGNFTT-NSTYGKNRDLFLSSLASNVTA--NKGFYTSTIGQIPDAVYGLALCRGDSTPE 72
            +GN+TT NST+  N +  LSSL+SN  +   KGF   T G  PD VYGLA CRGD +  
Sbjct: 8   TSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSAS 67

Query: 73  SCASCLNFTVRDMMKNCPNQKEAISWGGMDFPCVVRYSNRSF 114
            C SCL   V ++ + CPN+K    W      C +RY +  F
Sbjct: 68  DCRSCLATAVSELRRCCPNKKGGRIWYD---SCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score =  101 bits (254), Expect = 2e-26
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 130 NNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQS 189
            N T++ + F+    +L+  + + A+S + K  FA    +  + +T+Y L QC  D+S S
Sbjct: 10  GNYTTANSTFESNLNALLSSLSSNAASSSGKG-FAAG-TSGAAPDTVYGLAQCRGDLSAS 67

Query: 190 DCEFCLRQSMADLQSCCYGKKGSYVLGPSCIFRWEMYPF 228
           DC  CL  ++++L+ CC  KKG  +   SC  R+E YPF
Sbjct: 68  DCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 68.7 bits (169), Expect = 4e-13
 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 327 DNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNL 380
             KLG+G FG VYKG+L         E+AVK L +++ + ++ EF  E  ++ +L H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG   E     ++ E+
Sbjct: 64  VKLLGVCTEEEPLYIVMEY 82

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 67.6 bits (166), Expect = 7e-13
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 327 DNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNL 380
             KLG+G FG VYKG L         E+AVK L ++ S Q   EF  E  ++ +L H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG   E    +++ E+
Sbjct: 64  VKLLGVCTEEEPLMIVMEY 82

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 67.1 bits (165), Expect = 1e-12
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 329 KLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLVR 382
           KLG+G FG VYKG L         ++AVK L + + + E  EF  E  ++ +L H N+VR
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 383 LLGFSFEGTERLLIYEF 399
           LLG   +G    ++ E+
Sbjct: 66  LLGVCTQGEPLYIVTEY 82

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRLLGFS 387
           LG+GGFG VY  R    G+++A+K + K      LE    E+ ++ +L H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 388 FEGTERLLIYEF 399
            +     L+ E+
Sbjct: 61  EDENHLYLVMEY 72

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 324 FSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLV 381
           +    KLG+G FG VY  R    G+ +A+K + K  ++ + E    E+ ++ +L+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 382 RLLGFSFEGTERLLIYEF 399
           RL     +  +  L+ E+
Sbjct: 61  RLYDVFEDEDKLYLVMEY 78

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.6 bits (153), Expect = 4e-11
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 328 NKLGQGGFGAVYKGRLSHGQ----EIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLVR 382
            KLG+G FG VYKG+L        E+AVK L +++ + E  +F  E  ++ +L H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 383 LLGFSFEGTERLLIYEF 399
           LLG   E     L+ E+
Sbjct: 61  LLGVCTEEEPLYLVLEY 77

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 329 KLGQGGFGAVYKGRLSH-GQEIAVKRLSK--NSVQGELEFKNEVLLVARLQHRNLVRLLG 385
           KLG G FG VYK +    G+ +AVK L K     + +   + E+ ++ RL H N+VRL+ 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 386 FSFEGTERLLIYEF 399
              +     L+ E+
Sbjct: 66  AFEDKDHLYLVMEY 79

Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRLSHG------QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNL 380
             LG G FG VY+G            ++AVK L ++ S Q E +F  E L++++  H+N+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 381 VRLLGFSFEGTERLLIYEF 399
           VRL+G SFE   R ++ E 
Sbjct: 72  VRLIGVSFERLPRFILLEL 90

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 323 NFSTDNKLGQGGFGAVYKG-RLSHGQEIAVKRLSKNSV-QGEL-EFKNEVLLVARLQHRN 379
           N+   + +G+G FG VYKG  L  G  +A+K++S   + +  L     E+ L+  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V+ +G         +I E+
Sbjct: 61  IVKYIGSIETSDSLYIILEY 80

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 330 LGQGGFGAVYKGRL------SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVR 382
           LG+G FG VYKG L           +A+K L +N   + + EF+ E  L++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 383 LLGFSFEGTERLLIYEF 399
           LLG   +     +++E+
Sbjct: 73  LLGVCTKEQPTCMLFEY 89

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 330 LGQGGFGAVYKGRLSHGQE------IAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVR 382
           LG+G FG V+ G   H +       +AVK L + +      +F+ E  L+   QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 383 LLGFSFEGTERLLIYEF 399
             G   EG   ++++E+
Sbjct: 73  FYGVCTEGDPPIMVFEY 89

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)

Query: 328 NKLGQGGFGAVYKG--RLSHGQEI--AVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVR 382
            +LG G FG+V KG   +  G+E+  AVK L +     G+ EF  E  ++A+L H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 383 LLG 385
           L+G
Sbjct: 61  LIG 63

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 330 LGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE 389
           +G+G FG V  G    GQ++AVK L K+       F  E  ++  L+H NLV+LLG   +
Sbjct: 14  IGKGEFGDVMLGDYR-GQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 390 GTERLLIYEF 399
           G    ++ E+
Sbjct: 72  GNPLYIVTEY 81

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 328 NKLGQGGFGAVYKGRLSH-GQEIAVK--RLSKNSVQGELEFKNEVLLVARLQHRNLVRLL 384
             LG+G FG+VY       G+ +AVK   LS +S +     + E+ +++ LQH N+VR  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 385 GFSFEGTER-LLIY-EF 399
           G   +  +  L I+ E+
Sbjct: 66  GSERDEEKNTLNIFLEY 82

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR---LSHGQE---IAVKRLSKN-SVQGELEFKNEVLLVAR 374
           NN      +GQG FG V++ R   L   +    +AVK L +  S   + +F+ E  L+A 
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
             H N+V+LLG    G    L++E+
Sbjct: 65  FDHPNIVKLLGVCAVGKPMCLLFEY 89

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 23/75 (30%), Positives = 41/75 (54%)

Query: 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           F+ + KLG G FG V++G   +   +A+K L  + +  + +F+ EV  + RL+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 384 LGFSFEGTERLLIYE 398
                 G    +I E
Sbjct: 68  FAVCSVGEPVYIITE 82

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 9/65 (13%)

Query: 329 KLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRNL 380
           +LG+  FG VYKG L         Q +A+K L K+  +G L  EFK+E ++ +RLQH N+
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTL-KDKAEGPLREEFKHEAMMRSRLQHPNI 70

Query: 381 VRLLG 385
           V LLG
Sbjct: 71  VCLLG 75

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 50.0 bits (119), Expect = 8e-07
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 329 KLGQGGFGAVYKGRL-----SHGQEIAVKRLSK-NSVQGELEFKNEVLLVARLQHRNLVR 382
           +LG+  FG +YKG L      H Q +A+K L   N+ Q   EF+ E  L+A L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 383 LLGFSFEGTERLLIYEF 399
           LLG   +     +++E+
Sbjct: 72  LLGVVTQEQPVCMLFEY 88

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF 388
           ++G G FG V+ G     +++A+K + + ++  E +F  E  ++ +L H  LV+L G   
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEE-DFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 389 EGTERLLIYEF 399
           E +   L++EF
Sbjct: 70  ERSPICLVFEF 80

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 324 FSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
           F    K+G+GGFG VYK R    G+E+A+K +   S + + +  NE+ ++ + +H N+V+
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 383 LLGFSFEGTERLLIYEF 399
             G   +  E  ++ EF
Sbjct: 62  YYGSYLKKDELWIVMEF 78

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 330 LGQGGFGAVYKGRLSHG----QEIAVKRLS-KNSVQGELE-FKNEVLLVARLQHRNLVRL 383
           LG+G FG+V +G+LS       ++AVK +        E+E F +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 384 LGFSFEGTER 393
           +G  FE +  
Sbjct: 67  IGVCFEASSL 76

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 328 NKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
            +LG+G FG V   R      + G+++AVK L+ +  +    +F+ E+ ++  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 382 RLLGFSFEGTER--LLIYEF 399
           +  G   +   R   LI E+
Sbjct: 70  KYKGVCEKPGGRSLRLIMEY 89

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 329 KLGQGGFGAVYKGRLSH---GQE---IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
           +LG+G FG V+     +    Q+   +AVK L + S     +F+ E  L+  LQH+++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 383 LLGFSFEGTERLLIYEF 399
             G   EG   L+++E+
Sbjct: 72  FYGVCTEGRPLLMVFEY 88

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQH 377
           D    +    K+G+G  G VYK      G+E+A+K++     Q +    NE+L++   +H
Sbjct: 16  DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK-QNKELIINEILIMKDCKH 74

Query: 378 RNLVRLLG 385
            N+V    
Sbjct: 75  PNIVDYYD 82

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 47.2 bits (112), Expect = 6e-06
 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
           +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV+LLG
Sbjct: 12  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLG 69

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 46.8 bits (111), Expect = 7e-06
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 330 LGQGGFGAVYKGRL-------SHGQEIAVKRLSKNSVQGE-LEFKNEVLLVARLQHRNLV 381
           LG G FG VY+G         S    +AVK L K +   E  EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 382 RLLGFSFEGTERLLIYE 398
           +LLG       + +I E
Sbjct: 63  KLLGVCLLNEPQYIIME 79

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
            +G+G FGAV +G  + GQ++AVK + K  V  +  F  E  ++ +L H+NLVRLLG
Sbjct: 13  IIGEGEFGAVLQGEYT-GQKVAVKNI-KCDVTAQ-AFLEETAVMTKLHHKNLVRLLG 66

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRL---SKNSVQGELEFKN---EVLLVARLQHRNLV 381
             LG+G +G VY G  + GQ IAVK++   + N +  E E++    EV L+  L+H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 382 RLLGFSFEGTERLLIYEF 399
           + LG   +     +  EF
Sbjct: 66  QYLGTCLDDNTISIFMEF 83

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQE------IAVKRLSKNSVQG-ELEFKNEVLLVARL 375
           N      LG+G FG V+  +    +E      + VK L K   +  + EF+ E+ +  +L
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VRLLG   E     +I E+
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEY 89

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 330 LGQGGFGAVYKGR-LSHGQ----EIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRL 383
           LG G FG VYKG  +  G+     +A+K L + +  +   E  +E  ++A + H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 384 LGFSFEGTERL-LIYEF 399
           LG     + ++ LI + 
Sbjct: 75  LGICL--SSQVQLITQL 89

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---------EVLLV 372
           +++   K+G+G +G VYKGR    GQ +A+K++        LE +          E+ L+
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKI-------RLESEEEGVPSTAIREISLL 53

Query: 373 ARLQHRNLVRLLGFSFEGTERLLIYEF 399
             LQH N+V L     + +   LI+EF
Sbjct: 54  KELQHPNIVCLQDVLMQESRLYLIFEF 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 6/72 (8%)

Query: 330 LGQGGFGAVYKG-RLSHGQEI----AVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRL 383
           LG G FG VYKG  +  G+ +    A+K L++ +  +  +EF +E L++A + H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 384 LGFSFEGTERLL 395
           LG     T +L+
Sbjct: 75  LGVCLSPTIQLV 86

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF 388
           LG+G +G VY  R LS    IA+K + +   +       E+ L + L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 389 EG 390
           E 
Sbjct: 76  EN 77

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKG---RLSHGQ---EIAVKRLSKNSVQGE-LEFKNEVLLVAR 374
              +   +LGQG FG VY+G    +  G+    +A+K +++N+   E +EF NE  ++  
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE 65

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
               ++VRLLG    G   L++ E 
Sbjct: 66  FNCHHVVRLLGVVSTGQPTLVVMEL 90

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRLLGFS 387
           K+G+G FG VYKG L    E+AVK             F  E  ++ +  H N+V+L+G  
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 388 FEGTERLLIYEF 399
            +     ++ E 
Sbjct: 62  VQKQPIYIVMEL 73

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 329 KLGQGGFGAVYKGRLSHG---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLL 384
           ++G G FG V  G ++ G    ++ VK L  + SVQ +++F  E      LQH NL++ L
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 385 GFSFEGTERLLIYEF 399
           G   E T  LL+ EF
Sbjct: 62  GQCTEVTPYLLVMEF 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG--ELEFKNEVLLVARLQHRNLVRLLG 385
           ++G+G  G V+K +    G+ +A+K+++   ++G    +   E+  +   QH  +V+LL 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 386 FSFEGTERLLIYEF 399
               G+  +L+ E+
Sbjct: 67  VFPHGSGFVLVMEY 80

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 44.1 bits (104), Expect = 6e-05
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           KLG G FG V+ G  +   ++A+K L + S+  E  F  E  L+ +LQH  LVRL
Sbjct: 13  KLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPE-AFLAEANLMKQLQHPRLVRL 66

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 329 KLGQGGFGAVYKGR----LSHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLVRL 383
           KLG G FG V +G           +AVK L  + +   + +F  E  ++  L H NL+RL
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 384 LG 385
            G
Sbjct: 62  YG 63

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 44.0 bits (102), Expect = 9e-05
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELE---FKNEVLLVARLQH-R 378
           ++    KLG+G FG VY  R    + +A+K L+K       E   F  E+ ++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 379 NLVRLLGFSFEGTERLLIYEF 399
           N+V+L  F  +     L+ E+
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEY 79

Length = 384

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 43.5 bits (103), Expect = 9e-05
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 320 ATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKR-LSKNSVQG-ELEFKNEVLLVARLQ 376
              ++    KLG+G FG VYK R +  G+ +A+K+ L  N   G  +    E+ ++ +L+
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 377 HRNLVRLLGFSFE 389
           H N+V L+  + E
Sbjct: 66  HPNVVPLIDMAVE 78

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR---LSHGQE---IAVKRLSKNSVQGELEFKNEVLLVARL 375
           +N     +LG+G FG V+      L   Q+   +AVK L   S     +F  E  L+  L
Sbjct: 5   HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 64

Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
           QH ++V+  G   EG   ++++E+
Sbjct: 65  QHEHIVKFYGVCVEGDPLIMVFEY 88

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 14/80 (17%)

Query: 330 LGQGGFGAVYKG-RLSHGQEIAVK--------RLSKNSVQGELEFKNEVLLVARLQHRNL 380
           LG G FG+VY+G  L  G   AVK        +  + +V+ +LE   E+ L+++LQH N+
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVK-QLE--QEIALLSKLQHPNI 64

Query: 381 VRLLGFSFEGTERLLIY-EF 399
           V+ LG   E  + L I+ E 
Sbjct: 65  VQYLGTEREE-DNLYIFLEL 83

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 323 NFSTDNKLGQGGFGAVYK-GRLSHGQEIAVKR--LSKNSVQGELEFKNEVLLVARLQHRN 379
           +F    KLG+G +G+VYK  RLS  Q  A+K   L   S +   +  NE+ ++A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 380 LVR 382
           ++ 
Sbjct: 61  IIS 63

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIA---VKRL-SKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           +++G G FG V  G    G   A   VK L +  +   +L F  EV     L H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 384 LGFSFEGTERLLIYEF 399
           LG   E    LL+ EF
Sbjct: 61  LGQCIESIPYLLVLEF 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 324 FSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
           F    KLG+G +G+VYK      GQ +A+K +    V+ +L E   E+ ++ +     +V
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVV---PVEEDLQEIIKEISILKQCDSPYIV 61

Query: 382 RLLGFSFEGTERLLIYEF 399
           +  G  F+ T+  ++ E+
Sbjct: 62  KYYGSYFKNTDLWIVMEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           KLG G FG V++G  ++   +AVK L   ++  + +F  E  ++ +L+H  L++L
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPK-DFLAEAQIMKKLRHPKLIQL 66

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
            +   + KLG G FG V+ G  +   ++AVK L   ++  E  F  E  ++ +L+H  LV
Sbjct: 6   ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPE-AFLQEAQIMKKLRHDKLV 64

Query: 382 RL 383
           +L
Sbjct: 65  QL 66

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR 374
           +I D    ++   K+GQG  G V+    ++ GQE+A+K+++      +    NE+L++  
Sbjct: 13  SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKE 72

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
           L++ N+V  L     G E  ++ E+
Sbjct: 73  LKNPNIVNFLDSFLVGDELFVVMEY 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 329 KLGQGGFGAVYKGRLSHG-------QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNL 380
           +LGQG FG VY+G ++ G         +A+K +++  S++  +EF NE  ++      ++
Sbjct: 13  ELGQGSFGMVYEG-IAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 71

Query: 381 VRLLGFSFEGTERLLIYEF 399
           VRLLG   +G   L+I E 
Sbjct: 72  VRLLGVVSQGQPTLVIMEL 90

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)

Query: 330 LGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQG-ELEFKNEVLLVARLQHRNLVRLLGFSF 388
           LG+G FG V+KG L     +AVK   ++  Q  +++F +E  ++ +  H N+V+L+G   
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC- 61

Query: 389 EGTERLLIY 397
             T+R  IY
Sbjct: 62  --TQRQPIY 68

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 268 IIVVSTSIFIIALVALVTCVFLRRRKQKQDLTKADEINTVESLQFD--FS---TIRDATN 322
            I  +   F++  +     VF+R R   +     +E  T E   FD   S   TI D  +
Sbjct: 631 YITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILS 690

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSK-NSVQGELEFKNEVLLVARLQHRNL 380
           +   +N + +G  GA YKG+ + +G +  VK ++  NS+       +E+  + +LQH N+
Sbjct: 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP-----SSEIADMGKLQHPNI 745

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+L+G         LI+E+
Sbjct: 746 VKLIGLCRSEKGAYLIHEY 764

Length = 968

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEF-KNEVLLVARLQHRNLVRLLGF 386
            ++G G +G VYK R     E+   ++ K     + E  + E+ ++   +H N+V   G 
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFG- 67

Query: 387 SFEGTERLLI 396
           S+   ++L I
Sbjct: 68  SYLRRDKLWI 77

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEI-AVKRLS-KNSVQGELEF-KNEVLLVARLQHRNLVRLL 384
            ++G+G FG VY  R     ++  +K +   N  + E E   NEV ++ +L H N+++  
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 385 GFSFEGTERLLI 396
             SFE   +L I
Sbjct: 66  E-SFEEKGKLCI 76

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEI-AVKRLSKNSVQGELEFK-NEVLLVARLQHRNL 380
           NF    KLG+G +  VYKGR     EI A+K +  ++ +G       E+ L+  L+H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 381 VRLLGFSFEGTERLLIYEF 399
           VRL        + +L++E+
Sbjct: 61  VRLHDVIHTENKLMLVFEY 79

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 328 NKLGQGGFGAVYKG-RLSHGQEIAVK--RLSKNSVQGELEFKNEVLLVARLQHRNLVRLL 384
           NK+G G FG VY    L  G+ +AVK  R+  N  +   E  +E+ ++  L+H NLV+  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 385 GFSFEGTERLLIYE 398
           G      E++ I+ 
Sbjct: 66  GVEVH-REKVYIFM 78

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 329 KLGQGGFGAVYKGR---LSHGQE---IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
           +LG+G FG V+      LS  ++   +AVK L   ++    +F+ E  L+  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 383 LLGFSFEGTERLLIYEF 399
             G   +G   ++++E+
Sbjct: 72  FYGVCGDGDPLIMVFEY 88

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEI-AVKRLSKNSVQGELEFK---NE--VLLVARL 375
            +F    ++GQGG+G V+  +     EI A+KR+ K+ +    E +    E  +L   + 
Sbjct: 1   KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK- 59

Query: 376 QHRNLVRLLGFSFEGTERL-LIYEF 399
               LV+LL ++F+  E L L  E+
Sbjct: 60  -SEWLVKLL-YAFQDDEYLYLAMEY 82

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General function prediction only]

 Score = 42.2 bits (99), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 232 TADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRR 291
           T  S SP+  + P+ T+ +TTT      S S  T    +    + I+ L AL   + LRR
Sbjct: 816 TTSSPSPTQTTSPTQTSTSTTT----TTSPSQTTTGGGICGPIVIIVGLAALA--LLLRR 869

Query: 292 RK 293
           R+
Sbjct: 870 RR 871

Length = 872

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 329 KLGQGGFGAVYKGRLSHGQEI-AVKRLS-KNSVQGELEFK-NEVLLVARLQHRNLVRLLG 385
           K+G+G +G V+K +     EI A+KR+   +  +G       E+ L+  L+H+N+VRL  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 386 FSFEGTERLLIYEF 399
                 +  L++E+
Sbjct: 67  VLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 41.1 bits (96), Expect = 6e-04
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 323 NFSTDNKLGQGGFGAVY--KGRLSHGQEIAVKR--LSKNSVQGELEFKNEVLLVARLQHR 378
            +    K+G+G FG +Y  K + S  +   +K   L+K  V+ +   K EV+L+A+++H 
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAK-SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP 59

Query: 379 NLVRLLGFSFEGTERLLI 396
           N+V     SF+   RL I
Sbjct: 60  NIVTFFA-SFQENGRLFI 76

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 40.8 bits (95), Expect = 7e-04
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 330 LGQGGFGAVYKGRLSHGQEI---AVKRLS-KNSVQGELE-FKNEVLLVARLQHRNLVRLL 384
           LG+G FG+V +G+L+    I   AVK +      + E+E F +E + +    H N++RL+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 385 GFSFEGTER 393
           G   +  E 
Sbjct: 67  GVCLQTVES 75

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEI-AVKRLSKNSVQGELEFKN--EVLLVARLQHRN 379
            F   N++G+G +G VY+ R +   EI A+K++  ++ +  +   +  E+ L+  L+H N
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67

Query: 380 LVRLL 384
           +V L 
Sbjct: 68  IVELK 72

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQ------EIAVKRLSKNSVQGEL-EFKNEVLLVARL 375
           N      LG+G FG V K      +       +AVK L +N+   EL +  +E  L+ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H ++++L G   +    LLI E+
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEY 84

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 9e-04
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE----IAVKRLSKNSVQGE-LEFKNEVLLVARLQ 376
           +  + +  +G G FG V +GRL    +    +A+K L   S   + L+F  E  ++ +  
Sbjct: 4   SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD 63

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H N++RL G   +    ++I E+
Sbjct: 64  HPNIIRLEGVVTKSRPVMIITEY 86

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVK--RLSKNSVQGELEFKNEVLLVARLQHRN 379
           NF    K+G+G +G VYK R    G+ +A+K  RL   +         E+ L+  L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V+LL       +  L++EF
Sbjct: 61  IVKLLDVIHTENKLYLVFEF 80

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 17/81 (20%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---------EVLLVARLQHR 378
           K+G+G +G VYK R    G+ +A+K++        LE ++         E+ L+  L H 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKI-------RLETEDEGVPSTAIREISLLKELNHP 58

Query: 379 NLVRLLGFSFEGTERLLIYEF 399
           N+VRLL       +  L++EF
Sbjct: 59  NIVRLLDVVHSENKLYLVFEF 79

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSK---NSVQGELEFKNEVLLVARL-Q 376
           ++F     +G+G F  V   +     +E A+K L K      +     K E  ++ RL  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 377 HRNLVRLLGFSFEGTERL-LIYEF 399
           H  +++L  ++F+  E L  + E+
Sbjct: 61  HPGIIKLY-YTFQDEENLYFVLEY 83

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 330 LGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLL 384
           LG+G FG+V   R      + G+ +AVK+L  ++ +   +F+ E+ ++  LQH N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 385 GFSFEGTER--LLIYEF 399
           G  +    R   L+ E+
Sbjct: 72  GVCYSAGRRNLRLVMEY 88

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKG-RLSHGQEIAVKRLS-KNSVQGELEFKNEVLLVA 373
           ++ D    ++   K+GQG  G VY    ++ GQE+A+K+++ +   + EL   NE+L++ 
Sbjct: 13  SVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKEL-IINEILVMR 71

Query: 374 RLQHRNLVRLLGFSFEGTERLLIYEF 399
             +H N+V  L     G E  ++ E+
Sbjct: 72  ENKHPNIVNYLDSYLVGDELWVVMEY 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---EVLLVARLQHRNLVRLL 384
           K+G+G +G VYK R    G+ +A+K++     + E   K    E+ L+  L H N+++LL
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKL-RFESEGIPKTALREIKLLKELNHPNIIKLL 64

Query: 385 GFSFEGTERLLIYEF 399
                  +  L++EF
Sbjct: 65  DVFRHKGDLYLVFEF 79

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQE-IAVKRLSKNSVQGELE-FKNEVLLVARLQ 376
           D    F+   ++G+G FG VYKG  +  +E +A+K +     + E+E  + E+ ++++  
Sbjct: 1   DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
              + R  G   +GT+  +I E+
Sbjct: 61  SPYITRYYGSYLKGTKLWIIMEY 83

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 7/61 (11%)

Query: 328 NKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEF----KNEVLLVARLQHRNLVR 382
            ++G+G +G VYK R    G+ +A+K++       +  F      E+ L+ +L+H N+VR
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKI--RMENEKEGFPITAIREIKLLQKLRHPNIVR 62

Query: 383 L 383
           L
Sbjct: 63  L 63

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKN-----EVLLVARLQ 376
            +    KLG+G +  VYK R    G+ +A+K++     +   +  N     E+ L+  L+
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 377 HRNLVRLL 384
           H N++ LL
Sbjct: 61  HPNIIGLL 68

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 7/78 (8%)

Query: 329 KLGQGGFGAVYKG---RLSHGQ---EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLV 381
           +LGQG FG VY+G    +  G+    +AVK ++++ S++  +EF NE  ++      ++V
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 382 RLLGFSFEGTERLLIYEF 399
           RLLG   +G   L++ E 
Sbjct: 73  RLLGVVSKGQPTLVVMEL 90

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 330 LGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE 389
           LG G FG V+ G+     ++A+K + +     E +F  E  ++ +L H NLV+L G   +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 390 GTERLLIYEF 399
                ++ E+
Sbjct: 71  QRPIFIVTEY 80

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRL 383
           KLG G FG V+ G  ++  ++AVK L     SVQ  LE  N   L+  LQH  LVRL
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEAN---LMKTLQHDKLVRL 66

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 329 KLGQGGFGAVYKGRLSHGQE-IAVK--RLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
           K+G+G +G VYK R     E IA+K  RL +           E+ L+  +QH N+VRL  
Sbjct: 9   KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68

Query: 386 FSFEGTERLLIYEF 399
                    L++E+
Sbjct: 69  VVHSEKRLYLVFEY 82

Length = 294

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 18/75 (24%)

Query: 329 KLGQGGFGAVY---------------KGRLSHGQE--IAVKRLSKNSVQGEL-EFKNEVL 370
           KLG+G FG V+                   +      +AVK L  ++      +F  EV 
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 371 LVARLQHRNLVRLLG 385
           +++RL   N+ RLLG
Sbjct: 72  ILSRLSDPNIARLLG 86

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)

Query: 330 LGQGGFGAVYKGRL--SHGQEI--AVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRLL 384
           +G+G FG VY G L  S GQ+I  AVK L++ +   E+E F  E +++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 385 GFS 387
           G  
Sbjct: 63  GIC 65

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 6/63 (9%)

Query: 328 NKLGQGGFGAVYKGR-LSHGQEIAVKRLS-KNSVQG-ELEFKNEVLLVARLQ---HRNLV 381
            ++G+G +G VYK R L+ G+ +A+K++    S +G  L    E+ L+ +L+   H N+V
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 382 RLL 384
           RLL
Sbjct: 65  RLL 67

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           KLG G FG V+ G  +   ++AVK L   ++  E  F  E  ++ +L+H  LV+L
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPE-SFLEEAQIMKKLRHDKLVQL 66

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRLLG-F 386
           +LG G FG VYK +      +A  ++ +   + ELE +  E+ ++A   H  +V+LLG F
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 387 SFEGTERLLIYEF 399
            ++G   ++I EF
Sbjct: 79  YWDGKLWIMI-EF 90

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLL 371
           D S +RD    F     +G G +G VYKGR +  GQ  A+K +     + E E K E+ +
Sbjct: 7   DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEE-EIKLEINM 65

Query: 372 VARL-QHRNLVRLLG 385
           + +   HRN+    G
Sbjct: 66  LKKYSHHRNIATYYG 80

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           KLGQG FG V+ G  +    +A+K L   ++  E  F  E  ++ +L+H  LV+L
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL 66

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG-ELEFKNEVLLVARLQ 376
           D  +      K+G+G  G V      S G+++AVK++     Q  EL F NEV+++   Q
Sbjct: 16  DPRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLF-NEVVIMRDYQ 74

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H N+V +      G E  ++ EF
Sbjct: 75  HPNIVEMYSSYLVGDELWVVMEF 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKG-RLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR 374
           ++ D    ++   K+GQG  G VY    ++ GQE+A+K+++      +    NE+L++  
Sbjct: 13  SVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE 72

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
            ++ N+V  L     G E  ++ E+
Sbjct: 73  NKNPNIVNYLDSYLVGDELWVVMEY 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 318 RDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARL- 375
            D T  F     +G+G +G VYK R    GQ +A+K +     + E E K E  ++ +  
Sbjct: 2   PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEE-EIKEEYNILRKYS 60

Query: 376 QHRNLVRLLG 385
            H N+    G
Sbjct: 61  NHPNIATFYG 70

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	399
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.92
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.84
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.65
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.53
KOG3653	534	consensus Transforming growth factor beta/activin	99.46
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.41
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.41
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.39
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.25
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.23
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.21
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.18
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.17
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.16
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.14
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.12
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.11
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.1
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.08
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.06
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.05
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.05
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.03
KOG0575	592	consensus Polo-like serine/threonine protein kinas	98.99
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.93
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.9
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.89
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.88
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.88
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	98.85
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	98.84
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.83
KOG0586	596	consensus Serine/threonine protein kinase [General	98.83
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.83
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.83
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.82
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.82
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.81
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.8
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.8
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.8
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.8
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.79
KOG0605	550	consensus NDR and related serine/threonine kinases	98.79
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	98.79
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.79
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.79
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.79
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.79
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.78
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.77
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.77
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.77
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.77
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.77
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.77
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.76
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.76
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.76
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.76
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.76
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.75
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.75
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.74
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.74
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.74
PHA02988	283	hypothetical protein; Provisional	98.74
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.73
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.73
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.73
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.73
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.72
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.71
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.71
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.71
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.71
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.71
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.7
KOG4721	904	consensus Serine/threonine protein kinase, contain	98.7
KOG0581	364	consensus Mitogen-activated protein kinase kinase	98.7
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.7
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.7
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.7
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.69
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.69
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.69
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.69
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.69
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.69
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.69
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.68
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.68
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.68
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.68
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.68
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.68
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.68
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.67
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.67
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.67
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.67
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.67
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.67
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.66
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.66
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.66
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.66
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.65
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.65
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.65
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.65
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.65
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.64
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.64
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.64
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.64
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.64
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.64
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.63
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.63
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.63
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.63
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.63
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.63
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.63
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.63
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.63
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.63
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.63
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.62
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.61
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.61
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.61
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.61
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.61
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.61
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.61
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.61
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.61
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.61
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.6
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.6
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.6
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.6
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.6
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.6
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.6
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.6
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.6
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.59
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.59
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.59
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.59
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.59
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.59
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.59
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.59
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.59
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.59
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.59
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.58
PLN00009	294	cyclin-dependent kinase A; Provisional	98.58
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.58
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.58
KOG0578	550	consensus p21-activated serine/threonine protein k	98.58
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.58
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.58
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.58
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.58
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.57
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.57
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.57
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.57
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.57
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.57
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.57
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.57
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.57
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.57
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.56
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.56
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.56
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.56
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.56
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.56
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.56
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.56
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.56
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.56
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.56
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.55
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.55
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.55
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.55
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.55
PHA03212	391	serine/threonine kinase US3; Provisional	98.55
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.55
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.55
PTZ00267	478	NIMA-related protein kinase; Provisional	98.55
KOG0198	313	consensus MEKK and related serine/threonine protei	98.54
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.54
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.54
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.54
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.54
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.53
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.53
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.53
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.53
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.53
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.53
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.52
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.52
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.52
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.52
PRK09188	365	serine/threonine protein kinase; Provisional	98.52
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.51
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.51
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.51
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.51
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.51
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.51
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.51
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.51
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.51
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.51
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.51
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.51
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.51
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.51
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.51
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.51
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.5
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.5
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.5
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.5
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.5
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.5
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.5
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.5
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.49
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.49
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.49
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.49
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.49
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.49
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.49
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.49
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.48
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.48
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.48
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.48
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.48
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.48
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.48
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.48
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.48
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.48
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.48
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.47
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.47
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.47
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.47
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.46
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.46
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.46
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.46
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.45
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.45
PHA03211	461	serine/threonine kinase US3; Provisional	98.45
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.45
PTZ00036	440	glycogen synthase kinase; Provisional	98.45
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.45
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.44
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.44
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.44
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.44
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.44
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.44
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.43
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.43
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.43
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.43
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.43
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.43
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.43
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.43
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.42
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.42
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.42
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.42
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.42
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.42
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.42
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.42
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.42
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.41
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.41
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.41
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.41
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.41
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.4
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.4
PHA03209	357	serine/threonine kinase US3; Provisional	98.38
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.38
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.38
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.37
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.37
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.37
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.37
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.36
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.36
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.36
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.36
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.36
PHA03207	392	serine/threonine kinase US3; Provisional	98.36
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.35
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.35
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.35
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.34
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.34
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.34
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.34
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.33
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.33
PTZ00283	496	serine/threonine protein kinase; Provisional	98.32
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.32
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.32
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.31
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.31
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.31
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.31
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.31
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.3
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.29
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.29
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.29
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.28
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.28
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.28
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.27
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.27
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.26
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.26
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.26
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.25
KOG1152	772	consensus Signal transduction serine/threonine kin	98.24
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.23
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.23
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.22
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.21
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.21
PRK10345	210	hypothetical protein; Provisional	98.21
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.21
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.19
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.19
KOG0589	426	consensus Serine/threonine protein kinase [General	98.19
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.19
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.17
PHA03210	501	serine/threonine kinase US3; Provisional	98.16
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.15
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.15
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.14
KOG0610	459	consensus Putative serine/threonine protein kinase	98.13
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.1
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.07
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.06
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.04
PTZ00284	467	protein kinase; Provisional	98.04
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.99
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	97.98
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	97.98
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.94
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.94
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	97.87
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.86
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.85
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.84
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.83
PRK14879	211	serine/threonine protein kinase; Provisional	97.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.75
KOG0690	516	consensus Serine/threonine protein kinase [Signal	97.74
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.7
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.7
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	97.59
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.57
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.45
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.43
KOG0584	632	consensus Serine/threonine protein kinase [General	97.37
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.36
PHA02882	294	putative serine/threonine kinase; Provisional	97.33
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	97.3
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.3
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.23
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.21
smart00090	237	RIO RIO-like kinase.	97.17
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.13
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.88
KOG0696	683	consensus Serine/threonine protein kinase [Signal	96.84
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	96.82
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	96.81
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.81
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.7
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	96.63
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.51
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	96.51
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	96.48
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.26
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	96.25
PRK12274	218	serine/threonine protein kinase; Provisional	96.23
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.19
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.03
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	95.89
KOG0695	593	consensus Serine/threonine protein kinase [Signal	95.72
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	95.58
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	95.56
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	95.24
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	95.05
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	94.71
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	94.67
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.48
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	94.26
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	93.84
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	93.18
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	93.18
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	92.92
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	92.28
PF15102	146	TMEM154: TMEM154 protein family	92.07
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	92.03
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	91.94
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	91.37
KOG1243	690	consensus Protein kinase [General function predict	91.23
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	88.9
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	87.17
KOG4258	1025	consensus Insulin/growth factor receptor (contains	85.36
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	84.18
COG0661	517	AarF Predicted unusual protein kinase [General fun	83.31
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	83.19
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	81.65
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	81.56

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.92  E-value=6.5e-25  Score=172.77  Aligned_cols=100  Identities=42%  Similarity=0.814  Sum_probs=77.8

Q ss_pred             ccCC-C-CCcc-cCCChHHHHHHHHHHHhhhccCCC--CCeeeeeecCCCceEEEEEEccCCCChhhHHHHHHHHHHHHh
Q 044262           12 QTCY-D-TGNF-TTNSTYGKNRDLFLSSLASNVTAN--KGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMM   86 (399)
Q Consensus        12 ~~c~-~-~~~~-~~~~~~~~~l~~ll~~l~~~a~~~--~~f~~~~~~~~~~~vygl~~C~~d~~~~~C~~Cl~~a~~~~~   86 (399)
                      +.|+ + ..++ +++++|++||+.||++|.++++..  .+|++++.|.++++||||+||++|+++.+|..||+.|+..+.
T Consensus         2 ~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~   81 (106)
T PF01657_consen    2 HFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANIS   81 (106)
T ss_dssp             --E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHH
T ss_pred             CcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHH
Confidence            4688 4 3456 578889999999999999987654  579999988889999999999999999999999999999999


Q ss_pred             hcCCCCccEEEEeCCCCCeEEEEccccc
Q 044262           87 KNCPNQKEAISWGGMDFPCVVRYSNRSF  114 (399)
Q Consensus        87 ~~C~~~~~~~~~~~~~~~C~~ry~~~~f  114 (399)
                      +.|+..++|+||++.   |+|||++++|
T Consensus        82 ~~C~~~~g~~v~~~~---C~lRY~~~~F  106 (106)
T PF01657_consen   82 SCCPGSRGGRVWYDS---CFLRYENYPF  106 (106)
T ss_dssp             HHTTSBSSEEEEESS---EEEEEESS--
T ss_pred             HhCCCCceEEEECCC---EEEEEECCCC
Confidence            999999999999999   9999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.84  E-value=5.8e-21  Score=150.26  Aligned_cols=93  Identities=39%  Similarity=0.777  Sum_probs=76.1

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhcCCCCcceeeeecccCCCcceEEEeccCCCCChHhHHHHHHHHHHhhhhhcCCCCce
Q 044262          133 TSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGS  212 (399)
Q Consensus       133 ~~~~~~f~~~~~~ll~~l~~~a~~~~~~~~fa~~~~~~~~~~~vy~l~qC~~dl~~~~C~~Cl~~a~~~~~~~c~~~~g~  212 (399)
                      +.+ ..|+.++..||..|+..++... +.+|++++.+ .++++||||+||++||+++||..||..++..+..+|+++.|+
T Consensus        14 ~~~-~~f~~~l~~ll~~l~~~a~~~~-~~~f~~~~~~-~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~   90 (106)
T PF01657_consen   14 TDN-STFEQNLNSLLSSLVSNAASSS-SKGFATGSAG-SGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGG   90 (106)
T ss_dssp             -TT--THHHHHHHHHHHHHHHGGGTT--TEEEEEE---ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSE
T ss_pred             CCC-chHHHHHHHHHHHHHHHHhhcc-ccCcEEeecC-CCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceE
Confidence            344 4599999999999999988654 5799999875 678899999999999999999999999999999999999999


Q ss_pred             eEeCcccccccccccc
Q 044262          213 YVLGPSCIFRWEMYPF  228 (399)
Q Consensus       213 ~v~~~~C~~r~~~~~f  228 (399)
                      +|+++.|++||+.++|
T Consensus        91 ~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   91 RVWYDSCFLRYENYPF  106 (106)
T ss_dssp             EEEESSEEEEEESS--
T ss_pred             EEECCCEEEEEECCCC
Confidence            9999999999999987

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=5.1e-16  Score=148.41  Aligned_cols=92  Identities=58%  Similarity=0.943  Sum_probs=82.9

Q ss_pred             cccccChhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       308 ~~~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      ....|++.++..+|++|+..++||+|+||.||+|.+++++.||||++.....+..++|.+|+.++.+++|||||+|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            44568999999999999999999999999999999999999999998765433145699999999999999999999999


Q ss_pred             EeCC-eEEEEEeC
Q 044262          388 FEGT-ERLLIYEF  399 (399)
Q Consensus       388 ~~~~-~~~lv~Ey  399 (399)
                      .+.+ +.+|||||
T Consensus       141 ~e~~~~~~LVYEy  153 (361)
T KOG1187|consen  141 LEGGEHRLLVYEY  153 (361)
T ss_pred             ecCCceEEEEEEc
Confidence            9988 59999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.53  E-value=2.6e-14  Score=143.31  Aligned_cols=85  Identities=32%  Similarity=0.556  Sum_probs=73.7

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      ...+..+.++...+.||+|.||+||+|+..      +.+.||||.|++.... ...+|.+|+++|.+++|||||+|+|+|
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC  558 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC  558 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence            344556677778899999999999999863      2457999999887544 678999999999999999999999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      .++++++||+||
T Consensus       559 ~~~~P~~MvFEY  570 (774)
T KOG1026|consen  559 REGDPLCMVFEY  570 (774)
T ss_pred             ccCCeeEEEEEe
Confidence            999999999998

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.46  E-value=1.8e-13  Score=128.71  Aligned_cols=75  Identities=31%  Similarity=0.550  Sum_probs=61.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHh--cCCCCCccceeEEEEeCC----eEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVA--RLQHRNLVRLLGFSFEGT----ERL  394 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~--~l~H~niv~l~g~~~~~~----~~~  394 (399)
                      ...+...++||+|+||.||||++ +++.||||++..   +....|++|-.+..  .++|+||+++++.-..++    +.+
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            34566779999999999999999 568999999854   34456777766544  679999999999987766    799


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      ||+||
T Consensus       285 LVt~f  289 (534)
T KOG3653|consen  285 LVTEF  289 (534)
T ss_pred             EEeee
Confidence            99997

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.41  E-value=4e-13  Score=129.24  Aligned_cols=81  Identities=27%  Similarity=0.458  Sum_probs=72.0

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++..+...++||+|.||.|...+...+..||||+++... ...+++|.+|+++|.+++|||||+|+|+|..++++++|+
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            3445566789999999999999999777999999998764 444589999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       615 EY  616 (807)
T KOG1094|consen  615 EY  616 (807)
T ss_pred             HH
Confidence            97

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.41  E-value=2.3e-13  Score=134.81  Aligned_cols=78  Identities=26%  Similarity=0.497  Sum_probs=69.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ..+.++++||.|.||.|++|.++-    ...||||.|+.. .++.+.+|+.|..+|.+++||||++|.|+.....+.+||
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence            345678999999999999999853    457999999987 556677999999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      .||
T Consensus       709 TEy  711 (996)
T KOG0196|consen  709 TEY  711 (996)
T ss_pred             hhh
Confidence            998

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.39  E-value=1.1e-12  Score=121.46  Aligned_cols=78  Identities=29%  Similarity=0.526  Sum_probs=69.4

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .+|...+.||+|.|+.||+|.++. +..||||.+...  ..+..+-+..|+.+|++++|||||+|+.++..++..+||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            456667789999999999999854 789999999765  55666778999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        90 y   90 (429)
T KOG0595|consen   90 Y   90 (429)
T ss_pred             e
Confidence            8

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.25  E-value=4e-12  Score=121.72  Aligned_cols=83  Identities=24%  Similarity=0.444  Sum_probs=71.3

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .++...+.+...+.||+|.||.||.|.++....||+|.++... ...++|.+|+.+|.+|+|+|||+|+|+|..+++++|
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyI  278 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYI  278 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEE
Confidence            3444455566678999999999999999777799999998753 334689999999999999999999999999899999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       279 VtE~  282 (468)
T KOG0197|consen  279 VTEY  282 (468)
T ss_pred             EEEe
Confidence            9998

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.23  E-value=1.9e-11  Score=118.66  Aligned_cols=85  Identities=28%  Similarity=0.457  Sum_probs=71.7

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcCC-----cEEEEEEecC---CChhhHHHHHHHHHHHhcCCCCCccceeEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSHG-----QEIAVKRLSK---NSVQGELEFKNEVLLVARLQHRNLVRLLGF  386 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g-----~~vavK~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~  386 (399)
                      ..++...+++...++||+|+||.||+|.+..+     ..||||..+.   .......+|++|.++|++++|||||+|+|+
T Consensus       150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV  229 (474)
T KOG0194|consen  150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV  229 (474)
T ss_pred             cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            44555566777779999999999999998542     2389999875   245667899999999999999999999999


Q ss_pred             EEeCCeEEEEEeC
Q 044262          387 SFEGTERLLIYEF  399 (399)
Q Consensus       387 ~~~~~~~~lv~Ey  399 (399)
                      +....+++||||+
T Consensus       230 a~~~~Pl~ivmEl  242 (474)
T KOG0194|consen  230 AVLEEPLMLVMEL  242 (474)
T ss_pred             EcCCCccEEEEEe
Confidence            9999999999996

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.9e-11  Score=114.40  Aligned_cols=74  Identities=24%  Similarity=0.500  Sum_probs=60.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhc--CCCCCccceeEEEEeC----CeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEG----TERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~l  395 (399)
                      ..+...+.||+|.||.||+|.+ .|+.||||++...++   ..|.+|.++...  |+|+||+.|++.-..+    .++||
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             heeEEEEEecCccccceeeccc-cCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            4566789999999999999999 789999999976543   367777777664  6999999999987654    35899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |.||
T Consensus       287 vTdY  290 (513)
T KOG2052|consen  287 VTDY  290 (513)
T ss_pred             eeec
Confidence            9998

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.18  E-value=2.1e-10  Score=124.72  Aligned_cols=75  Identities=28%  Similarity=0.490  Sum_probs=62.9

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...+...++||+|+||.||+|.. .++..||||+++.....    ...|++.|++++|||||+++|++..++..+|||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            34567788999999999999997 46889999998654321    23468889999999999999999999999999998

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.17  E-value=4.3e-11  Score=114.05  Aligned_cols=74  Identities=32%  Similarity=0.624  Sum_probs=63.1

Q ss_pred             cccCcccccCceEEEEEEEcCCcE-EEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-eEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLSHGQE-IAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-ERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~g~~-vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey  399 (399)
                      ...+.||+|+||+||+|.+. |+. ||||.+.....  ...++|.+|+.+|.+++|||||+|+|+|.++. .+.|||||
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             hhhhhcccCCceeEEEEEeC-CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            34466999999999999994 555 99999976532  22568999999999999999999999999887 79999998

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.16  E-value=6.7e-11  Score=123.16  Aligned_cols=80  Identities=35%  Similarity=0.633  Sum_probs=70.2

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC--C----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH--G----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~--g----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      +.+++.....||+|.||.||+|.+.+  +    ..||||.+++. +.+...+|++|..+|++++|||||+|+|+|....+
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            35667778999999999999999854  3    24999999876 56667899999999999999999999999999999


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|++||
T Consensus       770 ~~i~ley  776 (1025)
T KOG1095|consen  770 PLILLEY  776 (1025)
T ss_pred             cEEEehh
Confidence            9999997

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=6e-11  Score=112.80  Aligned_cols=77  Identities=26%  Similarity=0.489  Sum_probs=65.4

Q ss_pred             CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIY  397 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~  397 (399)
                      .|+..++||+|.||.|||+.- ..|..||+|++.-..  ........+||.+|++|+||||++|.+...+.  ..+|||+
T Consensus       118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF  197 (560)
T KOG0600|consen  118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF  197 (560)
T ss_pred             HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence            456678999999999999985 468999999986543  34455678999999999999999999998876  6799999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       198 eY  199 (560)
T KOG0600|consen  198 EY  199 (560)
T ss_pred             ec
Confidence            98

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.12  E-value=3.1e-11  Score=107.93  Aligned_cols=76  Identities=26%  Similarity=0.441  Sum_probs=66.3

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+...++|+|+||.|||...++ |+.||||++.....  .-.+-.++||++|++++|+|||.|+.+|.....++||+||
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4556789999999999999866 89999999976533  3345689999999999999999999999999999999998

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.11  E-value=4.8e-11  Score=119.18  Aligned_cols=74  Identities=39%  Similarity=0.610  Sum_probs=59.7

Q ss_pred             CcccCcccccCceEEEEEEE-cCC----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRL-SHG----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~-~~g----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +...++||+|+||.||||.+ +.|    .+||+|.+... ..+..++++.|+..|.+++||||++|+|+|.... +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            34568999999999999987 333    36999998765 4556679999999999999999999999997654 44444


Q ss_pred             e
Q 044262          398 E  398 (399)
Q Consensus       398 E  398 (399)
                      +
T Consensus       777 q  777 (1177)
T KOG1025|consen  777 Q  777 (1177)
T ss_pred             H
Confidence            3

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.10  E-value=4.8e-11  Score=115.84  Aligned_cols=84  Identities=30%  Similarity=0.493  Sum_probs=73.4

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ++++-.+.++...++||-|.||.||.|.|+. ...||||.|+... ...++|+.|..+|+.++|||+|+|+|+|....+.
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            4455556667788999999999999999975 6789999997643 4467999999999999999999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      |||+||
T Consensus       339 YIiTEf  344 (1157)
T KOG4278|consen  339 YIITEF  344 (1157)
T ss_pred             EEEEec
Confidence            999997

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.08  E-value=1.5e-10  Score=101.81  Aligned_cols=77  Identities=27%  Similarity=0.518  Sum_probs=66.2

Q ss_pred             CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChh--hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|...++||+|.||.||+|.- ..|+.||||+++.....  -....++||+.|++++|+||+.|++++...+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            355678999999999999985 45899999999876332  235689999999999999999999999999999999997

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.06  E-value=6.8e-11  Score=102.52  Aligned_cols=79  Identities=32%  Similarity=0.532  Sum_probs=68.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .++|.+++.||+|.||.||.+..+. +-.||+|.+.+..   .+...++.+|+++-..|+||||++++|++.+....+|+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            3568889999999999999998754 6789999997642   23346799999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus       101 lEy  103 (281)
T KOG0580|consen  101 LEY  103 (281)
T ss_pred             EEe
Confidence            998

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.05  E-value=2.5e-10  Score=111.01  Aligned_cols=81  Identities=22%  Similarity=0.459  Sum_probs=66.6

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcC---C--cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSH---G--QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~---g--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      +..++.+...++||+|.||.||+|.+.+   |  .-||||.-+.. .....+.|+.|..+|++++|||||+|+|+|. ..
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~  463 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQ  463 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-cc
Confidence            3445566778999999999999999733   3  35899998764 4455778999999999999999999999995 56


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      +.|||||.
T Consensus       464 P~WivmEL  471 (974)
T KOG4257|consen  464 PMWIVMEL  471 (974)
T ss_pred             ceeEEEec
Confidence            78999984

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.05  E-value=1.3e-10  Score=111.91  Aligned_cols=78  Identities=27%  Similarity=0.451  Sum_probs=68.4

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...+.||+|.||.||||.-+. .+.||+|.+.+.  .++..+...+|++++++++|||||.++.++....++|+|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            356677899999999999998764 678999999775  44556679999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (808)
T KOG0597|consen   82 Y   82 (808)
T ss_pred             h
Confidence            7

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.03  E-value=5.2e-10  Score=104.07  Aligned_cols=78  Identities=24%  Similarity=0.459  Sum_probs=65.2

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChh-------hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ-------GELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~-------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      +.+...+.||+|+||.|-+|.- +.|+.||||.+.+....       ......+|+++|.+|+|||||++.+++..++..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            4456679999999999999975 45899999999764211       122357999999999999999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ||||||
T Consensus       252 YmVlE~  257 (475)
T KOG0615|consen  252 YMVLEY  257 (475)
T ss_pred             EEEEEE
Confidence            999997

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.99  E-value=1.1e-09  Score=106.48  Aligned_cols=78  Identities=26%  Similarity=0.466  Sum_probs=69.3

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ..|...+.||+|+|..+|++.- ..|+.||+|++.+.   .....+...+||++.+.|+|||||+|++++.+.+..|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4577789999999999999997 67999999999764   3345667999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      |+
T Consensus        98 EL   99 (592)
T KOG0575|consen   98 EL   99 (592)
T ss_pred             Ee
Confidence            95

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.93  E-value=1.1e-09  Score=106.37  Aligned_cols=82  Identities=26%  Similarity=0.483  Sum_probs=68.1

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      .+++++..+.+...+.||+|.||+||+|.+.+  .||||.|...  ..+..+.|.+|+..+++.+|.||+-|.|+|.++.
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~  461 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP  461 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence            35566666777788999999999999999943  5999999764  4456778999999999999999999999998776


Q ss_pred             eEEEEEe
Q 044262          392 ERLLIYE  398 (399)
Q Consensus       392 ~~~lv~E  398 (399)
                      . .||+-
T Consensus       462 ~-AIiTq  467 (678)
T KOG0193|consen  462 L-AIITQ  467 (678)
T ss_pred             e-eeeeh
Confidence            5 66653

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.92  E-value=2.7e-09  Score=98.17  Aligned_cols=78  Identities=27%  Similarity=0.498  Sum_probs=66.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...+.||+|+||.||+|.++    .+..||+|.++.. .......|.+|+..+.+++||||++++|++..++..+||
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            45677899999999999999864    3568999998765 333445799999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        85 ~e~   87 (266)
T cd05064          85 TEY   87 (266)
T ss_pred             EEe
Confidence            997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.90  E-value=3.4e-09  Score=103.56  Aligned_cols=84  Identities=25%  Similarity=0.355  Sum_probs=69.2

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCC-CCCccceeEEE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQ-HRNLVRLLGFS  387 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~  387 (399)
                      .+....+.|...++||+|+||.||+|....      +..||||.++.. .....+.|++|+.+|.++. |||||+++|++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            344556778889999999999999998521      346999999754 3333467999999999996 99999999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      ...+..+|||||
T Consensus       111 ~~~~~~~lv~Ey  122 (400)
T cd05105         111 TKSGPIYIITEY  122 (400)
T ss_pred             ccCCceEEEEEe
Confidence            999999999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.89  E-value=6.7e-09  Score=95.55  Aligned_cols=83  Identities=25%  Similarity=0.322  Sum_probs=72.2

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++.+++++.....||+|+||.||+|... ++..|++|.+........+.+.+|+.++..++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            4556677777789999999999999865 467899999877666666789999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        83 v~e~   86 (268)
T cd06624          83 FMEQ   86 (268)
T ss_pred             EEec
Confidence            9997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.88  E-value=7.1e-09  Score=97.39  Aligned_cols=78  Identities=29%  Similarity=0.476  Sum_probs=65.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-----------------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccce
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-----------------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRL  383 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-----------------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l  383 (399)
                      +.|...++||+|+||.||++..++                 +..||+|.+... ......+|.+|+.+|.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            456677899999999999997532                 236999998764 33445679999999999999999999


Q ss_pred             eEEEEeCCeEEEEEeC
Q 044262          384 LGFSFEGTERLLIYEF  399 (399)
Q Consensus       384 ~g~~~~~~~~~lv~Ey  399 (399)
                      ++++...+..+|||||
T Consensus        85 ~~~~~~~~~~~lv~e~  100 (304)
T cd05096          85 LGVCVDEDPLCMITEY  100 (304)
T ss_pred             EEEEecCCceEEEEec
Confidence            9999988999999997

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.88  E-value=4.3e-09  Score=96.55  Aligned_cols=74  Identities=36%  Similarity=0.662  Sum_probs=62.4

Q ss_pred             ccCcccccCceEEEEEEEc-----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          326 TDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       326 ~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+.||.|.||.||+|.+.     .+..|+||.++.. .....+.|.+|++.+.+++||||++++|++...++.++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3578999999999999986     2468999999654 344467899999999999999999999999988889999997

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=98.85  E-value=3.6e-09  Score=102.61  Aligned_cols=82  Identities=29%  Similarity=0.432  Sum_probs=67.8

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEE------cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ....++|...++||+|+||.||++..      ..+..||||.++... ....+.+.+|+.++..+ +||||++++|++..
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~  110 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV  110 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence            34455788889999999999999974      124579999997542 33445789999999999 89999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      ++..++||||
T Consensus       111 ~~~~~lv~E~  120 (375)
T cd05104         111 GGPTLVITEY  120 (375)
T ss_pred             CCcceeeehh
Confidence            9999999997

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.84  E-value=1.4e-09  Score=107.25  Aligned_cols=76  Identities=30%  Similarity=0.569  Sum_probs=63.5

Q ss_pred             CCcccCcccccCceEEEEEEEcC--Cc--EEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH--GQ--EIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~--g~--~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .+...++||+|.||.|++|.|..  |.  .||||.|+..... ...+|++|+.+|.+|+|+|+++|+|+... .+..||+
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~  189 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF  189 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence            34456899999999999999853  43  6899999876443 56789999999999999999999999976 6778888


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      |+
T Consensus       190 EL  191 (1039)
T KOG0199|consen  190 EL  191 (1039)
T ss_pred             hh
Confidence            74

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.83  E-value=1.2e-08  Score=99.10  Aligned_cols=77  Identities=21%  Similarity=0.219  Sum_probs=66.0

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .|...+.||+|+||.||++... .++.+|+|.+...   .......+.+|+.++.+++|+||+++++++...+..+||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            4667789999999999999874 4789999999653   22334578999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (381)
T cd05626          82 Y   82 (381)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.83  E-value=1.1e-08  Score=99.84  Aligned_cols=79  Identities=24%  Similarity=0.391  Sum_probs=68.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ...|.+...||+|.|+.|..+... .+..||+|.+++.  .......+.+|+++|..+.|||||+|+.+......++|||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            345677899999999999999875 4889999999876  3344456999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       135 ey  136 (596)
T KOG0586|consen  135 EY  136 (596)
T ss_pred             Ee
Confidence            98

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.83  E-value=1.1e-08  Score=98.22  Aligned_cols=77  Identities=23%  Similarity=0.304  Sum_probs=66.0

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...++||+|+||.||++... +++.||||.+... .......+.+|++++..++|+||+++++++...+..++||||
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            3455689999999999999875 4789999998654 333456799999999999999999999999999999999997

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.83  E-value=1.8e-08  Score=96.07  Aligned_cols=79  Identities=19%  Similarity=0.236  Sum_probs=68.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .++|...++||+|+||.||++... .+..+|+|.+... .......+.+|++++.+++|+||+++++++...+..+||||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            356778899999999999999876 4778999988654 33344679999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        84 ~   84 (333)
T cd06650          84 H   84 (333)
T ss_pred             c
Confidence            7

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.82  E-value=7.7e-09  Score=101.06  Aligned_cols=83  Identities=27%  Similarity=0.414  Sum_probs=68.5

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSF  388 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~  388 (399)
                      ++.+.+++...++||+|+||.||++.+..      +..||+|.++... ....+.+++|+.+|..+. |||||+++|++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            44555677788999999999999998632      3579999997542 233457899999999997 999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      .....++|+||
T Consensus       112 ~~~~~~iv~E~  122 (401)
T cd05107         112 KGGPIYIITEY  122 (401)
T ss_pred             cCCCcEEEEec
Confidence            88899999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.82  E-value=2.6e-09  Score=88.92  Aligned_cols=76  Identities=28%  Similarity=0.496  Sum_probs=63.6

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +...++||+|.||+|+|+...+ ++.||+|+.+-.  ++......++||-+++++.|+|||+|+.+...+..+-||+||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            3445899999999999998654 788999988643  333345789999999999999999999999888889999986

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.81  E-value=7.3e-09  Score=94.81  Aligned_cols=80  Identities=29%  Similarity=0.544  Sum_probs=71.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +..+|...++||+|+||.||++...++..+++|.+..........+..|+.++..++|+||+++++++...+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34557778999999999999999988889999999776655566899999999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.80  E-value=9e-09  Score=98.62  Aligned_cols=72  Identities=32%  Similarity=0.543  Sum_probs=64.4

Q ss_pred             cCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +++||.|.||.||-|... .|+.||||.+.+.  ..+....+.+|+.+|.+++||.||.|.-++...+..++|||
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME  643 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME  643 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence            689999999999999874 5999999999775  34455689999999999999999999999999999999998

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.80  E-value=6.4e-09  Score=99.28  Aligned_cols=81  Identities=25%  Similarity=0.384  Sum_probs=64.9

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG  390 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  390 (399)
                      .+.++|...++||+|+||.||++...      .+..||||.++... ......+.+|+.++.++ +||||++++|++...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP   83 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence            34566788899999999999999741      24679999997542 23345799999999999 899999999988764


Q ss_pred             -CeEEEEEeC
Q 044262          391 -TERLLIYEF  399 (399)
Q Consensus       391 -~~~~lv~Ey  399 (399)
                       ...++||||
T Consensus        84 ~~~~~lv~ey   93 (338)
T cd05102          84 NGPLMVIVEF   93 (338)
T ss_pred             CCceEEEEec
Confidence             458899997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.80  E-value=5.1e-09  Score=95.18  Aligned_cols=79  Identities=19%  Similarity=0.373  Sum_probs=63.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh--hHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l  395 (399)
                      .++|+..+.|++|.||.||+|.-+ .++.||+|+++-....  -...-++||.+|.+.+|||||.+.-+...  -+..||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            345777899999999999999864 4789999999654221  12356899999999999999999887764  366999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       155 VMe~  158 (419)
T KOG0663|consen  155 VMEY  158 (419)
T ss_pred             eHHH
Confidence            9997

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.80  E-value=1.6e-08  Score=96.33  Aligned_cols=78  Identities=23%  Similarity=0.377  Sum_probs=66.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.++.+++||||+++++.+..++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            456778999999999999999854 7899999986532   223456899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        98 e~   99 (329)
T PTZ00263         98 EF   99 (329)
T ss_pred             cC
Confidence            97

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.79  E-value=1.7e-08  Score=97.37  Aligned_cols=77  Identities=23%  Similarity=0.302  Sum_probs=66.2

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++... .++.||||.+...   .......+.+|+.+|..++|+||+++++.+..++..+||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            5777899999999999999875 4789999999653   22334568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (364)
T cd05599          82 Y   82 (364)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.79  E-value=1.2e-08  Score=98.07  Aligned_cols=80  Identities=24%  Similarity=0.293  Sum_probs=70.3

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ..++|....+||+|+||.||.++-++ |..+|+|+|++..   ....+....|-.+|...++++||+|+-.+-+.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45678899999999999999998765 8899999998763   3445678899999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       219 iMEy  222 (550)
T KOG0605|consen  219 IMEY  222 (550)
T ss_pred             EEEe
Confidence            9998

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.79  E-value=3.4e-10  Score=100.40  Aligned_cols=78  Identities=27%  Similarity=0.508  Sum_probs=63.8

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEE-EeCCe-EEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFS-FEGTE-RLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~-~~lv  396 (399)
                      .+|.+.++||+|.||.|||+.. .+|..||.|.++-.  +.+..++...|+.+|++|+|||||++.++. .+..+ +.||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            3566779999999999999974 67999999998743  445567899999999999999999999843 44455 7888


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        99 mE~  101 (375)
T KOG0591|consen   99 MEL  101 (375)
T ss_pred             HHh
Confidence            886

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.79  E-value=1.4e-08  Score=92.67  Aligned_cols=76  Identities=26%  Similarity=0.483  Sum_probs=65.9

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|...+.||+|+||.||++.++++..+|+|.+.... ....+|.+|+.++.+++||||+++++++...+..++||||
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~   80 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF   80 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence            356678899999999999999877889999886443 2345799999999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.79  E-value=1.9e-08  Score=97.65  Aligned_cols=77  Identities=27%  Similarity=0.269  Sum_probs=65.7

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++... +++.||+|.+...   .......+.+|+.++.+++||||+++++++...+..+||||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            5667899999999999999864 5789999998653   22234568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (377)
T cd05629          82 F   82 (377)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.79  E-value=2.6e-09  Score=99.21  Aligned_cols=76  Identities=20%  Similarity=0.455  Sum_probs=66.6

Q ss_pred             CcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..+.||+|.||+|-++.- ..|+.||||.+++.   ++++.-...+||++|..|+||||++++.++.+.+.+.|||||
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY  134 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY  134 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence            45568999999999999874 56999999999875   445555688999999999999999999999999999999998

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.79  E-value=3.1e-08  Score=94.36  Aligned_cols=78  Identities=19%  Similarity=0.215  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++... .+..+|+|.+... .......+.+|+++|.+++|+||+++++++...+..+|||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            56777899999999999999975 4788999998754 333456799999999999999999999999999999999997

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.78  E-value=2.5e-08  Score=93.60  Aligned_cols=78  Identities=26%  Similarity=0.460  Sum_probs=66.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... +++.+|+|.+..... .....+.+|+.+++.++||||+++.+++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            56777899999999999999975 578999999875432 2234678999999999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.77  E-value=2.4e-08  Score=95.19  Aligned_cols=77  Identities=25%  Similarity=0.383  Sum_probs=66.3

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++.... ++.||+|.+....   ......+.+|+.++..++||||+++++.+..++..+||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            46778999999999999999864 7899999996531   2334578899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (333)
T cd05600          82 Y   82 (333)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.77  E-value=3e-08  Score=90.05  Aligned_cols=72  Identities=28%  Similarity=0.545  Sum_probs=63.1

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++...++..+|+|.+.... ......|.+|+.++..++|+||+++++++...+..++||||
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEEC
Confidence            4789999999999998888899999987653 33345799999999999999999999999988899999997

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.77  E-value=1.6e-08  Score=92.59  Aligned_cols=79  Identities=24%  Similarity=0.415  Sum_probs=68.5

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++.|...+.||+|+||.||++...++..||+|.++... ...+++.+|+.++.+++|+||+++.+++...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            345677789999999999999998777889999986543 2356799999999999999999999999988899999997

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.77  E-value=1.5e-08  Score=93.76  Aligned_cols=71  Identities=28%  Similarity=0.474  Sum_probs=59.8

Q ss_pred             cccccCceEEEEEEEcC-------------------------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccce
Q 044262          329 KLGQGGFGAVYKGRLSH-------------------------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL  383 (399)
Q Consensus       329 ~iG~G~fG~Vykg~~~~-------------------------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l  383 (399)
                      +||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.++..++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997521                         13589999866544445678999999999999999999


Q ss_pred             eEEEEeCCeEEEEEeC
Q 044262          384 LGFSFEGTERLLIYEF  399 (399)
Q Consensus       384 ~g~~~~~~~~~lv~Ey  399 (399)
                      +|++......+|||||
T Consensus        82 ~~~~~~~~~~~lv~ey   97 (274)
T cd05076          82 HGVCVRGSENIMVEEF   97 (274)
T ss_pred             EEEEEeCCceEEEEec
Confidence            9999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.77  E-value=2e-08  Score=92.95  Aligned_cols=79  Identities=27%  Similarity=0.397  Sum_probs=70.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++|...+.||+|+||.||++... ++..+++|.+........+.|.+|++++.+++|+||+++++.+..++..++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            456777899999999999999975 4789999999776666667899999999999999999999999999999999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.77  E-value=2.6e-08  Score=92.81  Aligned_cols=78  Identities=26%  Similarity=0.421  Sum_probs=65.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... ++..||+|.++... ......+.+|+.++.+++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            34677899999999999999875 47899999986542 22344688999999999999999999999888889999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.76  E-value=2.8e-08  Score=96.61  Aligned_cols=77  Identities=23%  Similarity=0.257  Sum_probs=65.8

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .|...++||+|+||.||++... .++.+|+|.+....   ......+.+|+.++.+++|+|||++++.+...+..+||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            4667889999999999999874 47889999986532   2334578899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (382)
T cd05625          82 Y   82 (382)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.76  E-value=1.5e-09  Score=102.68  Aligned_cols=77  Identities=27%  Similarity=0.478  Sum_probs=64.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHH--HHHHHHHHhcCC-CCCccceeEEEEeCC-eEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELE--FKNEVLLVARLQ-HRNLVRLLGFSFEGT-ERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~--f~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lv  396 (399)
                      ++|...++||.|.||.||+|+-.. +..||||++++.... +++  -+||+..|++|. |||||+|..++.+.+ .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            345667899999999999999754 788999999765322 333  578999999999 999999999999888 89999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        89 fE~   91 (538)
T KOG0661|consen   89 FEF   91 (538)
T ss_pred             HHh
Confidence            997

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.76  E-value=2.9e-08  Score=93.48  Aligned_cols=78  Identities=26%  Similarity=0.431  Sum_probs=65.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++..+ .+..||+|.++... ......+.+|+.++.+++|+||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            34677789999999999999875 47789999987542 22334688999999999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.76  E-value=4.2e-08  Score=90.12  Aligned_cols=78  Identities=23%  Similarity=0.402  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||+|... +++.+|+|.+..........+.+|+.++.+++|+||+++++.+...+..++|+||
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            45777899999999999999974 5788999998765444455688999999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.76  E-value=3.1e-08  Score=91.02  Aligned_cols=78  Identities=28%  Similarity=0.546  Sum_probs=66.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...+.||+|+||.||+|.++.    ...|++|.++.. ......+|.+|+.++.+++|+||+++.+.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            457778999999999999999743    357999998754 334456799999999999999999999999888899999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        84 ~e~   86 (266)
T cd05033          84 TEY   86 (266)
T ss_pred             EEc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.75  E-value=2.1e-08  Score=93.19  Aligned_cols=77  Identities=21%  Similarity=0.357  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||+|+||.||++..+. ++.+|+|++....  ....+.+.+|+.++..++|+||+++.+++...+..+|||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            46778899999999999999864 7889999987542  23345688999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.75  E-value=4.8e-08  Score=91.99  Aligned_cols=77  Identities=19%  Similarity=0.187  Sum_probs=66.2

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...++||+|+||.||++... .+..+++|.+... ......++.+|++++.+++||||+++++.+..++..+||+||
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            5777899999999999999875 4778899988654 333445789999999999999999999999999999999997

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.74  E-value=1.4e-08  Score=98.56  Aligned_cols=82  Identities=29%  Similarity=0.447  Sum_probs=67.6

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ....++|...++||+|+||.||++...      .+..||+|.++.. .......+.+|+.++..+ +|+|||+++|++..
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            344567888899999999999998742      2357999999754 333345789999999999 89999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      .+..+|||||
T Consensus       114 ~~~~~lv~ey  123 (374)
T cd05106         114 GGPVLVITEY  123 (374)
T ss_pred             CCCeEEeHhh
Confidence            9999999997

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.74  E-value=2.9e-08  Score=94.93  Aligned_cols=78  Identities=24%  Similarity=0.318  Sum_probs=65.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC--CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH--GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~--g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||++....  +..||+|.+...   .....+.+.+|+.++..++||||+++++++...+..+||
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            457778999999999999998644  358999998643   223345788999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       110 ~Ey  112 (340)
T PTZ00426        110 LEF  112 (340)
T ss_pred             EeC
Confidence            997

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.74  E-value=1.7e-08  Score=94.21  Aligned_cols=77  Identities=19%  Similarity=0.280  Sum_probs=65.7

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++... .++.+|+|.+....   ....+.+.+|+.++.+++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            4667789999999999999975 47899999986432   2334568899999999999999999999988899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (291)
T cd05612          82 Y   82 (291)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA02988 hypothetical protein; Provisional

Probab=98.74  E-value=3.6e-08  Score=91.72  Aligned_cols=72  Identities=19%  Similarity=0.346  Sum_probs=60.7

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCCChhh---HHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQG---ELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey  399 (399)
                      ...||+|++|.||+|.+ +|+.||||.++......   .+.|.+|+.+|.+++|||||+++|++..    ....+|||||
T Consensus        25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            36799999999999998 68899999997643222   4578899999999999999999999876    3467899997

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.73  E-value=3.6e-08  Score=95.60  Aligned_cols=77  Identities=21%  Similarity=0.236  Sum_probs=65.6

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .|...++||+|+||.||++... .++.+|+|.+.+..   ......+.+|+.+|.+++|+||+++++.+..++..+||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            4677899999999999999875 47899999986532   2234568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (376)
T cd05598          82 Y   82 (376)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.73  E-value=3.5e-08  Score=91.59  Aligned_cols=77  Identities=35%  Similarity=0.550  Sum_probs=65.0

Q ss_pred             CCcccCcccccCceEEEEEEE-----cCCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .|+..++||+|+||.||+|..     ..+..+++|.+... .......|.+|+.+++.++|+||+++++++..++..++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   85 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML   85 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence            466678999999999999985     23568999999754 334446799999999999999999999999988999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        86 ~e~   88 (283)
T cd05090          86 FEY   88 (283)
T ss_pred             EEc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.73  E-value=2.5e-08  Score=91.29  Aligned_cols=78  Identities=31%  Similarity=0.467  Sum_probs=67.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++|...++||+|+||.||++...++..|++|.+.... ...+.+.+|+.++..++|+||+++++.+...+..+++|||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            34577789999999999999998888889999986543 2356799999999999999999999999888889999996

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.73  E-value=6.6e-08  Score=89.60  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..++||+|+||.||++... .+..+|+|.+... .....+++.+|+.++.+++||||+++++.+...+..+||+||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            4566789999999999999863 5788999998654 334456799999999999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.72  E-value=3.9e-08  Score=89.97  Aligned_cols=79  Identities=27%  Similarity=0.478  Sum_probs=68.7

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..++|...++||+|+||.||++..+++..+++|.+.... ...+++.+|+.++.+++|+||+++++++......++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            456778889999999999999998777889999987543 2346799999999999999999999999888889999996

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.71  E-value=2.8e-08  Score=90.83  Aligned_cols=76  Identities=28%  Similarity=0.477  Sum_probs=65.3

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||+|+||.||++...++..+|+|.+.... ....+|.+|+.++.+++||||+++++++...+..+++|||
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY   80 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence            355678899999999999998777789999987543 2345799999999999999999999999888889999997

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.71  E-value=5.6e-08  Score=90.68  Aligned_cols=79  Identities=27%  Similarity=0.434  Sum_probs=70.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.|...++||+|+||.||++.... +..+++|.+........+.+.+|+.++..++|+||+++++.+......++||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            3557778899999999999999854 789999999877666677899999999999999999999999988999999997

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.71  E-value=4e-08  Score=91.45  Aligned_cols=76  Identities=28%  Similarity=0.389  Sum_probs=64.1

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..++||+|+||.||++... +++.||+|.+.....   .....+.+|+.++..++|+||+++.+.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            556789999999999999874 578999999865321   2234578999999999999999999999888999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.71  E-value=3.7e-08  Score=93.47  Aligned_cols=80  Identities=24%  Similarity=0.428  Sum_probs=64.9

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh--------------hHHHHHHHHHHHhcCCCCCcccee
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--------------GELEFKNEVLLVARLQHRNLVRLL  384 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~--------------~~~~f~~E~~~l~~l~H~niv~l~  384 (399)
                      ..+.|.+...||+|.||.|-++.-. +++.||||.|.+....              ..+...+||.+|++++|+|||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            4466788899999999999999853 5889999999653211              124688999999999999999999


Q ss_pred             EEEEeC--CeEEEEEeC
Q 044262          385 GFSFEG--TERLLIYEF  399 (399)
Q Consensus       385 g~~~~~--~~~~lv~Ey  399 (399)
                      .+.-++  +.+|||+||
T Consensus       175 EvLDDP~s~~~YlVley  191 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEY  191 (576)
T ss_pred             EeecCcccCceEEEEEe
Confidence            987553  569999998

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.71  E-value=5.1e-08  Score=94.12  Aligned_cols=78  Identities=22%  Similarity=0.266  Sum_probs=66.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|+..++||+|+||.||++... .++.+|+|.+....   ......+.+|+.++.+++|+||+++++.+...+..+|||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            35677899999999999999875 47899999996532   223356888999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        81 E~   82 (363)
T cd05628          81 EF   82 (363)
T ss_pred             cC
Confidence            97

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.70  E-value=5.3e-08  Score=88.63  Aligned_cols=72  Identities=28%  Similarity=0.558  Sum_probs=62.3

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... +++.+|+|.+... .......|.+|++++..++|+||+++++++......+||+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   74 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL   74 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEee
Confidence            46899999999999875 5888999987654 334456799999999999999999999999988899999997

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=98.70  E-value=7.2e-09  Score=100.14  Aligned_cols=73  Identities=29%  Similarity=0.487  Sum_probs=61.5

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++.+.+...+.||.|+-|.||.|.+ .++.||||+++...       ..+|+.|++|+|+||+.|.|+|....-.+||||
T Consensus       121 iPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  121 IPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             CCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence            3334455678999999999999999 56889999875432       357889999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       193 f  193 (904)
T KOG4721|consen  193 F  193 (904)
T ss_pred             c
Confidence            8

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=98.70  E-value=5.2e-08  Score=89.89  Aligned_cols=76  Identities=24%  Similarity=0.283  Sum_probs=66.5

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-eEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-ERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey  399 (399)
                      +...++||+|..|.|||+.++. ++.+|+|.+... +....++..+|++++.+.+||+||+++|++.... +..|+|||
T Consensus        81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            4456899999999999999864 788999999544 5566778999999999999999999999999888 59999998

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.70  E-value=7.9e-08  Score=88.22  Aligned_cols=78  Identities=24%  Similarity=0.465  Sum_probs=66.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +++.||||.+...   .......+.+|+++++.++||||+++++.+...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            45777899999999999999875 5789999987642   3344457899999999999999999999999889999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (267)
T cd08228          82 EL   83 (267)
T ss_pred             Ee
Confidence            97

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.70  E-value=4.8e-08  Score=90.88  Aligned_cols=76  Identities=28%  Similarity=0.360  Sum_probs=64.2

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... +++.||+|.+....   ......+.+|+.++.+++|+||+++.+.+...+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            556789999999999999874 58899999986532   22234688999999999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.70  E-value=4e-08  Score=91.39  Aligned_cols=79  Identities=34%  Similarity=0.579  Sum_probs=66.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      .++|...+.||+|+||.||++..+      .+..+|+|.+... ......+|.+|+.++.+++||||+++++++..++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            456778899999999999999863      3568999998754 334456799999999999999999999999988889


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        84 ~lv~e~   89 (288)
T cd05050          84 CLLFEY   89 (288)
T ss_pred             EEEEec
Confidence            999997

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.69  E-value=6.8e-08  Score=91.65  Aligned_cols=72  Identities=24%  Similarity=0.221  Sum_probs=61.6

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... +++.+|+|.++..   .......+.+|+.++.+++||||+++.+.+...+..+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   76 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEY   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeC
Confidence            46899999999999875 5889999998753   223345688999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.69  E-value=4.2e-08  Score=91.37  Aligned_cols=81  Identities=30%  Similarity=0.550  Sum_probs=66.7

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      ...++|...++||+|+||.||+|...+      +..||+|.+.... ......+.+|+.++..++|+||+++++.+...+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            345667888999999999999997532      4479999886542 233456889999999999999999999998888


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++||||
T Consensus        83 ~~~lv~e~   90 (288)
T cd05061          83 PTLVVMEL   90 (288)
T ss_pred             CcEEEEeC
Confidence            99999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.69  E-value=5e-08  Score=94.50  Aligned_cols=76  Identities=20%  Similarity=0.352  Sum_probs=64.3

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l  395 (399)
                      |+..++||+|+||.||++... +++.||+|.+...  .....+.+.+|++++..++|+||+++++++...+     ..++
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            667899999999999999864 5889999998653  2234467899999999999999999999987766     7899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        82 v~e~   85 (372)
T cd07853          82 VTEL   85 (372)
T ss_pred             Eeec
Confidence            9997

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.69  E-value=4.6e-08  Score=94.18  Aligned_cols=79  Identities=28%  Similarity=0.495  Sum_probs=68.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChh---hHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l  395 (399)
                      ...|...+.||+|.||.||++..+. |+.+|+|.+.+....   ....+.+|+.+|.++. |||||.+.+.+...+..+|
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            3456677999999999999999866 899999999775332   3458999999999998 9999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |||+
T Consensus       114 vmEL  117 (382)
T KOG0032|consen  114 VMEL  117 (382)
T ss_pred             EEEe
Confidence            9996

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.69  E-value=8e-08  Score=87.53  Aligned_cols=76  Identities=32%  Similarity=0.527  Sum_probs=65.4

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      |...+.||+|+||.||+|... ++..|++|.+....     .+..+.+.+|+.++..++|+||+++.+++..++..++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            455689999999999999986 68899999986532     234567999999999999999999999999889999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (258)
T cd06632          82 EL   83 (258)
T ss_pred             Ee
Confidence            97

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.69  E-value=4.1e-08  Score=90.81  Aligned_cols=80  Identities=33%  Similarity=0.592  Sum_probs=66.8

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      ..++|+..++||+|+||.||++...      .+..||+|.+... ......+|.+|+.++..++|+||+++++++..+..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4566888899999999999998753      2457999998653 23345679999999999999999999999988889


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus        84 ~~lv~e~   90 (277)
T cd05062          84 TLVIMEL   90 (277)
T ss_pred             eEEEEec
Confidence            9999997

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.69  E-value=2.6e-08  Score=91.77  Aligned_cols=79  Identities=23%  Similarity=0.385  Sum_probs=68.4

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .++|...++||+|+||+|+....++ ++..|+|.+++.   .....+....|..+|.+++||.||+|+-.+..++.++||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4578889999999999999988755 788999999775   233456788999999999999999999998889999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus       104 ld~  106 (357)
T KOG0598|consen  104 LDY  106 (357)
T ss_pred             Eec
Confidence            997

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.68  E-value=7.2e-08  Score=91.49  Aligned_cols=72  Identities=24%  Similarity=0.224  Sum_probs=61.6

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++... +|..||+|.++..   .......+.+|+.++..++||||+++.+.+...+..+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~   76 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   76 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeC
Confidence            46899999999999864 5889999999753   223345678999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.68  E-value=4.1e-08  Score=95.05  Aligned_cols=80  Identities=24%  Similarity=0.237  Sum_probs=67.1

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ..++|...++||+|+||.||++... .+..+|+|.+...   .......+.+|+.++..++||||+++++++..++..+|
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            3456778899999999999999875 4789999998642   22233457899999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       121 v~Ey  124 (370)
T cd05596         121 VMEY  124 (370)
T ss_pred             EEcC
Confidence            9997

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.68  E-value=7.7e-08  Score=89.25  Aligned_cols=78  Identities=28%  Similarity=0.537  Sum_probs=65.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  394 (399)
                      .++...+.||+|+||.||++.++     .+..|++|.+........+.|.+|++++..++|+||+++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            35667789999999999999853     4678999999776666667899999999999999999999987543  4588


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      ||+||
T Consensus        84 lv~e~   88 (284)
T cd05081          84 LVMEY   88 (284)
T ss_pred             EEEEe
Confidence            99997

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.68  E-value=6e-08  Score=89.18  Aligned_cols=78  Identities=23%  Similarity=0.477  Sum_probs=65.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .+|...+.||+|+||.||+|....    +..+|+|.++.. .....+.|.+|+.++..++||||+++.+++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            356677999999999999998642    336999998654 233456799999999999999999999999988999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        84 ~e~   86 (267)
T cd05066          84 TEY   86 (267)
T ss_pred             EEc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.68  E-value=5.1e-08  Score=94.41  Aligned_cols=83  Identities=20%  Similarity=0.225  Sum_probs=68.8

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      +....++|...++||+|+||.||++.... ++.+|+|.+.+.   .......+.+|+.++..++||||+++++++..++.
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            33445678888999999999999999854 788999998642   22234468899999999999999999999999999


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus       118 ~~lv~Ey  124 (370)
T cd05621         118 LYMVMEY  124 (370)
T ss_pred             EEEEEcC
Confidence            9999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.68  E-value=4.6e-08  Score=90.47  Aligned_cols=78  Identities=29%  Similarity=0.631  Sum_probs=66.4

Q ss_pred             CCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      .+|...+.||+|+||.||++...+      +..||+|.+...... ..+.|.+|++++.+++|+||+++.+++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            346667899999999999998643      368999999765433 4568999999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        85 lv~e~   89 (280)
T cd05049          85 MVFEY   89 (280)
T ss_pred             EEEec
Confidence            99997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.68  E-value=7.8e-08  Score=91.59  Aligned_cols=77  Identities=22%  Similarity=0.292  Sum_probs=65.5

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++.... ++.+|+|.+.+.   .....+.+.+|+.++..++|+||+++.+++..++..+||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            56678999999999999999754 789999998642   22234568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (331)
T cd05597          82 Y   82 (331)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.67  E-value=6.8e-08  Score=89.57  Aligned_cols=76  Identities=28%  Similarity=0.445  Sum_probs=66.5

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..++||+|+||.||++.... +..+++|.+........+.+.+|++++..++|+||+++.+.+..++..++|+||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            3456889999999999999864 678899998766666667899999999999999999999999999999999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.67  E-value=8.2e-08  Score=90.00  Aligned_cols=78  Identities=27%  Similarity=0.445  Sum_probs=65.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... .+..||+|.+.... ......+.+|+.++.+++|+||+++++++...+..++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            34667789999999999999875 47889999986542 22344678999999999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.67  E-value=7.5e-08  Score=88.63  Aligned_cols=72  Identities=36%  Similarity=0.542  Sum_probs=60.5

Q ss_pred             CcccccCceEEEEEEEcC---CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||+|...+   +..+++|.++... ......+.+|+.++..++||||++++|++......++||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   76 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEF   76 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEEC
Confidence            368999999999998754   3568999886543 33345789999999999999999999999888889999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.67  E-value=6.3e-08  Score=89.93  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..++||+|+||.||++... ++..+|+|.+... .....+.+.+|++++..++|+||+++++.+...+..+|||||
T Consensus         6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4566789999999999999875 4788999988654 233456799999999999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.67  E-value=1.1e-07  Score=88.04  Aligned_cols=76  Identities=21%  Similarity=0.422  Sum_probs=65.0

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|+||.||++... ++..+|+|.+.... ......+.+|+.++.+++|+||+++++++..++..++||||
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            556788999999999999864 57899999886542 33445789999999999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.67  E-value=9.6e-08  Score=90.87  Aligned_cols=72  Identities=24%  Similarity=0.224  Sum_probs=61.9

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++... ++..+|+|.+...   .......+.+|+.++..++||||+++.+.+...+..+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey   76 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEY   76 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeC
Confidence            46899999999999864 4889999999753   223345788999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.66  E-value=1.1e-07  Score=86.78  Aligned_cols=79  Identities=20%  Similarity=0.412  Sum_probs=69.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++|...++||+|+||.||++... .+..+++|.+........+.+.+|+.++..++||||+++++.+...+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            356777899999999999999875 4678999999776555567899999999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.66  E-value=7.4e-08  Score=87.89  Aligned_cols=76  Identities=33%  Similarity=0.599  Sum_probs=66.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|.||.||++.. .++.|++|.+..... ..+.+.+|+.++.+++|+||+++++++...+..++||||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            4567789999999999999987 478899999976543 456899999999999999999999999888889999996

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.66  E-value=1.3e-07  Score=86.77  Aligned_cols=76  Identities=32%  Similarity=0.552  Sum_probs=64.8

Q ss_pred             CcccCcccccCceEEEEEEEcCCcEEEEEEecCCC------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      |...+.||+|.||.||++...+++.+|+|.++...      ......+.+|++++..++|+||+++.+++...+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            45678999999999999988778899999886432      122346889999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (265)
T cd06631          82 EF   83 (265)
T ss_pred             ec
Confidence            97

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.66  E-value=6.9e-08  Score=88.68  Aligned_cols=78  Identities=23%  Similarity=0.436  Sum_probs=67.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... +++.+++|.++.........+.+|+.++..++||||+++++.+...+..++|+||
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            35666789999999999999874 4788999998765544455688999999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.65  E-value=6.5e-08  Score=88.98  Aligned_cols=77  Identities=27%  Similarity=0.518  Sum_probs=65.4

Q ss_pred             CCcccCcccccCceEEEEEEEcC-C---cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-G---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .+...+.||+|+||.||+|.... +   ..|++|.+... ......+|..|+.+++.++||||+++.+++..+...++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            35567899999999999999753 2   36999998754 4445668999999999999999999999998888999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        85 e~   86 (269)
T cd05065          85 EF   86 (269)
T ss_pred             ec
Confidence            97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.65  E-value=1.2e-07  Score=86.93  Aligned_cols=78  Identities=27%  Similarity=0.489  Sum_probs=67.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +++.+++|.++..   .....+.+.+|++++.+++|+|++++++.+...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46777899999999999999986 6889999988642   2333567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (267)
T cd08224          82 EL   83 (267)
T ss_pred             ec
Confidence            97

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.65  E-value=6.2e-08  Score=88.67  Aligned_cols=78  Identities=31%  Similarity=0.475  Sum_probs=65.7

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+.|...++||+|+||.||++..++++.+|+|.+..... ....|.+|+.++..++|+||+++.++. ..+..++++||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence            3456777899999999999999988889999999875432 345799999999999999999999886 45668999986

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.65  E-value=9.6e-08  Score=90.16  Aligned_cols=70  Identities=23%  Similarity=0.229  Sum_probs=60.3

Q ss_pred             ccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++...+ ++.||+|.+...   .......+.+|+.++.+++||||+++++.+...+..+|||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcC
Confidence            6999999999998754 788999998653   233345788999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.65  E-value=7.5e-08  Score=88.43  Aligned_cols=72  Identities=24%  Similarity=0.439  Sum_probs=60.3

Q ss_pred             CcccccCceEEEEEEEcC-------------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          328 NKLGQGGFGAVYKGRLSH-------------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-------------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +.||+|+||.||+|.+..             ...|++|.+..........|..|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998632             2258999887655455567899999999999999999999999888899


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        81 lv~e~   85 (262)
T cd05077          81 MVEEF   85 (262)
T ss_pred             EEEec
Confidence            99997

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.64  E-value=7.7e-08  Score=93.16  Aligned_cols=85  Identities=21%  Similarity=0.221  Sum_probs=70.5

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      .++....++|...+.||+|+||.||++.... ++.+|+|.+...   .......+.+|+.++..++||||+++++.+..+
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            4445556788889999999999999999864 788999998642   222334578899999999999999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..++||||
T Consensus       116 ~~~~lv~Ey  124 (371)
T cd05622         116 RYLYMVMEY  124 (371)
T ss_pred             CEEEEEEcC
Confidence            999999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.64  E-value=1.3e-07  Score=88.65  Aligned_cols=78  Identities=27%  Similarity=0.437  Sum_probs=68.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..|...+.||+|+||.||++... ++..||+|.+........+.+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            55777899999999999999864 5889999999765545556789999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.64  E-value=7.2e-08  Score=89.20  Aligned_cols=80  Identities=36%  Similarity=0.658  Sum_probs=67.1

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      .+++|...+.||+|+||.||++...+      +..|++|.+... .......|.+|+.++..++|+||+++++++...+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            34567888999999999999998853      457899988654 33344579999999999999999999999988888


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus        84 ~~lv~e~   90 (277)
T cd05036          84 RFILLEL   90 (277)
T ss_pred             cEEEEec
Confidence            9999997

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.64  E-value=6.2e-08  Score=90.57  Aligned_cols=78  Identities=28%  Similarity=0.466  Sum_probs=64.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC---------------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH---------------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLG  385 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~---------------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g  385 (399)
                      ..|...++||+|+||.||++...+               ...||+|.+... .......|.+|++++.+++|+||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            456778999999999999886532               235899998654 3344567999999999999999999999


Q ss_pred             EEEeCCeEEEEEeC
Q 044262          386 FSFEGTERLLIYEF  399 (399)
Q Consensus       386 ~~~~~~~~~lv~Ey  399 (399)
                      ++...+..++||||
T Consensus        85 ~~~~~~~~~lv~e~   98 (295)
T cd05097          85 VCVSDDPLCMITEY   98 (295)
T ss_pred             EEcCCCccEEEEec
Confidence            99988999999997

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.64  E-value=1.1e-07  Score=89.57  Aligned_cols=79  Identities=27%  Similarity=0.442  Sum_probs=66.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ...|...++||+|.||.||++... +++.|++|.+...   .....+++.+|++++..++||||+++.+++...+..+||
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            345777899999999999999875 4789999998643   223345789999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        94 ~e~   96 (307)
T cd06607          94 MEY   96 (307)
T ss_pred             HHh
Confidence            986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.64  E-value=1e-07  Score=88.26  Aligned_cols=77  Identities=31%  Similarity=0.547  Sum_probs=65.7

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..++||+|++|.||++... ++..|++|.++.... .....+.+|+.++.+++|+||+++++.+...+..+|||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence            3567789999999999999985 478999999875432 2345678899999999999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.64  E-value=1.1e-07  Score=87.42  Aligned_cols=72  Identities=32%  Similarity=0.508  Sum_probs=59.7

Q ss_pred             CcccccCceEEEEEEEcC---CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH---GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||+|...+   ...+++|.+... .......|++|+.+++.++|+||+++++.+...+..+|||||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~   76 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEF   76 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEe
Confidence            368999999999998644   346888887644 233345789999999999999999999999989999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.63  E-value=1.3e-07  Score=89.59  Aligned_cols=72  Identities=33%  Similarity=0.406  Sum_probs=60.4

Q ss_pred             CcccccCceEEEEEEE----cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++..    ..|+.+|+|.+....  ......+..|++++.+++||||+++++.+..++..+|||||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence            5799999999998864    247899999997532  22334678899999999999999999999999999999997

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.63  E-value=9.6e-08  Score=88.93  Aligned_cols=78  Identities=29%  Similarity=0.565  Sum_probs=67.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .+|...+.||+|+||.||++...      ++..+++|.+........+.+.+|++++.+++|+||+++.+++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            45677899999999999999752      235689999877665566789999999999999999999999998899999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        85 v~e~   88 (288)
T cd05093          85 VFEY   88 (288)
T ss_pred             EEEc
Confidence            9997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.63  E-value=4.8e-08  Score=89.76  Aligned_cols=77  Identities=31%  Similarity=0.523  Sum_probs=63.9

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCC-ccceeEEEEeCC------e
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRN-LVRLLGFSFEGT------E  392 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~------~  392 (399)
                      .|...++||+|.||.||+|..+ .|..||+|++.-...  .-.....+|+.++.+++|+| ||+|.+++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            3455678999999999999864 488999999976533  23345799999999999999 999999998876      7


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      ++||+||
T Consensus        92 l~lvfe~   98 (323)
T KOG0594|consen   92 LYLVFEF   98 (323)
T ss_pred             EEEEEEe
Confidence            8899997

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.63  E-value=7.3e-08  Score=89.52  Aligned_cols=77  Identities=19%  Similarity=0.297  Sum_probs=66.6

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..+.||+|+||.||++... .+..+|+|.+... .......+.+|+.++.+++|+||+++++.+...+..++|+||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            4667789999999999999986 5889999988654 334456799999999999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.63  E-value=1.1e-07  Score=90.47  Aligned_cols=77  Identities=18%  Similarity=0.210  Sum_probs=65.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++... .++.+|+|.+.+.   .......+..|+.++..++|+||+++.+++...+..+||||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            5677899999999999999875 4778999998653   22233458889999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 y   82 (331)
T cd05624          82 Y   82 (331)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.63  E-value=1.3e-07  Score=89.62  Aligned_cols=72  Identities=29%  Similarity=0.432  Sum_probs=60.5

Q ss_pred             CcccccCceEEEEEEEc----CCcEEEEEEecCC----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++...    .++.||+|.++..    .......+..|+.+|..++||||+++++.+..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            67999999999998752    4678999998653    122334678999999999999999999999999999999997

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.63  E-value=1.1e-07  Score=88.67  Aligned_cols=78  Identities=28%  Similarity=0.494  Sum_probs=65.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++..+ +++.||+|.+..... .....+.+|+.++..++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            45677789999999999999875 478999999865422 2234578899999999999999999999989999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=1.1e-08  Score=99.22  Aligned_cols=76  Identities=29%  Similarity=0.477  Sum_probs=65.4

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |.....||.|+||.||-+.-. +.+.||||++.-.   +...+.+.+.|+..|.+++|||++...|++.....-||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            555678999999999998753 4678999998654   334567899999999999999999999999999999999998

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.63  E-value=9.5e-08  Score=88.44  Aligned_cols=79  Identities=24%  Similarity=0.439  Sum_probs=65.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~  393 (399)
                      .++|...++||+|+||.||+|...+     +..|++|.+... .......+.+|+.++.+++|+||+++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4567778999999999999999865     678999998754 34445679999999999999999999998876 4667


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        85 ~~~~~~   90 (280)
T cd05043          85 FVLYPY   90 (280)
T ss_pred             EEEEEc
Confidence            888876

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.63  E-value=1.4e-07  Score=99.03  Aligned_cols=78  Identities=19%  Similarity=0.367  Sum_probs=66.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... .++.||+|++...   .....+.|.+|++++.+++||||+++++++..++..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            35677899999999999999875 4789999998653   2233457999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 EY   83 (932)
T PRK13184         82 PY   83 (932)
T ss_pred             Ec
Confidence            97

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.63  E-value=1.1e-07  Score=88.47  Aligned_cols=79  Identities=27%  Similarity=0.426  Sum_probs=66.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.+|...+.||+|+||.||++... ++..+++|.+..... .....+.+|+.++..++|+||+++.+++..++..++|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            456778899999999999999874 478999999865422 223467899999999999999999999998889999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        84 ~   84 (291)
T cd07870          84 Y   84 (291)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.62  E-value=1.3e-07  Score=85.99  Aligned_cols=76  Identities=22%  Similarity=0.368  Sum_probs=65.8

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... ++..+++|.+...  .......+.+|++++++++|+||+++++.+...+..++|+||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            556789999999999999975 4789999998643  344566899999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.61  E-value=6.5e-08  Score=92.64  Aligned_cols=80  Identities=25%  Similarity=0.429  Sum_probs=64.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEE------cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC-
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG-  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-  390 (399)
                      +.++|...++||+|+||.||++..      ..++.||||.++... ......+.+|+.++.++ +|+||+++++++... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            345678889999999999999973      236789999997542 23345788999999999 789999999988654 


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      ...+++|||
T Consensus        85 ~~~~lv~ey   93 (343)
T cd05103          85 GPLMVIVEF   93 (343)
T ss_pred             CceEEEEec
Confidence            567899997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.61  E-value=1.1e-07  Score=90.54  Aligned_cols=76  Identities=18%  Similarity=0.456  Sum_probs=61.8

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l  395 (399)
                      |...++||+|+||.||++... ++..||+|.+...  .......+.+|+.++.+++||||+++.+++...+     ..+|
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            556789999999999999865 4789999998643  2233456899999999999999999999876432     4799


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        82 v~e~   85 (338)
T cd07859          82 VFEL   85 (338)
T ss_pred             EEec
Confidence            9997

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.61  E-value=1.6e-07  Score=87.12  Aligned_cols=76  Identities=34%  Similarity=0.547  Sum_probs=64.8

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... ++..|++|.+....  ....+.+.+|+.++..++|+||+++++++..++..++|+||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            556789999999999999975 48899999986432  22345788999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.61  E-value=1.5e-07  Score=87.77  Aligned_cols=76  Identities=28%  Similarity=0.409  Sum_probs=63.3

Q ss_pred             CcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      |...+.||+|+||.||+|...      ....+++|.+.... ......+.+|+.++..++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            566789999999999999853      12468999886543 33456799999999999999999999999988889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        82 ~e~   84 (290)
T cd05045          82 VEY   84 (290)
T ss_pred             EEe
Confidence            997

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.61  E-value=8e-08  Score=89.09  Aligned_cols=77  Identities=31%  Similarity=0.557  Sum_probs=65.3

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||+|+||.||++... ++..|+||.+....  ......+.+|++++.+++|+||+++++++...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            3667789999999999999875 47899999886432  22335789999999999999999999999988999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.61  E-value=1.4e-07  Score=91.03  Aligned_cols=77  Identities=22%  Similarity=0.281  Sum_probs=65.5

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++... .++.+|+|.+...   .......+..|+.++..++|+||+++++.+...+..+||||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            4667789999999999999875 4789999999643   22234568889999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (360)
T cd05627          82 F   82 (360)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.61  E-value=7.4e-08  Score=92.32  Aligned_cols=77  Identities=25%  Similarity=0.311  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++... +++.||+|.+....   ......+..|+.++..++|+||+++++.+..++..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            4667889999999999999975 48899999996531   1334578899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (350)
T cd05573          82 Y   82 (350)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.61  E-value=6.2e-08  Score=89.89  Aligned_cols=77  Identities=25%  Similarity=0.430  Sum_probs=65.8

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..++||+|+||.||++..++ ++.+|+|.+....  ....+.+.+|++++..++|+||+++++++..++..++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            46677999999999999999864 7899999886532  22345788999999999999999999999989999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.61  E-value=1.6e-07  Score=87.05  Aligned_cols=78  Identities=31%  Similarity=0.556  Sum_probs=67.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .++...++||+|+||.||++...      .+..+++|.+..........|.+|++++..++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45667799999999999999742      245799999877666667789999999999999999999999998888999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ++||
T Consensus        85 v~e~   88 (280)
T cd05092          85 VFEY   88 (280)
T ss_pred             EEec
Confidence            9997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.61  E-value=1.6e-08  Score=100.22  Aligned_cols=76  Identities=32%  Similarity=0.624  Sum_probs=62.4

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l  395 (399)
                      +...+.||+|+||.||+|..+ .|+.||||.+... .....+.+.+|+++|++++|+|||++++.-...      ....|
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            345688999999999999964 5999999998764 344456799999999999999999999876543      35788


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        95 vmEy   98 (732)
T KOG4250|consen   95 VMEY   98 (732)
T ss_pred             EEee
Confidence            9987

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.60  E-value=2.1e-07  Score=86.09  Aligned_cols=77  Identities=22%  Similarity=0.434  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|+..++||+|+||.||++... .+..||+|.+.... ......+.+|+.++..++|+||+++++.+...+..+|||||
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            3555688999999999999875 47889999987542 34456799999999999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.60  E-value=1.4e-07  Score=89.74  Aligned_cols=77  Identities=21%  Similarity=0.242  Sum_probs=65.6

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++... +++.+|+|.++...   ....+.+..|+.++..++|+||+++.+++...+..+||||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            5677899999999999999875 47899999997532   2234568899999999999999999999988899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (330)
T cd05601          82 Y   82 (330)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.60  E-value=2e-07  Score=88.57  Aligned_cols=72  Identities=22%  Similarity=0.203  Sum_probs=61.3

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++... .+..+|+|.+...   .......+..|++++..++||||+++.+++...+..+|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~   76 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY   76 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeC
Confidence            46899999999999864 5889999999753   223345678899999999999999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.60  E-value=1.7e-07  Score=86.05  Aligned_cols=77  Identities=29%  Similarity=0.500  Sum_probs=65.0

Q ss_pred             CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+....      ....+.+.+|+.+++.++|+||+++++.+..++..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            356678999999999999986 457899999986432      1234678999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        81 v~e~   84 (268)
T cd06630          81 FVEW   84 (268)
T ss_pred             EEec
Confidence            9997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.60  E-value=1.2e-07  Score=87.14  Aligned_cols=78  Identities=26%  Similarity=0.543  Sum_probs=65.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-C---cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-G---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .+|...+.||+|+||.||++.... +   ..+++|.++.. .....+.+..|++++.+++|+||+++.+++...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            356678999999999999999753 3   36999998654 334456799999999999999999999999988999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        85 ~e~   87 (268)
T cd05063          85 TEY   87 (268)
T ss_pred             EEc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.60  E-value=1.8e-07  Score=86.66  Aligned_cols=77  Identities=26%  Similarity=0.458  Sum_probs=65.5

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..++||+|.||.||++... +++.||+|++....  ....+.+.+|+.++..++|+||+++++.+..+...++||||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            4667789999999999999986 47899999986432  22335688999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.60  E-value=2.1e-07  Score=87.13  Aligned_cols=78  Identities=26%  Similarity=0.441  Sum_probs=67.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+|...+.||+|.||.||++... ++..+++|.+........+.+.+|+.++..++|+||+++++.+..+...++||||
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            45677789999999999999864 5789999999765545556789999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.60  E-value=1.8e-07  Score=86.99  Aligned_cols=76  Identities=28%  Similarity=0.357  Sum_probs=63.5

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|+||.||++... +++.+|+|.+....   ......+.+|+.+|..++|+|++++.+.+..++..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            445678999999999999875 47899999986542   22234578899999999999999999999889999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.60  E-value=1.3e-07  Score=86.58  Aligned_cols=78  Identities=28%  Similarity=0.440  Sum_probs=65.9

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+.+...++||+|+||.||++...++..+++|.+.... .....|.+|+.+++.++|+||+++.+.+.. ...+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            345677889999999999999998777889999886543 334579999999999999999999999876 678899987

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.59  E-value=1.6e-07  Score=89.52  Aligned_cols=77  Identities=19%  Similarity=0.258  Sum_probs=64.8

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++..+. ++.+|+|.+.+.   .......+..|+.++..++|+||+++.+.+...+..+||||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            56778999999999999999865 678999998643   12223458889999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 y   82 (332)
T cd05623          82 Y   82 (332)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.59  E-value=7.7e-08  Score=88.96  Aligned_cols=76  Identities=24%  Similarity=0.473  Sum_probs=64.6

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..+.||+|.||.||+|... .+..||+|.+.... ....+.+.+|+.++.+++|+||+++++++...+..++|+||
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            445678999999999999875 47789999987542 33456799999999999999999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.59  E-value=1.2e-07  Score=87.58  Aligned_cols=78  Identities=32%  Similarity=0.548  Sum_probs=65.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ++|.....||+|+||.||++..+.      ...+++|.+...... ....+.+|++++.+++|+||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            457778899999999999998642      357999988665433 4567999999999999999999999998888899


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        85 lv~e~   89 (275)
T cd05046          85 MILEY   89 (275)
T ss_pred             EEEEe
Confidence            99997

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.59  E-value=2.1e-07  Score=88.41  Aligned_cols=73  Identities=18%  Similarity=0.265  Sum_probs=61.6

Q ss_pred             cCccccc--CceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          327 DNKLGQG--GFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G--~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++||+|  +|+.||++..+ +|+.||+|.+...  .....+.+.+|+.+++.++||||+++++++..++..++|+||
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            5789999  78999999874 5889999999654  223345677899999999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.59  E-value=1e-07  Score=87.43  Aligned_cols=76  Identities=33%  Similarity=0.559  Sum_probs=65.7

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|...++||+|+||.||++...+ ++.|++|.+.... ....++.+|+.++..++|+||+++++++...+..+++|||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            46667899999999999999754 7889999987543 3356799999999999999999999999988899999996

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.59  E-value=1.3e-07  Score=88.48  Aligned_cols=79  Identities=27%  Similarity=0.455  Sum_probs=65.3

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-----------------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-----------------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVR  382 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-----------------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~  382 (399)
                      .++|+..++||+|+||.||++...                 +...+|+|.+... ......+|.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            345778899999999999987532                 1346899998754 3344568999999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeC
Q 044262          383 LLGFSFEGTERLLIYEF  399 (399)
Q Consensus       383 l~g~~~~~~~~~lv~Ey  399 (399)
                      +++++...+..+++|||
T Consensus        84 ~~~~~~~~~~~~lv~e~  100 (296)
T cd05095          84 LLAVCITSDPLCMITEY  100 (296)
T ss_pred             EEEEEecCCccEEEEEe
Confidence            99999998999999996

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.59  E-value=2.9e-08  Score=91.41  Aligned_cols=72  Identities=32%  Similarity=0.579  Sum_probs=55.8

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----EEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-----RLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----~~lv~  397 (399)
                      +...+++|.|+||.||+|.+.. ++.||||+......    ---+|+++|+++.|||||+|+-++....+     +.|||
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            4556899999999999999854 68999998755432    23478999999999999999988765322     34566


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       102 ey  103 (364)
T KOG0658|consen  102 EY  103 (364)
T ss_pred             Hh
Confidence            65

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.59  E-value=1.5e-07  Score=86.00  Aligned_cols=76  Identities=26%  Similarity=0.488  Sum_probs=65.0

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||+|.||.||++..+.+..+++|.+..... ....|.+|+.++..++|+||+++.+++...+..++|+||
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            3566789999999999999987777899999865432 344788999999999999999999999888889999996

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.59  E-value=1.4e-07  Score=86.49  Aligned_cols=77  Identities=25%  Similarity=0.474  Sum_probs=65.8

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++... ++..++||.+...   ......++.+|+.++..++|+||+++++++..++..+++||
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            4667789999999999999964 6889999988653   22334578999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        83 ~   83 (267)
T cd08229          83 L   83 (267)
T ss_pred             e
Confidence            6

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.59  E-value=1.3e-07  Score=89.29  Aligned_cols=77  Identities=31%  Similarity=0.546  Sum_probs=61.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .+|+..+.||+|+||.||+|.+.. +.    .||+|.++.. .....+++.+|+.++..++|+||++++|++... ...+
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            347778999999999999998643 33    4899998654 334456799999999999999999999998764 4567


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ++||
T Consensus        86 v~e~   89 (316)
T cd05108          86 ITQL   89 (316)
T ss_pred             eeec
Confidence            7775

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.59  E-value=2e-07  Score=86.87  Aligned_cols=77  Identities=30%  Similarity=0.404  Sum_probs=66.0

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|++++..++||||+++++.+..++..++|||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            4667789999999999999875 47899999986532   2334578999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (290)
T cd05580          82 Y   82 (290)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.58  E-value=2e-07  Score=88.13  Aligned_cols=76  Identities=28%  Similarity=0.475  Sum_probs=64.9

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|+||.||++... ++..+++|.+...   .......+.+|+.++++++|+|++++++++...+..+|||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            556788999999999999875 4789999998643   223345789999999999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.58  E-value=1.7e-07  Score=87.44  Aligned_cols=78  Identities=27%  Similarity=0.485  Sum_probs=66.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...+.||+|.+|.||++... +++.+++|.+....  ......+.+|+.++..++|+||+++++++...+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            35677889999999999999975 57899999986532  2233568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (294)
T PLN00009         82 Y   82 (294)
T ss_pred             c
Confidence            7

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.58  E-value=1.8e-07  Score=85.10  Aligned_cols=76  Identities=26%  Similarity=0.470  Sum_probs=67.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|.||.||++.... +..+++|.+.....  .+++.+|++++++++|+||+++.+.+......++++||
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            567778999999999999999865 78899999865432  56899999999999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.58  E-value=2.5e-07  Score=85.37  Aligned_cols=77  Identities=21%  Similarity=0.393  Sum_probs=65.9

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||.|+||.||++... +++.+++|.+.... ......+.+|+.++++++|+||+++.+.+..+...++|+||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            4566789999999999999975 47899999986542 33445789999999999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=3.4e-08  Score=95.59  Aligned_cols=80  Identities=31%  Similarity=0.510  Sum_probs=69.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +...|...++||+|.-|.||.+.- ..+..||||++........+-.++|+.+|+..+|+|||+++..+...+++|+|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            345567778999999999999874 4578899999977655555568999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       351 y  351 (550)
T KOG0578|consen  351 Y  351 (550)
T ss_pred             e
Confidence            8

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.58  E-value=1.7e-07  Score=88.98  Aligned_cols=75  Identities=23%  Similarity=0.267  Sum_probs=59.9

Q ss_pred             cccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHH---hcCCCCCccceeEEEEeCCeEEEEE
Q 044262          325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLV---ARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ...+.||+|+||.||++... .++.||||.++...   ....+.+.+|+.++   ..++||||+++++++...+..+|||
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~   81 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM   81 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence            45688999999999999875 47899999997531   22234566666554   5678999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 E~   83 (324)
T cd05589          82 EY   83 (324)
T ss_pred             cC
Confidence            97

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.58  E-value=2.4e-07  Score=88.19  Aligned_cols=72  Identities=19%  Similarity=0.212  Sum_probs=60.7

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... .+..||+|.++..   .......+..|..++..+ +||||+++++++...+..+|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~   77 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEF   77 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeC
Confidence            46899999999999875 4789999999753   223345688899999888 799999999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.58  E-value=2e-07  Score=86.36  Aligned_cols=77  Identities=22%  Similarity=0.330  Sum_probs=62.6

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||+|+||.||++... +|+.||+|.++... .....++..|+.. ++.++|+||+++++++...+..+++|||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            5677789999999999999875 48899999987642 2333456667665 6667999999999999988999999987

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.58  E-value=1.8e-07  Score=86.73  Aligned_cols=77  Identities=35%  Similarity=0.618  Sum_probs=64.7

Q ss_pred             CCcccCcccccCceEEEEEEEcC-C-----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-G-----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g-----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .|...+.||+|+||.||+|.... +     ..|++|.+... .......|.+|+.++.+++||||+++++++......++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            46677999999999999998643 2     47999998754 33345579999999999999999999999988888999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      +|||
T Consensus        86 ~~e~   89 (283)
T cd05048          86 LFEY   89 (283)
T ss_pred             EEec
Confidence            9997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.57  E-value=1.7e-07  Score=87.59  Aligned_cols=76  Identities=28%  Similarity=0.495  Sum_probs=64.5

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh-----hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ-----GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      |...++||+|+||.||+|... +++.|++|.+......     ....+..|++++..++|+||+++++++...+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            556688999999999999975 4889999999754322     2345788999999999999999999999988999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (298)
T cd07841          82 EF   83 (298)
T ss_pred             cc
Confidence            97

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.57  E-value=1.7e-07  Score=88.11  Aligned_cols=79  Identities=32%  Similarity=0.458  Sum_probs=65.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  392 (399)
                      .++|...++||+|+||.||++...      .+..||+|.++... ....+.+.+|+.++.++ +|+||+++++.+...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            356778899999999999999741      24579999987542 33445799999999999 79999999999998899


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|++||
T Consensus       114 ~~lv~e~  120 (302)
T cd05055         114 ILVITEY  120 (302)
T ss_pred             eEEEEEc
Confidence            9999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.57  E-value=2.1e-07  Score=86.78  Aligned_cols=79  Identities=30%  Similarity=0.410  Sum_probs=65.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-----------------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-----------------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVR  382 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-----------------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~  382 (399)
                      ...|...++||+|+||.||++....                 +..||+|.+... .....+++.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3457778999999999999987642                 245899998765 3344568999999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeC
Q 044262          383 LLGFSFEGTERLLIYEF  399 (399)
Q Consensus       383 l~g~~~~~~~~~lv~Ey  399 (399)
                      +++++...+..++++||
T Consensus        84 ~~~~~~~~~~~~lv~e~  100 (296)
T cd05051          84 LLGVCTVDPPLCMIMEY  100 (296)
T ss_pred             EEEEEecCCCcEEEEec
Confidence            99999988889999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.57  E-value=1.9e-07  Score=85.10  Aligned_cols=76  Identities=28%  Similarity=0.548  Sum_probs=65.5

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|...+.||+|+||.||++...++..+++|.+..... ...+|.+|++++..++|||++++++.+......++|+||
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF   80 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence            4566789999999999999987788899999865432 345799999999999999999999999888889999997

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.57  E-value=2.3e-07  Score=85.34  Aligned_cols=76  Identities=30%  Similarity=0.570  Sum_probs=61.4

Q ss_pred             CcccCcccccCceEEEEEEEcC----CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-----  392 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----  392 (399)
                      |...++||+|+||.||+|....    +..||+|.++..  .......+.+|+..+..++|+||+++++.+...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            3457899999999999998743    367999998753  33345679999999999999999999999876554     


Q ss_pred             -EEEEEeC
Q 044262          393 -RLLIYEF  399 (399)
Q Consensus       393 -~~lv~Ey  399 (399)
                       .++++||
T Consensus        81 ~~~~v~e~   88 (273)
T cd05035          81 KPMVILPF   88 (273)
T ss_pred             ccEEEEec
Confidence             6888886

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.57  E-value=3e-07  Score=84.12  Aligned_cols=78  Identities=28%  Similarity=0.448  Sum_probs=66.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++|...+.||+|+||.||++... .+..+++|.+....     ......+.+|+.++.+++||||+++++++...+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46778899999999999999864 47899999986432     1223568899999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        82 v~e~   85 (263)
T cd06625          82 FMEY   85 (263)
T ss_pred             EEEE
Confidence            9996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.57  E-value=2.6e-07  Score=84.48  Aligned_cols=76  Identities=28%  Similarity=0.474  Sum_probs=66.3

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... ++..+++|.++....  ...+.+.+|+.+++.++|+||+++++.+...+..++|+||
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            556789999999999999875 578999999876543  3566899999999999999999999999889999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.57  E-value=1.9e-07  Score=87.32  Aligned_cols=78  Identities=28%  Similarity=0.460  Sum_probs=67.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+|...+.||+|+||.||++... ++..+++|.+........+.+.+|+.++.+++|||++++.+.+...+..++|+||
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            45677789999999999999864 5788999998655444456789999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.57  E-value=2.3e-07  Score=84.25  Aligned_cols=72  Identities=31%  Similarity=0.548  Sum_probs=63.3

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++...+++.|++|.+..... .....+.+|+.++.+++|+||+++++++......++|+||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   73 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMEL   73 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEc
Confidence            46899999999999987789999999876433 3456899999999999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.57  E-value=1.3e-07  Score=86.71  Aligned_cols=77  Identities=26%  Similarity=0.459  Sum_probs=63.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.|...++||+|+||.||++...+...||+|.+.... ...+.|.+|+.++..++|+||+++.+... .+..++||||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            34577789999999999999988766789999987532 23457999999999999999999999864 4567899987

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.56  E-value=1.9e-07  Score=85.94  Aligned_cols=76  Identities=24%  Similarity=0.416  Sum_probs=62.7

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh----------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV----------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~----------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      |...+.||+|+||.||+|... +++.+|+|.++....          ...+.+.+|+.++..++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            455789999999999999864 588999998853211          112467889999999999999999999998899


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++|+||
T Consensus        83 ~~lv~e~   89 (272)
T cd06629          83 LSIFLEY   89 (272)
T ss_pred             eEEEEec
Confidence            9999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1.8e-07  Score=89.96  Aligned_cols=79  Identities=25%  Similarity=0.482  Sum_probs=65.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC----Ch-hhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN----SV-QGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~  393 (399)
                      ...+...+.||+|.||.|+.|... .++.||+|.+...    .. ...+...+|+.+|+.++ ||||+++..+.......
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            456777899999999999999764 4799999977653    11 22345668999999999 99999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus        96 ~ivmEy  101 (370)
T KOG0583|consen   96 YIVMEY  101 (370)
T ss_pred             EEEEEe
Confidence            999998

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.56  E-value=1.5e-07  Score=86.15  Aligned_cols=76  Identities=26%  Similarity=0.473  Sum_probs=63.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++..+++..+++|.+..... ..+.|.+|+.++.+++|+|++++++++. .+..+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY   81 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence            45667789999999999999987788899999865432 3457999999999999999999999874 5567899986

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.56  E-value=1.5e-07  Score=86.96  Aligned_cols=79  Identities=30%  Similarity=0.569  Sum_probs=66.5

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      .++|...+.||+|+||.||++....      +..||+|.+.... ......+.+|+.++..++|+||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            3457778999999999999998743      3579999987553 34456799999999999999999999999988999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus        85 ~~v~e~   90 (277)
T cd05032          85 LVVMEL   90 (277)
T ss_pred             EEEEec
Confidence            999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.56  E-value=2.5e-07  Score=85.15  Aligned_cols=72  Identities=29%  Similarity=0.462  Sum_probs=59.0

Q ss_pred             CcccccCceEEEEEEEcCC---cEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHG---QEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g---~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++...++   ..+++|.+.... ....+.|.+|+.++..++||||+++++.+......+|||||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~   76 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEY   76 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEec
Confidence            3689999999999986443   346677765442 34456899999999999999999999999988899999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.56  E-value=1.5e-07  Score=87.64  Aligned_cols=82  Identities=22%  Similarity=0.421  Sum_probs=67.4

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ....++|...+.||+|+||.||++....      ...+|+|.+... .......+.+|+.++.++ +|+||+++++++..
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   87 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ   87 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence            3445567778999999999999998642      357999998754 333445789999999999 89999999999998


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      ....+++|||
T Consensus        88 ~~~~~li~e~   97 (293)
T cd05053          88 EGPLYVVVEY   97 (293)
T ss_pred             CCCeEEEEEe
Confidence            8899999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.56  E-value=2.8e-07  Score=85.72  Aligned_cols=76  Identities=28%  Similarity=0.364  Sum_probs=63.6

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..++||+|+||.||++... .++.+|+|.+....   ......+.+|+.++..++|+|++++.+.+...+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            455688999999999999875 47899999986532   22234578899999999999999999999989999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.56  E-value=2.3e-07  Score=86.85  Aligned_cols=78  Identities=27%  Similarity=0.491  Sum_probs=67.8

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+|...+.||.|.||.||++.. .+++.|++|.+........+.+.+|+.+++.++|+||+++++.+...+..++|+||
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            4577788999999999999985 45889999998765444556789999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.56  E-value=2.4e-07  Score=87.21  Aligned_cols=76  Identities=25%  Similarity=0.526  Sum_probs=64.2

Q ss_pred             CcccCcccccCceEEEEEEEcC---CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  395 (399)
                      |...++||+|+||.||++....   +..+|+|.+....   ......+.+|+.++.+++||||+++.+++...  +..+|
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            4566889999999999999754   6899999997632   33345688999999999999999999999887  77999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        82 v~e~   85 (316)
T cd07842          82 LFDY   85 (316)
T ss_pred             EEeC
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.56  E-value=3.8e-07  Score=83.12  Aligned_cols=76  Identities=20%  Similarity=0.314  Sum_probs=64.9

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|+||.||++... .+..+++|.++.. .....+.+.+|+.++..++|+||+++++.+...+..++++||
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            456789999999999999875 4788999998643 333456788999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.56  E-value=2.4e-07  Score=85.94  Aligned_cols=70  Identities=29%  Similarity=0.383  Sum_probs=59.3

Q ss_pred             ccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++... +++.+|+|.+.....   ...+.+..|+.++..++|+||+++.+++......+|||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeC
Confidence            699999999999875 578999999865322   2235678899999999999999999999888899999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.55  E-value=2.3e-07  Score=85.41  Aligned_cols=80  Identities=31%  Similarity=0.529  Sum_probs=65.2

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC------
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG------  390 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~------  390 (399)
                      .+.+.|...+.||+|+||.||+|.... ++.+|+|.+.... .....+.+|+.++.++ +|+||+++++.+...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            455667778999999999999998754 7889999986543 3345788999999998 799999999998753      


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..+++|||
T Consensus        82 ~~~~iv~e~   90 (272)
T cd06637          82 DQLWLVMEF   90 (272)
T ss_pred             cEEEEEEEc
Confidence            457899997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.55  E-value=1.5e-07  Score=85.71  Aligned_cols=76  Identities=24%  Similarity=0.503  Sum_probs=64.9

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++..+. +..+++|.+...  .....+.+.+|+.+++.++|+||+++++.+...+..++|+||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            5667899999999999999864 788999998653  223345788999999999999999999999989999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.55  E-value=2.9e-07  Score=83.87  Aligned_cols=76  Identities=20%  Similarity=0.387  Sum_probs=65.3

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..++||+|.||.+|++... +++.+++|.+...  .....+++.+|+.++++++|+||+++.+++...+..+||+||
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            556789999999999999864 4789999998643  334456799999999999999999999999989999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.55  E-value=1.9e-07  Score=87.41  Aligned_cols=80  Identities=25%  Similarity=0.493  Sum_probs=65.6

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----  391 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----  391 (399)
                      ..++|+..++||+|.||.||+|..+. ++.|++|.++...  ......+.+|++++..++||||+++++++...+     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            34567788999999999999999864 7899999996542  223346788999999999999999999887654     


Q ss_pred             -----eEEEEEeC
Q 044262          392 -----ERLLIYEF  399 (399)
Q Consensus       392 -----~~~lv~Ey  399 (399)
                           ..+||+||
T Consensus        85 ~~~~~~~~lv~e~   97 (302)
T cd07864          85 KKDKGAFYLVFEY   97 (302)
T ss_pred             cccCCcEEEEEcc
Confidence                 68899987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.55  E-value=3.6e-07  Score=83.46  Aligned_cols=77  Identities=22%  Similarity=0.332  Sum_probs=67.8

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...+.||+|++|.||++.... +..+++|.+..... .....+.+|+..+.+++|+||+++.+.+...+..++|+||
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            56777999999999999999865 88999999876543 4456899999999999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.55  E-value=2.4e-07  Score=90.41  Aligned_cols=72  Identities=15%  Similarity=0.135  Sum_probs=62.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..|...++||+|+||.||++... .++.||+|...      ...+.+|+.++.+++|||||++++++......++|+||
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            45788899999999999999864 47889999753      23578999999999999999999999888889999986

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.55  E-value=3.6e-07  Score=86.97  Aligned_cols=72  Identities=19%  Similarity=0.231  Sum_probs=60.0

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++.... ++.+|+|.+++.   .......+.+|+.++.++ +||||+++++++...+..+|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   77 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY   77 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence            468999999999999754 788999999753   223345678898888776 899999999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.55  E-value=3.4e-07  Score=83.97  Aligned_cols=76  Identities=32%  Similarity=0.512  Sum_probs=63.2

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh---------hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ---------GELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~---------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      |.....||+|+||.||+|... ++..+++|.+......         ..+.+.+|+.++.+++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            455689999999999999874 4788999988653211         124688999999999999999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        82 ~lv~e~   87 (267)
T cd06628          82 NIFLEY   87 (267)
T ss_pred             EEEEEe
Confidence            999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.55  E-value=2.7e-07  Score=92.45  Aligned_cols=76  Identities=16%  Similarity=0.184  Sum_probs=65.3

Q ss_pred             CcccCcccccCceEEEEEEEc-C-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-H-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... + +..|++|.+..........+.+|+.++..++|||||++++++...+..+|||||
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            667789999999999999753 3 567889987655555556788999999999999999999999999999999998

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.54  E-value=1.7e-07  Score=87.21  Aligned_cols=78  Identities=29%  Similarity=0.500  Sum_probs=63.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--ERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~E  398 (399)
                      .++...+.||+|.||.||.+...+ |...|||.....+....+.+.+|+.+|.+++|||||+..|......  ...|.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            345667999999999999999865 8899999987653222567899999999999999999999844433  6889999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        97 y   97 (313)
T KOG0198|consen   97 Y   97 (313)
T ss_pred             c
Confidence            8

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.54  E-value=3.2e-07  Score=85.00  Aligned_cols=76  Identities=22%  Similarity=0.380  Sum_probs=65.7

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|.||.||++... ++..|++|.+....  ......+.+|+.++..++|+||+++++++..+...++|+||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            556788999999999999975 58899999987543  33356799999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.54  E-value=3.7e-07  Score=83.20  Aligned_cols=76  Identities=21%  Similarity=0.340  Sum_probs=65.1

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..++||+|.||.||.+... ++..+++|.+...  +......+.+|+.++++++|+||+++++++...+..+++|||
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            566789999999999888754 4788999987643  344556799999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.54  E-value=2.7e-07  Score=88.88  Aligned_cols=79  Identities=23%  Similarity=0.354  Sum_probs=64.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  391 (399)
                      .++|...+.||+|+||.||++... .+..||+|.+...  .......+.+|+.++..++||||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            356788899999999999999864 4789999998653  2334557889999999999999999999886432      


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++||||
T Consensus       100 ~~~lv~e~  107 (359)
T cd07876         100 DVYLVMEL  107 (359)
T ss_pred             eeEEEEeC
Confidence            47899997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.54  E-value=2.1e-07  Score=86.34  Aligned_cols=76  Identities=36%  Similarity=0.552  Sum_probs=63.1

Q ss_pred             CcccCcccccCceEEEEEEEcC------CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      |...++||+|+||.||+|...+      +..||+|.+..... .....|..|+.++..++||||+++++++...+..+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            4556889999999999998632      46799999975432 3345688999999999999999999999888889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        87 ~e~   89 (283)
T cd05091          87 FSY   89 (283)
T ss_pred             EEc
Confidence            986

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.53  E-value=3.6e-07  Score=85.86  Aligned_cols=77  Identities=19%  Similarity=0.251  Sum_probs=65.7

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|.||.||++.... ++.|++|.+....   ......+.+|+.++..++|+||+++++.+..++..+||||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            56677999999999999998754 6889999987543   2234578899999999999999999999998899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (305)
T cd05609          82 Y   82 (305)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.53  E-value=3.3e-07  Score=86.86  Aligned_cols=72  Identities=24%  Similarity=0.254  Sum_probs=59.9

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++.... ++.||+|.++..   .....+.+..|.+++..+ +||||+++++++...+..+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~   77 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEY   77 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeC
Confidence            468999999999998754 789999998653   223345678898888865 899999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.53  E-value=1.8e-07  Score=86.74  Aligned_cols=77  Identities=23%  Similarity=0.402  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..++||+|.||.||++..++ ++.|++|.++..  .....+.+.+|++++..++|+||+++++++..++..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            46677899999999999998764 789999998653  223346789999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.53  E-value=2.4e-07  Score=87.08  Aligned_cols=78  Identities=29%  Similarity=0.549  Sum_probs=64.2

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc--EEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ--EIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...+.||+|+||.||++.... +.  .+++|.++.. .......+.+|++++.++ +|+||+++.+++...+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            356777999999999999998743 43  4688877654 334456789999999999 899999999999888889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        87 ~e~   89 (303)
T cd05088          87 IEY   89 (303)
T ss_pred             EEe
Confidence            997

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.53  E-value=3.3e-07  Score=84.77  Aligned_cols=77  Identities=30%  Similarity=0.524  Sum_probs=64.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERL  394 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  394 (399)
                      .|...+.||+|+||.||++.+.     .+..+|||.+...... ..+.|.+|+.++..++|+||+++.+++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4556689999999999999864     2578999999765432 45689999999999999999999999876  55789


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      ++|||
T Consensus        85 lv~e~   89 (284)
T cd05038          85 LIMEY   89 (284)
T ss_pred             EEEec
Confidence            99997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.53  E-value=2.7e-07  Score=86.80  Aligned_cols=79  Identities=23%  Similarity=0.397  Sum_probs=65.5

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG  390 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  390 (399)
                      .+.|...+.||+|+||.||++...+        ...+|+|.++.. ......++..|+.++..+ +|+||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            4567888999999999999987521        246999998754 234455788999999999 799999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..++||||
T Consensus        97 ~~~~lv~e~  105 (307)
T cd05098          97 GPLYVIVEY  105 (307)
T ss_pred             CceEEEEec
Confidence            999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.52  E-value=3.7e-07  Score=86.48  Aligned_cols=72  Identities=25%  Similarity=0.324  Sum_probs=58.2

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... +++.+|+|.+.+..   ......+..|.. ++..++||||+++++.+...+..+|||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   77 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDY   77 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcC
Confidence            46999999999999975 47899999986532   122345666664 57889999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.52  E-value=3.5e-07  Score=84.68  Aligned_cols=70  Identities=27%  Similarity=0.336  Sum_probs=58.5

Q ss_pred             ccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++..+. |+.+|+|.+....   ......+..|++++.+++||||+++.+.+..+...++||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSL   74 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEec
Confidence            6999999999998754 8899999986431   12233567799999999999999999999888999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.52  E-value=2.2e-07  Score=86.23  Aligned_cols=85  Identities=26%  Similarity=0.491  Sum_probs=68.6

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe--
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE--  389 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~--  389 (399)
                      ++.+..+.++|...+.||+|+||.||++... .++.+++|.+.... .....+.+|+.++.++ +|+||+++++++..  
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            4556677888999999999999999999875 47889999886532 2234688899999998 69999999998742  


Q ss_pred             ---CCeEEEEEeC
Q 044262          390 ---GTERLLIYEF  399 (399)
Q Consensus       390 ---~~~~~lv~Ey  399 (399)
                         ++..++||||
T Consensus        89 ~~~~~~~~lv~e~  101 (286)
T cd06638          89 VKNGDQLWLVLEL  101 (286)
T ss_pred             cCCCCeEEEEEee
Confidence               3568999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.52  E-value=4.6e-07  Score=84.69  Aligned_cols=73  Identities=29%  Similarity=0.419  Sum_probs=64.2

Q ss_pred             cCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+||+|+||.||++... ++..|++|.+..........+.+|+.++..++|+||+++++.+..++..++||||
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   98 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF   98 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence            367999999999999875 5889999998655555566799999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.52  E-value=4.7e-07  Score=86.56  Aligned_cols=78  Identities=17%  Similarity=0.155  Sum_probs=60.0

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc--CCcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS--HGQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~--~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      ...+.|...++||+|+||.||++...  +++.+|||++...     .....+.|.+|+++|.+++|+|++..+..   .+
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence            34466888999999999999999875  4677899987533     12234569999999999999999964322   24


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus        92 ~~~LVmE~   99 (365)
T PRK09188         92 KDGLVRGW   99 (365)
T ss_pred             CcEEEEEc
Confidence            57999997

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.51  E-value=3.9e-07  Score=82.88  Aligned_cols=75  Identities=37%  Similarity=0.641  Sum_probs=64.4

Q ss_pred             cccCcccccCceEEEEEEEcC-----CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ...+.||+|+||.||++...+     +..||+|.+...... ..+.+..|+.++..++|+||+++++.+...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456889999999999999854     378999999765332 56689999999999999999999999998889999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (258)
T smart00219       82 Y   82 (258)
T ss_pred             c
Confidence            6

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.51  E-value=2.8e-07  Score=85.95  Aligned_cols=77  Identities=26%  Similarity=0.550  Sum_probs=65.8

Q ss_pred             CCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      +|...+.||+|+||.||++...      ++..+++|.+........+.+.+|+.++.+++|+||+++.+++...+..++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV   85 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence            4666789999999999999752      2456899998766655567899999999999999999999999998999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        86 ~e~   88 (291)
T cd05094          86 FEY   88 (291)
T ss_pred             Eec
Confidence            997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.51  E-value=2.2e-07  Score=87.04  Aligned_cols=74  Identities=30%  Similarity=0.422  Sum_probs=64.2

Q ss_pred             ccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          326 TDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       326 ~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ....||+|+||.||++... ++..|++|.+........+.+.+|+.++..++||||+++++.+..++..++|+||
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence            3457999999999999875 5789999999765444556789999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.51  E-value=1.6e-07  Score=85.81  Aligned_cols=77  Identities=22%  Similarity=0.259  Sum_probs=65.9

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++... .+..+++|.+....   ....+.+.+|++++.+++||||+++.+.+..++..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            3566789999999999999975 47899999986532   2345679999999999999999999999988899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        81 ~   81 (258)
T cd05578          81 L   81 (258)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.51  E-value=3.3e-07  Score=83.89  Aligned_cols=77  Identities=18%  Similarity=0.242  Sum_probs=66.4

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..+.||+|+||.||++... +++.+++|.+.... .....++.+|++++.+++|+||+++++.+...+..+|++||
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            4556789999999999999986 47889999987653 34456799999999999999999999999999999999996

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.51  E-value=4.4e-07  Score=84.43  Aligned_cols=77  Identities=19%  Similarity=0.292  Sum_probs=63.8

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E  398 (399)
                      +|...++||.|.+|.||++... .++.+|+|.+... .......+.+|++++..++|+||+++++++...  +..+||||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            4666789999999999999985 4788999998754 223456799999999999999999999988653  46899999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (287)
T cd06621          82 Y   82 (287)
T ss_pred             e
Confidence            7

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.51  E-value=3.8e-07  Score=86.36  Aligned_cols=72  Identities=25%  Similarity=0.274  Sum_probs=60.1

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++.... +..+|+|.+++.   .......+..|.+++..+ +||||+++++++...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~   77 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEY   77 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            468999999999998864 778999999753   223345678888888877 799999999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.51  E-value=5.9e-07  Score=82.19  Aligned_cols=77  Identities=21%  Similarity=0.349  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|+..+.||.|+||.||++... ++..+++|.+.... ......+.+|++.++.++|+||+++.+.+..++..++|+||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            5677899999999999999965 47789999986542 23456799999999999999999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.51  E-value=3.3e-07  Score=83.58  Aligned_cols=71  Identities=34%  Similarity=0.581  Sum_probs=60.7

Q ss_pred             CcccccCceEEEEEEEcC--C--cEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH--G--QEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~--g--~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|++|.||++.+..  +  ..||+|.+..... ...+.+.+|+.++.+++|+||+++++.+.. ...++|+||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~   76 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL   76 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence            468999999999998743  2  3689999977654 556789999999999999999999999887 888999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.51  E-value=4.4e-07  Score=84.28  Aligned_cols=80  Identities=26%  Similarity=0.461  Sum_probs=69.6

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ..++.|...+.||+|.||.||++..+ .+..+++|.+..... ....+.+|++++..++|+|++++++.+...+..++++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            45566777899999999999999986 478899999976543 4567899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        95 e~   96 (286)
T cd06614          95 EY   96 (286)
T ss_pred             ec
Confidence            97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.51  E-value=2.7e-07  Score=84.09  Aligned_cols=70  Identities=31%  Similarity=0.602  Sum_probs=58.0

Q ss_pred             CcccccCceEEEEEEEcCCc-----------EEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          328 NKLGQGGFGAVYKGRLSHGQ-----------EIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~-----------~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++||+|+||.||+|...+..           .+++|.+...... ...|.+|+.++++++|+||++++|++.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46899999999999985432           4788877654333 5689999999999999999999999887 778999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        79 ~e~   81 (259)
T cd05037          79 EEY   81 (259)
T ss_pred             EEc
Confidence            997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.51  E-value=1.9e-07  Score=87.23  Aligned_cols=76  Identities=26%  Similarity=0.410  Sum_probs=65.6

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.....||+|+||.||++... ++..||+|.+........+.+.+|+..+..++|+||+++++.+..++..++||||
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~  100 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF  100 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence            344577999999999999874 4789999998765555566799999999999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.51  E-value=4.2e-07  Score=83.06  Aligned_cols=70  Identities=29%  Similarity=0.471  Sum_probs=57.8

Q ss_pred             cccccCceEEEEEEEc---CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          329 KLGQGGFGAVYKGRLS---HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       329 ~iG~G~fG~Vykg~~~---~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +||+|+||.||+|.++   ++..+|+|.++..  .....+++.+|+.++..++|+||++++|++. .+..++||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEec
Confidence            6899999999999763   4678999998644  2334567999999999999999999999874 5567899987

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.51  E-value=6.1e-08  Score=87.73  Aligned_cols=80  Identities=26%  Similarity=0.409  Sum_probs=68.8

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEE-EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT  391 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  391 (399)
                      ++++-+-+     .++||+|+++.|-..+ +..|.++|||++.+.....+....+|++++... .|+||++|+.++.++.
T Consensus        75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            45555444     4789999999998776 467899999999988777788899999998876 5999999999999999


Q ss_pred             eEEEEEe
Q 044262          392 ERLLIYE  398 (399)
Q Consensus       392 ~~~lv~E  398 (399)
                      ..|||||
T Consensus       150 ~FYLVfE  156 (463)
T KOG0607|consen  150 RFYLVFE  156 (463)
T ss_pred             eEEEEEe
Confidence            9999998

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.51  E-value=3.7e-07  Score=96.54  Aligned_cols=82  Identities=22%  Similarity=0.380  Sum_probs=66.8

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCe
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTE  392 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~  392 (399)
                      ......|.+.++||+|+||.||++.... +..+|+|.+...  .......|..|+.+|..++|||||++++++..  ...
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            3444678888999999999999998754 678999988653  33345679999999999999999999998764  356


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      ++|||||
T Consensus        89 lyIVMEY   95 (1021)
T PTZ00266         89 LYILMEF   95 (1021)
T ss_pred             EEEEEeC
Confidence            8999997

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.51  E-value=5e-07  Score=82.19  Aligned_cols=76  Identities=20%  Similarity=0.370  Sum_probs=65.1

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... .+..+++|.+...  .......+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            566789999999999999874 4788999998654  333456799999999999999999999999888999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.50  E-value=3.1e-07  Score=85.61  Aligned_cols=78  Identities=22%  Similarity=0.437  Sum_probs=64.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  396 (399)
                      ++|...+.||+|.||.||++..+. ++.+++|.++....  .....+.+|+.++.+++||||+++.+++...  +..+||
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            356777999999999999999864 78899999975422  2234578899999999999999999998877  789999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        85 ~e~   87 (293)
T cd07843          85 MEY   87 (293)
T ss_pred             ehh
Confidence            997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.50  E-value=5.3e-07  Score=82.70  Aligned_cols=78  Identities=27%  Similarity=0.414  Sum_probs=62.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  393 (399)
                      .+|...++||+|+||.||++...+ +..|++|.+...     .....+.+.+|+.++.+++|+||+++.+++...  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            357778999999999999998754 789999988532     122345788999999999999999999987653  457


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        82 ~~v~e~   87 (265)
T cd06652          82 SIFMEH   87 (265)
T ss_pred             EEEEEe
Confidence            789986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.50  E-value=3.4e-07  Score=85.66  Aligned_cols=78  Identities=24%  Similarity=0.473  Sum_probs=64.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-C--cEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-G--QEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||++...+ +  ..+++|.++.. .....+.|.+|+.++.++ +||||+++++++...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            457778999999999999998854 3  24788888753 334456799999999999 799999999999888889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        82 ~e~   84 (297)
T cd05089          82 IEY   84 (297)
T ss_pred             EEe
Confidence            997

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.50  E-value=7e-07  Score=84.30  Aligned_cols=76  Identities=28%  Similarity=0.457  Sum_probs=64.1

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|+||.||+|... .+..+++|.+...   .......+.+|+.++..++|+|++++.+++...+..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            444578999999999999874 4788999998643   223345788999999999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.50  E-value=3.4e-07  Score=87.09  Aligned_cols=83  Identities=24%  Similarity=0.374  Sum_probs=67.5

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCe
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTE  392 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~  392 (399)
                      +...+++|...++||+|+||.||++... ++..||+|++...  .....+.+..|+.++..++||||+++.+++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            3445677888999999999999999864 5889999988643  22334578899999999999999999998865 456


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++++||
T Consensus        85 ~~lv~e~   91 (328)
T cd07856          85 IYFVTEL   91 (328)
T ss_pred             EEEEeeh
Confidence            8899986

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.50  E-value=1e-07  Score=87.22  Aligned_cols=72  Identities=28%  Similarity=0.475  Sum_probs=60.5

Q ss_pred             CcccccCceEEEEEEEcC--------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++....        ...+++|.+........+.+..|+.++..++|||++++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            468999999999998642        234888888655545556799999999999999999999999998899999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.50  E-value=4.2e-07  Score=83.12  Aligned_cols=70  Identities=27%  Similarity=0.464  Sum_probs=57.3

Q ss_pred             cccccCceEEEEEEEc---CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          329 KLGQGGFGAVYKGRLS---HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       329 ~iG~G~fG~Vykg~~~---~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .||+|+||.||+|.+.   .+..||+|.+.... ....+.|.+|+.++.+++|+||+++++++. .+..++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEe
Confidence            4899999999999864   34579999987653 333467999999999999999999999874 5578899997

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.50  E-value=5.3e-07  Score=82.88  Aligned_cols=76  Identities=25%  Similarity=0.446  Sum_probs=62.4

Q ss_pred             CcccCcccccCceEEEEEEEcC--CcEEEEEEecCC----------ChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH--GQEIAVKRLSKN----------SVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEG  390 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~--g~~vavK~l~~~----------~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~  390 (399)
                      |+..+.||+|+||.||++....  +..+|+|.+...          ......++.+|+.++.+ ++|+||+++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5667899999999999999865  578999987532          12233567889988875 7999999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..+++|||
T Consensus        82 ~~~~lv~e~   90 (269)
T cd08528          82 DRLYIVMDL   90 (269)
T ss_pred             CeEEEEEec
Confidence            999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.49  E-value=3.6e-07  Score=86.28  Aligned_cols=79  Identities=18%  Similarity=0.299  Sum_probs=67.6

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .+.|+..++||.|.-+.||+|.. +.++.||||++.-... .....+.+|+..|..++||||++....+..+.++|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            35677789999999999999985 4579999999965422 225689999999999999999999999999999999997


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       105 f  105 (516)
T KOG0582|consen  105 F  105 (516)
T ss_pred             h
Confidence            6

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.49  E-value=5.2e-07  Score=85.65  Aligned_cols=72  Identities=25%  Similarity=0.325  Sum_probs=58.2

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... +|+.+|+|.+...   .......+..|.. ++..++||||+++++.+...+..+|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDF   77 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcC
Confidence            46899999999999874 4889999998653   2223345666665 46779999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.49  E-value=5.1e-07  Score=85.39  Aligned_cols=72  Identities=24%  Similarity=0.281  Sum_probs=58.8

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++.... ++.||+|.++...   ......+..|..++.. ++||||+++++++...+..+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey   77 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY   77 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence            468999999999999754 7889999997531   1223456778877775 5999999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.49  E-value=5.3e-07  Score=82.98  Aligned_cols=75  Identities=27%  Similarity=0.551  Sum_probs=59.4

Q ss_pred             cccCcccccCceEEEEEEEcCC-c--EEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeE
Q 044262          325 STDNKLGQGGFGAVYKGRLSHG-Q--EIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TER  393 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~g-~--~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~  393 (399)
                      ...++||+|+||.||+|..... .  .+|+|.++..  +....+.|.+|+.++..++|+||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            4568999999999999998543 2  5899988653  344456799999999999999999999987542      246


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        82 ~~v~e~   87 (272)
T cd05075          82 VVILPF   87 (272)
T ss_pred             EEEEEe
Confidence            788886

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.49  E-value=3.5e-07  Score=83.34  Aligned_cols=75  Identities=35%  Similarity=0.597  Sum_probs=63.5

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhH--HHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGE--LEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~--~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +..+.||+|+||.||++.... ++.+|+|.+........  ....+|+.++.+++|+||++++++.......++||||
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence            346789999999999999865 56899999987754433  2346699999999999999999999999999999986

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.49  E-value=3.8e-07  Score=84.77  Aligned_cols=77  Identities=22%  Similarity=0.348  Sum_probs=63.9

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +|...++||+|+||.||++... .++.+|+|.+.... ......+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            3445678999999999999875 47899999987542 234557899999999996 99999999999888889999986

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.49  E-value=3.7e-07  Score=84.58  Aligned_cols=75  Identities=31%  Similarity=0.524  Sum_probs=64.0

Q ss_pred             cccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +..++||+|.+|.||++... +|..|++|++....  ......+.+|++.+.+++|+|++++++++..++..+++|||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~   79 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF   79 (283)
T ss_pred             chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence            45688999999999999875 58899999986542  22335688999999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.49  E-value=2.2e-07  Score=88.79  Aligned_cols=81  Identities=23%  Similarity=0.377  Sum_probs=63.9

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG  390 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  390 (399)
                      .+.++|...++||+|+||.||++...      .++.||+|.++... ....+.+..|+.++.++ +|+||+++++++...
T Consensus         4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~   83 (337)
T cd05054           4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP   83 (337)
T ss_pred             cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence            34456788899999999999999642      24689999987542 23345688999999999 899999999988654


Q ss_pred             -CeEEEEEeC
Q 044262          391 -TERLLIYEF  399 (399)
Q Consensus       391 -~~~~lv~Ey  399 (399)
                       ...++++||
T Consensus        84 ~~~~~~v~ey   93 (337)
T cd05054          84 GGPLMVIVEY   93 (337)
T ss_pred             CCCEEEEEec
Confidence             567888987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.48  E-value=5.7e-07  Score=85.28  Aligned_cols=72  Identities=24%  Similarity=0.324  Sum_probs=58.0

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... +++.||+|.+....   ......++.|.. ++..++||||+++++.+...+..+|||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~   77 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDY   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcC
Confidence            46899999999999985 48899999986531   122345566655 56789999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.48  E-value=3.7e-07  Score=85.67  Aligned_cols=79  Identities=23%  Similarity=0.423  Sum_probs=65.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG  390 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  390 (399)
                      .++|...+.||+|+||.||++...        ++..|++|.+... ......++.+|+.++..+ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            445677899999999999999741        2347999988654 234456799999999999 899999999999988


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      ...+|+|||
T Consensus        94 ~~~~lv~e~  102 (304)
T cd05101          94 GPLYVIVEY  102 (304)
T ss_pred             CceEEEEec
Confidence            899999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.48  E-value=5.5e-07  Score=93.79  Aligned_cols=78  Identities=23%  Similarity=0.271  Sum_probs=66.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... .++.||+|.++...   ......+..|+.++..++|+||+++++.+...+..+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            45777899999999999999986 47899999986542   233457889999999999999999999998899999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        84 Ey   85 (669)
T cd05610          84 EY   85 (669)
T ss_pred             eC
Confidence            97

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.48  E-value=1.9e-08  Score=90.11  Aligned_cols=75  Identities=23%  Similarity=0.462  Sum_probs=66.1

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      -|...++||+|.||.|||+..+. |..||||.....  .+.++.+.|+.+|.+...+.+|+.+|.+.....+|+||||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            35567899999999999999865 889999988654  3456899999999999999999999999999999999998

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.48  E-value=3.5e-07  Score=86.33  Aligned_cols=80  Identities=25%  Similarity=0.435  Sum_probs=65.2

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ..++|...++||+|+||.||++...        ....+|+|.++.. ......++.+|+.++..+ +|+||+++++++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            3456777899999999999998742        2356899998754 333456789999999999 69999999999988


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      ....++++||
T Consensus        90 ~~~~~lv~e~   99 (314)
T cd05099          90 EGPLYVIVEY   99 (314)
T ss_pred             CCceEEEEec
Confidence            8889999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.48  E-value=4.5e-07  Score=83.90  Aligned_cols=77  Identities=31%  Similarity=0.566  Sum_probs=63.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ..|...+.||+|+||.||+|..+. +.    .+++|.+.... .....++.+|+.++..++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            345667899999999999998743 32    58999886653 3445679999999999999999999999876 77889


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        86 v~e~   89 (279)
T cd05057          86 ITQL   89 (279)
T ss_pred             EEec
Confidence            9986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.48  E-value=5.7e-07  Score=84.85  Aligned_cols=77  Identities=27%  Similarity=0.332  Sum_probs=66.3

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...+.||+|+||.||++.... +..+|+|.+.....   ...+.+..|++++..++|+||+++++.+...+..++|||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            46677899999999999998764 88999999976432   244578999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (316)
T cd05574          82 Y   82 (316)
T ss_pred             e
Confidence            6

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.48  E-value=4.7e-07  Score=83.82  Aligned_cols=75  Identities=25%  Similarity=0.478  Sum_probs=63.9

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey  399 (399)
                      ...++||+|+||.||++...+ +..+++|.+....  ......+.+|++++..++|+|++++++++...  +..++|+||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            456789999999999999764 7899999997652  33345788999999999999999999999877  789999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.48  E-value=6e-07  Score=82.86  Aligned_cols=76  Identities=25%  Similarity=0.534  Sum_probs=64.4

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeEEEEEe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      |+..++||+|+||.||+|... ++..+++|.+... ......++.+|+.+++.++   |+|++++.+++..+...+||||
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            556789999999999999974 5889999998654 3344567889999999886   9999999999998899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        83 ~   83 (277)
T cd06917          83 Y   83 (277)
T ss_pred             c
Confidence            7

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.48  E-value=4.6e-07  Score=85.84  Aligned_cols=72  Identities=28%  Similarity=0.327  Sum_probs=59.7

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++..+. ++.||+|.+.+.   .....+.+..|..++..+ +||||+++++++...+..+|||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey   77 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF   77 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence            468999999999999754 789999998653   223345678888888776 799999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.48  E-value=5.5e-07  Score=85.20  Aligned_cols=72  Identities=24%  Similarity=0.267  Sum_probs=57.5

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++.... ++.||+|.++..   .....+.+..|..++.. .+||||+++++.+..++..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~   77 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEY   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            468999999999999854 778999998753   12233456667776664 5899999999999889999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.47  E-value=9.1e-07  Score=81.26  Aligned_cols=77  Identities=27%  Similarity=0.444  Sum_probs=62.6

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERL  394 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  394 (399)
                      +|...++||+|+||.||++... .+..+++|.+....     .+....+.+|+.++..++|+||+++.+++..  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            5777899999999999999875 47899999886431     2234568899999999999999999998865  35678


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +++||
T Consensus        83 l~~e~   87 (266)
T cd06651          83 IFMEY   87 (266)
T ss_pred             EEEeC
Confidence            89986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.47  E-value=3.4e-07  Score=84.26  Aligned_cols=77  Identities=23%  Similarity=0.449  Sum_probs=62.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcCC----cEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g----~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      +++...++||+|+||.||+|...+.    ..|++|...... ....+.+.+|+.++.+++|+||+++++++.. +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            3466779999999999999986432    468999886553 4455689999999999999999999998754 557899


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        85 ~e~   87 (270)
T cd05056          85 MEL   87 (270)
T ss_pred             EEc
Confidence            986

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.47  E-value=5.2e-07  Score=83.77  Aligned_cols=77  Identities=31%  Similarity=0.459  Sum_probs=63.3

Q ss_pred             CCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERL  394 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  394 (399)
                      .|+..++||+|+||.||.+.+.     .+..|++|.++.. .......+.+|+.+++.++|+||+++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            3566789999999999999752     3678999998754 234456799999999999999999999998764  5688


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        85 lv~e~   89 (284)
T cd05079          85 LIMEF   89 (284)
T ss_pred             EEEEc
Confidence            99997

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.47  E-value=7.8e-07  Score=82.50  Aligned_cols=76  Identities=30%  Similarity=0.430  Sum_probs=61.0

Q ss_pred             CcccCcccccCceEEEEEEE-----cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  395 (399)
                      +...+.||+|+||.||.+.+     .++..||+|.+.... ......|.+|++++.+++||||+++.+++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            35678999999999988654     246789999987542 23456789999999999999999999988653  35789


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      +|||
T Consensus        86 v~e~   89 (283)
T cd05080          86 IMEY   89 (283)
T ss_pred             EecC
Confidence            9987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.46  E-value=6.7e-07  Score=83.19  Aligned_cols=77  Identities=29%  Similarity=0.470  Sum_probs=58.1

Q ss_pred             CCcccCcccccCceEEEEEEEc--CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEEe-----C
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS--HGQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSFE-----G  390 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~--~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~  390 (399)
                      .|...+.||+|+||.||++...  ++..||+|.++...  ......+.+|+.++..+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            4666789999999999999863  36789999986532  22234567777776655   79999999998853     3


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      ...++|+||
T Consensus        82 ~~~~lv~e~   90 (290)
T cd07862          82 TKLTLVFEH   90 (290)
T ss_pred             CcEEEEEcc
Confidence            458899986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.46  E-value=4e-07  Score=86.79  Aligned_cols=78  Identities=22%  Similarity=0.396  Sum_probs=64.1

Q ss_pred             CCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT  391 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  391 (399)
                      ..|...+.||+|+||.||++....        ...||+|.++.. .....+++.+|+.++.++ +|+||+++++++...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            346778999999999999997421        236899988754 334456899999999999 8999999999999888


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++++||
T Consensus        92 ~~~lv~e~   99 (334)
T cd05100          92 PLYVLVEY   99 (334)
T ss_pred             ceEEEEec
Confidence            89999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.46  E-value=5.2e-07  Score=84.09  Aligned_cols=77  Identities=26%  Similarity=0.406  Sum_probs=62.7

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCe-----E
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTE-----R  393 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~-----~  393 (399)
                      +|+..+.||+|+||.||++... +++.||+|.++...  ......+.+|+.++..++ |+||+++++++...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            5677889999999999999975 47899999876542  223357889999999995 6999999999876655     8


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus        82 ~lv~e~   87 (295)
T cd07837          82 YLVFEY   87 (295)
T ss_pred             EEEeec
Confidence            999997

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.46  E-value=1.1e-06  Score=79.78  Aligned_cols=76  Identities=28%  Similarity=0.516  Sum_probs=65.8

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+..++||+|.+|.||++... .+..+++|.+.....  .....+.+|++++.+++|+|++++++++...+..++++||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            556789999999999999875 478899999976543  4456799999999999999999999999988999999986

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.45  E-value=5.9e-07  Score=84.50  Aligned_cols=79  Identities=25%  Similarity=0.477  Sum_probs=64.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  395 (399)
                      .++|...+.||+|.||.||++... .|+.||+|.++....  .....+.+|+.++.+++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            356778899999999999999975 488999999864321  2223567899999999999999999998654  56899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        86 v~e~   89 (309)
T cd07845          86 VMEY   89 (309)
T ss_pred             EEec
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.45  E-value=5.9e-07  Score=86.70  Aligned_cols=79  Identities=19%  Similarity=0.333  Sum_probs=64.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------T  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~  391 (399)
                      .++|...++||+|+||.||++... .++.||||.+...  .......+.+|+.++..++|+||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            456788899999999999999864 4788999998653  233345788999999999999999999987543      3


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++||||
T Consensus       103 ~~~lv~e~  110 (364)
T cd07875         103 DVYIVMEL  110 (364)
T ss_pred             eEEEEEeC
Confidence            47999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.45  E-value=4.9e-07  Score=89.77  Aligned_cols=72  Identities=24%  Similarity=0.267  Sum_probs=61.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..|.....||+|+||.||++.... ++.||||....      ..+.+|+.+|.+++|+|||++++++..+...+|||||
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            357778999999999999999865 78899996422      2467899999999999999999999999999999985

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.45  E-value=6.7e-07  Score=84.42  Aligned_cols=71  Identities=23%  Similarity=0.480  Sum_probs=57.8

Q ss_pred             cCcccccCceEEEEEEEc---CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~---~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey  399 (399)
                      ..+||+|+||.||++...   .+..+|+|.+....  ....+.+|+.+|.+++||||+++++++..  ....++++||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            468999999999999864   35789999986542  23457899999999999999999998854  3557899986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.45  E-value=6.3e-07  Score=88.84  Aligned_cols=76  Identities=22%  Similarity=0.459  Sum_probs=60.2

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--------
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--------  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------  390 (399)
                      ....|...++||+|+||.||+|... .++.||||.+....    ....+|+.+|..++|+|||++.+++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3456888899999999999999875 47899999885432    1345799999999999999998876432        


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      ..+++||||
T Consensus       140 ~~l~lvmE~  148 (440)
T PTZ00036        140 IFLNVVMEF  148 (440)
T ss_pred             eEEEEEEec
Confidence            236789997

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.45  E-value=6.7e-07  Score=84.87  Aligned_cols=76  Identities=21%  Similarity=0.152  Sum_probs=62.0

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeEEEEEe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHR-NLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E  398 (399)
                      |...+.||+|+||.||++...+ ++.||+|.+...   .....+.+..|.+++..++|+ +|+++.+++...+..++|||
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            5667899999999999998754 678999998753   223345688899999998765 58888888888889999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (324)
T cd05587          82 Y   82 (324)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.44  E-value=7.1e-07  Score=84.02  Aligned_cols=76  Identities=29%  Similarity=0.489  Sum_probs=64.3

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||+|... ++..+++|.+...   ......++.+|+.+++.++|+|++++.+++...+..++|+||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            555688999999999999975 4778999998642   223345788999999999999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.44  E-value=7.4e-07  Score=81.12  Aligned_cols=72  Identities=40%  Similarity=0.696  Sum_probs=62.4

Q ss_pred             CcccccCceEEEEEEEcC----CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++....    +..+++|.+...... ..+.+.+|++.+..++|+||+++++++......++|+||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   77 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY   77 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence            478999999999999854    678999999765332 356899999999999999999999999988899999997

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.44  E-value=1e-06  Score=79.88  Aligned_cols=76  Identities=26%  Similarity=0.447  Sum_probs=65.5

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEEe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIYE  398 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E  398 (399)
                      |...+.||+|++|.||++... ++..|++|.+.....  ...+.+.+|+..+++++|+||+++++.+...  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            556789999999999999986 588999999876542  4456799999999999999999999999887  78999998


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (260)
T cd06606          82 Y   82 (260)
T ss_pred             e
Confidence            6

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.44  E-value=7.7e-07  Score=81.95  Aligned_cols=72  Identities=31%  Similarity=0.568  Sum_probs=60.1

Q ss_pred             CcccccCceEEEEEEEcC-Cc--EEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQ--EIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++...+ +.  .+++|.+... .....+.+.+|+.++.++ +||||+++++++...+..+++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~   77 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   77 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEe
Confidence            468999999999999854 33  4788888653 334456799999999999 899999999999988889999996

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.44  E-value=4.8e-07  Score=82.78  Aligned_cols=76  Identities=29%  Similarity=0.460  Sum_probs=62.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.+...++||+|+||.||++....+..+++|.+.... ...+.|.+|+.++..++|+|++++.+++. .+..+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF   81 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence            4466778999999999999998777789999886543 23457899999999999999999998874 5567899987

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.44  E-value=2.5e-07  Score=85.74  Aligned_cols=76  Identities=25%  Similarity=0.479  Sum_probs=64.0

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|.||.||++... .|..+++|.++...  ......+.+|+.++.+++|+||+++++++......++++||
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            556688999999999999975 48899999986532  22234678899999999999999999999988999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.43  E-value=9.1e-07  Score=84.12  Aligned_cols=72  Identities=21%  Similarity=0.213  Sum_probs=60.4

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++.... ++.+|+|.++...   ....+.+.+|+.++.++ +|+||+++.+++...+..+|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   77 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY   77 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence            469999999999998754 6889999997542   23345688999998887 699999999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=7.8e-08  Score=90.46  Aligned_cols=77  Identities=21%  Similarity=0.406  Sum_probs=66.9

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|...+.||+|.||.||||.-.. ++.||+|.+... .....++...|+.++.+++|+||.+.+|.+..+..+|++|||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            45667899999999999999744 788999999754 444567899999999999999999999999999999999987

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.43  E-value=3.1e-07  Score=94.36  Aligned_cols=84  Identities=30%  Similarity=0.406  Sum_probs=70.5

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLG  385 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g  385 (399)
                      .++...+++...+.||+|.||.|++|.+..        ...||||.++.. .....+.+..|+++|..+ +|+||+.|+|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            466667777777899999999999998631        347999999865 334567899999999998 6999999999


Q ss_pred             EEEeCCeEEEEEeC
Q 044262          386 FSFEGTERLLIYEF  399 (399)
Q Consensus       386 ~~~~~~~~~lv~Ey  399 (399)
                      +|....+.++|.||
T Consensus       370 ~~t~~~~~~~v~Ey  383 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEY  383 (609)
T ss_pred             eeccCCceEEEEEe
Confidence            99998999999997

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.43  E-value=6.8e-07  Score=83.56  Aligned_cols=79  Identities=20%  Similarity=0.404  Sum_probs=65.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++|...++||+|.||.||++..+. +..+|||.++... .....++..|+.++.+.+ |+||+++++++......+++|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3556778999999999999999865 8899999997542 233456778888777765 999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        94 e~   95 (296)
T cd06618          94 EL   95 (296)
T ss_pred             ec
Confidence            97

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.43  E-value=3.1e-07  Score=93.27  Aligned_cols=79  Identities=27%  Similarity=0.450  Sum_probs=66.3

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCC-cEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEE-EEe------CC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHG-QEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGF-SFE------GT  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~-~~~------~~  391 (399)
                      .-++.+.++|.+|+|+.||.+....+ ..+|+|++-..++...+...+||.+|++|. |+|||.+++. ...      .-
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            33456679999999999999998765 999999998878888889999999999997 9999999993 222      24


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      +.+|.|||
T Consensus       116 EvllLmEy  123 (738)
T KOG1989|consen  116 EVLLLMEY  123 (738)
T ss_pred             EEEeehhh
Confidence            67899997

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.43  E-value=5.7e-07  Score=86.49  Aligned_cols=80  Identities=20%  Similarity=0.341  Sum_probs=64.4

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------  390 (399)
                      ..++|...+.||+|+||.||++... .++.||||.+...  .......+.+|+.++..++|+||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            3456888899999999999999864 4788999998653  233345788999999999999999999987643      


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      ...++||||
T Consensus        95 ~~~~lv~e~  103 (355)
T cd07874          95 QDVYLVMEL  103 (355)
T ss_pred             ceeEEEhhh
Confidence            346899986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.43  E-value=9.2e-07  Score=81.25  Aligned_cols=80  Identities=29%  Similarity=0.451  Sum_probs=66.6

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC-----
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT-----  391 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~-----  391 (399)
                      .++++|...+.||+|+||.||++..+ .++.+++|.+..... ....+.+|+.++.++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            45677888999999999999999985 467899999876543 345799999999998 7999999999987644     


Q ss_pred             -eEEEEEeC
Q 044262          392 -ERLLIYEF  399 (399)
Q Consensus       392 -~~~lv~Ey  399 (399)
                       ..++||||
T Consensus        82 ~~~~lv~e~   90 (275)
T cd06608          82 DQLWLVMEL   90 (275)
T ss_pred             eEEEEEEEc
Confidence             48999997

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.43  E-value=7.5e-07  Score=82.96  Aligned_cols=86  Identities=27%  Similarity=0.444  Sum_probs=69.7

Q ss_pred             ChhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262          313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG  390 (399)
Q Consensus       313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  390 (399)
                      ...++..+.++|...+.||+|.||.||++... +++.+|+|.+..... ....+.+|+.++.++ +|+|++++++++...
T Consensus        13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            44566677888999999999999999999874 478899999865432 234678899999988 899999999998754


Q ss_pred             -----CeEEEEEeC
Q 044262          391 -----TERLLIYEF  399 (399)
Q Consensus       391 -----~~~~lv~Ey  399 (399)
                           ...++|+||
T Consensus        92 ~~~~~~~~~lv~ey  105 (291)
T cd06639          92 DKLVGGQLWLVLEL  105 (291)
T ss_pred             cccCCCeeEEEEEE
Confidence                 357999997

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.42  E-value=1.3e-06  Score=78.79  Aligned_cols=76  Identities=33%  Similarity=0.611  Sum_probs=66.8

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|++|.||++... ++..+++|++..........+.+|+..+.+++|+|++++++.+......++++||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence            455688999999999999986 5788999999776544567899999999999999999999999988999999997

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.42  E-value=4.4e-07  Score=89.96  Aligned_cols=80  Identities=23%  Similarity=0.290  Sum_probs=67.7

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++|....+||+|.||+|+.++++. ++..|||.|++.   .....+..+.|-.++.-. +||-|++|++++-..+.++
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            34578888999999999999999865 778999999876   344556778888776655 6999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      .||||
T Consensus       446 fvmey  450 (694)
T KOG0694|consen  446 FVMEY  450 (694)
T ss_pred             EEEEe
Confidence            99998

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.42  E-value=7.2e-07  Score=83.67  Aligned_cols=78  Identities=27%  Similarity=0.451  Sum_probs=62.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-------  391 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------  391 (399)
                      ++|...++||+|+||.||++... ++..||+|.+....  ......+.+|+.++.+++||||+++++++....       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            45777899999999999999875 47899999986432  222345678999999999999999999987643       


Q ss_pred             -eEEEEEeC
Q 044262          392 -ERLLIYEF  399 (399)
Q Consensus       392 -~~~lv~Ey  399 (399)
                       ..++||||
T Consensus        92 ~~~~lv~e~  100 (310)
T cd07865          92 GSFYLVFEF  100 (310)
T ss_pred             ceEEEEEcC
Confidence             34899987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.42  E-value=8.5e-07  Score=84.89  Aligned_cols=82  Identities=21%  Similarity=0.357  Sum_probs=65.1

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC---
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT---  391 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---  391 (399)
                      ....++|...+.||+|+||.||++... ++..||||.+...  .......+.+|+.+|.+++|+||+++++++....   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            334567888899999999999999864 5889999998543  2233456889999999999999999999886543   


Q ss_pred             ---eEEEEEeC
Q 044262          392 ---ERLLIYEF  399 (399)
Q Consensus       392 ---~~~lv~Ey  399 (399)
                         ..++|+||
T Consensus        91 ~~~~~~lv~e~  101 (343)
T cd07880          91 RFHDFYLVMPF  101 (343)
T ss_pred             ccceEEEEEec
Confidence               35889886

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.42  E-value=1.2e-06  Score=81.44  Aligned_cols=76  Identities=28%  Similarity=0.411  Sum_probs=65.4

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +...++||+|++|.||++... +++.+++|.+........+.+.+|+.++..++|+||+++++++..++..++++||
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence            444579999999999999864 5788999998765545556789999999999999999999999989999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.42  E-value=9.2e-07  Score=83.88  Aligned_cols=76  Identities=21%  Similarity=0.152  Sum_probs=61.4

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      |...++||+|+||.||++.... +..+|+|.+.+..   ....+.+..|..++..+ +|++|+++.+++...+..+||||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            5667899999999999998754 6789999987532   22334577788887776 58999999999988899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (323)
T cd05616          82 Y   82 (323)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.42  E-value=8.1e-07  Score=83.75  Aligned_cols=71  Identities=24%  Similarity=0.478  Sum_probs=57.9

Q ss_pred             cCcccccCceEEEEEEEcC---CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey  399 (399)
                      ..+||+|+||.||++...+   +..+|+|.+....  ....+.+|+.++.+++||||+++.+++..  ....++|+||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            4689999999999998753   4689999986542  23468899999999999999999998854  4567899986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.42  E-value=1e-06  Score=83.83  Aligned_cols=76  Identities=25%  Similarity=0.280  Sum_probs=62.5

Q ss_pred             CcccCcccccCceEEEEEEE----cCCcEEEEEEecCC----ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKN----SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~----~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  394 (399)
                      |...++||+|+||.||++..    ..+..+|+|.+.+.    .....+.+..|+.++..+ +|+||+++.+++...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            56678999999999998875    24788999998643    122345688899999999 5999999999998889999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        82 lv~e~   86 (332)
T cd05614          82 LILDY   86 (332)
T ss_pred             EEEeC
Confidence            99997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.42  E-value=1.4e-06  Score=79.99  Aligned_cols=78  Identities=26%  Similarity=0.434  Sum_probs=63.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  393 (399)
                      .+|...+.||+|+||.||++... ++..+++|.+...     .......+.+|++++.+++|+||+++++++...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            45777899999999999999864 4889999987532     223345789999999999999999999988654  457


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        82 ~~v~e~   87 (264)
T cd06653          82 SIFVEY   87 (264)
T ss_pred             EEEEEe
Confidence            889886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.41  E-value=9.4e-08  Score=99.94  Aligned_cols=73  Identities=38%  Similarity=0.493  Sum_probs=60.2

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      ...+|+..+.||+|+||.|||...+ +|+.+|||+|... +.+......+|++++++|+|||||+++..+.+...
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence            3456888899999999999999865 6999999999765 33334568899999999999999999988766543

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.41  E-value=3.8e-07  Score=83.76  Aligned_cols=72  Identities=38%  Similarity=0.616  Sum_probs=60.2

Q ss_pred             CcccccCceEEEEEEEcC-------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++...+       +..+++|.+.... ......|.+|+.+++.++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998743       2578999886542 23456799999999999999999999999888889999997

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.41  E-value=9e-07  Score=83.72  Aligned_cols=72  Identities=26%  Similarity=0.286  Sum_probs=58.7

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... .+..||+|.++...   ......+..|..++.. ++|+||+++++.+...+..+|||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   77 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEF   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECC
Confidence            46999999999999986 47899999997531   1233456778877765 4899999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.41  E-value=8.2e-07  Score=84.58  Aligned_cols=74  Identities=22%  Similarity=0.406  Sum_probs=61.5

Q ss_pred             ccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhh--------------HHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          326 TDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG--------------ELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       326 ~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      ..+.||+|+||.||++... .++.||+|.+.......              ...+.+|++++..++|+||+++++++...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            3578999999999999865 48899999986532111              12478999999999999999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..++||||
T Consensus        93 ~~~~lv~e~  101 (335)
T PTZ00024         93 DFINLVMDI  101 (335)
T ss_pred             CcEEEEEec
Confidence            999999997

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.41  E-value=1e-06  Score=80.53  Aligned_cols=72  Identities=28%  Similarity=0.532  Sum_probs=57.8

Q ss_pred             CcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey  399 (399)
                      +.||+|+||.||+|...+    ...+|+|.+... .....+.+..|+.+++.++||||+++++++.. ++..++++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            468999999999998632    357999998643 33445688999999999999999999998764 4457889986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.40  E-value=5.1e-07  Score=81.13  Aligned_cols=78  Identities=28%  Similarity=0.409  Sum_probs=66.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|.....||.|+||.|.....+. |...|+|.|.+..   .+..+...+|..+|..+.||.+++|.+.+...+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            346667899999999999988754 7789999997753   234556889999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       124 ey  125 (355)
T KOG0616|consen  124 EY  125 (355)
T ss_pred             ec
Confidence            97

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.40  E-value=1.2e-06  Score=80.98  Aligned_cols=70  Identities=29%  Similarity=0.396  Sum_probs=59.1

Q ss_pred             ccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++... +++.+++|.+....   ......+..|++++..++||||+++.+.+...+..+||+||
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEec
Confidence            689999999999865 47899999986532   22244578899999999999999999999888999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.38  E-value=7.3e-07  Score=85.86  Aligned_cols=73  Identities=15%  Similarity=0.233  Sum_probs=61.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+|...+.||+|+||.||++.... +..||+|.....      ....|+.++.+++|+||+++++++..++..++|+||
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            3468888999999999999999854 678999975432      245689999999999999999999999999999986

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.38  E-value=1.2e-06  Score=80.62  Aligned_cols=75  Identities=31%  Similarity=0.499  Sum_probs=58.5

Q ss_pred             cccCcccccCceEEEEEEEc----CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------e
Q 044262          325 STDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------E  392 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~  392 (399)
                      ...++||+|+||.||++.+.    .+..||+|.+...  .....+++.+|+.+++.++||||+++++++...+      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            45688999999999999864    2578999998654  3344567899999999999999999999876532      2


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++++||
T Consensus        82 ~~~~~~~   88 (273)
T cd05074          82 PMVILPF   88 (273)
T ss_pred             eEEEEec
Confidence            3566664

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.38  E-value=7.2e-07  Score=85.31  Aligned_cols=80  Identities=23%  Similarity=0.358  Sum_probs=63.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------  390 (399)
                      ..+.|...+.||+|+||.||++... .+..||||.+....  ....+.+.+|+.++..++|+||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            3466888899999999999999864 47889999986532  22345688999999999999999999877532      


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      ...++++|+
T Consensus        93 ~~~~~~~~~  101 (343)
T cd07878          93 NEVYLVTNL  101 (343)
T ss_pred             CcEEEEeec
Confidence            346788775

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.37  E-value=9.6e-07  Score=84.47  Aligned_cols=78  Identities=23%  Similarity=0.416  Sum_probs=63.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------Ce
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~  392 (399)
                      .+|...+.||+|+||.||+|... .++.||+|.+...  .......+.+|+.++..++|+||+++++++...      ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            56777899999999999999864 5889999998653  222335688999999999999999999988653      24


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++|+||
T Consensus        95 ~~lv~e~  101 (342)
T cd07879          95 FYLVMPY  101 (342)
T ss_pred             EEEEecc
Confidence            6888886

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.37  E-value=1.6e-06  Score=82.28  Aligned_cols=72  Identities=25%  Similarity=0.302  Sum_probs=57.0

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++.... ++.+|+|.+....   ......+..|.. ++..++|+||+++++.+...+..++||||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDY   77 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeC
Confidence            468999999999998754 6789999986532   122234555554 56789999999999999999999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.37  E-value=8.9e-07  Score=84.44  Aligned_cols=79  Identities=18%  Similarity=0.339  Sum_probs=63.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  393 (399)
                      .++|...++||+|+||.||++... +++.||+|.+... .......+..|+.++.+++|+||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            356788899999999999999864 5889999998643 223345688999999999999999999887654     347


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        84 ~lv~e~   89 (336)
T cd07849          84 YIVQEL   89 (336)
T ss_pred             EEEehh
Confidence            899886

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.37  E-value=1.2e-06  Score=83.04  Aligned_cols=76  Identities=21%  Similarity=0.162  Sum_probs=61.0

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      |...+.||+|+||.||++... +++.||+|.+...   .....+.+..|..++..+. |++|+++.+++...+..+||||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            456689999999999999875 4789999998753   2223456788888888875 5678889888888889999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 y   82 (323)
T cd05615          82 Y   82 (323)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.36  E-value=1.4e-06  Score=80.47  Aligned_cols=75  Identities=27%  Similarity=0.443  Sum_probs=60.4

Q ss_pred             cccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeC--CeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEG--TERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~Ey  399 (399)
                      ...++||+|.||.||++... ++..+|+|.++... ........+|+..+.++. |+|++++++++...  +..++|+||
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            44678999999999999875 47889999986542 222234568898899885 99999999999877  789999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.36  E-value=1.9e-06  Score=78.65  Aligned_cols=76  Identities=22%  Similarity=0.429  Sum_probs=61.9

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYE  398 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E  398 (399)
                      |...+.||+|+||.||++... ++..+++|.+...  .....+.+..|+.++.+++|+||+++++.+..  +...+++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            556788999999999999864 4788999998643  33445678999999999999999999997764  345789998


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (265)
T cd08217          82 Y   82 (265)
T ss_pred             h
Confidence            6

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.36  E-value=1.5e-06  Score=83.25  Aligned_cols=85  Identities=24%  Similarity=0.396  Sum_probs=67.2

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-  390 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-  390 (399)
                      .++...+++|...+.||+|+||.||++... ++..||+|++...  .....+.+.+|+.++.+++|+||+++.+++... 
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            456667788999999999999999999864 5889999998753  223345688999999999999999999987543 


Q ss_pred             -----CeEEEEEeC
Q 044262          391 -----TERLLIYEF  399 (399)
Q Consensus       391 -----~~~~lv~Ey  399 (399)
                           ...++++|+
T Consensus        90 ~~~~~~~~~lv~~~  103 (345)
T cd07877          90 SLEEFNDVYLVTHL  103 (345)
T ss_pred             cccccccEEEEehh
Confidence                 235677664

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.36  E-value=1.2e-06  Score=81.06  Aligned_cols=86  Identities=33%  Similarity=0.545  Sum_probs=68.8

Q ss_pred             ChhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe-
Q 044262          313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE-  389 (399)
Q Consensus       313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~-  389 (399)
                      ++.++..+.+.|+..++||+|+||.||++... .++.+|+|.+.... ....++..|+.++.++ +|+||+++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            34555566778888899999999999999974 47889999886543 3345688999999988 79999999999853 


Q ss_pred             -----CCeEEEEEeC
Q 044262          390 -----GTERLLIYEF  399 (399)
Q Consensus       390 -----~~~~~lv~Ey  399 (399)
                           .+..+++|||
T Consensus        86 ~~~~~~~~~~iv~e~  100 (282)
T cd06636          86 SPPGHDDQLWLVMEF  100 (282)
T ss_pred             cccCCCCEEEEEEEe
Confidence                 3568999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.36  E-value=9.4e-07  Score=84.27  Aligned_cols=79  Identities=23%  Similarity=0.447  Sum_probs=63.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC--CeEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG--TERL  394 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~  394 (399)
                      .++|...+.||+|+||.||+|... .+..+++|++...  .......+.+|+.++.++ +|+||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            345777899999999999999875 4788999988542  223345678899999999 999999999988653  3689


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      ||+||
T Consensus        86 lv~e~   90 (337)
T cd07852          86 LVFEY   90 (337)
T ss_pred             EEecc
Confidence            99997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.36  E-value=1.2e-06  Score=85.58  Aligned_cols=73  Identities=14%  Similarity=0.179  Sum_probs=61.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC---CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ..|...++||+|+||.||++...+   +..|++|.+...     ..+.+|+.+|.+++|+|||++++++......+++||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            457788999999999999997633   467999988543     245689999999999999999999988889999998


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       167 ~  167 (392)
T PHA03207        167 K  167 (392)
T ss_pred             h
Confidence            5

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.35  E-value=2.2e-06  Score=77.82  Aligned_cols=76  Identities=22%  Similarity=0.403  Sum_probs=65.6

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||++... ++..+++|.+....  ......+.+|++++..++|+|++++.+.+..++..+||+||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            556788999999999999985 47899999987643  24556799999999999999999999999888999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.35  E-value=1.9e-06  Score=78.69  Aligned_cols=71  Identities=38%  Similarity=0.641  Sum_probs=58.1

Q ss_pred             CcccccCceEEEEEEEcC----CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||+|.+..    +..+++|.+..... ...+++.+|+.++..+.|+|||++++++. .+..++||||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~   76 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMEL   76 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEe
Confidence            479999999999998633    26899999876533 34567999999999999999999999874 5567899986

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.35  E-value=7.9e-07  Score=88.72  Aligned_cols=80  Identities=20%  Similarity=0.455  Sum_probs=57.7

Q ss_pred             hcCCCcccCcccccCceEEEEEEE-----------------cCCcEEEEEEecCCChhhHHH--------------HHHH
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRL-----------------SHGQEIAVKRLSKNSVQGELE--------------FKNE  368 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~-----------------~~g~~vavK~l~~~~~~~~~~--------------f~~E  368 (399)
                      ..++|...++||+|+||.||+|..                 ..++.||||++........++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467889999999999999999964                 134679999986543322233              4456


Q ss_pred             HHHHhcCCCCCc-----cceeEEEEe--------CCeEEEEEeC
Q 044262          369 VLLVARLQHRNL-----VRLLGFSFE--------GTERLLIYEF  399 (399)
Q Consensus       369 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~Ey  399 (399)
                      +.++.+++|.++     ++++|++..        ....+|||||
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey  266 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKF  266 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEc
Confidence            777777777654     677887753        3568999997

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.34  E-value=6e-07  Score=82.70  Aligned_cols=78  Identities=21%  Similarity=0.397  Sum_probs=63.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-----CCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-----GTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----~~~~  393 (399)
                      ..+...+.||+|+||.|.++..+ .|+.||||++...  ..-..+.-.+|+++|+.++|+||+.++.....     -+..
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            34444688999999999999875 4899999999732  44445678999999999999999999988765     2558


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++|+|+
T Consensus       102 YiV~el  107 (359)
T KOG0660|consen  102 YLVFEL  107 (359)
T ss_pred             EEehhH
Confidence            999885

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.34  E-value=2e-06  Score=78.71  Aligned_cols=70  Identities=21%  Similarity=0.305  Sum_probs=60.6

Q ss_pred             ccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||.|+||.||++.... ++.+++|.+....   ....+.+.+|+.++..++|+||+++++.+..+...++++||
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEec
Confidence            6999999999999854 7899999986542   23345799999999999999999999999988999999997

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.34  E-value=2.1e-06  Score=81.61  Aligned_cols=72  Identities=22%  Similarity=0.329  Sum_probs=60.3

Q ss_pred             Cccccc--CceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQG--GFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G--~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+||+|  +||.||++... .++.||+|.+...  .....+.+.+|+.++..++||||+++++++..++..++|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~   80 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF   80 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence            456776  89999999874 5899999998653  333446788999999999999999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.34  E-value=9.5e-07  Score=84.52  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=64.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC----------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG----------  390 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----------  390 (399)
                      .+|...+.||+|+||.||++... .+..|++|.+........+.+.+|++++.+++|+||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            45777899999999999999875 4789999998766555566789999999999999999998766543          


Q ss_pred             ----CeEEEEEeC
Q 044262          391 ----TERLLIYEF  399 (399)
Q Consensus       391 ----~~~~lv~Ey  399 (399)
                          ...++|+||
T Consensus        85 ~~~~~~~~lv~e~   97 (342)
T cd07854          85 LTELNSVYIVQEY   97 (342)
T ss_pred             ccccceEEEEeec
Confidence                347899987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.33  E-value=7.7e-07  Score=82.07  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=65.3

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +|...+.||+|+||.||++... ++..+++|.+...   .......+.+|..++.+++ |+||+++++.+...+..++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            4667789999999999999975 5889999998653   2233457889999999998 999999999998888999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (280)
T cd05581          82 EY   83 (280)
T ss_pred             cC
Confidence            96

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.33  E-value=8e-07  Score=82.27  Aligned_cols=76  Identities=30%  Similarity=0.486  Sum_probs=62.5

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||+|+||.||+|...+ ++.|++|.+..... .......+|+..+.+++ |+||+++++.+..++..++||||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence            3456889999999999999864 78899999865422 22234567999999999 99999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.32  E-value=1.4e-06  Score=87.55  Aligned_cols=83  Identities=17%  Similarity=0.213  Sum_probs=65.8

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--  391 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--  391 (399)
                      .....++|...++||+|+||.||++... +++.||||.+...  .......+.+|+..+..++|+||+++...+...+  
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~  106 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR  106 (496)
T ss_pred             ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence            3444567888999999999999999864 5889999998654  3444567899999999999999999887664332  


Q ss_pred             ------eEEEEEeC
Q 044262          392 ------ERLLIYEF  399 (399)
Q Consensus       392 ------~~~lv~Ey  399 (399)
                            ..++||||
T Consensus       107 ~~~~~~~i~lV~Ey  120 (496)
T PTZ00283        107 NPENVLMIALVLDY  120 (496)
T ss_pred             CcccceEEEEEEeC
Confidence                  26789987

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.32  E-value=1.2e-06  Score=79.82  Aligned_cols=73  Identities=33%  Similarity=0.625  Sum_probs=60.9

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|...+.||+|+||.||++.. .+..+++|.++...  ....+.+|+.++..++|+|++++++.+.. +..+++|||
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~   79 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMEL   79 (254)
T ss_pred             HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEEC
Confidence            466779999999999999976 67789999986532  23578999999999999999999998864 457899987

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.32  E-value=1.3e-06  Score=79.43  Aligned_cols=76  Identities=26%  Similarity=0.446  Sum_probs=64.6

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...++||+|.||.||++... ++..+++|.+...  ......++.+|+++++.++|+||+++.+.+......++|+||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            566789999999999999764 4788999998653  334455788999999999999999999999888999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.31  E-value=1.4e-06  Score=79.43  Aligned_cols=70  Identities=19%  Similarity=0.283  Sum_probs=60.8

Q ss_pred             ccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++.... ++.+++|.+.....   ...+.+.+|+.++..++|+||+++.+.+..+...++++||
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   74 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEY   74 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEec
Confidence            6899999999999865 88999999865432   3455789999999999999999999999888899999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.31  E-value=2.1e-06  Score=78.32  Aligned_cols=74  Identities=30%  Similarity=0.537  Sum_probs=61.7

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey  399 (399)
                      +|...+.||+|+||.||++.. .+..+++|.++...  ..+.|.+|+.++..++|+|++++++++.. ++..++++||
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           7 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             hCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            566779999999999999987 47789999986432  24579999999999999999999998654 4568999997

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.31  E-value=2.2e-06  Score=82.30  Aligned_cols=79  Identities=24%  Similarity=0.403  Sum_probs=64.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------T  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~  391 (399)
                      ...|...+.||+|+||.||++... .++.||+|.+...  .......+.+|+.++..++|+||+++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            356778899999999999999864 5889999998643  333445788999999999999999999987543      3


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+||+||
T Consensus        95 ~~~lv~e~  102 (353)
T cd07850          95 DVYLVMEL  102 (353)
T ss_pred             cEEEEEec
Confidence            46899997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.31  E-value=5.1e-08  Score=95.46  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=66.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|.+...||.|+||+|||++.++ +...|.|.|...+....++|+-||++|....||+||+|++.+.-.+.+||+.||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            334455788999999999999765 445678888877778888999999999999999999999988888889999887

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.31  E-value=2.4e-06  Score=79.49  Aligned_cols=76  Identities=26%  Similarity=0.316  Sum_probs=62.8

Q ss_pred             CcccCcccccCceEEEEEEE----cCCcEEEEEEecCCC----hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS----VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  394 (399)
                      |+..+.||+|+||.||++..    .+|..+|+|.+....    ....+.+.+|+.++..+ +|+||+++.+++..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            55678999999999999875    357889999986532    12345688999999999 6999999999988888899


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +|+||
T Consensus        82 lv~e~   86 (290)
T cd05613          82 LILDY   86 (290)
T ss_pred             EEEec
Confidence            99997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.30  E-value=2e-06  Score=79.71  Aligned_cols=76  Identities=32%  Similarity=0.478  Sum_probs=58.4

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .|...+.||+|+||.||+|.+. ++.    .+++|.+.... .....++..|+..+.+++|+||++++|++. +...+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence            4566789999999999999874 343    47888875442 233457888888999999999999999875 4456778


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        87 ~e~   89 (279)
T cd05111          87 TQL   89 (279)
T ss_pred             EEe
Confidence            876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.29  E-value=1.2e-06  Score=82.30  Aligned_cols=79  Identities=25%  Similarity=0.478  Sum_probs=62.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  391 (399)
                      .++|...++||+|+||.||++... +++.+++|.+.....  .....+.+|++++..++|+||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            457788899999999999999975 478899999865322  22346789999999999999999998875433      


Q ss_pred             --eEEEEEeC
Q 044262          392 --ERLLIYEF  399 (399)
Q Consensus       392 --~~~lv~Ey  399 (399)
                        ..++|+||
T Consensus        87 ~~~~~lv~~~   96 (311)
T cd07866          87 RGSVYMVTPY   96 (311)
T ss_pred             CceEEEEEec
Confidence              36889886

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.29  E-value=2.1e-06  Score=79.68  Aligned_cols=76  Identities=32%  Similarity=0.506  Sum_probs=57.2

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEEe-----CCe
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSFE-----GTE  392 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~~~  392 (399)
                      |...+.||+|+||.||++... +++.||+|.++...  ......+.+|+.++..+   +|+||+++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            556789999999999999875 47899999986532  12223566777766654   79999999998764     244


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++++||
T Consensus        82 ~~lv~e~   88 (288)
T cd07863          82 VTLVFEH   88 (288)
T ss_pred             EEEEEcc
Confidence            7899986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.29  E-value=2.5e-06  Score=78.90  Aligned_cols=77  Identities=30%  Similarity=0.513  Sum_probs=61.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ..|...++||+|+||.||+|.+. ++.    .||+|.++.. ......++.+|+.++..++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            34667799999999999999863 343    4899998754 33445679999999999999999999999865 44667


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ++||
T Consensus        86 ~~~~   89 (279)
T cd05109          86 VTQL   89 (279)
T ss_pred             EEEc
Confidence            7775

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=7e-07  Score=85.74  Aligned_cols=77  Identities=30%  Similarity=0.380  Sum_probs=64.1

Q ss_pred             CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      -|..++.||+|.|..|-.+.. =.|..||||.+.+..  .-....++.|++.|+-++|||||+|+.+.-.+..+|||+|+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            355668999999999987653 258999999998763  33445789999999999999999999998888889999984

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.28  E-value=1.4e-06  Score=83.04  Aligned_cols=78  Identities=13%  Similarity=0.305  Sum_probs=63.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  394 (399)
                      .+|...++||+|+||.||++... .+..|++|++....  ......+.+|+.+|..++|+||+++.+++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            56777899999999999999875 48899999987542  2334568889999999999999999987653    34588


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +|+||
T Consensus        85 lv~e~   89 (334)
T cd07855          85 VVMDL   89 (334)
T ss_pred             EEEeh
Confidence            99987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.28  E-value=2.1e-06  Score=80.64  Aligned_cols=77  Identities=34%  Similarity=0.629  Sum_probs=59.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +.|...+.||+|+||.||++... ++.    .+|+|.+.... .....++.+|+.++..++|+||++++|++... ...+
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            34566789999999999999864 343    57899886542 23344789999999999999999999998654 4567


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ++||
T Consensus        86 v~e~   89 (303)
T cd05110          86 VTQL   89 (303)
T ss_pred             eehh
Confidence            7775

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.27  E-value=1.5e-06  Score=82.60  Aligned_cols=76  Identities=21%  Similarity=0.411  Sum_probs=64.4

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l  395 (399)
                      |...+.||+|+||.||++.... +..+++|.+....  ....+.+.+|+..+..++|+||+++.+++...+     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            5667899999999999999754 8899999987643  334567999999999999999999999987765     6899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      +|||
T Consensus        82 v~e~   85 (330)
T cd07834          82 VTEL   85 (330)
T ss_pred             Eecc
Confidence            9986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.27  E-value=3.7e-06  Score=74.57  Aligned_cols=75  Identities=35%  Similarity=0.570  Sum_probs=65.3

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...+.||+|.+|.||++...+ +..+++|.+...... ..+.+.+|++.+.+++|+|++++++.+...+..++++||
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence            446789999999999999875 789999999765443 566899999999999999999999999888889999986

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.26  E-value=2.4e-06  Score=86.87  Aligned_cols=87  Identities=30%  Similarity=0.525  Sum_probs=69.0

Q ss_pred             cChhhHHhhcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       312 ~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ..++.+..+++-|.+.++||+|.+|.||++.. ++++.+|+|++.... ...++...|..++..+ +|||++.+.|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            34556667778888999999999999999985 458889999886543 3334566777777765 79999999999864


Q ss_pred             -----CCeEEEEEeC
Q 044262          390 -----GTERLLIYEF  399 (399)
Q Consensus       390 -----~~~~~lv~Ey  399 (399)
                           ++.+||||||
T Consensus        88 ~~~~~~DqLWLVMEf  102 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEF  102 (953)
T ss_pred             ecCCCCCeEEEEeec
Confidence                 5789999998

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.26  E-value=3.5e-06  Score=76.67  Aligned_cols=76  Identities=21%  Similarity=0.301  Sum_probs=61.6

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey  399 (399)
                      |...+.||+|++|.||++.... ++.+++|.+...  .....+.+.+|++++++++|+|++++.+.+.. ....+++|||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            5667899999999999998754 678999998643  23345578999999999999999999988754 3457899986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.26  E-value=1.8e-06  Score=82.38  Aligned_cols=78  Identities=18%  Similarity=0.404  Sum_probs=62.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  393 (399)
                      ..|...+.||+|+||.||++... .+..||||.+...  .......+.+|+.++..++|+||+++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            45777889999999999999864 4789999998653  223345678899999999999999999987643     247


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +||+||
T Consensus        85 ~lv~e~   90 (337)
T cd07858          85 YIVYEL   90 (337)
T ss_pred             EEEEeC
Confidence            999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.25  E-value=1.1e-06  Score=86.83  Aligned_cols=77  Identities=23%  Similarity=0.387  Sum_probs=65.7

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      -|..++.||.|+-|.|-.|+.. .|+.+|||.+.+...   .......+||.+|+-+.|||+++|+.++.+..++|||+|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            3566799999999999999864 599999999976522   223357899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        93 y   93 (786)
T KOG0588|consen   93 Y   93 (786)
T ss_pred             e
Confidence            8

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.24  E-value=8.1e-07  Score=86.41  Aligned_cols=76  Identities=25%  Similarity=0.392  Sum_probs=62.0

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCC---CCCccceeEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQ---HRNLVRLLGFSFEG  390 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~  390 (399)
                      .|...+++|+|+||+|+.+.++. ...|.||.+.+..-        ........||.+|..++   |+||++++.++.++
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            46778999999999999999865 46799999865421        01113567999999997   99999999999999


Q ss_pred             CeEEEEEe
Q 044262          391 TERLLIYE  398 (399)
Q Consensus       391 ~~~~lv~E  398 (399)
                      +..+|++|
T Consensus       642 d~yyl~te  649 (772)
T KOG1152|consen  642 DYYYLETE  649 (772)
T ss_pred             CeeEEEec
Confidence            99999987

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.23  E-value=1.8e-06  Score=85.33  Aligned_cols=76  Identities=24%  Similarity=0.421  Sum_probs=63.6

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-C-----CCccceeEEEEeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-H-----RNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l  395 (399)
                      .|.+.+.||+|.||+|.|+.-. .++.||||+++... .-..+-..|+.+|..|+ |     -|+|++++++.-.++++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            5677899999999999999864 48999999996543 33446778999999886 4     399999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+|.
T Consensus       266 VfEL  269 (586)
T KOG0667|consen  266 VFEL  269 (586)
T ss_pred             eehh
Confidence            9984

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.23  E-value=1.6e-06  Score=80.02  Aligned_cols=75  Identities=29%  Similarity=0.504  Sum_probs=64.1

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...+.||+|.||.||++.... ++.+++|.+....  ....+.+..|+.+++.++|+||+++.+++...+..++|+||
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   79 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY   79 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence            345789999999999999864 8899999987652  33345788999999999999999999999988899999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.22  E-value=4.1e-06  Score=77.54  Aligned_cols=75  Identities=29%  Similarity=0.465  Sum_probs=59.1

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCCe-----E
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSFEGTE-----R  393 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~-----~  393 (399)
                      ...++||+|.||.||++..+. +..+|+|.+....  ......+.+|+.++.++   +|+|++++++++...+.     .
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   81 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL   81 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence            456889999999999999865 8899999997432  12234567787766555   69999999999987766     8


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +++|||
T Consensus        82 ~l~~e~   87 (287)
T cd07838          82 TLVFEH   87 (287)
T ss_pred             EEEehh
Confidence            999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.21  E-value=1.4e-06  Score=81.07  Aligned_cols=84  Identities=25%  Similarity=0.382  Sum_probs=64.4

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      .++...++++....++-+|.||.||+|.|.+      .+.|-||.++.. +.-...-++.|..++..+.|||+++..|++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            4555566778888999999999999997743      345778887665 333445689999999999999999999999


Q ss_pred             EeC-CeEEEEEe
Q 044262          388 FEG-TERLLIYE  398 (399)
Q Consensus       388 ~~~-~~~~lv~E  398 (399)
                      .+. +.++++|.
T Consensus       357 ie~~~~P~V~y~  368 (563)
T KOG1024|consen  357 IEDYATPFVLYP  368 (563)
T ss_pred             eeccCcceEEEe
Confidence            875 34555554

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.21  E-value=3.1e-06  Score=78.66  Aligned_cols=76  Identities=25%  Similarity=0.286  Sum_probs=62.3

Q ss_pred             CcccCcccccCceEEEEEEEc----CCcEEEEEEecCCC----hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNS----VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  394 (399)
                      |...+.||+|+||.||++...    +++.+|||.++...    ....+.+.+|+.++..+ +|+||+++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            456789999999999998752    46789999986432    22345688999999999 5999999999998888899


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        82 lv~e~   86 (288)
T cd05583          82 LILDY   86 (288)
T ss_pred             EEEec
Confidence            99997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PRK10345 hypothetical protein; Provisional

Probab=98.21  E-value=5.9e-06  Score=73.05  Aligned_cols=74  Identities=20%  Similarity=0.276  Sum_probs=55.8

Q ss_pred             CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-----CCCCccceeEEEEeCC---e-EE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-----QHRNLVRLLGFSFEGT---E-RL  394 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~  394 (399)
                      +...+.||+|+||.||.  .+.....+||.+........+.+.+|+..+..+     .||||++++|++..+.   . ..
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            34568999999999996  433333469988665444556799999999999     5799999999998763   3 33


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +|+||
T Consensus        82 ~I~e~   86 (210)
T PRK10345         82 VIADF   86 (210)
T ss_pred             EEecC
Confidence            77886

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.21  E-value=5e-06  Score=79.04  Aligned_cols=70  Identities=24%  Similarity=0.285  Sum_probs=55.6

Q ss_pred             ccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARL---QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++... .++.||+|.+....   ......+..|..++..+   +||||+++.+.+...+..+|||||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~   77 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY   77 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence            799999999999875 48899999986431   12233456677766654   699999999999999999999997

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.19  E-value=3.1e-06  Score=78.19  Aligned_cols=75  Identities=28%  Similarity=0.464  Sum_probs=63.7

Q ss_pred             cccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...+.||+|++|.||++... +++.+++|.+.....  .....+.+|+.+++.++|+||+++.+.+..++..++|+||
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence            34578999999999999875 578899999865422  2345788999999999999999999999988999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.19  E-value=3.8e-07  Score=82.41  Aligned_cols=77  Identities=22%  Similarity=0.452  Sum_probs=61.4

Q ss_pred             CCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERL  394 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~  394 (399)
                      .|+....||+|.||.|||+.-++     ...+|+|.++....  .-.....+|+.++++++||||+.|.-++.+ +...+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            45667889999999999996533     23689999875422  223467899999999999999999998887 66789


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |++||
T Consensus       105 l~fdY  109 (438)
T KOG0666|consen  105 LLFDY  109 (438)
T ss_pred             EEehh
Confidence            99998

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.19  E-value=1.7e-06  Score=83.10  Aligned_cols=78  Identities=19%  Similarity=0.312  Sum_probs=63.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-EEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-RLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lv~  397 (399)
                      +++...++||+|+||.++....+ ++..+++|.+.-.  ....++...+|+.++++++|||||.....+.+.+. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            34566789999999999876654 4678999988643  33344578999999999999999999999988877 99999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        84 ~Y   85 (426)
T KOG0589|consen   84 EY   85 (426)
T ss_pred             ee
Confidence            98

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.19  E-value=1.1e-06  Score=87.36  Aligned_cols=71  Identities=30%  Similarity=0.447  Sum_probs=62.2

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      -+||+|.||+||.|.-.+ -..+|||.+........+.+..||.+.+.|+|.|||+.+|.+.++..+.|.||
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME  652 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME  652 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence            479999999999998544 45789999987766666789999999999999999999999999998888887

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.17  E-value=1.9e-06  Score=78.65  Aligned_cols=76  Identities=24%  Similarity=0.385  Sum_probs=58.9

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      |...++||+|+||.||++.... +..+++|.++..     ......++..|+.++.+++||||+++++.+...+..++|+
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            5567899999999999998643 344555555431     2223346778999999999999999999998888899999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        82 e~   83 (260)
T cd08222          82 EY   83 (260)
T ss_pred             Ee
Confidence            97

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.16  E-value=2.6e-06  Score=85.80  Aligned_cols=77  Identities=21%  Similarity=0.407  Sum_probs=57.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC--CcEEEEE------------------EecCCChhhHHHHHHHHHHHhcCCCCCcc
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH--GQEIAVK------------------RLSKNSVQGELEFKNEVLLVARLQHRNLV  381 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~--g~~vavK------------------~l~~~~~~~~~~f~~E~~~l~~l~H~niv  381 (399)
                      +.|...++||+|+||.||++.++.  +...++|                  .+. ........+.+|+.+|.+++|+|||
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCcC
Confidence            568888999999999999987532  1112222                  111 1122345688999999999999999


Q ss_pred             ceeEEEEeCCeEEEEEeC
Q 044262          382 RLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++++++...+..++|+|+
T Consensus       227 ~l~~~~~~~~~~~lv~e~  244 (501)
T PHA03210        227 KIEEILRSEANTYMITQK  244 (501)
T ss_pred             cEeEEEEECCeeEEEEec
Confidence            999999999999999874

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.15  E-value=6.5e-08  Score=84.53  Aligned_cols=78  Identities=27%  Similarity=0.452  Sum_probs=63.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.++..++||+|.|+.|++.... .|+..|+|.+...  +..+.+++.+|+.+-+.|+|||||+|.....+....+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            44566789999999999987653 4777788776432  33456789999999999999999999998888888999998


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      +
T Consensus        91 ~   91 (355)
T KOG0033|consen   91 L   91 (355)
T ss_pred             c
Confidence            5

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.15  E-value=2.4e-06  Score=81.72  Aligned_cols=80  Identities=21%  Similarity=0.389  Sum_probs=64.6

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe----
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE----  392 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----  392 (399)
                      ..++|.....||+|+||.||++.... +..+|+|.+...  .......+.+|+.++++++|+||+++.+++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            34567788999999999999999854 788999998653  22334568889999999999999999987765554    


Q ss_pred             --EEEEEeC
Q 044262          393 --RLLIYEF  399 (399)
Q Consensus       393 --~~lv~Ey  399 (399)
                        .++|+||
T Consensus        93 ~~~~lv~e~  101 (343)
T cd07851          93 QDVYLVTHL  101 (343)
T ss_pred             ccEEEEEec
Confidence              8899986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.14  E-value=5.4e-06  Score=75.05  Aligned_cols=70  Identities=27%  Similarity=0.357  Sum_probs=60.2

Q ss_pred             ccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|+||.||++.... ++.+++|.+.....   .....+..|+.+++.++|+||+++++.+..++..+++|||
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEec
Confidence            6999999999999754 78999999876422   2345789999999999999999999999888999999996

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.13  E-value=3.8e-06  Score=78.81  Aligned_cols=77  Identities=25%  Similarity=0.278  Sum_probs=65.5

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .|...+.||.|.-|.||.+.+.+ +...|+|.+.+...   +.....+.|-++|..++||-|..|++.+......+|+||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            45566899999999999999965 57899999977533   333456778899999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       158 y  158 (459)
T KOG0610|consen  158 Y  158 (459)
T ss_pred             c
Confidence            8

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.10  E-value=1.5e-05  Score=72.71  Aligned_cols=72  Identities=21%  Similarity=0.308  Sum_probs=55.8

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHH-hcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLV-ARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.||+|+||.||++... .++.||+|.+.....   .....+..|..++ ...+|+|++++++.+...+..++|+||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEY   78 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEec
Confidence            56899999999999874 478999999865422   2223345555443 456899999999999999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.07  E-value=9e-07  Score=77.66  Aligned_cols=83  Identities=23%  Similarity=0.327  Sum_probs=68.7

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEE-EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----  390 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----  390 (399)
                      +....++|.+.+.||+|+|..||.++ +.++..+|+|++...+.++.+..++|++.-++++|||+++++.+...+     
T Consensus        16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence            34445667888999999999999887 456889999999888777788899999999999999999999876543     


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      .+.||++.|
T Consensus        96 ~~~yll~Py  104 (302)
T KOG2345|consen   96 HEAYLLLPY  104 (302)
T ss_pred             eeEEEEeeh
Confidence            347888765

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.06  E-value=9.9e-06  Score=76.27  Aligned_cols=71  Identities=15%  Similarity=0.165  Sum_probs=57.5

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.+|.|+++.|+++.. .++.+|+|++...  .....+.+.+|+.++..++|+||+++++++...+..+++|||
T Consensus         8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~   80 (314)
T cd08216           8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPL   80 (314)
T ss_pred             HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEec
Confidence            4455566666666655 6889999998654  334456799999999999999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.04  E-value=1.2e-06  Score=77.55  Aligned_cols=77  Identities=25%  Similarity=0.347  Sum_probs=62.7

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC-hhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS-VQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +++....||.|.||.|+|-..+. |+..|||++.... ....+.++.|.+. |+.-+-||||+++|.+..+...|+-||+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            34455789999999999988754 8999999998763 3556678888874 5566789999999999998889998873

>PTZ00284 protein kinase; Provisional

Probab=98.04  E-value=1.3e-05  Score=80.24  Aligned_cols=82  Identities=18%  Similarity=0.224  Sum_probs=59.8

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC------CCccceeEEEEe
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH------RNLVRLLGFSFE  389 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H------~niv~l~g~~~~  389 (399)
                      +....++|...++||+|+||.||++... .++.||||+++... ....++..|+.++.+++|      .+++++..++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3345577888999999999999999874 47889999996532 223355667777666654      458888888765


Q ss_pred             C-CeEEEEEeC
Q 044262          390 G-TERLLIYEF  399 (399)
Q Consensus       390 ~-~~~~lv~Ey  399 (399)
                      . ...+||||+
T Consensus       203 ~~~~~~iv~~~  213 (467)
T PTZ00284        203 ETGHMCIVMPK  213 (467)
T ss_pred             CCceEEEEEec
Confidence            4 568888875

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.99  E-value=1.1e-05  Score=70.49  Aligned_cols=71  Identities=20%  Similarity=0.218  Sum_probs=50.0

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCCChh--h-------H-----------------HHHHHHHHHHhcCCCCCc
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ--G-------E-----------------LEFKNEVLLVARLQHRNL  380 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~--~-------~-----------------~~f~~E~~~l~~l~H~ni  380 (399)
                      ...||+|+||.||+|...+|+.||||.++.....  .       .                 .....|++.|.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4689999999999999888999999999654210  0       0                 112348999999988876


Q ss_pred             cceeEEEEeCCeEEEEEeC
Q 044262          381 VRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       381 v~l~g~~~~~~~~~lv~Ey  399 (399)
                      .......  ....+|||||
T Consensus        82 ~~p~~~~--~~~~~iVmE~   98 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEF   98 (190)
T ss_pred             CCCcEEE--ecCCEEEEEE
Confidence            4433322  2234899997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=97.98  E-value=6.7e-06  Score=79.66  Aligned_cols=78  Identities=24%  Similarity=0.342  Sum_probs=64.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .+|..++.||+|.|.+|+++.-. .++.+|||++.+.   .....+-..+|-..|..| .||.|++|+--+.+...+|.|
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            45777899999999999999864 4889999999764   222333467788888888 899999999998888899999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus       153 Le~  155 (604)
T KOG0592|consen  153 LEY  155 (604)
T ss_pred             EEe
Confidence            997

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=97.98  E-value=2.5e-05  Score=74.35  Aligned_cols=76  Identities=22%  Similarity=0.335  Sum_probs=58.1

Q ss_pred             CcccCcccccCceEEEEEEEcC---CcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC----CeE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG----TER  393 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~----~~~  393 (399)
                      |...+.||+|+||.||++....   +..+|+|.+...  .....+.+.+|+.++.++ +|+||+++++.+...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            5567889999999999999743   678999998643  222345688999999999 599999999876433    346


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++++||
T Consensus        82 ~~~~e~   87 (332)
T cd07857          82 YLYEEL   87 (332)
T ss_pred             EEEEec
Confidence            777775

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.97  E-value=4.3e-05  Score=66.38  Aligned_cols=70  Identities=33%  Similarity=0.588  Sum_probs=60.7

Q ss_pred             ccccCceEEEEEEEcC-CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+|.+|.||++.... +..+++|.+...... ....+.+|+..+..++|+++++++++.......++++||
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~   72 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEY   72 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEec
Confidence            6899999999999865 889999998765432 345799999999999999999999999888889999986

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.95  E-value=4e-05  Score=70.99  Aligned_cols=71  Identities=30%  Similarity=0.389  Sum_probs=53.3

Q ss_pred             cccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHH---HhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          329 KLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLL---VARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       329 ~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~---l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .||+|+||.||++... +++.+|+|.+.....   .....+.+|..+   +...+|+||+.+.+.+..++..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999875 478999998865321   112234455433   3345799999999999888899999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.94  E-value=9.3e-07  Score=87.35  Aligned_cols=81  Identities=21%  Similarity=0.382  Sum_probs=70.1

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .+.++|.....+|.|.+|.|||+.-. .++..|||.++-.........+.|+.+++..+|+|||.++|.+...+.+|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            45566778899999999999999864 47889999997665555667788999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        92 Ey   93 (829)
T KOG0576|consen   92 EY   93 (829)
T ss_pred             Ee
Confidence            98

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.94  E-value=7.8e-06  Score=79.39  Aligned_cols=78  Identities=22%  Similarity=0.357  Sum_probs=67.2

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecC--CChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSK--NSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~--~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ..|++.++||.|+-..|||....+.+.+|+|++..  .+.+....|.+|+.+|.+| .|.+||+|+++-..++.+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            34677899999999999999987778888887643  3556677899999999999 58999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       441 ~  441 (677)
T KOG0596|consen  441 C  441 (677)
T ss_pred             c
Confidence            7

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=97.87  E-value=5.7e-05  Score=69.86  Aligned_cols=71  Identities=31%  Similarity=0.365  Sum_probs=53.4

Q ss_pred             cccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHH---HHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          329 KLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEV---LLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       329 ~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~---~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +||+|+||.||++... .++.||+|.+.....   .....+..|.   ..+....|+||+++.+.+...+..++|+||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEec
Confidence            4899999999999864 478999999865421   1122244443   344556899999999999988999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.86  E-value=8.9e-05  Score=75.39  Aligned_cols=77  Identities=14%  Similarity=0.236  Sum_probs=56.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEe-cCC-Ch------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL-SKN-SV------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l-~~~-~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ..+...++||+|+||.||++.+... .+++|.. .+. ..      ...+.+.+|++++..++|++++....+....+..
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            3445678999999999999988544 3444432 211 10      1234688999999999999999888887777778


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus       412 ~lv~E~  417 (535)
T PRK09605        412 TIVMEY  417 (535)
T ss_pred             EEEEEe
Confidence            999997

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.85  E-value=5.4e-05  Score=66.00  Aligned_cols=71  Identities=21%  Similarity=0.280  Sum_probs=52.2

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCCChh---------------------h-----HHHHHHHHHHHhcCCCCCc
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ---------------------G-----ELEFKNEVLLVARLQHRNL  380 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~---------------------~-----~~~f~~E~~~l~~l~H~ni  380 (399)
                      ...||+|+||.||++...+|+.||||.++.....                     .     ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999878999999998754210                     0     1124578899999999988


Q ss_pred             cceeEEEEeCCeEEEEEeC
Q 044262          381 VRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       381 v~l~g~~~~~~~~~lv~Ey  399 (399)
                      .....+...  ..+|||||
T Consensus        82 ~~p~~~~~~--~~~lVmE~   98 (190)
T cd05145          82 PVPEPILLK--KNVLVMEF   98 (190)
T ss_pred             CCceEEEec--CCEEEEEE
Confidence            655444332  24799997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.84  E-value=2.7e-06  Score=73.83  Aligned_cols=76  Identities=21%  Similarity=0.466  Sum_probs=61.5

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC--eEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGT--ERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~lv  396 (399)
                      .+++++.+++|+|.++.|+.|.. .+.+.+.||.|++-.   .+...+|+.+|..|. ||||++|+....++.  ...||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            35677789999999999999973 467889999997543   347889999999997 999999999887653  36777


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus       114 FE~  116 (338)
T KOG0668|consen  114 FEY  116 (338)
T ss_pred             hhh
Confidence            775

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.83  E-value=5.2e-05  Score=67.75  Aligned_cols=66  Identities=27%  Similarity=0.497  Sum_probs=57.8

Q ss_pred             CceEEEEEEEcC-CcEEEEEEecCCChhh-HHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          334 GFGAVYKGRLSH-GQEIAVKRLSKNSVQG-ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       334 ~fG~Vykg~~~~-g~~vavK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +||.||++.... ++.+++|.+....... .+.+.+|++.+.+++|+|++++.+.+......++++||
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   68 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEY   68 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeC
Confidence            589999999865 8899999997654433 57899999999999999999999999988999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.81  E-value=5.9e-05  Score=66.70  Aligned_cols=71  Identities=11%  Similarity=0.204  Sum_probs=56.7

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|.+|.||+|.. .|..+++|.......        .....+.+|+.++..++|+++.....++...+..+|+|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5789999999999988 677899998654321        1123588999999999999998888777777788999987

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.75  E-value=0.00012  Score=67.26  Aligned_cols=73  Identities=18%  Similarity=0.185  Sum_probs=52.1

Q ss_pred             CCCcccCc--ccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNK--LGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~--iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +++...+.  ||+|.||.||++..+ ++..+++|.+........     |+..... .+|+||+++++.+...+..++||
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence            34444455  499999999999874 477899998865321111     2222221 26999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        89 e~   90 (267)
T PHA03390         89 DY   90 (267)
T ss_pred             Ec
Confidence            97

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.74  E-value=1.8e-05  Score=72.24  Aligned_cols=78  Identities=23%  Similarity=0.234  Sum_probs=64.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|.||+|....-+ .++..|+|+|++.   .......-+.|-++|...+||-+..|.-.+...+.++.||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            45666799999999999987654 4788999999764   3334446788999999999999999987777889999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       248 ey  249 (516)
T KOG0690|consen  248 EY  249 (516)
T ss_pred             EE
Confidence            97

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.70  E-value=7.7e-05  Score=66.55  Aligned_cols=78  Identities=14%  Similarity=0.123  Sum_probs=60.3

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhH---H------HHHHHHHHHhcCCCCCccceeEEEEeC-
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGE---L------EFKNEVLLVARLQHRNLVRLLGFSFEG-  390 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~---~------~f~~E~~~l~~l~H~niv~l~g~~~~~-  390 (399)
                      ..+|...+++|+|+||.||.... ++..+++|.+........   .      .+.+|+..+.+++|++|..+..+.... 
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            46788899999999999998665 566899999965422111   1      267899999999999999998875532 


Q ss_pred             -------CeEEEEEeC
Q 044262          391 -------TERLLIYEF  399 (399)
Q Consensus       391 -------~~~~lv~Ey  399 (399)
                             ...+|+|||
T Consensus       109 ~~~~~~~~~~~lvmEy  124 (232)
T PRK10359        109 RKTLRYAHTYIMLIEY  124 (232)
T ss_pred             cccccccCCeEEEEEE
Confidence                   357899997

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.70  E-value=8.8e-05  Score=64.97  Aligned_cols=70  Identities=16%  Similarity=0.303  Sum_probs=53.3

Q ss_pred             cccccCceEEEEEEEcCCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       329 ~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .||+|+||.||+|.+ ++..+++|.......        .....+.+|++++..++|+++.....+....+..+|||||
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            489999999999996 678899998654311        1124578899999999998876666666666777899986

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.59  E-value=9.8e-06  Score=85.84  Aligned_cols=79  Identities=27%  Similarity=0.415  Sum_probs=64.7

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +-+++....||.|.||.||-+.- .+|+..|+|.++-.  .......+.+|+.++..|+|||+|+.+|+-...+..+|.|
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence            34566789999999999999985 45888999988654  2233356889999999999999999999988888888888


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus      1314 Ey 1315 (1509)
T KOG4645|consen 1314 EY 1315 (1509)
T ss_pred             HH
Confidence            76

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.57  E-value=1.2e-05  Score=84.18  Aligned_cols=86  Identities=20%  Similarity=0.200  Sum_probs=71.3

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFE  389 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  389 (399)
                      ..+++-..++|.+.++||+|+||.|.....+. ++.+|.|+|.++.   .....-|..|-.+|..-+.+.||+|.-.+-+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            34556667889999999999999999988855 7788999998742   2233458888889998899999999988888


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      ...+||||||
T Consensus       147 ~~~LYlVMdY  156 (1317)
T KOG0612|consen  147 ERYLYLVMDY  156 (1317)
T ss_pred             ccceEEEEec
Confidence            9999999998

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.45  E-value=0.00044  Score=60.63  Aligned_cols=72  Identities=18%  Similarity=0.233  Sum_probs=51.4

Q ss_pred             CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChh----------------------hHHHHHHHHHHHhcCCCCC--
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ----------------------GELEFKNEVLLVARLQHRN--  379 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~----------------------~~~~f~~E~~~l~~l~H~n--  379 (399)
                      +...+.||+|+||.||++..++|+.||||.+......                      ....+..|..++..+.|++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            5567899999999999999888999999987543200                      0123667888888888774  


Q ss_pred             ccceeEEEEeCCeEEEEEeC
Q 044262          380 LVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       380 iv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.+.++    ....++||||
T Consensus        97 v~~~~~----~~~~~lv~e~  112 (198)
T cd05144          97 VPKPID----WNRHAVVMEY  112 (198)
T ss_pred             CCceee----cCCceEEEEE
Confidence            444443    2445888886

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.43  E-value=0.00028  Score=67.87  Aligned_cols=77  Identities=19%  Similarity=0.325  Sum_probs=61.2

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-----C---CCccceeEEEEe---
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----H---RNLVRLLGFSFE---  389 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~niv~l~g~~~~---  389 (399)
                      ..|....+||.|.|.+||.+.- .+.+.||+|+.+.. ....+..+.||++|.+++     |   .+||+|+..+..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            4577789999999999999975 45678999998653 344567899999999873     3   479999998864   


Q ss_pred             -CCeEEEEEeC
Q 044262          390 -GTERLLIYEF  399 (399)
Q Consensus       390 -~~~~~lv~Ey  399 (399)
                       +.+.+||+|+
T Consensus       157 NG~HVCMVfEv  167 (590)
T KOG1290|consen  157 NGQHVCMVFEV  167 (590)
T ss_pred             CCcEEEEEehh
Confidence             4679999986

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.37  E-value=9.2e-05  Score=73.14  Aligned_cols=75  Identities=28%  Similarity=0.390  Sum_probs=54.7

Q ss_pred             CcccCcccccCceEEEEEEEcC-CcEEEEEEec--C--CChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe--EEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLS--K--NSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE--RLLI  396 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~--~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lv  396 (399)
                      +...++||+|.|-+||||.-.. |..||=-.++  .  .+....+.|..|+.+|+.|+|+|||+++..+.....  .-+|
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            3456899999999999998632 5556522221  1  133445679999999999999999999998887655  4555


Q ss_pred             Ee
Q 044262          397 YE  398 (399)
Q Consensus       397 ~E  398 (399)
                      +|
T Consensus       122 TE  123 (632)
T KOG0584|consen  122 TE  123 (632)
T ss_pred             ee
Confidence            55

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.36  E-value=2.6e-06  Score=75.03  Aligned_cols=77  Identities=27%  Similarity=0.507  Sum_probs=56.8

Q ss_pred             CCcccCcccccCceEEEEEEEcC-CcEEEEEEecC-C-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--------C
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSK-N-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--------T  391 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~-~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~  391 (399)
                      .+....+||+|.||.||++..++ |+.||+|+..- . ...-...-++|+.+|..+.|+|++.++..|...        .
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            34556899999999999998755 67788876532 2 222234678999999999999999999877531        2


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      .++||++|
T Consensus        98 t~ylVf~~  105 (376)
T KOG0669|consen   98 TFYLVFDF  105 (376)
T ss_pred             eeeeeHHH
Confidence            36788754

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.33  E-value=0.00081  Score=62.76  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=48.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcCC----cEEEEEEecCCChhh-----------HHHHHHHHHHHhcCCCCCccceeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKNSVQG-----------ELEFKNEVLLVARLQHRNLVRLLGF  386 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g----~~vavK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~niv~l~g~  386 (399)
                      +.|...++||+|+||.||++...++    ..+++|.........           ......+...+..++|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            4677889999999999999997543    355666533221110           0112333445667799999999987


Q ss_pred             EEeCC----eEEEEEe
Q 044262          387 SFEGT----ERLLIYE  398 (399)
Q Consensus       387 ~~~~~----~~~lv~E  398 (399)
                      .....    ..++++|
T Consensus        92 ~~~~~~~~~~~~~~~~  107 (294)
T PHA02882         92 GSFKRCRMYYRFILLE  107 (294)
T ss_pred             eeEecCCceEEEEEEe
Confidence            65443    2355555

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=97.30  E-value=7.5e-05  Score=70.89  Aligned_cols=77  Identities=23%  Similarity=0.287  Sum_probs=58.8

Q ss_pred             CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---Ch----hhHHHHHHHHHHHhcCCCCCccceeEEEE-eCCeE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SV----QGELEFKNEVLLVARLQHRNLVRLLGFSF-EGTER  393 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~-~~~~~  393 (399)
                      .|-..++||+|+|..|||+.- ...+-||||+-...   ..    ...+...+|-.+...|+||.||+++.++. +.+.+
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            355678999999999999973 34577999975432   11    11245778999999999999999999886 45668


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +-|+||
T Consensus       544 CTVLEY  549 (775)
T KOG1151|consen  544 CTVLEY  549 (775)
T ss_pred             eeeeee
Confidence            888887

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.30  E-value=0.0006  Score=56.05  Aligned_cols=70  Identities=16%  Similarity=0.106  Sum_probs=57.1

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC--CCccceeEEEEeCCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH--RNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.||+|.++.||++...+ ..+++|.......  ...+..|+..+..++|  .++.++++.....+..++++||
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~   74 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW   74 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence            4679999999999999844 7899998865433  4578999999999976  4888988887766778999986

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.23  E-value=0.00018  Score=67.90  Aligned_cols=78  Identities=24%  Similarity=0.422  Sum_probs=64.8

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  394 (399)
                      ..+.+...++||+|.|+.||++....    .+.||+|.+...+.  .....+|+++|..+ .|.||+++.++...++...
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            34557778999999999999998643    56899999865432  23588999999988 5899999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +|+||
T Consensus       112 ivlp~  116 (418)
T KOG1167|consen  112 IVLPY  116 (418)
T ss_pred             EEecc
Confidence            99997

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.21  E-value=0.00075  Score=60.76  Aligned_cols=62  Identities=23%  Similarity=0.225  Sum_probs=50.4

Q ss_pred             cCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          333 GGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       333 G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |.||.||++... +++.+|+|.+....     .+.+|...+....||||+++++++...+..+|||||
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   66 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQH   66 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEec
Confidence            889999999864 47899999986543     344555556666799999999999989999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>smart00090 RIO RIO-like kinase

Probab=97.17  E-value=0.001  Score=60.16  Aligned_cols=73  Identities=21%  Similarity=0.256  Sum_probs=50.6

Q ss_pred             CCcccCcccccCceEEEEEE--EcCCcEEEEEEecCCChh------------------------hHHHHHHHHHHHhcCC
Q 044262          323 NFSTDNKLGQGGFGAVYKGR--LSHGQEIAVKRLSKNSVQ------------------------GELEFKNEVLLVARLQ  376 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~--~~~g~~vavK~l~~~~~~------------------------~~~~f~~E~~~l~~l~  376 (399)
                      .+...+.||+|+||.||+|.  ..+|+.||+|.++.....                        ....+..|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35567899999999999998  567999999998643210                        0123568999999987


Q ss_pred             CCC--ccceeEEEEeCCeEEEEEeC
Q 044262          377 HRN--LVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       377 H~n--iv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |.+  +.+.++.    ...+|||||
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~  129 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEF  129 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEE
Confidence            633  3333332    234799986

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.13  E-value=0.0003  Score=71.76  Aligned_cols=72  Identities=29%  Similarity=0.403  Sum_probs=56.4

Q ss_pred             CcccCcccccCce-EEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFG-AVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG-~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+++|.|.-| .||+|.+ +|+.||||++-...   ..-..+||..|..- .|||||++++.-......||..|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL  584 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence            4556788999886 5699999 78899999985432   22357899988765 799999998887777888888773

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.88  E-value=0.0023  Score=55.24  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=27.2

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN  357 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~  357 (399)
                      .+.||+|+||.||++...+++.||||.+...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence            4679999999999999877999999998653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.84  E-value=0.00017  Score=67.98  Aligned_cols=78  Identities=22%  Similarity=0.179  Sum_probs=59.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .+|....+||+|+||+|..++-+. .+..|||+|++.   ...+.+--+.|-++|.-. +-|-+|+|..++..-+.++.|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            356778999999999999998754 567999999764   222233345666666644 567899999888888999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       429 MEy  431 (683)
T KOG0696|consen  429 MEY  431 (683)
T ss_pred             EEE
Confidence            998

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=96.82  E-value=0.00097  Score=57.47  Aligned_cols=80  Identities=21%  Similarity=0.319  Sum_probs=62.6

Q ss_pred             hhcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC-ChhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN-SVQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~-~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .+.+.+.....||+|++|.|-+-.+ .+|+..|||++... ..+..+..++|+.+ ++....|-+|+++|........|+
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI  122 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI  122 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence            3444455568899999999977665 46899999999765 44555678888875 556688999999999888888898


Q ss_pred             EEe
Q 044262          396 IYE  398 (399)
Q Consensus       396 v~E  398 (399)
                      -||
T Consensus       123 cME  125 (282)
T KOG0984|consen  123 CME  125 (282)
T ss_pred             eHH
Confidence            887

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.81  E-value=0.00081  Score=66.84  Aligned_cols=78  Identities=23%  Similarity=0.250  Sum_probs=63.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChh---hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .-|...+.||-|+||.|-.+...+ ...+|.|.|++.+.-   .......|-.+|.+-+.+.||+|+-.+.+.+.+|.||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            347778999999999999876534 456899999775432   2335678889999999999999998888899999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       709 dY  710 (1034)
T KOG0608|consen  709 DY  710 (1034)
T ss_pred             ec
Confidence            98

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.81  E-value=0.0011  Score=58.35  Aligned_cols=76  Identities=22%  Similarity=0.385  Sum_probs=56.6

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC-CCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH-RNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+...++||.|+||.+|.|.. .+|+.||||.=....  ...++..|..+...|+| ..|.++.-+..+.+.-.||||.
T Consensus        15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL   92 (341)
T KOG1163|consen   15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL   92 (341)
T ss_pred             cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence            4577789999999999999985 569999999754332  22357888888888876 3555555566677777888874

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.70  E-value=0.0021  Score=65.68  Aligned_cols=38  Identities=32%  Similarity=0.628  Sum_probs=32.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKN  357 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~  357 (399)
                      ..++|...++||+|+||.||+|...+     +..||+|++...
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~  172 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEY  172 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEeccc
Confidence            45678889999999999999999854     578999998653

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=96.63  E-value=0.0014  Score=58.79  Aligned_cols=74  Identities=23%  Similarity=0.386  Sum_probs=56.6

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEe
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +....||.|..|.|+|..+.. |..+|||.+... .....+..+..+.++.+- ..|.||+.+|++......++-||
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            345789999999999999854 789999999775 444455677777766654 47999999999988766555444

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.51  E-value=0.0045  Score=61.17  Aligned_cols=31  Identities=32%  Similarity=0.509  Sum_probs=28.0

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN  357 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~  357 (399)
                      .+.||.|++|+||+|.+++|+.||||..+..
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            4679999999999999999999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.51  E-value=0.0012  Score=59.22  Aligned_cols=65  Identities=22%  Similarity=0.433  Sum_probs=51.6

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSF  388 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~  388 (399)
                      ++.+..||-|.||.||...-+ +|+.||.|++..-  +....+.+.+|+++|.-++|.|++.+++...
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQ  122 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQ  122 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcC
Confidence            345688999999999987764 4889999988542  3334567999999999999999999887653

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=96.48  E-value=0.0012  Score=59.31  Aligned_cols=78  Identities=17%  Similarity=0.286  Sum_probs=61.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------QGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT  391 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  391 (399)
                      ..+...+.||.|..+.|-+...+ .|...|+|++.....        ...+.-.+|+.+|+++ .||+|+.|.+++..+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            34566789999999998888765 478899999864311        1234567899999987 7999999999998888


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++|+|.
T Consensus        97 F~FlVFdl  104 (411)
T KOG0599|consen   97 FVFLVFDL  104 (411)
T ss_pred             hhhhhhhh
Confidence            88888873

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.26  E-value=0.019  Score=53.04  Aligned_cols=74  Identities=32%  Similarity=0.514  Sum_probs=59.9

Q ss_pred             CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChh---hHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHR-NLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |...+.||.|.||.||++...  ..+++|.+......   ....|.+|+.++..+.|+ +++++..........++++||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            345678999999999999986  77899998765222   366899999999999988 799999998666667888875

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=96.25  E-value=0.002  Score=61.74  Aligned_cols=77  Identities=27%  Similarity=0.346  Sum_probs=62.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|..-.+||+|+||.|+-.+... |...|.|.|.+..   .+...-.++|-.+|.+++.+-||.|--.+...+.++||+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            346777899999999999988754 8888998886542   223345788999999999999999987888888899987


Q ss_pred             e
Q 044262          398 E  398 (399)
Q Consensus       398 E  398 (399)
                      .
T Consensus       265 t  265 (591)
T KOG0986|consen  265 T  265 (591)
T ss_pred             E
Confidence            5

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.23  E-value=0.018  Score=50.72  Aligned_cols=69  Identities=20%  Similarity=0.199  Sum_probs=50.1

Q ss_pred             ccCcccccCceEEEEEEEcCCcEEEEEEecCCChh----hHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262          326 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ----GELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       326 ~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~----~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ....|++|.||.|+...- .+..++.+.+.....-    ...-|.+|+++|.+++ |+++.+++++    +..+++|||
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            457899999999995554 5677877777543221    1124789999999995 5789999876    346888886

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.19  E-value=0.0093  Score=56.54  Aligned_cols=77  Identities=23%  Similarity=0.350  Sum_probs=55.9

Q ss_pred             CCcccCcccccCceEEEEEEEcCC--cEEEEEEecCCChhhHHHHHHHHHHHhcCCC----CCccceeEEE-EeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHG--QEIAVKRLSKNSVQGELEFKNEVLLVARLQH----RNLVRLLGFS-FEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g--~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l  395 (399)
                      .|...++||+|+||.||++.-...  ..+|+|.-..........+..|+.++..+.+    +++.+++... ......+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            678889999999999999986443  4788887655422222257788888888763    4777777776 35667888


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||+.
T Consensus        99 VM~l  102 (322)
T KOG1164|consen   99 VMSL  102 (322)
T ss_pred             EEec
Confidence            8863

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.03  E-value=0.0046  Score=62.32  Aligned_cols=35  Identities=29%  Similarity=0.486  Sum_probs=29.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN  357 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~  357 (399)
                      ..|.. +.||.|++|+||++.+++ |+.||||.+++.
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            34554 789999999999999987 999999999754

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=95.89  E-value=0.0052  Score=59.92  Aligned_cols=75  Identities=24%  Similarity=0.357  Sum_probs=60.0

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC------CCCccceeEEEEeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ------HRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~------H~niv~l~g~~~~~~~~~l  395 (399)
                      .|......|+|-|+.|-++.-. .|..||||+|..+.. ..+.=+.|+++|.+|+      .-|.++|+-.+...++++|
T Consensus       433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl  511 (752)
T KOG0670|consen  433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL  511 (752)
T ss_pred             eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence            3555667899999999999753 478999999976543 2345678999999985      3488999988888999999


Q ss_pred             EEe
Q 044262          396 IYE  398 (399)
Q Consensus       396 v~E  398 (399)
                      |+|
T Consensus       512 VFE  514 (752)
T KOG0670|consen  512 VFE  514 (752)
T ss_pred             Eeh
Confidence            998

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.72  E-value=0.0044  Score=57.11  Aligned_cols=78  Identities=19%  Similarity=0.224  Sum_probs=60.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .+|....+||+|+|.+|....++. .+.+|+|.+++.   ........+.|-.++..- +||-+|.|..++.....++.|
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            467788999999999999988754 678999998764   333344456666555543 799999999998888889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      .||
T Consensus       330 iey  332 (593)
T KOG0695|consen  330 IEY  332 (593)
T ss_pred             EEE
Confidence            987

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=95.58  E-value=0.0018  Score=58.03  Aligned_cols=72  Identities=22%  Similarity=0.402  Sum_probs=56.1

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..+|.+..-|..|+|.++ |..+.+|+|...  .....++|..|...|+-+.||||+..+|.|..+..+.++..|
T Consensus       195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~  268 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY  268 (448)
T ss_pred             hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence            457788888999999994 555667777544  333345799999999999999999999999888777776554

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=95.56  E-value=0.0074  Score=56.64  Aligned_cols=77  Identities=17%  Similarity=0.241  Sum_probs=58.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCC------CccceeEEEEeCCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR------NLVRLLGFSFEGTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~------niv~l~g~~~~~~~~  393 (399)
                      +..|.+...+|+|.||.|-+..-.. +..||||+++.-. ...+..+-|++++.++.+.      -+|++.+++.-.+..
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            4567788999999999999887543 6889999986432 3345678899999998432      366777777777888


Q ss_pred             EEEEe
Q 044262          394 LLIYE  398 (399)
Q Consensus       394 ~lv~E  398 (399)
                      +||+|
T Consensus       167 Civfe  171 (415)
T KOG0671|consen  167 CIVFE  171 (415)
T ss_pred             EEEEe
Confidence            99988

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.24  E-value=0.021  Score=52.93  Aligned_cols=75  Identities=21%  Similarity=0.451  Sum_probs=48.3

Q ss_pred             CCCcccCcccccCceEEEEEE-EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      -+|...++||+|.||.++.|. +-+++.||||.=...+  ..-++..|-+..+.|. -++|-..+-+-.++..-.||+|
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            357778999999999999997 3468999999643322  2234556665555543 4566665433334444556655

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=95.05  E-value=0.013  Score=58.53  Aligned_cols=75  Identities=31%  Similarity=0.391  Sum_probs=58.4

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++.+.....+|+|+|+.|-.+... .++..+||++.+..    .+-.+|+.++.. -+|+||+++.+.+..+.+.++|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            345556677999999999988864 47788999997652    234566655444 479999999999999999999998


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      +
T Consensus       397 ~  397 (612)
T KOG0603|consen  397 L  397 (612)
T ss_pred             h
Confidence            4

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=94.71  E-value=0.01  Score=54.14  Aligned_cols=67  Identities=22%  Similarity=0.247  Sum_probs=51.7

Q ss_pred             CcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHH-HhcCCCCCccceeEEEEeC----CeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLL-VARLQHRNLVRLLGFSFEG----TERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~----~~~~lv~Ey  399 (399)
                      ++||-|-.|+|.....+. ++..|+|.|....     ...+|+++ +..-.|||||+++.++.+.    .-+++|||+
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~  140 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMEC  140 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeec
Confidence            789999999999888754 7889999986543     45677875 3344799999999988653    447889985

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=94.67  E-value=0.048  Score=44.53  Aligned_cols=30  Identities=30%  Similarity=0.299  Sum_probs=15.9

Q ss_pred             ceEEEeehHHHHHHHHHHHHHhhhhhheec
Q 044262          264 GTVIIIVVSTSIFIIALVALVTCVFLRRRK  293 (399)
Q Consensus       264 ~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r  293 (399)
                      .+++.++|++.++++++++++++++++|+|
T Consensus        49 nIVIGvVVGVGg~ill~il~lvf~~c~r~k   78 (154)
T PF04478_consen   49 NIVIGVVVGVGGPILLGILALVFIFCIRRK   78 (154)
T ss_pred             cEEEEEEecccHHHHHHHHHhheeEEEecc
Confidence            467777777665555444444344433333

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.48  E-value=0.08  Score=46.67  Aligned_cols=72  Identities=13%  Similarity=0.218  Sum_probs=52.8

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCC--CccceeEEEEeCC---eEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHR--NLVRLLGFSFEGT---ERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~~~---~~~lv~Ey  399 (399)
                      +.|+.|..+.+|+....+|..+++|....... .....+..|.+++..+++.  ++.+++.+.....   ..++||||
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            56899999999999987668899998754322 1345788999999988764  4566777665432   45789886

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=94.26  E-value=0.14  Score=46.22  Aligned_cols=72  Identities=15%  Similarity=0.137  Sum_probs=49.9

Q ss_pred             cCccc-ccCceEEEEEEEcCCcEEEEEEecCCC-------------hhhHHHHHHHHHHHhcCCCCCc--cceeEEEEeC
Q 044262          327 DNKLG-QGGFGAVYKGRLSHGQEIAVKRLSKNS-------------VQGELEFKNEVLLVARLQHRNL--VRLLGFSFEG  390 (399)
Q Consensus       327 ~~~iG-~G~fG~Vykg~~~~g~~vavK~l~~~~-------------~~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~  390 (399)
                      ..+|| .|+.|.||+... .+..++||.+....             ......+.+|+.++..++|+++  .+.+++....
T Consensus        36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            45787 888999998887 46788998875321             1122457889999999998875  6777764432


Q ss_pred             Ce----EEEEEeC
Q 044262          391 TE----RLLIYEF  399 (399)
Q Consensus       391 ~~----~~lv~Ey  399 (399)
                      ..    .+||+||
T Consensus       115 ~~~~~~~~lV~e~  127 (239)
T PRK01723        115 HGLFYRADILIER  127 (239)
T ss_pred             cCcceeeeEEEEe
Confidence            21    2488875

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=93.84  E-value=0.031  Score=50.38  Aligned_cols=77  Identities=18%  Similarity=0.417  Sum_probs=54.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEE-eCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSF-EGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~-~~~~~~lv~E  398 (399)
                      +.|.+.+.||+|.||.+..++.+. .+.+++|.+.... ....+|.+|-----.| .|.||+.-+.+.. ..+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            346677999999999999999865 5678999886543 3356899987533334 5889998765433 3455666777


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       103 ~  103 (378)
T KOG1345|consen  103 F  103 (378)
T ss_pred             c
Confidence            5

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=93.18  E-value=0.037  Score=44.15  Aligned_cols=31  Identities=29%  Similarity=0.432  Sum_probs=28.1

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN  357 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~  357 (399)
                      .+.|+.|+.|+||+|.+++|+.||||..+..
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcchH
Confidence            4689999999999999999999999998664

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=93.18  E-value=0.17  Score=42.58  Aligned_cols=68  Identities=18%  Similarity=0.165  Sum_probs=47.1

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCcc-ceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV-RLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|+.|.++.||+.... +..+++|....... ....+..|...+..+.+.+++ ++++..  ....++||||
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~   72 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEF   72 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEe
Confidence            56889999999998874 77899998754421 223567888888888665554 444432  3345788886

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=92.92  E-value=0.043  Score=58.54  Aligned_cols=76  Identities=21%  Similarity=0.384  Sum_probs=46.4

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .+.|.+...||+|+||+||+|.-.+|+.||+|.-+....-   +|--=.+++.+|+   -+-|+++..+..-.+.-+||+
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~  773 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS  773 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence            3456778999999999999999888999999987654321   2222223333333   122333333333345556666


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       774 ey  775 (974)
T KOG1166|consen  774 EY  775 (974)
T ss_pred             ec
Confidence            65

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=92.28  E-value=0.012  Score=57.39  Aligned_cols=77  Identities=21%  Similarity=0.261  Sum_probs=59.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcCC-cEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHG-QEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++.....||-|+||.|=....+.. ...|+|.+++.   .....+....|-.+|-+.+.+.||+|+--+.+....|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            3455567899999999988777543 34788888764   3444567889999999999999999988777777777776


Q ss_pred             e
Q 044262          398 E  398 (399)
Q Consensus       398 E  398 (399)
                      |
T Consensus       500 E  500 (732)
T KOG0614|consen  500 E  500 (732)
T ss_pred             H
Confidence            6

>PF15102 TMEM154: TMEM154 protein family

Probab=92.07  E-value=0.53  Score=38.34  Aligned_cols=15  Identities=7%  Similarity=0.514  Sum_probs=7.7

Q ss_pred             ceEEEeehHHHHHHH
Q 044262          264 GTVIIIVVSTSIFII  278 (399)
Q Consensus       264 ~~ii~ivv~~~~~~l  278 (399)
                      ..+++++++.+++++
T Consensus        56 efiLmIlIP~VLLvl   70 (146)
T PF15102_consen   56 EFILMILIPLVLLVL   70 (146)
T ss_pred             ceEEEEeHHHHHHHH
Confidence            346666666444433

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=92.03  E-value=0.064  Score=42.54  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=15.7

Q ss_pred             ceEEEeehHHHHHHHHHHHHHhhhhhheecc
Q 044262          264 GTVIIIVVSTSIFIIALVALVTCVFLRRRKQ  294 (399)
Q Consensus       264 ~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~  294 (399)
                      ..+++|++++++.++.++++++++++|++|+
T Consensus        64 ~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   64 PAIIGIIFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             cceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3455566666655555555554555444443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=91.94  E-value=0.27  Score=41.88  Aligned_cols=55  Identities=22%  Similarity=0.378  Sum_probs=41.6

Q ss_pred             cccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccc
Q 044262          325 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR  382 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~  382 (399)
                      ...+.|++|.+|.||.|.+ .|..+|+|.-...+  ....+..|.+++..+.-.++..
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p   79 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTP   79 (201)
T ss_pred             hhhhhhhcccccEEEEeec-cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCc
Confidence            3457899999999999999 45688998765433  3457889999888877655543

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=91.37  E-value=0.23  Score=37.85  Aligned_cols=32  Identities=25%  Similarity=0.359  Sum_probs=17.6

Q ss_pred             ccCceEEEeehHHHHHHHHHHHHHhhhhhhee
Q 044262          261 ISSGTVIIIVVSTSIFIIALVALVTCVFLRRR  292 (399)
Q Consensus       261 ~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~  292 (399)
                      .+...+..+++++++++.+++.++.||+.+|+
T Consensus        63 ls~gaiagi~vg~~~~v~~lv~~l~w~f~~r~   94 (96)
T PTZ00382         63 LSTGAIAGISVAVVAVVGGLVGFLCWWFVCRG   94 (96)
T ss_pred             cccccEEEEEeehhhHHHHHHHHHhheeEEee
Confidence            34456777777666555555545445544443

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=91.23  E-value=0.29  Score=49.68  Aligned_cols=55  Identities=20%  Similarity=0.189  Sum_probs=44.3

Q ss_pred             cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          344 SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       344 ~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .++.+|.|...+...........+-++.|+.++||||++++........+|||+|
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE   89 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE   89 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence            3578888888876655333446677788999999999999999888889999988

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=88.90  E-value=0.098  Score=51.39  Aligned_cols=71  Identities=27%  Similarity=0.461  Sum_probs=56.1

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCC-cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHG-QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      ...+|.....+|.|+||.|+.+....+ -..|||+|... ........++|+..+.++-|++++++.-.+..+
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER  119 (516)
T ss_pred             hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence            346788889999999999999887654 47899998654 334455688899999999999999988766554

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=87.17  E-value=0.17  Score=46.83  Aligned_cols=74  Identities=23%  Similarity=0.302  Sum_probs=49.0

Q ss_pred             cccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeEEE
Q 044262          325 STDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TERLL  395 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l  395 (399)
                      .....+|.|.= .|-.+.- -.++.|++|++...  .....+...+|..+|..+.|+||++++.++...      .+.++
T Consensus        20 ~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~   98 (369)
T KOG0665|consen   20 VNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYL   98 (369)
T ss_pred             eeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHH
Confidence            33455566654 2322221 13678999987543  233455678999999999999999999988653      23577


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        99 v~e~  102 (369)
T KOG0665|consen   99 VMEL  102 (369)
T ss_pred             HHHh
Confidence            7765

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=85.36  E-value=0.45  Score=49.38  Aligned_cols=32  Identities=28%  Similarity=0.535  Sum_probs=25.8

Q ss_pred             cChhhHHhhcCCCcccCcccccCceEEEEEEEc
Q 044262          312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS  344 (399)
Q Consensus       312 ~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~  344 (399)
                      +-.++++..++ +...+.||+|+||.||.|.-+
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence            44567777776 788899999999999998753

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=84.18  E-value=1.4  Score=43.86  Aligned_cols=64  Identities=22%  Similarity=0.282  Sum_probs=45.9

Q ss_pred             eEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEEEEeC
Q 044262          336 GAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLLIYEF  399 (399)
Q Consensus       336 G~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey  399 (399)
                      -..||+..+ +|..+..|+++....+....-..-++.++++.|.|+|+|..++..    ...+.|||+|
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDY  358 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDY  358 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEec
Confidence            456788764 588899999954433333234455678899999999999988763    3457889887

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=83.31  E-value=1.2  Score=44.91  Aligned_cols=31  Identities=23%  Similarity=0.341  Sum_probs=28.3

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN  357 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~  357 (399)
                      .+.|+.++-|+||+|++++|+.||||.+++.
T Consensus       130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             CCchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence            3789999999999999999999999999765

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=83.19  E-value=2.7  Score=36.84  Aligned_cols=66  Identities=24%  Similarity=0.308  Sum_probs=48.2

Q ss_pred             CCCcccCcccccCc-eEEEEEEEcCCcEEEEEEecCC---C---------h---------hhHHHHHHHHHHHhcC---C
Q 044262          322 NNFSTDNKLGQGGF-GAVYKGRLSHGQEIAVKRLSKN---S---------V---------QGELEFKNEVLLVARL---Q  376 (399)
Q Consensus       322 ~~~~~~~~iG~G~f-G~Vykg~~~~g~~vavK~l~~~---~---------~---------~~~~~f~~E~~~l~~l---~  376 (399)
                      ..|+..+.||.|.- |.|||..+ +|..+|+|.....   .         .         .....|..|.+...+|   .
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            45667789999999 99999999 6789999993221   0         0         1123588899877766   4


Q ss_pred             CCCc--cceeEEEE
Q 044262          377 HRNL--VRLLGFSF  388 (399)
Q Consensus       377 H~ni--v~l~g~~~  388 (399)
                      +.++  |+..|+..
T Consensus       116 ~e~~~Avkc~Gyl~  129 (207)
T PF13095_consen  116 REGLWAVKCHGYLL  129 (207)
T ss_pred             ccCceEEEeeEEEE
Confidence            5566  88888874

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=81.65  E-value=0.45  Score=46.84  Aligned_cols=12  Identities=25%  Similarity=0.669  Sum_probs=6.5

Q ss_pred             eccCCCCChHhH
Q 044262          180 MQCTPDISQSDC  191 (399)
Q Consensus       180 ~qC~~dl~~~~C  191 (399)
                      ..|.++-.+.+|
T Consensus       239 ~~C~~~~~~~~C  250 (439)
T PF02480_consen  239 ANCSPSGWPRRC  250 (439)
T ss_dssp             EEEBTTC-TTTT
T ss_pred             cCCCCCCCcCCC
Confidence            556666555555

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=81.56  E-value=7.1  Score=34.13  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=50.9

Q ss_pred             cccCcccccCceEEEEEEEcCCcEEEEEEecCCC----------------hhhHHHHHHHHHHHhcCC------CCCccc
Q 044262          325 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS----------------VQGELEFKNEVLLVARLQ------HRNLVR  382 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~----------------~~~~~~f~~E~~~l~~l~------H~niv~  382 (399)
                      .....||+|+.-.+|.-  ++.....||.+....                ....+++.+|+.-...+.      +.+|.+
T Consensus         4 ~~~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCCcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            34578999999999953  445567788776544                122346677765544443      789999


Q ss_pred             eeEEEEeCCeEEEEEe
Q 044262          383 LLGFSFEGTERLLIYE  398 (399)
Q Consensus       383 l~g~~~~~~~~~lv~E  398 (399)
                      ++|+......+-+|+|
T Consensus        82 ~~G~veT~~G~Glv~e   97 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVE   97 (199)
T ss_pred             EeEEEecCCceEEEEE
Confidence            9999988877888877

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	399
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-19
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-18
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-11
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-10
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-10
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-08
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		5e-08
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-07
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-07
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-07
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-07
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-07
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-07
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-07
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-07
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-07
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-07
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-06
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		8e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		5e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		6e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		6e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		6e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		6e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Query: 291 RRKQKQD------LTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS 344
           RRK+ QD        +  E++  +  +F    ++ A++NFS  N LG+GGFG VYKGRL+
Sbjct: 1   RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 345 HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
            G  +AVKRL +   Q GEL+F+ EV +++   HRNL+RL GF    TERLL+Y +
Sbjct: 61  DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 303 EINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ-G 361
           E++  +  +F    ++ A++NF   N LG+GGFG VYKGRL+ G  +AVKRL +   Q G
Sbjct: 11  EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 362 ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           EL+F+ EV +++   HRNL+RL GF    TERLL+Y +
Sbjct: 71  ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 300 KADEINTVESLQFDFSTIRDATNNFST------DNKLGQGGFGAVYKGRLSHGQEIAVKR 353
           K+ E++      F F  +++ TNNF         NK+G+GGFG VYKG +++   +AVK+
Sbjct: 3   KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKK 61
Query: 354 LSK----NSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           L+      + + + +F  E+ ++A+ QH NLV LLGFS +G +  L+Y +
Sbjct: 62  LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 300 KADEINTVESLQFDFSTIRDATNNFST------DNKLGQGGFGAVYKGRLSHGQEIAVKR 353
           K+ E++      F F  +++ TNNF         NK+G+GGFG VYKG +++   +AVK+
Sbjct: 3   KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKK 61
Query: 354 LSK----NSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           L+      + + + +F  E+ ++A+ QH NLV LLGFS +G +  L+Y +
Sbjct: 62  LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 11/98 (11%)
Query: 312 FDFSTIRDATNNFST------DNKLGQGGFGAVYKGRLSHGQEIAVKRLSK----NSVQG 361
           F F  +++ TNNF         NK+G+GGFG VYKG +++   +AVK+L+      + + 
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 362 ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           + +F  E+ ++A+ QH NLV LLGFS +G +  L+Y +
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 105

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 312 FDFSTIRDATNNFST------DNKLGQGGFGAVYKGRLSHGQEIAVKRLSK----NSVQG 361
           F F  +++ TNNF         NK G+GGFG VYKG +++   +AVK+L+      + + 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 362 ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           + +F  E+ + A+ QH NLV LLGFS +G +  L+Y +
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVY 102

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%)
Query: 308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKN 367
           ES +     + +ATNNF     +G G FG VYKG L  G ++A+KR +  S QG  EF+ 
Sbjct: 25  ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 368 EVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           E+  ++  +H +LV L+GF  E  E +LIY++
Sbjct: 85  EIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%)
Query: 308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKN 367
           ES +     + +ATNNF     +G G FG VYKG L  G ++A+KR +  S QG  EF+ 
Sbjct: 25  ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 368 EVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           E+  ++  +H +LV L+GF  E  E +LIY++
Sbjct: 85  EIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++L
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLEL 115

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++L
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLEL 129

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILMEL 114

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVAR 374
            N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++
Sbjct: 47  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
             H+N+VR +G S +   R ++ E 
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLEL 131

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLEL 115

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLEL 115

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILLEL 114

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMEL 129

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSK-NSVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLEL 129

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 38  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 98  NHQNIVRCIGVSLQSLPRFILLEL 121

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 72  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLEL 155

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL 375
           N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++ 
Sbjct: 23  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H+N+VR +G S +   R ++ E 
Sbjct: 83  NHQNIVRCIGVSLQSLPRFILLEL 106

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVAR 374
            N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++
Sbjct: 48  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
             H+N+VR +G S +   R ++ E 
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLEL 132

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVAR 374
            N +    LG G FG VY+G++S         ++AVK L +  S Q EL+F  E L++++
Sbjct: 57  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
             H+N+VR +G S +   R ++ E 
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLEL 141

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQE-IAVKRLSKNSVQGEL-------EFKNEVLL 371
           A N    + ++G+GGFG V+KGRL   +  +A+K L     +GE        EF+ EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 372 VARLQHRNLVRLLGF 386
           ++ L H N+V+L G 
Sbjct: 77  MSNLNHPNIVKLYGL 91

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQE-IAVKRLSKNSVQGEL-------EFKNEVLL 371
           A N    + ++G+GGFG V+KGRL   +  +A+K L     +GE        EF+ EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 372 VARLQHRNLVRLLGF 386
           ++ L H N+V+L G 
Sbjct: 77  MSNLNHPNIVKLYGL 91

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQE-IAVKRLSKNSVQGEL-------EFKNEVLL 371
           A N    + ++G+GGFG V+KGRL   +  +A+K L     +GE        EF+ EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 372 VARLQHRNLVRLLGF 386
           ++ L H N+V+L G 
Sbjct: 77  MSNLNHPNIVKLYGL 91

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRN 379
            +LG+  FG VYKG L         Q +A+K L K+  +G L  EF++E +L ARLQH N
Sbjct: 32  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPN 90
Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V LLG   +     +I+ +
Sbjct: 91  VVCLLGVVTKDQPLSMIFSY 110

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRN 379
            +LG+  FG VYKG L         Q +A+K L K+  +G L  EF++E +L ARLQH N
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V LLG   +     +I+ +
Sbjct: 74  VVCLLGVVTKDQPLSMIFSY 93

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 303 EINTVESLQFDFSTIRDATN----NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS 358
           +I T E+L F  +   D  +    + +   K+G G FG V++    HG ++AVK L +  
Sbjct: 14  DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD 72
Query: 359 VQGEL--EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
              E   EF  EV ++ RL+H N+V  +G   +     ++ E+
Sbjct: 73  FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 303 EINTVESLQFDFSTIRDATN----NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS 358
           +I T E+L F  +   D  +    + +   K+G G FG V++    HG ++AVK L +  
Sbjct: 14  DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD 72
Query: 359 VQGEL--EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
              E   EF  EV ++ RL+H N+V  +G   +     ++ E+
Sbjct: 73  FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 330 LGQGGFGAVYKG-RLSHGQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRL 383
           LG G FG VYKG  +  G+     +A+K L++ +  +  +EF +E L++A + H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 384 LGFSFEGTERLL 395
           LG     T +L+
Sbjct: 83  LGVCLSPTIQLV 94

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 330 LGQGGFGAVYKG-RLSHGQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRL 383
           LG G FG VYKG  +  G+     +A+K L++ +  +  +EF +E L++A + H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 384 LGFSFEGTERLL 395
           LG     T +L+
Sbjct: 106 LGVCLSPTIQLV 117

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            + +  +KLG G FG VY+G    +   +AVK L +++++ E EF  E  ++  ++H NL
Sbjct: 11  TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 69
Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG         +I EF
Sbjct: 70  VQLLGVCTREPPFYIITEF 88

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 78  QLLGVCTREPPFYIIIEF 95

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NL
Sbjct: 11  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 69
Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG         +I EF
Sbjct: 70  VQLLGVCTREPPFYIIIEF 88

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 78  QLLGVCTREPPFYIITEF 95

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 73
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 74  QLLGVCTREPPFYIIIEF 91

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 73  QLLGVCTREPPFYIIIEF 90

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 73  QLLGVCTREPPFYIITEF 90

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 76
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 77  QLLGVCTREPPFYIITEF 94

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 78  QLLGVCTREPPFYIITEF 95

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 73  QLLGVCTREPPFYIIIEF 90

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 308 ESLQFDFSTIRDATNNFSTD----NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGE 362
           E+L F  S   D      TD    +KLG G +G VY+G    +   +AVK L +++++ E
Sbjct: 8   ENLYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 67
Query: 363 LEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
            EF  E  ++  ++H NLV+LLG         +I EF
Sbjct: 68  -EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 103

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 78  QLLGVCTREPPFYIITEF 95

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 73  QLLGVCTREPPFYIITEF 90

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 73
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 74  QLLGVCTREPPFYIITEF 91

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 78  QLLGVCTREPPFYIITEF 95

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 75  QLLGVCTREPPFYIITEF 92

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 73  QLLGVCTREPPFYIITEF 90

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 75  QLLGVCTREPPFYIITEF 92

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 329 KLGQGGFGAVYKGR---LSHGQE---IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
           +LG+G FG V+      L   Q+   +AVK L + S     +F+ E  L+  LQH+++VR
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 383 LLGFSFEGTERLLIYEF 399
             G   EG   L+++E+
Sbjct: 85  FFGVCTEGRPLLMVFEY 101

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 73  QLLGVCTREPPFYIITEF 90

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 329 KLGQGGFGAVYKGR---LSHGQE---IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
           +LG+G FG V+      L   Q+   +AVK L + S     +F+ E  L+  LQH+++VR
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 383 LLGFSFEGTERLLIYEF 399
             G   EG   L+++E+
Sbjct: 79  FFGVCTEGRPLLMVFEY 95

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NL
Sbjct: 11  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 69
Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG         +I EF
Sbjct: 70  VQLLGVCTREPPFYIITEF 88

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 75  QLLGVCTREPPFYIITEF 92

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 329 KLGQGGFGAVYKGR---LSHGQE---IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
           +LG+G FG V+      L   Q+   +AVK L + S     +F+ E  L+  LQH+++VR
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 383 LLGFSFEGTERLLIYEF 399
             G   EG   L+++E+
Sbjct: 108 FFGVCTEGRPLLMVFEY 124

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 279
Query: 382 RLLGFSFEGTERLLIYEF 399
           +LLG         +I EF
Sbjct: 280 QLLGVCTREPPFYIITEF 297

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELE 364
           TV  +  ++        + +  +KLG G +G VY+G    +   +AVK L +++++ E E
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 301
Query: 365 FKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           F  E  ++  ++H NLV+LLG         +I EF
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 336

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RDA +++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 13  RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 70
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 71  VGVLRKTRHVNILLFMGYS 89

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 322 NNFSTDNKLGQGGFGAVYKGR---LSHGQE---IAVKRLSKNSVQGELEFKNEVLLVARL 375
           +N     +LG+G FG V+      L   Q+   +AVK L   S     +F  E  L+  L
Sbjct: 13  HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
           QH ++V+  G   EG   ++++E+
Sbjct: 73  QHEHIVKFYGVCVEGDPLIMVFEY 96

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEI--AVKRLSKNSVQGELEF 365
           E+L F  ST  D    ++ +N +G+G +G V K  +  G  I  A K++ K  V+    F
Sbjct: 12  ENLYFQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRF 70
Query: 366 KNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           K E+ ++  L H N++RL     + T+  L+ E 
Sbjct: 71  KQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 104

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            + +  +KLG G +G VY G    +   +AVK L +++++ E EF  E  ++  ++H NL
Sbjct: 32  TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 90
Query: 381 VRLLG 385
           V+LLG
Sbjct: 91  VQLLG 95

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RD+++++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 1   RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 58
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 59  VGVLRKTRHVNILLFMGYS 77

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RD+++++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 25  RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 82
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 83  VGVLRKTRHVNILLFMGYS 101

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNEVLLVARLQHRNL 380
             +   ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNEV ++ + +H N+
Sbjct: 14  QITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 381 VRLLGFS 387
           +  +G+S
Sbjct: 72  LLFMGYS 78

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNEVLLVARLQHRNL 380
             +   ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNEV ++ + +H N+
Sbjct: 9   QITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 381 VRLLGFS 387
           +  +G+S
Sbjct: 67  LLFMGYS 73

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RD+++++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 24  RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 81
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 82  VGVLRKTRHVNILLFMGYS 100

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RD+++++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 17  RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 74
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 75  VGVLRKTRHVNILLFMGYS 93

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNEVLLVARLQHRNL 380
             +   ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNEV ++ + +H N+
Sbjct: 9   QITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 381 VRLLGFS 387
           +  +G+S
Sbjct: 67  LLFMGYS 73

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RD+++++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 25  RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 82
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 83  VGVLRKTRHVNILLFMGYS 101

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 318 RDATNNFSTDN-------KLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNE 368
           RD+++++   +       ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNE
Sbjct: 13  RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNE 70
Query: 369 VLLVARLQHRNLVRLLGFS 387
           V ++ + +H N++  +G+S
Sbjct: 71  VGVLRKTRHVNILLFMGYS 89

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNEVLLVARLQHRNL 380
             +   ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNEV ++ + +H N+
Sbjct: 9   QITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 381 VRLLGFS 387
           +  +G+S
Sbjct: 67  LLFMGYS 73

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNEVLLVARLQHRNL 380
             +   ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNEV ++ + +H N+
Sbjct: 11  QITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 381 VRLLGFS 387
           +  +G+S
Sbjct: 69  LLFMGYS 75

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL--SKNSVQGELEFKNEVLLVARLQHRNL 380
             +   ++G G FG VYKG+  HG ++AVK L  +  + Q    FKNEV ++ + +H N+
Sbjct: 14  QITVGQRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 381 VRLLGFS 387
           +  +G+S
Sbjct: 72  LLFMGYS 78

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	399
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	8e-44
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-43
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-42
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	2e-24
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	4e-23
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-23
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-20
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-13
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-13
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-13
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-12
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-11
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-11
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-09
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-09
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	9e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-07
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	6e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	8e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	5e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	8e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	9e-05
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	5e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  154 bits (391), Expect = 8e-44
 Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)

Query: 312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQG-ELEFKNEVL 370
           F    ++ A++NFS  N LG+GGFG VYKGRL+ G  +AVKRL +   QG EL+F+ EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 371 LVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           +++   HRNL+RL GF    TERLL+Y +
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPY 108

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  151 bits (384), Expect = 7e-43
 Identities = 38/110 (34%), Positives = 59/110 (53%)

Query: 290 RRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEI 349
           +      D   +  +   ES +     + +ATNNF     +G G FG VYKG L  G ++
Sbjct: 7   KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66

Query: 350 AVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           A+KR +  S QG  EF+ E+  ++  +H +LV L+GF  E  E +LIY++
Sbjct: 67  ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  150 bits (381), Expect = 1e-42
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 11/107 (10%)

Query: 303 EINTVESLQFDFSTIRDATNNFS------TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSK 356
           E++      F F  +++ TNNF         NK+G+GGFG VYKG ++    +AVK+L+ 
Sbjct: 6   EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAA 64

Query: 357 ----NSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
                + + + +F  E+ ++A+ QH NLV LLGFS +G +  L+Y +
Sbjct: 65  MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 99.0 bits (247), Expect = 1e-23
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 305 NTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELE 364
           +    +      +   +          +G FG V+K +L   + +AVK       Q   +
Sbjct: 7   HHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSW-Q 64

Query: 365 FKNEVLLVARLQHRNLVRLLGFSFEG----TERLLIYEF 399
            + EV  +  ++H N+++ +G    G     +  LI  F
Sbjct: 65  NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 90.7 bits (225), Expect = 2e-20
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 310 LQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNE- 368
           ++   S      +N      +G+G +GAVYKG L   + +AVK  S  + Q    F NE 
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEK 56

Query: 369 -VLLVARLQHRNLVRLLGFSFEG-----TERLLIYEF 399
            +  V  ++H N+ R +            E LL+ E+
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 294 QKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKR 353
              D+   + +    ++  D   I     + +   K+G G FG V++    HG ++AVK 
Sbjct: 11  SDYDIPTTENLYFQGAMDGDDMDIP--WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKI 67

Query: 354 LSKNSVQGEL--EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           L +     E   EF  EV ++ RL+H N+V  +G   +     ++ E+
Sbjct: 68  LMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 8/70 (11%)

Query: 328 NKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL-------EFKNEVLLVARLQHRN 379
            ++G+GGFG V+KGR +     +A+K L     +GE        EF+ EV +++ L H N
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 380 LVRLLGFSFE 389
           +V+L G    
Sbjct: 85  IVKLYGLMHN 94

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRNLVRLLG 385
            KL +   G ++KGR   G +I VK L           +F  E   +    H N++ +LG
Sbjct: 16  TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRL----SKNSVQGELEFKNEVLLVARLQHRNLVRL 383
             +G GGFG VY+     G E+AVK       ++  Q     + E  L A L+H N++ L
Sbjct: 13  EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71

Query: 384 LGFSFEGTERLLIYEF 399
            G   +     L+ EF
Sbjct: 72  RGVCLKEPNLCLVMEF 87

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 67.4 bits (165), Expect = 9e-13
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
                +  +G+G FG V K +    +++A+K++   S +    F  E+  ++R+ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIV 64

Query: 382 RLLGFSFE 389
           +L G    
Sbjct: 65  KLYGACLN 72

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--------SHGQEIAVKRLSKNSVQGELEFKNEVLLVA 373
            +   +  LGQG F  ++KG           H  E+ +K L K        F     +++
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 374 RLQHRNLVRLLGFSFEGTERLLIYEF 399
           +L H++LV   G    G E +L+ EF
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEF 93

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
            +LG+G FG V+               +AVK L   ++    +F+ E  L+  LQH ++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 382 RLLGFSFEGTERLLIYEF 399
           +  G   +G   ++++E+
Sbjct: 81  KFYGVCGDGDPLIMVFEY 98

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 4/60 (6%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRNLVRLLG 385
            ++G G FG VYKG+  HG ++AVK L+  +   +    FKNEV ++ + +H N++  +G
Sbjct: 30  QRIGSGSFGTVYKGKW-HG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 65.8 bits (161), Expect = 4e-12
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 328 NKLGQGGFGAVYKGRLSHGQE------IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
            +LG+G FG V+     +         +AVK L + S     +F+ E  L+  LQH+++V
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 382 RLLGFSFEGTERLLIYEF 399
           R  G   EG   L+++E+
Sbjct: 107 RFFGVCTEGRPLLMVFEY 124

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 328 NKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
             LG+G FG   K      G+ + +K L +   + +  F  EV ++  L+H N+++ +G
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 65.5 bits (160), Expect = 5e-12
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRNLVRLLG 385
             +G+G FG VY GR  HG E+A++ +       +    FK EV+   + +H N+V  +G
Sbjct: 39  ELIGKGRFGQVYHGRW-HG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 65.0 bits (159), Expect = 7e-12
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNL 380
             LG G FG VY+G++          ++AVK L +  S Q EL+F  E L++++  H+N+
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95

Query: 381 VRLLGFSFEGTERLLIYEF 399
           VR +G S +   R ++ E 
Sbjct: 96  VRCIGVSLQSLPRFILMEL 114

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNL 380
             LG G FG VY+G++          ++AVK L +  S Q EL+F  E L++++  H+N+
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136

Query: 381 VRLLGFSFEGTERLLIYEF 399
           VR +G S +   R ++ E 
Sbjct: 137 VRCIGVSLQSLPRFILLEL 155

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHG------QEIAVKRLSKNSVQGEL-EFKNEVLLVAR 374
            N      LG+G FG V K    H         +AVK L +N+   EL +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
           + H ++++L G   +    LLI E+
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEY 107

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 5/95 (5%)

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL-- 363
            + +    F ++      +S   ++G GG   V++      Q  A+K ++      +   
Sbjct: 12  DLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD 71

Query: 364 EFKNEVLLVARLQHRNL--VRLLGFSFEGTERLLI 396
            ++NE+  + +LQ  +   +RL  +     + + +
Sbjct: 72  SYRNEIAYLNKLQQHSDKIIRLYDY-EITDQYIYM 105

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           +  +   ++G G FG V+ G   +  ++A+K + +     E +F  E  ++ +L H  LV
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66

Query: 382 RLLGFSFEGTERLLIYEF 399
           +L G   E     L+ EF
Sbjct: 67  QLYGVCLEQAPICLVTEF 84

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNL 380
             +G+G FG V++ R            +AVK L + +      +F+ E  L+A   + N+
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG    G    L++E+
Sbjct: 113 VKLLGVCAVGKPMCLLFEY 131

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 290 RRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQE 348
           + ++   +    + +   E L+      R+  +  +   ++G+G FG V++ +    G +
Sbjct: 26  KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQ 85

Query: 349 IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY-EF 399
            AVK++     +       E++  A L    +V L G   EG   + I+ E 
Sbjct: 86  CAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREG-PWVNIFMEL 131

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRLSHGQE------IAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNL 380
            +LGQG FG VY+G      +      +A+K +++ +   E  EF NE  ++      ++
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 381 VRLLGFSFEGTERLLIYEF 399
           VRLLG   +G   L+I E 
Sbjct: 91  VRLLGVVSQGQPTLVIMEL 109

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
            + +   +LG G FG V  G+     ++A+K + + S+  + EF  E  ++  L H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLV 82

Query: 382 RLLGFSFEGTERLLIYEF 399
           +L G   +     +I E+
Sbjct: 83  QLYGVCTKQRPIFIITEY 100

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRL------SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNL 380
            +LG+  FG VYKG L         Q +A+K L          EF++E +L ARLQH N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V LLG   +     +I+ +
Sbjct: 75  VCLLGVVTKDQPLSMIFSY 93

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRN 379
            +     ++G+G FG V+ GRL +    +AVK   +      + +F  E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +VRL+G   +     ++ E 
Sbjct: 174 IVRLIGVCTQKQPIYIVMEL 193

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 61.6 bits (150), Expect = 9e-11
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNE--VLLVARLQHRNLVRLLG 385
             +G+G +G V++G    G+ +AVK  S    + E  +  E  +     L+H N++  + 
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 386 ----FSFEGTERLLIYEF 399
                    T+  LI  +
Sbjct: 70  SDMTSRHSSTQLWLITHY 87

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 61.7 bits (150), Expect = 9e-11
 Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNE--VLLVARLQHRNLVRLL 384
             ++G+G +G V+ G+   G+++AVK         E  +  E  +     ++H N++  +
Sbjct: 42  VKQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFI 97

Query: 385 GFSFEG----TERLLIYEF 399
               +G    T+  LI ++
Sbjct: 98  AADIKGTGSWTQLYLITDY 116

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 61.6 bits (150), Expect = 9e-11
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 11/103 (10%)

Query: 308 ESLQFDFSTIRDAT----NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNS 358
                     +D T     +    ++LG+G FG+V   R      + G  +AVK+L  + 
Sbjct: 5   HHHHAQLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG 64

Query: 359 VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER--LLIYEF 399
              + +F+ E+ ++  L    +V+  G S+    +   L+ E+
Sbjct: 65  PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
              +   +LG G FG V  G+     ++AVK + + S+  + EF  E   + +L H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLV 66

Query: 382 RLLGFSFEGTERLLIYEF 399
           +  G   +     ++ E+
Sbjct: 67  KFYGVCSKEYPIYIVTEY 84

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 10/79 (12%)

Query: 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNE--VLLVARLQHRNLVRLL 384
              +G+G FG V++G+   G+E+AVK  S    + E  +  E  +     L+H N++  +
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFI 102

Query: 385 G----FSFEGTERLLIYEF 399
                 +   T+  L+ ++
Sbjct: 103 AADNKDNGTWTQLWLVSDY 121

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRN 379
             +S   ++G GG   V++      Q  A+K ++      +    ++NE+  + +LQ  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 380 L--VRLLGFSFEGTERLLIY 397
              +RL  +     + + + 
Sbjct: 69  DKIIRLYDY-EITDQYIYMV 87

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 60.9 bits (148), Expect = 3e-10
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 309 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE--LEF 365
           S + +          ++    LG+G FG V K +     QE AVK ++K S + +     
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 366 KNEVLLVARLQHRNLVRLLGFSFE 389
             EV L+ +L H N+++L     E
Sbjct: 69  LREVELLKKLDHPNIMKLFEI-LE 91

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 17/171 (9%)

Query: 239 SPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDL 298
           SP+ P          +     +  +  +++   S  +  I  +  ++    ++   +   
Sbjct: 2   SPIDPMGHHHHHHGRR----RASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLY 57

Query: 299 TKADEINTVESLQFD---FSTIRDATNNFSTDN-----KLGQGGFGAVYKGRLSHG---- 346
            +      ++    +      ++      S+        +G+G FG VY G L       
Sbjct: 58  FQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKK 117

Query: 347 QEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396
              AVK L++ +  GE+ +F  E +++    H N++ LLG         L+
Sbjct: 118 IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRN 379
           + +   + LGQG    V++GR    G   A+K  +  S    ++    E  ++ +L H+N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 380 LVRLLGFSFEGTERLLIY 397
           +V+L     E T      
Sbjct: 69  IVKLFAI-EEETTTRHKV 85

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 309 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FK 366
           S + +        + F    KLG G FG V+     S G E  +K ++K+  Q  +E  +
Sbjct: 9   SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE 68

Query: 367 NEVLLVARLQHRNLVRLLGFSFE 389
            E+ ++  L H N++++    FE
Sbjct: 69  AEIEVLKSLDHPNIIKIFEV-FE 90

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
            +LG+G FG+V   R      + G+ +AVK+L  ++ +   +F+ E+ ++  LQH N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 383 LLGFSFEGTER--LLIYEF 399
             G  +    R   LI E+
Sbjct: 76  YKGVCYSAGRRNLKLIMEY 94

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--------SHGQEIAVKRLSKNSVQGEL-EFKNEVLLV 372
           +  +    LG+G FG V                  +AVK L  ++ + +L +  +E+ ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 373 ARL-QHRNLVRLLGFSFEGTERLLIYEF 399
             + +H+N++ LLG   +     +I E+
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEY 122

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 59.8 bits (145), Expect = 4e-10
 Identities = 17/112 (15%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 290 RRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEI 349
           +  +Q  D       +  ++       I      +S   ++G GG   V++      Q  
Sbjct: 24  KFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIY 83

Query: 350 AVKRLSKNSVQGEL--EFKNEVLLVARLQHRNL--VRLLGFSFEGTERLLIY 397
           A+K ++      +    ++NE+  + +LQ  +   +RL  +     + + + 
Sbjct: 84  AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY-EITDQYIYMV 134

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF 388
           LG+G +G VY GR LS+   IA+K + +   +       E+ L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 389 EGTERLLIY-EF 399
           E    + I+ E 
Sbjct: 90  EN-GFIKIFMEQ 100

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)

Query: 328 NKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382
            +LG+G FG+V   R      + G+ +AVK+L  ++ +   +F+ E+ ++  LQH N+V+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 383 LLGFSFEGTER--LLIYEF 399
             G  +    R   LI E+
Sbjct: 107 YKGVCYSAGRRNLKLIMEY 125

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 327 DNKLGQGGFGAVYKGRLSHGQE----IAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
           D  +G+G FG VY G      +     A+K LS+ +   ++  F  E LL+  L H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 382 RLLGFSFEGTERLLI 396
            L+G          +
Sbjct: 86  ALIGIMLPPEGLPHV 100

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 59.5 bits (144), Expect = 6e-10
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRN 379
           + +   + LGQG    V++GR    G   A+K  +  S    ++    E  ++ +L H+N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 380 LVRLLGFSFEGTERLLIY 397
           +V+L     E T      
Sbjct: 69  IVKLFAI-EEETTTRHKV 85

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 58.4 bits (142), Expect = 7e-10
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 327 DNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
           +  +G+G FG VY G L          AVK L++ +  GE+ +F  E +++    H N++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89

Query: 382 RLLGFSFEGTERLLI 396
            LLG         L+
Sbjct: 90  SLLGICLRSEGSPLV 104

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 58.5 bits (142), Expect = 8e-10
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN 379
            ++F     LGQG FG V K R     +  A+K++     +      +EV+L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNHQY 63

Query: 380 LVRLLGF 386
           +VR    
Sbjct: 64  VVRYYAA 70

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 58.9 bits (143), Expect = 8e-10
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--------SHGQEIAVKRLSKNSVQGEL-EFKNEVLLV 372
           +  +    LG+G FG V                  +AVK L  ++ + +L +  +E+ ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 373 ARL-QHRNLVRLLGFSFEGTERLLIYEF 399
             + +H+N++ LLG   +     +I E+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEY 168

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 59.0 bits (143), Expect = 9e-10
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 289 LRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFS----TDNKLGQGGFGAVYKGR-L 343
           +R +     +   D+       ++    +     +         +LG G FG V++    
Sbjct: 14  VRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEK 73

Query: 344 SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           + G+    K ++      +   KNE+ ++ +L H  L+ L    FE    + LI EF
Sbjct: 74  ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA-FEDKYEMVLILEF 129

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.5 bits (142), Expect = 9e-10
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           ++    KLG+GGF  V     L  G   A+KR+  +  Q   E + E  +     H N++
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 382 RLLGFSFE---GTERLLI 396
           RL+ +            +
Sbjct: 90  RLVAYCLRERGAKHEAWL 107

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
            +LG G FG V+ G  +   ++AVK L + S+  +  F  E  L+ +LQH+ LVRL  
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA 75

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 10/83 (12%)

Query: 327 DNKLGQGGFGAVYKGRL--------SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARL-Q 376
              LG+G FG V             +   ++AVK L  ++ + +L +  +E+ ++  + +
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H+N++ LLG   +     +I E+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEY 156

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE------IAVKRLSKNSVQGEL-EFKNEVLLVAR 374
           N  S    LG G FG V +       +      +AVK L  ++   E     +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 375 L-QHRNLVRLLGFSFEGTERLLIYEF 399
           L  H N+V LLG    G   L+I E+
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEY 108

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 327 DNKLGQGGFGAVYKGR-LSHGQEIAVK--RLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383
           D ++G+G F  VYKG       E+A    +  K +      FK E  ++  LQH N+VR 
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90

Query: 384 LGF---SFEGTERLLIY-EF 399
                 + +G + +++  E 
Sbjct: 91  YDSWESTVKGKKCIVLVTEL 110

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
                   +G+G FG V  G    G ++AVK +  ++      F  E  ++ +L+H NLV
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLV 77

Query: 382 RLLGFSFEGTERLLI 396
           +LLG   E    L I
Sbjct: 78  QLLGVIVEEKGGLYI 92

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLL 371
              ++ D    ++   K+GQG  G VY    ++ GQE+A+++++      +    NE+L+
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 372 VARLQHRNLVRLLGFSFEGTERLLIYEF 399
           +   ++ N+V  L     G E  ++ E+
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEY 98

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE------IAVKRLSKNSVQGEL-EFKNEVLLVAR 374
            N      LG G FG V         +      +AVK L + +   E     +E+ ++ +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 375 L-QHRNLVRLLGFSFEGTERLLIYEF 399
           L  H N+V LLG         LI+E+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEY 130

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 328 NKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
             LG+G FG V            G+ +AVK L  ++       +K E+ ++  L H +++
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96

Query: 382 RLLGFSFEGTER--LLIYEF 399
           +  G   +       L+ E+
Sbjct: 97  KYKGCCEDAGAASLQLVMEY 116

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 327 DNKLGQGGFGAVYKGRLSHGQE---IAVKRLSKNSVQGEL-EFKNEVLLVARL-QHRNLV 381
            + +G+G FG V K R+         A+KR+ + + + +  +F  E+ ++ +L  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 382 RLLGFSFEGTERLLIYEF 399
            LLG         L  E+
Sbjct: 90  NLLGACEHRGYLYLAIEY 107

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKN--SVQGELEFKNEVLLVARL 375
             F+    LG+G FG+V + +L        ++AVK L  +  +     EF  E   +   
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 376 QHRNLVRLLGFSFEGTER------LLIYEF 399
            H ++ +L+G S     +      ++I  F
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE------IAVKRLSKNSVQGEL-EFKNEVLLVAR 374
           NN      LG G FG V +       +      +AVK L   +   E     +E+ +++ 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 375 L-QHRNLVRLLGFSFEGTERLLIYEF 399
           L QH N+V LLG    G   L+I E+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY 131

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--SHGQEI--AVKRLSKN-SVQGELEFKNEVLLVARLQ 376
            +   +  LG+G FG VY+G      G++I  AVK   K+ ++  + +F +E +++  L 
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71

Query: 377 HRNLVRLLG 385
           H ++V+L+G
Sbjct: 72  HPHIVKLIG 80

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 309 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE--F 365
           S + +          ++    LG+G FG V K +     QE AVK ++K S + +     
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 366 KNEVLLVARLQHRNLVRLLGFSFE 389
             EV L+ +L H N+++L     E
Sbjct: 69  LREVELLKKLDHPNIMKLFEI-LE 91

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--SHGQEI--AVKRLSKNSVQGEL---EFKNEVLLVAR 374
            +     KLG G FG V +G      G+ +  AVK L  + +       +F  EV  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 375 LQHRNLVRLLG 385
           L HRNL+RL G
Sbjct: 78  LDHRNLIRLYG 88

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 5/111 (4%)

Query: 290 RRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQE 348
               Q   +T       +           D      +  K+G+G  G V   R    G++
Sbjct: 17  NLYFQSGVVTHEQFKAALRM----VVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQ 72

Query: 349 IAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           +AVK +     Q      NEV+++   QH N+V +      G E  ++ EF
Sbjct: 73  VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 31/168 (18%)

Query: 238 PSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQD 297
           P   + P         + +G +    G                           R +   
Sbjct: 93  PCEPTAPVLIPGDERKRRRGYDVDEQGK------------------------IVRGKGTV 128

Query: 298 LTKADEINTVESLQFDFSTIRDATNNFST----DNKLGQGGFGAVYKGR-LSHGQEIAVK 352
            +  D        Q+    +    ++         +LG G FG V++    + G   A K
Sbjct: 129 SSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAK 188

Query: 353 RLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
            +       +   + E+  ++ L+H  LV L    FE    + +IYEF
Sbjct: 189 FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-FEDDNEMVMIYEF 235

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 327 DNKLGQGGFGAVYKGRLSHGQE---IAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLVR 382
           D +LG G FG+V +G     ++   +A+K L + + + +  E   E  ++ +L +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 383 LLG 385
           L+G
Sbjct: 75  LIG 77

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE-----IAVKRLSKNSVQGEL-EFKNEVLLVARL 375
             F     LG G FG VYKG      E     +A+K L + +      E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 376 QHRNLVRLLG 385
            + ++ RLLG
Sbjct: 75  DNPHVCRLLG 84

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 71

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG         +I EF
Sbjct: 72  VQLLGVCTREPPFYIITEF 90

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 326 TDNKLGQGGFGAVYKGRLSHGQE---IAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
            D +LG G FG+V +G     ++   +A+K L + + + +  E   E  ++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 382 RLLG 385
           RL+G
Sbjct: 400 RLIG 403

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
             S    LG G FG V+K    + G ++A K +    ++ + E KNE+ ++ +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 382 RLLGFSFEGTERL-LIYEF 399
           +L    FE    + L+ E+
Sbjct: 150 QLYDA-FESKNDIVLVMEY 167

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 327 DNKLGQGGFGAVYKGRL--SHGQEI--AVKRLSKNSVQGE-LEFKNEVLLVARLQHRNLV 381
           +  +G G  G V  GRL     +++  A+K L     + +  +F +E  ++ +  H N++
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 382 RLLGFSFEGTERLLIYEF 399
           RL G    G   +++ E+
Sbjct: 114 RLEGVVTRGRLAMIVTEY 131

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE----IAVKRLSKN--SVQGELEFKNEVLLVARL 375
           N       LG+G FG+V +G L         +AVK +  +  S +   EF +E   +   
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 376 QHRNLVRLLGFSFEG-----TERLLIYEF 399
            H N++RLLG   E       + ++I  F
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPF 122

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE----IAVKRLSKNSVQGE-LEFKNEVLLVARLQ 376
            N S D  +G G FG V  GRL    +    +A+K L     + +  +F  E  ++ +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H N++RL G   +    +++ E+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEY 127

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 56.1 bits (136), Expect = 5e-09
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            +F     +G GGFG V+K +    G+   +KR+  N+     + + EV  +A+L H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 381 VRLLGFSFEGTE 392
           V   G  ++G +
Sbjct: 67  VHYNG-CWDGFD 77

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 56.1 bits (136), Expect = 5e-09
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--SHGQEI--AVKRLSKNSVQGEL-EFKNEVLLVARLQ 376
                   +G+G FG V++G         +  A+K     +      +F  E L + +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 377 HRNLVRLLG 385
           H ++V+L+G
Sbjct: 75  HPHIVKLIG 83

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGE-LEFKNEVLLVARL 375
           +  +    +G G FG VYKG L          +A+K L     + + ++F  E  ++ + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H N++RL G   +    ++I E+
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEY 127

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 328 NKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGF 386
           +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NLV+LLG 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 284

Query: 387 SFEGTERLLIYEF 399
                   +I EF
Sbjct: 285 CTREPPFYIITEF 297

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 56.3 bits (136), Expect = 5e-09
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFK---NE 368
           +     D    FS   ++G G FGAVY  R + + + +A+K++S +  Q   +++    E
Sbjct: 45  ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104

Query: 369 VLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           V  + +L+H N ++  G         L+ E+
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGEL-EFKNEVLLVAR 374
           +       LG+G FG V +            + +AVK L + +   E     +E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 375 L-QHRNLVRLLGF-SFEGTERLLIYEF 399
           +  H N+V LLG  +  G   ++I EF
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEF 113

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 56.6 bits (137), Expect = 6e-09
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 291 RRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEI 349
               +++L    ++       F  S     +  +    KLG G +G V   R      E 
Sbjct: 7   HSSGRENLYFQGDLQ-ATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVER 65

Query: 350 AVKRLSKNSVQGE--LEFKNEVLLVARLQHRNLVRLLGFSFE 389
           A+K + K SV      +   EV ++  L H N+++L  F FE
Sbjct: 66  AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF-FE 106

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH 377
           D    +    +LG G FG VYK +    G   A K +   S +   ++  E+ ++A   H
Sbjct: 16  DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 75

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
             +V+LLG  +   +  ++ EF
Sbjct: 76  PYIVKLLGAYYHDGKLWIMIEF 97

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 12/94 (12%)

Query: 313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKN-EVLL 371
           D  T       ++    +G G FG V++ +L    E+A+K+     V  +  FKN E+ +
Sbjct: 31  DGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK-----VLQDKRFKNRELQI 85

Query: 372 VARLQHRNLVRLLGFSFEGTERL------LIYEF 399
           +  ++H N+V L  F +   ++       L+ E+
Sbjct: 86  MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.4 bits (134), Expect = 7e-09
 Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 2/96 (2%)

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE 364
               L    +   D    F+   K+G+G FG V+KG      + +A+K +     + E+E
Sbjct: 6   VQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE 65

Query: 365 -FKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
             + E+ ++++     + +  G   + T+  +I E+
Sbjct: 66  DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 328 NKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNLV 381
             LG+G FG V   R      + G+++AVK L   S    + + K E+ ++  L H N+V
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 382 RLLGFSFEGTER--LLIYEF 399
           +  G   E       LI EF
Sbjct: 87  KYKGICTEDGGNGIKLIMEF 106

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 10/111 (9%)

Query: 286 CVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH 345
           C  L + K  +    A +         +   ++           +G+G FG V  G    
Sbjct: 164 CTRLIKPKVMEGTVAAQDEFYRSGWALNMKELK-------LLQTIGKGEFGDVMLGDY-R 215

Query: 346 GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396
           G ++AVK +  ++      F  E  ++ +L+H NLV+LLG   E    L I
Sbjct: 216 GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 55.3 bits (134), Expect = 8e-09
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH 377
           +    F     LG G F  V+  +    G+  A+K + K+    +   +NE+ ++ +++H
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65

Query: 378 RNLVRLLGFSFE 389
            N+V L    +E
Sbjct: 66  ENIVTLEDI-YE 76

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE 364
                 F   +    ++ +     LG+G FG V   +    GQE AVK +SK  V+ + +
Sbjct: 10  HATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD 69

Query: 365 ---FKNEVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
                 EV L+ +L H N+++L  F FE      L+ E 
Sbjct: 70  KESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEV 107

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 54.9 bits (133), Expect = 9e-09
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 315 STIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVA 373
           ST  D    ++ +N +G+G +G V            A K++ K  V+    FK E+ ++ 
Sbjct: 2   STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61

Query: 374 RLQHRNLVRLLGFSFE 389
            L H N++RL    FE
Sbjct: 62  SLDHPNIIRLYET-FE 76

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 327 DNKLGQGGFGAVYKGRL-SHGQEI--AVKRLSKNSVQGEL--EFKNEVLLVARLQHRNLV 381
           D +LG G FG V KG           AVK L   +    L  E   E  ++ +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 382 RLLG 385
           R++G
Sbjct: 82  RMIG 85

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE---FKNEVLLVARLQH 377
            NF  + K+G+G F  VY+   L  G  +A+K++    +           E+ L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 378 RNLVRLLGFSFEGTERLLIY 397
            N+++    SF     L I 
Sbjct: 92  PNVIKYYA-SFIEDNELNIV 110

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 318 RDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ 376
           ++    +     LG+G FG V++    S  +    K +           K E+ ++   +
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV-LVKKEISILNIAR 59

Query: 377 HRNLVRLLGFSFEGTERL-LIYEF 399
           HRN++ L   SFE  E L +I+EF
Sbjct: 60  HRNILHLHE-SFESMEELVMIFEF 82

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 327 DNKLGQGGFGAVYKGRLSHGQE-----IAVKRLSKNSVQGEL-EFKNEVLLVARLQHRNL 380
              LG G FG V+KG      E     + +K +   S +       + +L +  L H ++
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 381 VRLLG 385
           VRLLG
Sbjct: 78  VRLLG 82

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
            KLG G FG V+    +   ++AVK + K        F  E  ++  LQH  LV+L  
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA 250

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
            KLGQG FG V+ G  +    +A+K L   ++  E  F  E  ++ +L+H  LV+L  
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA 329

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
            KLGQG FG V+ G  +    +A+K L   ++  E  F  E  ++ +L+H  LV+L  
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA 246

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE-----IAVKRLSKNSVQGEL-EFKNEVLLVARL 375
             F     LG G FG VYKG      E     +A+K L + +      E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 376 QHRNLVRLLG 385
            + ++ RLLG
Sbjct: 75  DNPHVCRLLG 84

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--SHGQEI--AVKRLSKNSVQGEL-EFKNEVLLVARLQ 376
                   +G+G FG V++G         +  A+K     +      +F  E L + +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449

Query: 377 HRNLVRLLG 385
           H ++V+L+G
Sbjct: 450 HPHIVKLIG 458

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKR--LSKNSVQGELEFKNEVLLVARL-Q 376
           T  F    K+G G FG+V+K      G   A+KR          E     EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 377 HRNLVRLLGFSFEGTERLLIY-EF 399
           H ++VR    ++   + +LI  E+
Sbjct: 70  HSHVVRYFS-AWAEDDHMLIQNEY 92

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNL 380
            +    +LG GGFG V +      G+++A+K+  +       E +  E+ ++ +L H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 381 VRLL 384
           V   
Sbjct: 75  VSAR 78

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 14/105 (13%), Positives = 27/105 (25%), Gaps = 9/105 (8%)

Query: 290 RRRKQKQDLTKADEINTVESLQFD-----FSTIRDATNNFSTDNKLGQGGFGAVYKGR-L 343
            R +  ++     E  T      +      S +            L  G    V+  R +
Sbjct: 25  CREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDV 84

Query: 344 SHGQEIAVKRLSKNSVQGELE---FKNEVLLVARLQHRNLVRLLG 385
              ++ A+K  +  +     E           ARL   +      
Sbjct: 85  ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARD 129

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGF 386
            L +GGF  VY+ + +  G+E A+KRL  N  +       EV  + +L  H N+V+    
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 387 SFEGTERL 394
           +  G E  
Sbjct: 95  ASIGKEES 102

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVL 370
            D S +RD    F     +G G +G VYKGR +  GQ  A+K +       E E K E+ 
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEIN 72

Query: 371 LVARL-QHRNLVRLLG 385
           ++ +   HRN+    G
Sbjct: 73  MLKKYSHHRNIATYYG 88

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQG---ELEFKNEVLLVARLQH 377
            +F     LG+G FG VY  R       +A+K L K  ++    E + + EV + + L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 378 RNLVRLLGFSFEGTERL-LIYEF 399
            N++RL G+ F    R+ LI E+
Sbjct: 69  PNILRLYGY-FHDATRVYLILEY 90

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSV-QGELEF-KNEVLLVARLQHR 378
             +    K+G+G FG     +    G++  +K ++ + +   E E  + EV ++A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 379 NLVRLLGFSFEGTERLLIY 397
           N+V+    SFE    L I 
Sbjct: 84  NIVQYRE-SFEENGSLYIV 101

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEV-LLVARLQHRNLV 381
           +F   + LG G  G +    +   +++AVKR+             EV LL    +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA---DREVQLLRESDEHPNVI 81

Query: 382 RLLGF 386
           R    
Sbjct: 82  RYFCT 86

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHR 378
           +F   ++LG G +G V+K R    G+  AVKR        +       EV    ++ QH 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 379 NLVRLLGFSFEGTERLLIY-EF 399
             VRL   ++E    L +  E 
Sbjct: 118 CCVRLEQ-AWEEGGILYLQTEL 138

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 52.2 bits (126), Expect = 7e-08
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 315 STIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG---ELEFKNEVL 370
           + I +   +F   N LG+G F  VY+   +  G E+A+K + K ++         +NEV 
Sbjct: 4   TCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK 63

Query: 371 LVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           +  +L+H +++ L  + FE +  + L+ E 
Sbjct: 64  IHCQLKHPSILELYNY-FEDSNYVYLVLEM 92

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 12/93 (12%)

Query: 315 STIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL------EFKN 367
           S + D   ++    +LG G F  V K R    G+E A K + K  +          E + 
Sbjct: 1   SMVED---HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 57

Query: 368 EVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           EV ++  ++H N++ L    FE    + LI E 
Sbjct: 58  EVNILREIRHPNIITLHDI-FENKTDVVLILEL 89

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRN 379
            +F     LG+GGFG V++ +        A+KR+   + +   E    EV  +A+L+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 380 LVRLLGFSFEGTE 392
           +VR      E   
Sbjct: 65  IVRYFNAWLEKNT 77

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVK-----RLSKNSVQG 361
           E+L F   ++ +    +     +GQG +G V            A+K     ++ + + + 
Sbjct: 12  ENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKD 71

Query: 362 ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396
               K EV L+ +L H N+ RL    +E  + + +
Sbjct: 72  VERIKTEVRLMKKLHHPNIARLYEV-YEDEQYICL 105

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 318 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEV-LLVARLQ 376
           +   N   ++  LG G  G V       G+ +AVKR+  +          E+ LL     
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDD 67

Query: 377 HRNLVRLLGF 386
           H N++R    
Sbjct: 68  HPNVIRYYCS 77

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL------EFKNEVLL 371
           +  + + T  +LG G F  V K R  S G + A K + K   +         + + EV +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67

Query: 372 VARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           +  +QH N++ L    +E    + LI E 
Sbjct: 68  LKEIQHPNVITLHEV-YENKTDVILILEL 95

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 16/124 (12%)

Query: 291 RRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEI 349
                       +   +    +          ++    KLG G +G V   +  +   E 
Sbjct: 5   HHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK 64

Query: 350 AVKRLSKNSVQG-------------ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL-L 395
           A+K + K+                   E  NE+ L+  L H N+++L    FE  +   L
Sbjct: 65  AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV-FEDKKYFYL 123

Query: 396 IYEF 399
           + EF
Sbjct: 124 VTEF 127

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 15/112 (13%)

Query: 290 RRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQE 348
            R   ++ L K DE +  +               F    KLG+G +G+VYK      GQ 
Sbjct: 7   LRNPPRRQLKKLDEDSLTK----------QPEEVFDVLEKLGEGSYGSVYKAIHKETGQI 56

Query: 349 IAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           +A+K++    V+ +L+    E+ ++ +    ++V+  G  F+ T+  ++ E+
Sbjct: 57  VAIKQV---PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRN 379
           +++     +G G    V         +++A+KR++    Q  ++    E+  +++  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 380 LVRLLGFSF 388
           +V     SF
Sbjct: 75  IVSYYT-SF 82

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFS 387
           LG+G    V     L   QE AVK + K           EV ++ + Q HRN++ L+ F 
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF- 79

Query: 388 FEGTERLLI 396
           FE  +R  +
Sbjct: 80  FEEEDRFYL 88

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL------EFKNEVLL 371
              + +    +LG G F  V K R  S G E A K + K   +         E + EV +
Sbjct: 9   KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68

Query: 372 VARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           + ++ H N++ L    +E    + LI E 
Sbjct: 69  LRQVLHPNIITLHDV-YENRTDVVLILEL 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 318 RDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL------EFKNEVL 370
           +   + +    +LG G F  V K R  S G E A K + K   +         E + EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 371 LVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           ++ ++ H N++ L    +E    + LI E 
Sbjct: 68  ILRQVLHHNVITLHDV-YENRTDVVLILEL 96

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 311 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE--FKN 367
           +F  +     ++N+    +LG+G F  V +    + G E A K ++   +        + 
Sbjct: 18  EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77

Query: 368 EVLLVARLQHRNLVRLLGFSFE 389
           E  +  +LQH N+VRL     +
Sbjct: 78  EARICRKLQHPNIVRLHDS-IQ 98

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 21/128 (16%)

Query: 292 RKQKQDLTKADEINTVESLQFDFSTIRDATNN-----------FSTDNKLGQGGFGAVYK 340
           + +++ L    EI    S    F       ++           +     LG G  G V  
Sbjct: 94  KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKL 153

Query: 341 GR-LSHGQEIAVKRLSKNSVQG--------ELEFKNEVLLVARLQHRNLVRLLGFSFEGT 391
                  +++A++ +SK              L  + E+ ++ +L H  ++++  F F+  
Sbjct: 154 AFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAE 212

Query: 392 ERLLIYEF 399
           +  ++ E 
Sbjct: 213 DYYIVLEL 220

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 50.2 bits (121), Expect = 4e-07
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE--LEFKNEVLLVARLQH 377
           ++N+    +LG+G F  V +    + G E A K ++   +      + + E  +  +LQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 378 RNLVRLLGFSFE 389
            N+VRL     +
Sbjct: 65  PNIVRLHDS-IQ 75

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 50.7 bits (121), Expect = 4e-07
 Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGELEFKNE 368
           +  +  +      + LG+G F  VY+            Q+  +K     +     EF   
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---EFYIG 114

Query: 369 VLLVARLQ---HRNLVRLLGFSFEGTERLLIYEF 399
             L+ RL+       ++           +L+ E 
Sbjct: 115 TQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGEL 148

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 315 STIRDATN--NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG---ELEFKNE 368
             + D  +   +     LG+GGF   ++       +  A K + K+ +       +   E
Sbjct: 6   EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME 65

Query: 369 VLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           + +   L H+++V   GF FE  + + ++ E 
Sbjct: 66  ISIHRSLAHQHVVGFHGF-FEDNDFVFVVLEL 96

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG---ELEFKNEVLLVARLQHRNLVRLLG 385
           LG+GGF   ++       +  A K + K+ +       +   E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 386 FSFEGTERL-LIYEF 399
           F FE  + + ++ E 
Sbjct: 109 F-FEDNDFVFVVLEL 122

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 50.1 bits (120), Expect = 6e-07
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKN-EVLLV 372
              R    +++    +G G FG VY+ +L   G+ +A+K+     V  +  FKN E+ ++
Sbjct: 47  GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRELQIM 101

Query: 373 ARLQHRNLVRLLGFSFEGTERL------LIYEF 399
            +L H N+VRL  F +   E+       L+ ++
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 49.5 bits (119), Expect = 6e-07
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELE--FKNEVLLVARLQH 377
           ++F     LG+G FG VY  R       +A+K L K+ + +  +E   + E+ + + L+H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 378 RNLVRLLGFSFEGTERL-LIYEF 399
            N++R+  + F   +R+ L+ EF
Sbjct: 74  PNILRMYNY-FHDRKRIYLMLEF 95

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSV-QGELEF-KNEVLLVARLQHR 378
            ++     +G G +G   K R  S G+ +  K L   S+ + E +   +EV L+  L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 379 NLVRLLG-FSFEGTERLLIY 397
           N+VR            L I 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIV 85

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG--ELEFKNEVLLV 372
           T    T  +    +LG+G F  V +   +  GQE A   ++   +      + + E  + 
Sbjct: 5   TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64

Query: 373 ARLQHRNLVRLLGFSFE 389
             L+H N+VRL      
Sbjct: 65  RLLKHPNIVRLHDS-IS 80

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 324 FSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL-----EFKNEVLLVARLQH 377
           +     +G+G F  V +      GQ+ AVK +              + K E  +   L+H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85

Query: 378 RNLVRLLGFSFEGTERL-LIYEF 399
            ++V LL   +     L +++EF
Sbjct: 86  PHIVELLET-YSSDGMLYMVFEF 107

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 10/88 (11%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE--------FKNEVLL 371
            + +     LG G  G V         +++A+K +SK                 + E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 372 VARLQHRNLVRLLGFSFEGTERLLIYEF 399
           + +L H  ++++  F F+  +  ++ E 
Sbjct: 69  LKKLNHPCIIKIKNF-FDAEDYYIVLEL 95

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 47.6 bits (113), Expect = 3e-06
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 313 DFSTIRDATNNFSTDNKLGQG--GFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL--EFKN 367
             S+       +     +G+G      V   R    G+ + V+R++  +   E+    + 
Sbjct: 16  GMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQG 75

Query: 368 EVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
           E+ +     H N+V          E  ++  F
Sbjct: 76  ELHVSKLFNHPNIVPYRATFIADNELWVVTSF 107

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGEL-EFKNEV-LLVA 373
           +       LG+G FG V +            + +AVK L + +   E     +E+ +L+ 
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 374 RLQHRNLVRLLGFSFEGTERLLI 396
              H N+V LLG   +    L++
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMV 104

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE 364
            V     D S     ++ F  +++LG+G    VY+ +     +  A+K L K   +  + 
Sbjct: 37  LVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV- 95

Query: 365 FKNEVLLVARLQHRNLVRLLGFSFE 389
            + E+ ++ RL H N+++L    FE
Sbjct: 96  -RTEIGVLLRLSHPNIIKLKEI-FE 118

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN------EVLLVARLQHR--NL 380
           LG GGFG+VY G  +S    +A+K + K+ +    E  N      EV+L+ ++      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 381 VRLL 384
           +RLL
Sbjct: 111 IRLL 114

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 46.4 bits (111), Expect = 9e-06
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 14/93 (15%)

Query: 317 IRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN-------- 367
           ++     +   + LG+G F  VYK R  +  Q +A+K++         E K+        
Sbjct: 5   VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH---RSEAKDGINRTALR 61

Query: 368 EVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           E+ L+  L H N++ LL   F     + L+++F
Sbjct: 62  EIKLLQELSHPNIIGLLDA-FGHKSNISLVFDF 93

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRN 379
            +F     +G+GGFG V++ +        A+KR+   + +   E    EV  +A+L+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 380 LVR 382
           +VR
Sbjct: 66  IVR 68

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 326 TDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHR-NLV 381
           T  +LG+G F  V +    S GQE A K L K     +   E  +E+ ++   +    ++
Sbjct: 33  TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92

Query: 382 RLLGFSFEGTERL-LIYEF 399
            L    +E T  + LI E+
Sbjct: 93  NLHEV-YENTSEIILILEY 110

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 11/66 (16%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN------EV----LLVARLQHR 378
           LG+GGFG V+ G  L+   ++A+K + +N V G     +      EV     + A   H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98

Query: 379 NLVRLL 384
            ++RLL
Sbjct: 99  GVIRLL 104

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 6/84 (7%)

Query: 315 STIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVA 373
           S      +    D  LG+G F    K       Q  AVK +SK         + E+  + 
Sbjct: 4   SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA---NTQKEITALK 60

Query: 374 RLQ-HRNLVRLLGFSFEGTERLLI 396
             + H N+V+L    F       +
Sbjct: 61  LCEGHPNIVKLHEV-FHDQLHTFL 83

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 11/94 (11%)

Query: 306 TVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG--- 361
             E    D++  ++    +   + +G+G    V +    + G E AVK +   + +    
Sbjct: 78  GPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE 137

Query: 362 -----ELEFKNEVLLVARL-QHRNLVRLLGFSFE 389
                    + E  ++ ++  H +++ L+   +E
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLIDS-YE 170

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQ----GELEFKNEVLLVARLQHRNLVRL 383
           LG+G +G V +          AVK L K  ++    GE   K E+ L+ RL+H+N+++L
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 329 KLGQGGFGAVYKG---RLSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVR 382
            +  GG G +Y      ++ G+ + +K L  +           E   +A + H ++V+
Sbjct: 87  CIAHGGLGWIYLALDRNVN-GRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%)

Query: 311 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKN- 367
             +     +  + +    K+GQG FG V+K R    GQ++A+K++    ++ E E F   
Sbjct: 7   SVECPFCDEV-SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPIT 62

Query: 368 ---EVLLVARLQHRNLVRLLG 385
              E+ ++  L+H N+V L+ 
Sbjct: 63  ALREIKILQLLKHENVVNLIE 83

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 16/72 (22%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKN---------EVLLV 372
             +    K+G+G +G VYK + S G+ +A+KR+        L+ ++         E+ L+
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR-------LDAEDEGIPSTAIREISLL 73

Query: 373 ARLQHRNLVRLL 384
             L H N+V L+
Sbjct: 74  KELHHPNIVSLI 85

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 10/92 (10%)

Query: 307 VESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEF 365
           V+ L  +     D    +     +G G +    +    +   E AVK + K+        
Sbjct: 10  VQQLHRNSIQFTD---GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP---- 62

Query: 366 KNEVLLVARL-QHRNLVRLLGFSFEGTERLLI 396
             E+ ++ R  QH N++ L    ++  + + +
Sbjct: 63  TEEIEILLRYGQHPNIITLKDV-YDDGKYVYV 93

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 16/75 (21%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN--------EV 369
            +++ F    KLG G +  VYKG   + G  +A+K +        L+ +         E+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK-------LDSEEGTPSTAIREI 54

Query: 370 LLVARLQHRNLVRLL 384
            L+  L+H N+VRL 
Sbjct: 55  SLMKELKHENIVRLY 69

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 9/71 (12%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN--------EVLLVA 373
            +ST + LG G FG V+        +E+ VK + K  V  +   ++        E+ +++
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 374 RLQHRNLVRLL 384
           R++H N++++L
Sbjct: 85  RVEHANIIKVL 95

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 16/72 (22%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKN---------EVLLV 372
             +    K+G+G +G VYK + ++G+  A+K++        LE ++         E+ ++
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR-------LEKEDEGIPSTTIREISIL 54

Query: 373 ARLQHRNLVRLL 384
             L+H N+V+L 
Sbjct: 55  KELKHSNIVKLY 66

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 329 KLGQGGFGAVYKGRLSH---GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG 385
           K+G+G +G VYK +       ++ A+K++    +   +    E+ L+  L+H N++ L  
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQK 85

Query: 386 FSFEGTERL--LIYEF 399
                 +R   L++++
Sbjct: 86  VFLSHADRKVWLLFDY 101

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRL 383
           LG+G +G V         + +AVK +         E  K E+ +   L H N+V+ 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 17/98 (17%)

Query: 314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKN----E 368
               R   + F  +   GQG FG V  G+    G  +A+K+     V  +  F+N     
Sbjct: 15  DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK-----VIQDPRFRNRELQI 69

Query: 369 VLLVARLQHRNLVRLLGFSFEGTER-------LLIYEF 399
           +  +A L H N+V+L  + +   ER        ++ E+
Sbjct: 70  MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 16/72 (22%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKN--------EVLLV 372
             +   +KLG+G +  VYKG+       +A+K +        LE +         EV L+
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR-------LEHEEGAPCTAIREVSLL 54

Query: 373 ARLQHRNLVRLL 384
             L+H N+V L 
Sbjct: 55  KDLKHANIVTLH 66

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 8/63 (12%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGF 386
            LG G  G V +       ++ A+K L         + + EV L  R  Q  ++VR++  
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDV 79

Query: 387 SFE 389
            +E
Sbjct: 80  -YE 81

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 43.1 bits (102), Expect = 9e-05
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 13/89 (14%)

Query: 308 ESLQFDFSTIRDATNNFS-----TDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG 361
             L+  F          +     +   LG G  G V +      GQ+ A+K L  +    
Sbjct: 10  SGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--- 66

Query: 362 ELEFKNEVLLVARLQ-HRNLVRLLGFSFE 389
             + + EV    +     ++V +L   +E
Sbjct: 67  --KARQEVDHHWQASGGPHIVCILDV-YE 92

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 6/110 (5%)

Query: 295 KQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEI-AVKR 353
            QD   AD +   E +      +R   ++F     +G+G F  V   ++    ++ A+K 
Sbjct: 34  AQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKI 93

Query: 354 LSKNSV--QGELE-FKNEVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
           ++K  +  +GE+  F+ E  ++     R + +L  F+F+    L L+ E+
Sbjct: 94  MNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH-FAFQDENYLYLVMEY 142

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 326 TDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRL 383
           T   LG G  G V +       ++ A+K L         + + EV L  R     ++VR+
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRI 120

Query: 384 LGFSFE 389
           +   +E
Sbjct: 121 VDV-YE 125

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKN-EVLLVARLQHR 378
           +  +S    LG G FG V +      G+  A+K+     V  +  +KN E+ ++  L H 
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKK-----VLQDPRYKNRELDIMKVLDHV 60

Query: 379 NLVRLLGFSFEGTER 393
           N+++L+ + +   + 
Sbjct: 61  NIIKLVDYFYTTGDE 75

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 8/60 (13%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL---EFKNEVLLVARLQHRNLVRLL 384
             G       ++    +  +++A+  +    V  +    E  +  L ++R+    + R+L
Sbjct: 38  FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---EVLLVARLQH 377
             +    K+G+G +G V+K R    GQ +A+K+    S    +  K    E+ ++ +L+H
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKH 61

Query: 378 RNLVRLLGFSFEGTERL-LIYEF 399
            NLV LL   F    RL L++E+
Sbjct: 62  PNLVNLLEV-FRRKRRLHLVFEY 83

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRNLVRL 383
           LG+G +G V         + +AVK +         E  K E+ +   L H N+V+ 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 4/52 (7%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE---LEFKNEVLLVARLQH 377
           LGQ    A  +      G+   V               + K EVL +  L+ 
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 270 VVSTSIFIIALVALVT-CVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDN 328
            V++   +  L ALV    F   RK K      + ++  +        +R    ++    
Sbjct: 19  EVNSDCLLDGLDALVYDLDFPALRKNK---NIDNFLSRYKDTINKIRDLRMKAEDYEVVK 75

Query: 329 KLGQGGFGAVYKGRLSHGQEI-AVKRLSKNSV--QGELE-FKNEVLLVARLQHRNLVRLL 384
            +G+G FG V   R    +++ A+K LSK  +  + +   F  E  ++A      +V+L 
Sbjct: 76  VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135

Query: 385 GFSFEGTERL-LIYEF 399
            ++F+    L ++ E+
Sbjct: 136 -YAFQDDRYLYMVMEY 150

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN----EVLLVARLQ 376
             +     +G+G +G V K R    G+ +A+K+    S   +   K     E+ L+ +L+
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF-LESDDDK-MVKKIAMREIKLLKQLR 82

Query: 377 HRNLVRLLGFSFEGTERL-LIYEF 399
           H NLV LL    +  +R  L++EF
Sbjct: 83  HENLVNLLEV-CKKKKRWYLVFEF 105

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 22/97 (22%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEF--------------- 365
           N++     L QG F  +         +  A+K+  K+ ++ + +F               
Sbjct: 31  NDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88

Query: 366 --KNEVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
             KNE+ ++  +++   +   G      + + +IYE+
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEY 124

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 24/127 (18%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 279 ALVALVT-CVFLRRRKQKQDLTKADEINTVESLQFDFSTIRDATNNFSTDNKLGQGGFGA 337
            L+ L   C     R++K      + +   +        +R    +F     +G+G FG 
Sbjct: 33  ILICLYDECNNSPLRREKNI---LEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGE 89

Query: 338 VYKGRLSHGQEI-AVKRLSKNSV--QGELE-FKNEVLLVARLQHRNLVRLLGFSFEGTER 393
           V   +L +  ++ A+K L+K  +  + E   F+ E  ++     + +  L  ++F+    
Sbjct: 90  VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH-YAFQDDNN 148

Query: 394 L-LIYEF 399
           L L+ ++
Sbjct: 149 LYLVMDY 155

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 12/80 (15%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQG---------ELEFKNEVL 370
             N+     LG+G    V +       +E AVK +                      EV 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 371 LVARL-QHRNLVRLLGFSFE 389
           ++ ++  H N+++L    +E
Sbjct: 76  ILRKVSGHPNIIQLKDT-YE 94

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 17/73 (23%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---------EVLL 371
            NF    K+G+G +G VYK R    G+ +A+K++        L+ +          E+ L
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-------LDTETEGVPSTAIREISL 55

Query: 372 VARLQHRNLVRLL 384
           +  L H N+V+LL
Sbjct: 56  LKELNHPNIVKLL 68

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 17/73 (23%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---------EVLL 371
             +    K+G+G +G V+K +     + +A+KR+        L+  +         E+ L
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-------LDDDDEGVPSSALREICL 54

Query: 372 VARLQHRNLVRLL 384
           +  L+H+N+VRL 
Sbjct: 55  LKELKHKNIVRLH 67

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 17/88 (19%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN---------EVLL 371
           + +    KLG+G +G VYK       + +A+KR+        LE +          EV L
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-------LEHEEEGVPGTAIREVSL 86

Query: 372 VARLQHRNLVRLLGFSFEGTERLLIYEF 399
           +  LQHRN++ L           LI+E+
Sbjct: 87  LKELQHRNIIELKSVIHHNHRLHLIFEY 114

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 297 DLTKADEINTVESLQFDFSTIRDAT---NNFSTDNKLGQGGFGAVYKGRLSHGQEI-AVK 352
           D T A+      SLQ      +       +F     LG+G F  V   R        A+K
Sbjct: 2   DGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK 61

Query: 353 RLSKNSV--QGELEF-KNEVLLVARLQHRNLVRLLGFSFEGTERL-LIYEF 399
            L K  +  + ++ +   E  +++RL H   V+L  F+F+  E+L     +
Sbjct: 62  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSY 111

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE--LE-FKNEVLLVARLQHRNLV 381
            +G+GG G VY+       + +A+K +S+            + E     RLQ  ++V
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV 97

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 40.4 bits (94), Expect = 8e-04
 Identities = 11/52 (21%), Positives = 15/52 (28%), Gaps = 4/52 (7%)

Query: 330 LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE---FKNEVLLVARLQH 377
           LGQ    A  +      G+   V                 K EVL +  L+ 
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 132

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	399
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.94
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.94
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.89
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.88
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.54
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.54
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.49
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.4
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.4
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.38
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.37
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.34
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.33
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.32
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.31
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.3
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.29
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.25
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.2
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.17
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.17
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.17
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.11
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.1
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.07
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.05
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.02
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.02
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.02
3niz_A	311	Rhodanese family protein; structural genomics, str	99.01
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.01
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.01
3uqc_A	286	Probable conserved transmembrane protein; structur	99.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.99
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.99
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.98
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.98
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.94
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.94
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.94
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.94
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.94
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.93
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.93
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.93
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.93
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.92
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.91
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.91
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.91
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.91
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.91
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.9
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.9
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.9
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.9
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.9
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.9
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.89
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.89
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.89
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.89
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.89
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.89
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.89
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.88
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.88
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.88
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.88
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.88
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.88
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.88
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.88
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.87
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.87
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.87
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.87
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.86
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.86
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.86
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.86
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.86
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.85
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.85
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.85
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.85
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.85
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.85
3bhy_A	283	Death-associated protein kinase 3; death associate	98.84
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.84
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.84
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.84
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.84
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.84
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.84
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.84
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.83
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.83
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.83
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.83
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.83
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.83
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.83
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.83
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.83
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.82
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.82
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.82
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.82
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.81
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.81
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.81
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.81
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.81
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.81
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.81
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.8
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.8
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.8
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.8
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.8
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.8
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.8
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.8
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.8
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.79
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.79
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.79
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.79
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.78
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.78
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.78
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.78
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.78
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.78
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.77
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.77
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.77
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.77
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.77
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.77
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.77
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.77
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.76
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.76
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.76
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.76
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.76
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.75
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.75
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.75
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.75
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.75
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.75
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.74
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.73
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.73
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.73
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.73
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.73
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.72
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.72
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.72
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.72
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.72
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.72
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.71
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.71
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.71
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.71
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.71
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.7
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.7
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.7
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.7
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.7
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.69
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.69
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.68
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.68
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.68
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.68
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.68
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.67
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.67
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.67
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.67
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.66
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.66
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.66
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.65
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.64
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.63
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.63
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.63
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.62
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.62
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.61
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.6
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.6
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.59
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.59
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.59
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.58
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.58
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.56
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.55
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.55
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.54
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.54
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.53
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.53
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.51
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.5
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.5
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.47
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.47
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.47
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.47
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.44
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.43
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.42
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.42
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.38
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.34
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.33
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.31
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.28
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.27
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.27
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.25
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.2
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.87
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.59
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.39
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.24
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.03
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.84
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.29
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	92.99
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	92.82
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.01
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	90.43
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	87.03
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	86.46
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	80.88

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.94  E-value=8.5e-27  Score=182.11  Aligned_cols=99  Identities=25%  Similarity=0.467  Sum_probs=89.9

Q ss_pred             ccCCCCCcccCCChHHHHHHHHHHHhhhccCCC-CCeeeeeecC-CCceEEEEEEccCCCChhhHHHHHHHHHHHHhhcC
Q 044262           12 QTCYDTGNFTTNSTYGKNRDLFLSSLASNVTAN-KGFYTSTIGQ-IPDAVYGLALCRGDSTPESCASCLNFTVRDMMKNC   89 (399)
Q Consensus        12 ~~c~~~~~~~~~~~~~~~l~~ll~~l~~~a~~~-~~f~~~~~~~-~~~~vygl~~C~~d~~~~~C~~Cl~~a~~~~~~~C   89 (399)
                      +.|+. ++|+++++|++||+.||++|+++++.+ .+|++...+. ++++||||+|||||+++++|..||+.|+.++++.|
T Consensus         8 ~~Cn~-~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~~C   86 (108)
T 3a2e_A            8 SACNT-QKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSIC   86 (108)
T ss_dssp             EEECS-SBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHHT
T ss_pred             eecCC-CccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHC
Confidence            56865 699999999999999999999988654 4577777664 56899999999999999999999999999999999


Q ss_pred             CCCccEEEEeCCCCCeEEEEccccc
Q 044262           90 PNQKEAISWGGMDFPCVVRYSNRSF  114 (399)
Q Consensus        90 ~~~~~~~~~~~~~~~C~~ry~~~~f  114 (399)
                      +++++|+||+++   |+||||+++|
T Consensus        87 ~~~~g~~i~~~~---C~lRY~~~~F  108 (108)
T 3a2e_A           87 NNAIGARVQLVD---CFIQYEQRSF  108 (108)
T ss_dssp             TSBSSEEEEETT---EEEEEESSCC
T ss_pred             CCCceEEEECCC---EEEEEeCCcC
Confidence            999999999999   9999999998

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.89  E-value=2.5e-23  Score=162.36  Aligned_cols=103  Identities=25%  Similarity=0.442  Sum_probs=93.0

Q ss_pred             ceeeccccCCCCchHHHHHHHHHHHHHHHHHHhcCCCCcceeeeecccCCCcceEEEeccCCCCChHhHHHHHHHHHHhh
Q 044262          123 TEVNHNINNITSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADL  202 (399)
Q Consensus       123 ~~~~~~~~~~~~~~~~f~~~~~~ll~~l~~~a~~~~~~~~fa~~~~~~~~~~~vy~l~qC~~dl~~~~C~~Cl~~a~~~~  202 (399)
                      ....|+..+++.+ +.|+.+++.||..|+.+++.+  +.+|++...+..++++||||+||++|+++++|..||+.++.++
T Consensus         6 v~~~Cn~~~~t~~-s~f~~nl~~ll~~L~~~a~~s--~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~   82 (108)
T 3a2e_A            6 VSSACNTQKIPSG-SPFNRNLRAMLADLRQNTAFS--GYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI   82 (108)
T ss_dssp             EEEEECSSBCCTT-CTHHHHHHHHHHHHHHHGGGT--TSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred             eeeecCCCccCCC-ChHHHHHHHHHHHHHhhCccc--cCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            4556788888877 899999999999999998865  5678887776567789999999999999999999999999999


Q ss_pred             hhhcCCCCceeEeCcccccccccccc
Q 044262          203 QSCCYGKKGSYVLGPSCIFRWEMYPF  228 (399)
Q Consensus       203 ~~~c~~~~g~~v~~~~C~~r~~~~~f  228 (399)
                      +++|++++|++||+++|++|||.++|
T Consensus        83 ~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           83 FSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.54  E-value=6.9e-15  Score=136.44  Aligned_cols=79  Identities=29%  Similarity=0.557  Sum_probs=68.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +++|...++||+|+||.||+|.+.      ++..||||+++..+....++|.+|+++|++++|||||+++|++.++++.+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            456777899999999999999874      36789999998877777788999999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        92 lV~Ey   96 (299)
T 4asz_A           92 MVFEY   96 (299)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.54  E-value=1.1e-14  Score=136.94  Aligned_cols=78  Identities=31%  Similarity=0.566  Sum_probs=69.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++|...++||+|+||.||+|.+.      +++.||||.++..+....++|.+|+++|.+++|||||+++|+|.++++++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45666789999999999999974      367899999988777777889999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       121 V~Ey  124 (329)
T 4aoj_A          121 VFEY  124 (329)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9998

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.49  E-value=2.4e-14  Score=133.31  Aligned_cols=77  Identities=36%  Similarity=0.553  Sum_probs=65.1

Q ss_pred             CCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .+...++||+|+||.||+|.+.      .++.||||+++.. .....++|.+|+.+|.+++|||||+|+|+|..+++++|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            3455688999999999999973      3578999999754 33445789999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       107 V~Ey  110 (308)
T 4gt4_A          107 IFSY  110 (308)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9998

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.40  E-value=6.1e-13  Score=125.49  Aligned_cols=78  Identities=21%  Similarity=0.385  Sum_probs=63.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...++||+|+||.||++... +|+.||||.+...  .....+.|.+|+.+|++++|||||++++++...+.++||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            56888899999999999999975 4899999999754  34456689999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       104 y  104 (350)
T 4b9d_A          104 Y  104 (350)
T ss_dssp             C
T ss_pred             C
Confidence            8

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.40  E-value=2.9e-13  Score=127.47  Aligned_cols=78  Identities=27%  Similarity=0.402  Sum_probs=68.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... +|+.||||++........+.+.+|+.+|++++|||||++++++...+.++|||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            45677789999999999999985 4899999999765444455789999999999999999999999999999999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.38  E-value=6.8e-13  Score=128.14  Aligned_cols=79  Identities=27%  Similarity=0.396  Sum_probs=70.5

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.|...++||+|+||.||++... .|+.||||.+........+.+.+|+.+|++++|||||++++++...+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            456788899999999999999975 4899999999766555556799999999999999999999999999999999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.37  E-value=6.3e-13  Score=123.44  Aligned_cols=79  Identities=24%  Similarity=0.483  Sum_probs=66.1

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +...+++...++||+|+||.||+|.++  ..||||.++..  .....+.|.+|+.+|++++|||||+++|++. .+.++|
T Consensus        32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~i  108 (307)
T 3omv_A           32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI  108 (307)
T ss_dssp             BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEE
Confidence            344567778899999999999999874  36999998754  4455678999999999999999999999875 456899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       109 VmEy  112 (307)
T 3omv_A          109 VTQW  112 (307)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9998

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.34  E-value=1.8e-12  Score=122.95  Aligned_cols=90  Identities=26%  Similarity=0.383  Sum_probs=74.0

Q ss_pred             cccChhhHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCC-CCcc
Q 044262          310 LQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQH-RNLV  381 (399)
Q Consensus       310 ~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H-~niv  381 (399)
                      +.++..+++.+.++|...++||+|+||.||+|.+..      ++.||||.++... ....+.|.+|+.+|.+++| ||||
T Consensus        52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV  131 (353)
T 4ase_A           52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV  131 (353)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence            344556677888999999999999999999998743      3579999997653 3445679999999999965 8999


Q ss_pred             ceeEEEEeC-CeEEEEEeC
Q 044262          382 RLLGFSFEG-TERLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~-~~~~lv~Ey  399 (399)
                      +++|+|.+. ++++|||||
T Consensus       132 ~l~g~~~~~~~~~~iV~Ey  150 (353)
T 4ase_A          132 NLLGACTKPGGPLMVIVEF  150 (353)
T ss_dssp             CEEEEECCTTSCCEEEEEC
T ss_pred             EEEEEEEecCCEEEEEEEc
Confidence            999999764 568999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.33  E-value=2.5e-12  Score=117.53  Aligned_cols=78  Identities=23%  Similarity=0.422  Sum_probs=64.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... +|+.||||.+.+..   ......+.+|+.+|++++|||||++++++...+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            46888899999999999999864 58999999997642   233457999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        93 Ey   94 (275)
T 3hyh_A           93 EY   94 (275)
T ss_dssp             EC
T ss_pred             eC
Confidence            98

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.32  E-value=2e-12  Score=119.94  Aligned_cols=77  Identities=23%  Similarity=0.266  Sum_probs=67.4

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +|...++||+|+||.||++... +++.||||.+.+.   .....+.+.+|+.+|.+++|||||++++++...+..+||||
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE  112 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS  112 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4777899999999999999975 4889999999653   22335679999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       113 y  113 (311)
T 4aw0_A          113 Y  113 (311)
T ss_dssp             C
T ss_pred             c
Confidence            8

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.31  E-value=4.7e-12  Score=116.63  Aligned_cols=75  Identities=29%  Similarity=0.389  Sum_probs=62.9

Q ss_pred             cccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEEEE
Q 044262          325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLLIY  397 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~  397 (399)
                      ...++||+|+||.||+|.... +..||+|.+...  .....+.|.+|+.+|++++|||||++++++..    .+.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            445789999999999999754 789999999653  44455679999999999999999999999865    24589999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       109 Ey  110 (290)
T 3fpq_A          109 EL  110 (290)
T ss_dssp             EC
T ss_pred             eC
Confidence            98

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.30  E-value=2.7e-12  Score=119.41  Aligned_cols=75  Identities=23%  Similarity=0.475  Sum_probs=58.9

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----eEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT----ERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv~E  398 (399)
                      .+...++||+|+||.||+|.+ +|+.||||+++..... ...+..|+..+.+++|||||+++|++..++    +++||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            356678999999999999998 6899999999654321 222344555667899999999999998653    5899999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 y   82 (303)
T 3hmm_A           82 Y   82 (303)
T ss_dssp             C
T ss_pred             C
Confidence            8

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.29  E-value=4.5e-12  Score=117.50  Aligned_cols=77  Identities=25%  Similarity=0.402  Sum_probs=63.0

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC---------
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT---------  391 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---------  391 (399)
                      +|+..+.||+|+||.||++... +|+.||||.++.. .....+.+.+|+.+|++++|||||++++++...+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            4677899999999999999975 5889999999754 3344567999999999999999999999987543         


Q ss_pred             ---eEEEEEeC
Q 044262          392 ---ERLLIYEF  399 (399)
Q Consensus       392 ---~~~lv~Ey  399 (399)
                         .++|||||
T Consensus        86 ~~~~l~ivmE~   96 (299)
T 4g31_A           86 PKVYLYIQMQL   96 (299)
T ss_dssp             -CEEEEEEEEC
T ss_pred             CCcEEEEEEec
Confidence               36899998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.25  E-value=5.1e-12  Score=118.60  Aligned_cols=74  Identities=24%  Similarity=0.320  Sum_probs=64.4

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.|...++||+|+||.||++... .|+.||||.++...     .+.+|+.+|.+++|||||++++++..++.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            345677789999999999999975 48999999997542     235799999999999999999999999999999998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.20  E-value=2.8e-11  Score=116.59  Aligned_cols=78  Identities=17%  Similarity=0.401  Sum_probs=66.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------Ce
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~  392 (399)
                      ++|...++||+|+||.||++... .|+.||||+++..  .....+.+++|+.+|+.++|||||++++++...      +.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            45778899999999999999974 5899999999754  334456789999999999999999999987542      56


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      ++|||||
T Consensus       134 ~~ivmE~  140 (398)
T 4b99_A          134 VYVVLDL  140 (398)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            8999998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.17  E-value=5.8e-12  Score=116.69  Aligned_cols=78  Identities=28%  Similarity=0.329  Sum_probs=60.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++|...++||+|+||.||++...    .++.||||.+++..  ......+.+|+.+|.+++|||||++++++..++..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            45788899999999999999852    36789999997542  2223468899999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       104 vmEy  107 (304)
T 3ubd_A          104 ILDF  107 (304)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            9998

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.17  E-value=5.5e-11  Score=120.03  Aligned_cols=78  Identities=26%  Similarity=0.426  Sum_probs=71.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++..+ .|+.||+|.+........+.+.+|+.+|..++|||||+|++++...+.++|||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            46788899999999999999975 4899999999877666677899999999999999999999999999999999998

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.17  E-value=2.4e-11  Score=113.62  Aligned_cols=89  Identities=39%  Similarity=0.654  Sum_probs=78.3

Q ss_pred             ccChhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          311 QFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       311 ~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      .+++.++...+++|...+.||+|+||.||++..+++..||||.+........+.+.+|+.++..++||||+++++++...
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            34556667788899999999999999999999878999999998776656667899999999999999999999999988


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..++||||
T Consensus       108 ~~~~lv~e~  116 (321)
T 2qkw_B          108 NEMILIYKY  116 (321)
T ss_dssp             TCCEEEEEC
T ss_pred             CeEEEEEEc
Confidence            999999997

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.11  E-value=2e-10  Score=107.57  Aligned_cols=89  Identities=26%  Similarity=0.354  Sum_probs=74.6

Q ss_pred             ccChhhHHhhcCC----------CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCC
Q 044262          311 QFDFSTIRDATNN----------FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN  379 (399)
Q Consensus       311 ~~~~~~l~~~~~~----------~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n  379 (399)
                      .++++++..+++.          |...++||+|+||.||++... +|+.||||.+........+.+.+|+.++.+++|||
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            3455666555543          455678999999999999986 58999999998765556678999999999999999


Q ss_pred             ccceeEEEEeCCeEEEEEeC
Q 044262          380 LVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       380 iv~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+++++++...+..+|||||
T Consensus       104 iv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECC
T ss_pred             cceEEEEEEECCEEEEEEec
Confidence            99999999999999999997

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.10  E-value=5.7e-11  Score=111.25  Aligned_cols=91  Identities=48%  Similarity=0.847  Sum_probs=78.7

Q ss_pred             ccccChhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          309 SLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       309 ~~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      ...+++.++....++|...++||+|+||.||++...+++.||||.+..... .....+.+|+.++..++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            446788999999999999999999999999999987899999999976432 2233689999999999999999999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      ...+..++||||
T Consensus        97 ~~~~~~~lv~e~  108 (326)
T 3uim_A           97 MTPTERLLVYPY  108 (326)
T ss_dssp             CCSSCCEEEEEC
T ss_pred             ecCCceEEEEEe
Confidence            988999999997

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.08  E-value=3.9e-10  Score=104.73  Aligned_cols=78  Identities=23%  Similarity=0.427  Sum_probs=70.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... ++..||+|.+........+.|.+|+.++.+++||||+++++++..++..++||||
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            45677899999999999999985 4889999999777777778899999999999999999999999999999999997

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.07  E-value=6.3e-11  Score=115.75  Aligned_cols=87  Identities=18%  Similarity=0.260  Sum_probs=72.8

Q ss_pred             ChhhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 044262          313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSF  388 (399)
Q Consensus       313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~  388 (399)
                      .+.++....++|...++||+|+||.||++.... ++.||+|.+.+...   .....+.+|..++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            345566677889999999999999999999865 78899999965311   11224889999999999999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      ..+..+|||||
T Consensus       145 ~~~~~~lV~Ey  155 (437)
T 4aw2_A          145 DDNNLYLVMDY  155 (437)
T ss_dssp             CSSEEEEEECC
T ss_pred             eCCEEEEEEec
Confidence            99999999997

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.05  E-value=5.6e-10  Score=103.43  Aligned_cols=90  Identities=41%  Similarity=0.755  Sum_probs=78.0

Q ss_pred             ccccChhhHHhhcCCCccc------CcccccCceEEEEEEEcCCcEEEEEEecCC----ChhhHHHHHHHHHHHhcCCCC
Q 044262          309 SLQFDFSTIRDATNNFSTD------NKLGQGGFGAVYKGRLSHGQEIAVKRLSKN----SVQGELEFKNEVLLVARLQHR  378 (399)
Q Consensus       309 ~~~~~~~~l~~~~~~~~~~------~~iG~G~fG~Vykg~~~~g~~vavK~l~~~----~~~~~~~f~~E~~~l~~l~H~  378 (399)
                      ...+++.++..++.+|...      ++||+|+||.||++.. +++.||||.+...    .....+.+.+|+.++.+++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            4567888999999998877      8999999999999987 6889999998653    223456799999999999999


Q ss_pred             CccceeEEEEeCCeEEEEEeC
Q 044262          379 NLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       379 niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ||+++++++...+..++||||
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~  111 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVY  111 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEEC
T ss_pred             CeEEEEEEEecCCceEEEEEe
Confidence            999999999988899999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.02  E-value=5.3e-10  Score=106.34  Aligned_cols=79  Identities=19%  Similarity=0.316  Sum_probs=67.0

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~  393 (399)
                      ...+.|...++||+|+||.||++..+    .++.||+|.+....  ....+.+|+++|..+ +|||||++++++...+..
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            34567888999999999999999753    35789999986543  234688999999988 699999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        96 ~lvmE~  101 (361)
T 4f9c_A           96 VIAMPY  101 (361)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            999998

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.02  E-value=7.8e-10  Score=102.28  Aligned_cols=79  Identities=25%  Similarity=0.444  Sum_probs=69.4

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.|...++||+|+||.||++.. .+++.||||.+........+.+.+|+.++..++||||+++++++..++..+|||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            35678889999999999999986 45889999998765444566799999999999999999999999999999999997

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.02  E-value=4.1e-10  Score=104.82  Aligned_cols=84  Identities=27%  Similarity=0.477  Sum_probs=71.2

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      .++....++|...++||+|+||.||++.. .+..||||.+...  .....+.|.+|+.++.+++||||+++++++...+.
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            34445566788889999999999999987 6889999999765  33445679999999999999999999999998889


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus       109 ~~lv~e~  115 (309)
T 3p86_A          109 LSIVTEY  115 (309)
T ss_dssp             CEEEEEC
T ss_pred             eEEEEec
Confidence            9999997

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.01  E-value=4.9e-10  Score=104.34  Aligned_cols=79  Identities=28%  Similarity=0.475  Sum_probs=67.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .++|...++||+|+||.||++...+++.||+|++....  ......+.+|+.++.+++||||+++++++...+..+||||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            45678889999999999999999889999999996542  2234578999999999999999999999998899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       100 ~  100 (311)
T 3niz_A          100 F  100 (311)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.01  E-value=2.2e-10  Score=109.82  Aligned_cols=83  Identities=24%  Similarity=0.449  Sum_probs=70.9

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +....++|...+.||+|+||.||+|... +++.||||.++.. .....+.|.+|+.+|.+++||||++++|++...+..+
T Consensus       109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  188 (377)
T 3cbl_A          109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY  188 (377)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence            3344567788899999999999999986 5889999998754 3334457999999999999999999999998888899


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       189 lv~e~  193 (377)
T 3cbl_A          189 IVMEL  193 (377)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99997

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.01  E-value=9.1e-10  Score=103.44  Aligned_cols=79  Identities=27%  Similarity=0.400  Sum_probs=69.5

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++|...+.||+|+||.||++.. ..|+.||||.+...  .....+.+.+|+.+|..++||||+++++++...+..+|||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45688889999999999999997 46899999999654  4445567899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        94 e~   95 (328)
T 3fe3_A           94 EY   95 (328)
T ss_dssp             CC
T ss_pred             EC
Confidence            97

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.00  E-value=1.2e-09  Score=100.60  Aligned_cols=78  Identities=12%  Similarity=0.100  Sum_probs=68.2

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|...+.||+|+||.||++.... ++.||||.+....   ....+.|.+|+..+.+++||||+++++++...+..+|||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            456777999999999999999854 8899999997642   334468999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       111 e~  112 (286)
T 3uqc_A          111 EW  112 (286)
T ss_dssp             EC
T ss_pred             Ee
Confidence            97

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.00  E-value=4.3e-10  Score=110.53  Aligned_cols=83  Identities=27%  Similarity=0.388  Sum_probs=71.9

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++...++|...++||+|+||.||+|.++++..||||.++... ...+.|.+|+.+|.+++|||||++++++. .+..+
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~  258 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY  258 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence            44556677888899999999999999999888899999997643 34668999999999999999999999985 66789


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       259 lv~e~  263 (454)
T 1qcf_A          259 IITEF  263 (454)
T ss_dssp             EEECC
T ss_pred             EEEee
Confidence            99997

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.00  E-value=1.2e-09  Score=100.52  Aligned_cols=78  Identities=26%  Similarity=0.473  Sum_probs=67.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...++||+|+||.||++... +++.||+|.+...  .......+.+|+.++.+++||||+++++++..++..+||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            35677899999999999999985 4889999999754  23334678999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (292)
T 3o0g_A           82 F   82 (292)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.00  E-value=4e-10  Score=107.79  Aligned_cols=79  Identities=28%  Similarity=0.532  Sum_probs=68.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ..+|...++||+|+||.||+|...    .+..||||.++.. .....+.|.+|+.+|.+++||||+++++++...+..+|
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            346788899999999999999875    4678999999765 44456689999999999999999999999998889999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       124 v~e~  127 (373)
T 2qol_A          124 VTEY  127 (373)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.99  E-value=8.3e-10  Score=103.21  Aligned_cols=70  Identities=26%  Similarity=0.444  Sum_probs=58.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      ++|...+.||+|+||.||++... +++.||||++.... ....+.+.+|+.+|.+++||||+++++++.+.+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            35677899999999999999986 58999999997543 334567999999999999999999999986643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.99  E-value=6.6e-10  Score=102.14  Aligned_cols=78  Identities=23%  Similarity=0.441  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++....++.||+|.+.....  .....+.+|+.++.+++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            35677899999999999999987789999999965432  2235789999999999999999999999999999999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.98  E-value=1.1e-09  Score=104.85  Aligned_cols=74  Identities=28%  Similarity=0.457  Sum_probs=61.9

Q ss_pred             ccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          326 TDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       326 ~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ..++||+|+||.||++... +|+.||+|.++.......+.+.+|+.+|.+++||||+++++++...+..+|||||
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  167 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY  167 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            3578999999999999874 5889999999877666677899999999999999999999999999999999997

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.98  E-value=7.8e-10  Score=103.67  Aligned_cols=78  Identities=24%  Similarity=0.486  Sum_probs=67.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      +.|...++||+|+||.||++...    .+..||||.++.. .....+.|.+|+.++.+++||||+++++++..++..+||
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            45677899999999999999984    3456999999765 445566899999999999999999999999888889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       129 ~e~  131 (325)
T 3kul_A          129 TEY  131 (325)
T ss_dssp             EEC
T ss_pred             eeC
Confidence            997

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.97  E-value=9.8e-10  Score=99.81  Aligned_cols=77  Identities=27%  Similarity=0.524  Sum_probs=68.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++...++..||+|.+..... ..+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            45777899999999999999998888999999976432 345799999999999999999999999988899999997

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.96  E-value=3.9e-10  Score=112.02  Aligned_cols=82  Identities=30%  Similarity=0.502  Sum_probs=70.9

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++....+|...++||+|+||.||+|.... +..||||.++... ...++|.+|+.+|.+++|||||++++++...+..+|
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            34445667788999999999999999865 7899999997643 345689999999999999999999999998889999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       294 v~E~  297 (495)
T 1opk_A          294 ITEF  297 (495)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.96  E-value=5.8e-10  Score=105.72  Aligned_cols=90  Identities=26%  Similarity=0.397  Sum_probs=74.2

Q ss_pred             cccChhhHHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCcc
Q 044262          310 LQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLV  381 (399)
Q Consensus       310 ~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv  381 (399)
                      ..+....++...++|...++||+|+||.||++...      .++.||||.++.. .....+.+.+|++++.++ +||||+
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv   89 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   89 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence            34556677778889999999999999999999842      3578999999765 334456799999999999 899999


Q ss_pred             ceeEEEEeCC-eEEEEEeC
Q 044262          382 RLLGFSFEGT-ERLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~~-~~~lv~Ey  399 (399)
                      ++++++...+ ..++||||
T Consensus        90 ~~~~~~~~~~~~~~iv~e~  108 (359)
T 3vhe_A           90 NLLGACTKPGGPLMVIVEF  108 (359)
T ss_dssp             CEEEEECSTTSCCEEEEEC
T ss_pred             eeeeeeecCCCceEEEEEe
Confidence            9999988754 48999997

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.96  E-value=8.8e-10  Score=103.73  Aligned_cols=84  Identities=30%  Similarity=0.529  Sum_probs=71.4

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSF  388 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~  388 (399)
                      .+....++|...+.||+|+||.||++....      ++.||||.++.. .....+.|.+|+.++.+++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            344456778888999999999999999743      378999999765 3444567999999999999999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      ..+..+|||||
T Consensus       121 ~~~~~~lv~e~  131 (343)
T 1luf_A          121 VGKPMCLLFEY  131 (343)
T ss_dssp             SSSSCEEEEEC
T ss_pred             cCCceEEEEec
Confidence            88899999997

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.96  E-value=9.8e-10  Score=99.68  Aligned_cols=78  Identities=27%  Similarity=0.441  Sum_probs=68.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++|...+.||+|+||.||++...++..||+|.+..... ..+++.+|+.++.+++||||+++++++...+..++||||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            456777899999999999999998888999999976532 345799999999999999999999999888889999997

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.95  E-value=9.9e-10  Score=100.49  Aligned_cols=82  Identities=27%  Similarity=0.436  Sum_probs=67.9

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      +....++|...+.||+|+||.||++...++..||+|.+..... ..+++.+|+.++.+++|+||+++++++...+..++|
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             TBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             ccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence            3344566778899999999999999998888999999976532 345799999999999999999999999888899999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        98 ~e~  100 (283)
T 3gen_A           98 TEY  100 (283)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            997

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.95  E-value=1.1e-09  Score=107.41  Aligned_cols=78  Identities=28%  Similarity=0.498  Sum_probs=67.3

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-eEEEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-ERLLIY  397 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~  397 (399)
                      ...++|...++||+|+||.||+|.+ .++.||||.++...  ..+.|.+|+.+|.+++|||||++++++...+ ..+|||
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            3456677889999999999999998 47899999997653  3457999999999999999999999988765 789999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       267 e~  268 (450)
T 1k9a_A          267 EY  268 (450)
T ss_dssp             EC
T ss_pred             Ee
Confidence            97

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.95  E-value=7.8e-10  Score=110.94  Aligned_cols=83  Identities=25%  Similarity=0.428  Sum_probs=70.7

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++...+.|...++||+|+||.||+|.+.++..||||.++... ...++|.+|+.+|.+++|+|||++++++.. +..+
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~  337 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY  337 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence            34455667788889999999999999999877889999997643 235689999999999999999999999865 6789


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       338 lv~e~  342 (535)
T 2h8h_A          338 IVTEY  342 (535)
T ss_dssp             EEECC
T ss_pred             Eeeeh
Confidence            99997

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.94  E-value=2.3e-09  Score=103.07  Aligned_cols=78  Identities=26%  Similarity=0.384  Sum_probs=70.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... +++.+|+|.+..........+.+|+.+|..++||||+++++++......+|||||
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            46778899999999999999975 4789999999876655566899999999999999999999999999999999997

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.94  E-value=7.6e-10  Score=108.67  Aligned_cols=83  Identities=25%  Similarity=0.428  Sum_probs=70.4

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++...+.|...++||+|+||.||+|..+++..||||.++... ...+.|.+|+.+|.+++||||+++++++.. +..+
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~  254 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY  254 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence            33445667788889999999999999999877889999997643 235689999999999999999999999865 6789


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       255 iv~e~  259 (452)
T 1fmk_A          255 IVTEY  259 (452)
T ss_dssp             EEECC
T ss_pred             EEehh
Confidence            99997

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.94  E-value=1.6e-09  Score=101.40  Aligned_cols=78  Identities=24%  Similarity=0.420  Sum_probs=65.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... +++.||||.+..... ...+.+.+|+.++..++||||+++++++..++..+|||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            56778899999999999999876 588999999865432 2345689999999999999999999999999999999997

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.94  E-value=1.4e-09  Score=99.10  Aligned_cols=78  Identities=26%  Similarity=0.408  Sum_probs=68.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++.... +..+|+|.+........+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            457778999999999999999854 678999999765445567899999999999999999999999999999999997

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.94  E-value=1.7e-09  Score=102.38  Aligned_cols=77  Identities=27%  Similarity=0.465  Sum_probs=66.6

Q ss_pred             CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .|...+.||+|+||.||++.. .+++.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..+||||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            366678999999999999986 458899999997542   2334579999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       135 ~  135 (348)
T 1u5q_A          135 Y  135 (348)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.94  E-value=1.1e-09  Score=101.02  Aligned_cols=78  Identities=29%  Similarity=0.535  Sum_probs=67.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  394 (399)
                      ++|...++||+|+||.||++.+.     .++.||||++........+.|.+|+.++.+++||||+++++++...  ...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            45677899999999999999852     4789999999877766677899999999999999999999998653  4589


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        90 lv~e~   94 (295)
T 3ugc_A           90 LIMEY   94 (295)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            99997

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.94  E-value=1.9e-09  Score=102.67  Aligned_cols=79  Identities=27%  Similarity=0.453  Sum_probs=68.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++|...+.||+|+||.||++... ++..||+|.+...  .....+.+.+|+.++.+++||||+++++++...+..+|||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            345778899999999999999975 4889999999754  3344567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       108 e~  109 (362)
T 2bdw_A          108 DL  109 (362)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.93  E-value=1.4e-09  Score=101.52  Aligned_cols=78  Identities=31%  Similarity=0.485  Sum_probs=55.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... +++.||+|.++... ....+.+.+|+.++.+++||||+++++++..++..+|||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            46778899999999999999875 48899999997543 22345789999999999999999999999999999999997

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.93  E-value=1.1e-09  Score=104.59  Aligned_cols=80  Identities=23%  Similarity=0.424  Sum_probs=67.9

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ..++|...+.||+|+||.||++...        .+..||||.++.. .....+.+.+|+.+|..+ +||||+++++++..
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  158 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  158 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence            3456778899999999999999862        2457999999765 334456799999999999 89999999999998


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      .+..+|||||
T Consensus       159 ~~~~~lv~e~  168 (370)
T 2psq_A          159 DGPLYVIVEY  168 (370)
T ss_dssp             SSSCEEEEEC
T ss_pred             CCCEEEEEEc
Confidence            8999999997

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.93  E-value=1.3e-09  Score=102.78  Aligned_cols=84  Identities=24%  Similarity=0.349  Sum_probs=70.8

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE  389 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  389 (399)
                      ++....++|...+.||+|+||.||++... .+..||+|.+...     .....+.+.+|+.++..++||||+++++++..
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            34455567888999999999999999875 4788999998643     23345679999999999999999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      .+..+|||||
T Consensus       100 ~~~~~lv~e~  109 (345)
T 3hko_A          100 EQYICLVMEL  109 (345)
T ss_dssp             SSEEEEEEEC
T ss_pred             CCeEEEEEeC
Confidence            9999999997

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.93  E-value=2.5e-09  Score=101.78  Aligned_cols=78  Identities=28%  Similarity=0.399  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh------hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ------GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +.|...++||+|+||.||++... +|+.||+|.++.....      ..+.+.+|+.+|.+++||||+++++++...+..+
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            45777899999999999999985 4889999999764321      3467999999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        92 lv~e~   96 (361)
T 2yab_A           92 LILEL   96 (361)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.93  E-value=4.7e-09  Score=96.43  Aligned_cols=76  Identities=28%  Similarity=0.386  Sum_probs=65.2

Q ss_pred             CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +....+||+|+||.||++... ++..||||.+........+.+.+|+.++..++||||+++++++...+..++||||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            444568999999999999974 4789999999876555567899999999999999999999999999999999997

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.92  E-value=1.4e-09  Score=103.02  Aligned_cols=78  Identities=23%  Similarity=0.331  Sum_probs=66.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +.|...+.||+|+||.||++... +++.||||.+...     .....+.+.+|+.++..++||||+++++++...+..+|
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            34677899999999999999875 4889999998542     11235679999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       104 v~e~  107 (351)
T 3c0i_A          104 VFEF  107 (351)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9997

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.92  E-value=4.2e-09  Score=97.66  Aligned_cols=78  Identities=27%  Similarity=0.454  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...++||+|+||.||++.... ++.||+|.+....  ....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            457778999999999999999854 8899999986542  2335678999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        83 ~   83 (311)
T 4agu_A           83 Y   83 (311)
T ss_dssp             C
T ss_pred             e
Confidence            7

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.91  E-value=1.6e-09  Score=99.41  Aligned_cols=78  Identities=29%  Similarity=0.503  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-C-------cEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-G-------QEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g-------~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ++|...+.||+|+||.||++.... +       ..||+|.+........+.+.+|+.++.+++||||+++++++..++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            456778999999999999998643 3       47999999766556667899999999999999999999999998999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        88 ~lv~e~   93 (289)
T 4fvq_A           88 ILVQEF   93 (289)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            999997

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.91  E-value=3.9e-09  Score=97.33  Aligned_cols=78  Identities=24%  Similarity=0.395  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|...+.||+|+||.||++... .+..||+|.+...   .....+.|.+|+.++.+++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            45778899999999999999864 4889999998543   3344567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        91 e~   92 (294)
T 4eqm_A           91 EY   92 (294)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.91  E-value=1.6e-09  Score=103.33  Aligned_cols=79  Identities=37%  Similarity=0.677  Sum_probs=67.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      .++|...++||+|+||.||++.+.      .+..||||.++.. .......+.+|+.++.+++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            356777899999999999999963      3568999999654 445556799999999999999999999999988889


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus       150 ~lv~e~  155 (367)
T 3l9p_A          150 FILLEL  155 (367)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            999997

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.91  E-value=1.5e-09  Score=100.74  Aligned_cols=82  Identities=27%  Similarity=0.374  Sum_probs=69.5

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      ....++|...+.||+|+||.||++...      ++..||||.+... .....+.+.+|+.++.+++||||+++++++...
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            334567788899999999999999862      3478999999764 344556899999999999999999999999888


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..++||||
T Consensus        99 ~~~~lv~e~  107 (314)
T 2ivs_A           99 GPLLLIVEY  107 (314)
T ss_dssp             SSCEEEEEC
T ss_pred             CceEEEEee
Confidence            899999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.91  E-value=2.6e-09  Score=98.58  Aligned_cols=80  Identities=26%  Similarity=0.455  Sum_probs=67.4

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ..+.|...+.||+|+||.||++.... +..||+|.+........+.+.+|+.++..++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            34567788999999999999999864 88999999977655566789999999999999999999999999899999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        97 ~   97 (302)
T 2j7t_A           97 F   97 (302)
T ss_dssp             C
T ss_pred             e
Confidence            7

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.90  E-value=2.3e-09  Score=99.70  Aligned_cols=78  Identities=31%  Similarity=0.320  Sum_probs=64.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +++.||||++...  .......+..|+..+.++ +|+||+++++++..++..+|||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            46788899999999999999986 5899999998654  333444566777666555 9999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       137 e~  138 (311)
T 3p1a_A          137 EL  138 (311)
T ss_dssp             EC
T ss_pred             ec
Confidence            97

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.90  E-value=2.3e-09  Score=100.53  Aligned_cols=78  Identities=28%  Similarity=0.411  Sum_probs=62.0

Q ss_pred             CCCcccCcccccCceEEEEEEE----cCCcEEEEEEecCCC----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS----VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ++|...++||+|+||.||++..    ..++.||+|.++...    ......+.+|+.+|.+++||||+++++++...+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            5677889999999999999987    368899999997642    22345688999999999999999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        97 ~lv~e~  102 (327)
T 3a62_A           97 YLILEY  102 (327)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            999997

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.90  E-value=8.9e-10  Score=106.68  Aligned_cols=85  Identities=21%  Similarity=0.235  Sum_probs=71.1

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      .+++...++|...++||+|+||.||++.... ++.+|+|.+.+...   .....+.+|+.++..++|||||++++++...
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            4455566788999999999999999999864 78999999965211   1123488999999999999999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..+|||||
T Consensus       142 ~~~~lV~E~  150 (410)
T 3v8s_A          142 RYLYMVMEY  150 (410)
T ss_dssp             SEEEEEECC
T ss_pred             CEEEEEEeC
Confidence            999999997

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.90  E-value=4.6e-09  Score=98.21  Aligned_cols=77  Identities=22%  Similarity=0.352  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...+.||+|+||.||++.... +..+|+|.+.... .....+.+|+.+|..++||||+++++++...+..+|||||
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            567778999999999999999754 7889999987543 3455789999999999999999999999999999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.90  E-value=3.6e-09  Score=107.27  Aligned_cols=78  Identities=29%  Similarity=0.368  Sum_probs=62.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHH---HHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEF---KNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f---~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ++|...++||+|+||.||++.... |+.||+|.+.+..   .......   ..++.++..++|||||++++++...+.++
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            467888999999999999999854 8999999996431   1112223   34467778889999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       269 lVmEy  273 (689)
T 3v5w_A          269 FILDL  273 (689)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            99998

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.90  E-value=1.4e-09  Score=98.63  Aligned_cols=77  Identities=26%  Similarity=0.397  Sum_probs=66.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++.. .+..||||.+...  .....+.|.+|+.++.+++||||+++++++...  +..++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            4577789999999999999998 4889999999764  344456799999999999999999999999876  6789999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        89 e~   90 (271)
T 3kmu_A           89 HW   90 (271)
T ss_dssp             EC
T ss_pred             cc
Confidence            97

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.89  E-value=3.3e-09  Score=99.42  Aligned_cols=78  Identities=28%  Similarity=0.425  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +.|...+.||+|+||.||++... ++..||+|.+.....      ...+.+.+|+.+|.+++||||+++++++...+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            34677899999999999999985 488999999975422      13567999999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        91 lv~e~   95 (326)
T 2y0a_A           91 LILEL   95 (326)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99997

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.89  E-value=1.3e-09  Score=101.64  Aligned_cols=87  Identities=30%  Similarity=0.506  Sum_probs=73.2

Q ss_pred             ChhhHHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeE
Q 044262          313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLG  385 (399)
Q Consensus       313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g  385 (399)
                      ..++++...++|...+.||+|+||.||++...      .+..||+|.+... .......+.+|+.++.+++||||+++++
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   95 (322)
T 1p4o_A           16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG   95 (322)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence            34556667778889999999999999999864      2578999999754 3344567999999999999999999999


Q ss_pred             EEEeCCeEEEEEeC
Q 044262          386 FSFEGTERLLIYEF  399 (399)
Q Consensus       386 ~~~~~~~~~lv~Ey  399 (399)
                      ++...+..++||||
T Consensus        96 ~~~~~~~~~lv~e~  109 (322)
T 1p4o_A           96 VVSQGQPTLVIMEL  109 (322)
T ss_dssp             EECSSSSCEEEEEC
T ss_pred             EEccCCccEEEEEe
Confidence            99888889999997

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.89  E-value=3e-09  Score=98.10  Aligned_cols=78  Identities=22%  Similarity=0.406  Sum_probs=62.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--------------------------hhHHHHHHHHHHHhc
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------------------------QGELEFKNEVLLVAR  374 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--------------------------~~~~~f~~E~~~l~~  374 (399)
                      ++|...+.||+|+||.||++... +++.||||.+.....                          ...+.+.+|+.++.+
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            56778899999999999999875 478999999965421                          112468999999999


Q ss_pred             CCCCCccceeEEEEe--CCeEEEEEeC
Q 044262          375 LQHRNLVRLLGFSFE--GTERLLIYEF  399 (399)
Q Consensus       375 l~H~niv~l~g~~~~--~~~~~lv~Ey  399 (399)
                      ++||||+++++++..  .+..+|||||
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~  119 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFEL  119 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEEC
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEec
Confidence            999999999999986  5678999997

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.89  E-value=3.4e-09  Score=99.34  Aligned_cols=84  Identities=30%  Similarity=0.423  Sum_probs=71.3

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFS  387 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~  387 (399)
                      .++...++|...+.||+|+||.||++....      ...||+|.+... .....+.+.+|+.++..+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            455667788899999999999999998743      247999999765 334456799999999999 899999999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      ...+..+|||||
T Consensus       120 ~~~~~~~lv~e~  131 (333)
T 2i1m_A          120 THGGPVLVITEY  131 (333)
T ss_dssp             CSSSSCEEEEEC
T ss_pred             ecCCceEEEEec
Confidence            988899999997

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.89  E-value=1.9e-09  Score=98.85  Aligned_cols=84  Identities=30%  Similarity=0.493  Sum_probs=71.8

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      .+++...++|...+.||+|+||.||++.... +..||+|.+.... ...+.+.+|+.++..++||||+++++++...+..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            3444556678888999999999999999865 7889999997643 3456799999999999999999999999888889


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus        85 ~~v~e~   90 (288)
T 3kfa_A           85 YIITEF   90 (288)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.89  E-value=4.2e-09  Score=101.16  Aligned_cols=80  Identities=18%  Similarity=0.251  Sum_probs=69.7

Q ss_pred             hcCCCcccCccccc--CceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          320 ATNNFSTDNKLGQG--GFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       320 ~~~~~~~~~~iG~G--~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++|...++||+|  +||.||++... +++.||||.+...  .....+.+.+|+.++..++|||||++++++...+..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34567888999999  99999999986 5899999999754  3444567889999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       103 lv~e~  107 (389)
T 3gni_B          103 VVTSF  107 (389)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99997

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.89  E-value=4.7e-09  Score=95.94  Aligned_cols=79  Identities=27%  Similarity=0.453  Sum_probs=68.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++|...++||+|+||.||++.... ++.||+|.+...  .....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3567788999999999999999754 889999998653  3444567899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        85 e~   86 (284)
T 3kk8_A           85 DL   86 (284)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.89  E-value=2.6e-09  Score=100.64  Aligned_cols=78  Identities=24%  Similarity=0.239  Sum_probs=67.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +++.||+|.+++.   .......+.+|+.+|..++||||+++++++...+..+|||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            45777899999999999999975 4889999999653   2233457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        85 E~   86 (337)
T 1o6l_A           85 EY   86 (337)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.88  E-value=2.2e-09  Score=99.55  Aligned_cols=83  Identities=29%  Similarity=0.419  Sum_probs=70.0

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEE------cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSF  388 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  388 (399)
                      ++...++|...+.||+|+||.||++..      ..++.||||.+.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            344556788889999999999999985      235789999997653 34456799999999999 9999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      .++..+|||||
T Consensus        98 ~~~~~~lv~e~  108 (313)
T 1t46_A           98 IGGPTLVITEY  108 (313)
T ss_dssp             SSSSCEEEEEC
T ss_pred             cCCCcEEEEec
Confidence            88999999997

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.88  E-value=2.1e-09  Score=97.56  Aligned_cols=78  Identities=31%  Similarity=0.506  Sum_probs=62.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCCh----hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV----QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .++|...++||+|+||.||++.. .+..||||.+.....    ...+.+.+|+.++..++||||+++++++...+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            35677889999999999999997 488999999865422    2346789999999999999999999999988889999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        85 ~e~   87 (271)
T 3dtc_A           85 MEF   87 (271)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            997

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.88  E-value=2e-09  Score=97.40  Aligned_cols=77  Identities=27%  Similarity=0.494  Sum_probs=68.1

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++...++..||+|.+..... ..+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            45677899999999999999998888999999976532 346799999999999999999999999888889999997

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.88  E-value=6.6e-09  Score=96.55  Aligned_cols=77  Identities=26%  Similarity=0.297  Sum_probs=66.2

Q ss_pred             CCcc-cCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          323 NFST-DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       323 ~~~~-~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .|.. .++||+|+||.||++... +++.||||.+..........+.+|+.++.++ +||||+++++++...+..+|||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            3444 478999999999999864 5889999999776555567899999999884 799999999999999999999997

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.88  E-value=5.3e-09  Score=98.07  Aligned_cols=78  Identities=27%  Similarity=0.457  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...++||+|+||.||++.... ++.||||.+...  .....+.+.+|+.++.+++||||+++++++...+..+||||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            457778999999999999999864 889999998654  33334568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       105 ~  105 (331)
T 4aaa_A          105 F  105 (331)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.88  E-value=3.2e-09  Score=97.42  Aligned_cols=78  Identities=23%  Similarity=0.342  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... ++..+|+|.+... .....+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            45677899999999999999875 4789999998654 233456899999999999999999999999999999999997

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.88  E-value=2.2e-09  Score=101.21  Aligned_cols=78  Identities=21%  Similarity=0.395  Sum_probs=66.7

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++.. ..++.||+|.+....   ......+.+|+.++..++||||+++++++...+..+|||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4677889999999999999997 458899999986431   112346899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        89 E~   90 (336)
T 3h4j_B           89 EY   90 (336)
T ss_dssp             CC
T ss_pred             EC
Confidence            97

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.88  E-value=2.8e-09  Score=100.00  Aligned_cols=80  Identities=29%  Similarity=0.453  Sum_probs=66.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ..++|...++||+|+||.||++... +++.||||.+.....  ...+.+.+|+.++.+++||||+++++++...+..+||
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            3456788899999999999999864 588999999975432  2245688999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       112 ~e~  114 (329)
T 3gbz_A          112 FEY  114 (329)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            997

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.88  E-value=3.4e-09  Score=98.84  Aligned_cols=78  Identities=29%  Similarity=0.468  Sum_probs=66.1

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--ERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~  397 (399)
                      +.|...++||+|+||.||++.... ++.||||.+.... ....+.+.+|+.++.+++||||+++++++...+  ..+|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            457778999999999999999864 8899999997542 233567899999999999999999999988655  689999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        89 e~   90 (319)
T 4euu_A           89 EF   90 (319)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.87  E-value=3.9e-09  Score=97.66  Aligned_cols=78  Identities=23%  Similarity=0.394  Sum_probs=65.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...+.||+|+||.||++... +++.||+|.+........+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            45677899999999999999975 5889999999866544456789999999999999999999999999999999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.87  E-value=2.3e-09  Score=100.08  Aligned_cols=86  Identities=24%  Similarity=0.467  Sum_probs=62.6

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEcCC----cEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g----~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      ++++....++|...+.||+|+||.||++.....    ..||||.++..  .....+.+.+|+.++.+++||||+++++++
T Consensus        15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            344555667888999999999999999987542    27999999754  334456899999999999999999999999


Q ss_pred             EeCCeE------EEEEeC
Q 044262          388 FEGTER------LLIYEF  399 (399)
Q Consensus       388 ~~~~~~------~lv~Ey  399 (399)
                      ......      ++||||
T Consensus        95 ~~~~~~~~~~~~~~v~e~  112 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPF  112 (323)
T ss_dssp             ECC-------CEEEEEEC
T ss_pred             eccccccCCCccEEEEEe
Confidence            876554      899987

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.87  E-value=2.3e-09  Score=102.83  Aligned_cols=81  Identities=22%  Similarity=0.388  Sum_probs=68.5

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSF  388 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  388 (399)
                      ...++|...++||+|+||.||++...        .+..||||++... .......+.+|++++..+ +||||+++++++.
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  145 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT  145 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence            34567788899999999999999862        2357999999765 344456899999999999 9999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      ..+..+|||||
T Consensus       146 ~~~~~~lv~e~  156 (382)
T 3tt0_A          146 QDGPLYVIVEY  156 (382)
T ss_dssp             SSSSCEEEEEC
T ss_pred             cCCceEEEEEe
Confidence            88899999997

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.87  E-value=2.5e-09  Score=101.23  Aligned_cols=77  Identities=26%  Similarity=0.396  Sum_probs=61.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .+.|...++||+|+||.||++.... ++.||||.++...  ..+.+.+|+.++.+++||||+++++++...+..+|||||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            3567778999999999999999864 7889999997643  235688999999999999999999999999999999997

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.86  E-value=2.5e-09  Score=101.60  Aligned_cols=86  Identities=20%  Similarity=0.296  Sum_probs=71.8

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC-----------hhhHHHHHHHHHHHhcCCCCCccc
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS-----------VQGELEFKNEVLLVARLQHRNLVR  382 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~-----------~~~~~~f~~E~~~l~~l~H~niv~  382 (399)
                      ..++....+.|...++||+|+||.||++...++..||||++....           ....+.+.+|+.++.+++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            456777788999999999999999999998789999999985421           112367999999999999999999


Q ss_pred             eeEEEEeC-----CeEEEEEeC
Q 044262          383 LLGFSFEG-----TERLLIYEF  399 (399)
Q Consensus       383 l~g~~~~~-----~~~~lv~Ey  399 (399)
                      +++++...     ...+|||||
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~  115 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTEL  115 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEEC
T ss_pred             eeeeEEeccCCCcceEEEEEcc
Confidence            99998653     357999997

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.86  E-value=5e-09  Score=97.31  Aligned_cols=78  Identities=22%  Similarity=0.366  Sum_probs=62.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEE------------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF------------  388 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~------------  388 (399)
                      +.|...+.||+|+||.||++.... ++.||+|.+........+.+.+|+.++.+++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            457778999999999999999865 8899999998777666778999999999999999999998873            


Q ss_pred             --eCCeEEEEEeC
Q 044262          389 --EGTERLLIYEF  399 (399)
Q Consensus       389 --~~~~~~lv~Ey  399 (399)
                        .....++||||
T Consensus        91 ~~~~~~~~lv~e~  103 (320)
T 2i6l_A           91 LTELNSVYIVQEY  103 (320)
T ss_dssp             CCSCSEEEEEEEC
T ss_pred             ccccCceeEEeec
Confidence              34678999997

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.86  E-value=4.7e-09  Score=99.85  Aligned_cols=78  Identities=22%  Similarity=0.362  Sum_probs=68.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++|...++||+|+||.||++... .++.||||.+..... ..+.+.+|+.+++.++||||+++++++...+..+|||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            456778899999999999999986 588999999976432 235688999999999999999999999999999999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.86  E-value=5.8e-09  Score=97.58  Aligned_cols=78  Identities=26%  Similarity=0.467  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEE-----cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  394 (399)
                      ++|...+.||+|+||.||++.+     ..+..||||.+........+.+.+|+.++.+++|+||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4567789999999999999985     3478899999988776667789999999999999999999999874  45689


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       103 lv~e~  107 (327)
T 3lxl_A          103 LVMEY  107 (327)
T ss_dssp             EEEEC
T ss_pred             EEEee
Confidence            99997

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.86  E-value=3.7e-09  Score=96.42  Aligned_cols=81  Identities=30%  Similarity=0.425  Sum_probs=68.3

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++...+.|...+.||+|+||.||++...++..||+|.+.... ...+.+.+|+.++.+++||||+++++++. .+..++|
T Consensus         8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   85 (279)
T 1qpc_A            8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII   85 (279)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence            344556788889999999999999998878899999997543 23567999999999999999999999875 5568899


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        86 ~e~   88 (279)
T 1qpc_A           86 TEY   88 (279)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            997

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.85  E-value=8.5e-09  Score=95.59  Aligned_cols=78  Identities=24%  Similarity=0.465  Sum_probs=66.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... ++..||+|.+...   .......+.+|+.++.+++||||+++++++...+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            45777899999999999999974 5889999999753   3445567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       112 e~  113 (310)
T 2wqm_A          112 EL  113 (310)
T ss_dssp             EC
T ss_pred             ec
Confidence            97

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.85  E-value=5.6e-09  Score=99.08  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=69.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... .+..||+|.+... .....+.+.+|+.++.+++||||+++++++..++..+|||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            46778899999999999999986 4889999999765 444456799999999999999999999999999999999997

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.85  E-value=6.2e-09  Score=98.71  Aligned_cols=91  Identities=24%  Similarity=0.242  Sum_probs=76.8

Q ss_pred             cccccChhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-----CCCcc
Q 044262          308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----HRNLV  381 (399)
Q Consensus       308 ~~~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H~niv  381 (399)
                      +...+++.+.....++|...++||+|+||.||++... +++.||||.+... ......+..|+.++..++     ||||+
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            4445666777777788999999999999999999984 5789999999643 344557888999999886     99999


Q ss_pred             ceeEEEEeCCeEEEEEeC
Q 044262          382 RLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++++++...+..+|||||
T Consensus       100 ~~~~~~~~~~~~~lv~e~  117 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEP  117 (360)
T ss_dssp             CEEEEEEETTEEEEEECC
T ss_pred             cccceeeECCeeEEEEcC
Confidence            999999999999999997

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.85  E-value=3.8e-09  Score=99.62  Aligned_cols=79  Identities=20%  Similarity=0.329  Sum_probs=68.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCC--CCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQH--RNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv  396 (399)
                      .+.|...+.||+|+||.||++...+++.||||.+...  .....+.+.+|+.+|.+++|  +||+++++++...+..+||
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4557788999999999999999888899999998654  34445679999999999977  9999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        88 ~e~   90 (343)
T 3dbq_A           88 MEC   90 (343)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            996

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.85  E-value=3e-09  Score=99.91  Aligned_cols=82  Identities=22%  Similarity=0.407  Sum_probs=68.8

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEE
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFS  387 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~  387 (399)
                      ....++|...+.||+|+||.||++...        .+..||||.+... .....+.+.+|+.++..+ +||||+++++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            344567888899999999999999863        3568999999765 344456799999999999 899999999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      ...+..+|||||
T Consensus       111 ~~~~~~~lv~e~  122 (334)
T 2pvf_A          111 TQDGPLYVIVEY  122 (334)
T ss_dssp             CSSSCCEEEEEC
T ss_pred             ccCCceEEEEEC
Confidence            988899999997

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.85  E-value=2.1e-09  Score=104.17  Aligned_cols=86  Identities=20%  Similarity=0.248  Sum_probs=72.1

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFE  389 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  389 (399)
                      +.+.....++|...++||+|+||.||++..+ +++.||+|.+.+...   ...+.+.+|..++..++||||+++++++..
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            4455556788999999999999999999985 589999999965321   122358899999999999999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      .+..+|||||
T Consensus       133 ~~~~~lVmE~  142 (412)
T 2vd5_A          133 ENYLYLVMEY  142 (412)
T ss_dssp             SSEEEEEECC
T ss_pred             CCEEEEEEcC
Confidence            9999999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.85  E-value=6.8e-09  Score=94.76  Aligned_cols=78  Identities=32%  Similarity=0.396  Sum_probs=68.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... +++.||+|.+...  .......+.+|+..+..+ +||||+++++++...+..+|||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            45777899999999999999986 5899999999764  334456789999999998 9999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        91 e~   92 (289)
T 1x8b_A           91 EY   92 (289)
T ss_dssp             EC
T ss_pred             Ee
Confidence            97

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.85  E-value=5.8e-09  Score=96.10  Aligned_cols=78  Identities=31%  Similarity=0.554  Sum_probs=64.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...+.||+|+||.||++... +++.||||.+....  ......+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            45777899999999999999985 58899999986542  2223578999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        83 ~   83 (299)
T 2r3i_A           83 F   83 (299)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.84  E-value=6.5e-09  Score=94.96  Aligned_cols=77  Identities=29%  Similarity=0.448  Sum_probs=66.9

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +|...+.||+|+||.||++... +++.||+|.++....      ...+.+.+|+.++.+++||||+++++++...+..++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            4677899999999999999986 488999999875421      135679999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        86 v~e~   89 (283)
T 3bhy_A           86 ILEL   89 (283)
T ss_dssp             EEEC
T ss_pred             EEee
Confidence            9997

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.84  E-value=7.2e-09  Score=95.30  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++..++|+||+++++++...+..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            456778999999999999999864 788999998653   3344567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        95 e~   96 (294)
T 2rku_A           95 EL   96 (294)
T ss_dssp             EC
T ss_pred             ec
Confidence            97

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.84  E-value=4.5e-09  Score=97.75  Aligned_cols=81  Identities=26%  Similarity=0.350  Sum_probs=67.3

Q ss_pred             hhcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTER  393 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~  393 (399)
                      ...++|...+.||+|+||.||++.. .+++.||||.+........+.+.+|+.++..++||||+++++++..    ....
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            3445688889999999999999997 4588999999977666667789999999999999999999999873    3468


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++|+||
T Consensus       106 ~lv~e~  111 (317)
T 2buj_A          106 WLLLPF  111 (317)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            899997

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.84  E-value=6.2e-09  Score=95.48  Aligned_cols=77  Identities=26%  Similarity=0.485  Sum_probs=63.8

Q ss_pred             CCCcccC-cccccCceEEEEEEEc---CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDN-KLGQGGFGAVYKGRLS---HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~-~iG~G~fG~Vykg~~~---~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      +++...+ .||+|+||.||++...   .+..||||.++.. .....+.+.+|+.++.+++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3444444 8999999999999863   4778999999765 444567899999999999999999999998 56678999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        88 ~e~   90 (287)
T 1u59_A           88 MEM   90 (287)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            997

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.84  E-value=4e-09  Score=103.22  Aligned_cols=78  Identities=24%  Similarity=0.383  Sum_probs=65.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.|...++||+|+||.||++... .|+.+|+|.+....  ....+.+.+|+.+|..++|||||++++++...+..+||||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            45777899999999999999864 58899999997653  3345579999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        91 ~   91 (444)
T 3soa_A           91 L   91 (444)
T ss_dssp             C
T ss_pred             e
Confidence            7

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.84  E-value=5.1e-09  Score=95.54  Aligned_cols=79  Identities=33%  Similarity=0.535  Sum_probs=67.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .++|...+.||+|+||.||++.... +..||+|.+....   ......+.+|+.++..++||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            3567778999999999999998754 6789999986432   12245789999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        88 ~e~   90 (279)
T 3fdn_A           88 LEY   90 (279)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            997

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.84  E-value=7.6e-09  Score=97.81  Aligned_cols=78  Identities=19%  Similarity=0.239  Sum_probs=67.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||++..+. ++.||+|.+.+.   .....+.+.+|..++.++ +||||+++++++...+..+||
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            457778999999999999999864 789999999754   334455688999999887 899999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        89 ~e~   91 (345)
T 3a8x_A           89 IEY   91 (345)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            997

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.84  E-value=1e-08  Score=95.54  Aligned_cols=76  Identities=25%  Similarity=0.407  Sum_probs=64.7

Q ss_pred             CcccCcccccCceEEEEEEEc-----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL  395 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  395 (399)
                      |...++||+|+||.||++.+.     .++.||||.+... .....+.+.+|+.++.+++||||+++++++...  ...+|
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            467799999999999998763     4788999999765 334456799999999999999999999999874  67899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       113 v~e~  116 (318)
T 3lxp_A          113 VMEY  116 (318)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            9997

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.83  E-value=2.6e-09  Score=100.60  Aligned_cols=83  Identities=27%  Similarity=0.400  Sum_probs=68.1

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSF  388 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  388 (399)
                      ++...++|...+.||+|+||.||++...      .+..||||.+... .....+.+.+|+.++.++ +||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            4456678888999999999999999862      3567999999754 223346799999999999 8999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      ..+..+|||||
T Consensus       120 ~~~~~~lv~e~  130 (344)
T 1rjb_A          120 LSGPIYLIFEY  130 (344)
T ss_dssp             SSSSCEEEEEC
T ss_pred             eCCccEEEEec
Confidence            88999999997

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.83  E-value=1.1e-08  Score=94.57  Aligned_cols=78  Identities=21%  Similarity=0.402  Sum_probs=68.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++..++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            45777899999999999999874 48899999997542 34456899999999999999999999999999999999997

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.83  E-value=4e-09  Score=101.17  Aligned_cols=78  Identities=19%  Similarity=0.284  Sum_probs=67.2

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.+|..++|||||++++++...+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            457778999999999999999754 7899999986431   223457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        95 e~   96 (384)
T 4fr4_A           95 DL   96 (384)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.83  E-value=5.7e-09  Score=96.87  Aligned_cols=90  Identities=26%  Similarity=0.411  Sum_probs=72.9

Q ss_pred             cccChhhHHhhcCCCcccCcccccCceEEEEEEE------cCCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCcc
Q 044262          310 LQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLV  381 (399)
Q Consensus       310 ~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~------~~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv  381 (399)
                      ..+....+....++|...+.||+|+||.||++..      ..++.||||.+... .....+.+.+|+.++.++ +||||+
T Consensus        15 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv   94 (316)
T 2xir_A           15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   94 (316)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence            3445566666778899999999999999999985      23578999999765 334456799999999999 799999


Q ss_pred             ceeEEEEeCC-eEEEEEeC
Q 044262          382 RLLGFSFEGT-ERLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~~-~~~lv~Ey  399 (399)
                      ++++++...+ ..++||||
T Consensus        95 ~~~~~~~~~~~~~~lv~e~  113 (316)
T 2xir_A           95 NLLGACTKPGGPLMVIVEF  113 (316)
T ss_dssp             CEEEEECCTTSCCEEEEEC
T ss_pred             eEEEEEecCCCceEEEEEc
Confidence            9999987654 48999997

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.83  E-value=4.5e-09  Score=98.24  Aligned_cols=78  Identities=24%  Similarity=0.399  Sum_probs=67.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +|+.||+|.+++..   ....+.+.+|+.++..++||||+++++++...+..+|||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            45777899999999999999985 58899999996531   123457889999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        86 e~   87 (318)
T 1fot_A           86 DY   87 (318)
T ss_dssp             CC
T ss_pred             eC
Confidence            97

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.83  E-value=4.1e-09  Score=98.51  Aligned_cols=78  Identities=24%  Similarity=0.397  Sum_probs=64.3

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----eEEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT----ERLL  395 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~l  395 (399)
                      ..++|...++||+|+||.||++... ++.||||++.... .....+.+|+.++.+++|||||++++++....    ..+|
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3456788899999999999999884 7899999996543 23345677999999999999999999998743    4799


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       100 v~e~  103 (322)
T 3soc_A          100 ITAF  103 (322)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9997

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.83  E-value=7.9e-09  Score=97.11  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=67.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ..|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++..++|+||+++++++...+..+|||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            346677899999999999999864 788999998653   3345567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       121 e~  122 (335)
T 2owb_A          121 EL  122 (335)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.83  E-value=7.9e-09  Score=93.95  Aligned_cols=78  Identities=26%  Similarity=0.439  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++..++||||+++++++..++..++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            45677899999999999999985 5889999998643 233456799999999999999999999999999999999997

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.83  E-value=4.1e-09  Score=97.91  Aligned_cols=92  Identities=30%  Similarity=0.470  Sum_probs=67.4

Q ss_pred             cccccChhhHHhhcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCcc
Q 044262          308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLV  381 (399)
Q Consensus       308 ~~~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv  381 (399)
                      +.....+.++....++|...+.||+|+||.||++....    +..||+|.+...  .....+.+.+|+.++.+++||||+
T Consensus        20 eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   99 (313)
T 3brb_A           20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI   99 (313)
T ss_dssp             ----CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             HhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCee
Confidence            33444556666677788889999999999999998743    347999998754  344456799999999999999999


Q ss_pred             ceeEEEEeCCe-----EEEEEeC
Q 044262          382 RLLGFSFEGTE-----RLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~~~-----~~lv~Ey  399 (399)
                      ++++++...+.     .++||||
T Consensus       100 ~~~~~~~~~~~~~~~~~~~v~e~  122 (313)
T 3brb_A          100 RLLGVCIEMSSQGIPKPMVILPF  122 (313)
T ss_dssp             CCCEEEEC-------CEEEEEEC
T ss_pred             eeeEEEeeccccCCcccEEEEec
Confidence            99999876543     4899987

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.82  E-value=7.3e-09  Score=96.69  Aligned_cols=78  Identities=28%  Similarity=0.398  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +.|...+.||+|+||.||++... +++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++...+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            45777899999999999999975 488999999975422      13567999999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        92 lv~e~   96 (321)
T 2a2a_A           92 LILEL   96 (321)
T ss_dssp             EEECC
T ss_pred             EEEEc
Confidence            99997

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.82  E-value=4.9e-09  Score=102.95  Aligned_cols=78  Identities=18%  Similarity=0.394  Sum_probs=57.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  393 (399)
                      ++|...++||+|+||.||++... .++.||||++...  .....+.+.+|+.+|.+++|||||++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            56888899999999999999875 5889999999653  334456799999999999999999999998543     468


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus       133 ~lv~e~  138 (458)
T 3rp9_A          133 YVVLEI  138 (458)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999997

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.82  E-value=7.6e-09  Score=95.41  Aligned_cols=78  Identities=31%  Similarity=0.456  Sum_probs=63.1

Q ss_pred             CCCcccCcccccCceEEEEEEE-----cCCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  393 (399)
                      ..|...++||+|+||.||++.+     ..++.||+|.+... .....+.+.+|+.++..++||||+++++++...  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3467789999999999999985     35789999999754 333456799999999999999999999999876  568


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus       101 ~lv~e~  106 (302)
T 4e5w_A          101 KLIMEF  106 (302)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            999997

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.82  E-value=7.3e-09  Score=97.29  Aligned_cols=78  Identities=27%  Similarity=0.510  Sum_probs=66.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ..|...+.||+|+||.||++....     +..||||.++.. .......+.+|+.++.+++||||+++++++...+..+|
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            456667899999999999998743     235999999765 34445679999999999999999999999988889999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       124 v~e~  127 (333)
T 1mqb_A          124 ITEY  127 (333)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9997

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.82  E-value=6.3e-09  Score=94.81  Aligned_cols=78  Identities=27%  Similarity=0.490  Sum_probs=66.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... +++.||+|.+.....   ...+.+.+|+.++.+++||||+++++++...+..+|||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            45777899999999999999974 588999999964321   22457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        91 e~   92 (278)
T 3cok_A           91 EM   92 (278)
T ss_dssp             EC
T ss_pred             ec
Confidence            97

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.81  E-value=1.3e-08  Score=92.78  Aligned_cols=78  Identities=23%  Similarity=0.381  Sum_probs=66.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv  396 (399)
                      ++|...+.||+|+||.||++... +++.||+|.+...  .....+.+.+|+.++.+++||||+++++++..  ....++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            46777899999999999999985 5889999999754  34445679999999999999999999998865  5678999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        86 ~e~   88 (279)
T 2w5a_A           86 MEY   88 (279)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.81  E-value=6.8e-09  Score=100.01  Aligned_cols=78  Identities=29%  Similarity=0.468  Sum_probs=66.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--ERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~  397 (399)
                      +.|...++||+|+||.||++.... ++.||||.+.... ....+.+.+|++++.+++||||+++++++...+  ..+|||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            457778999999999999999864 8899999997542 233567889999999999999999999988654  679999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        89 e~   90 (396)
T 4eut_A           89 EF   90 (396)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.81  E-value=1e-08  Score=102.03  Aligned_cols=79  Identities=27%  Similarity=0.388  Sum_probs=65.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh-------------hhHHHHHHHHHHHhcCCCCCccceeEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-------------QGELEFKNEVLLVARLQHRNLVRLLGF  386 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~niv~l~g~  386 (399)
                      .+.|...++||+|+||.||++.... +..||+|.+.....             ...+.+.+|+.+|.+++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            3567778999999999999999854 78999999975421             234578999999999999999999999


Q ss_pred             EEeCCeEEEEEeC
Q 044262          387 SFEGTERLLIYEF  399 (399)
Q Consensus       387 ~~~~~~~~lv~Ey  399 (399)
                      +......+|||||
T Consensus       115 ~~~~~~~~lv~e~  127 (504)
T 3q5i_A          115 FEDKKYFYLVTEF  127 (504)
T ss_dssp             EECSSEEEEEEEC
T ss_pred             EEcCCEEEEEEec
Confidence            9999999999997

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.81  E-value=6.2e-09  Score=98.63  Aligned_cols=78  Identities=23%  Similarity=0.301  Sum_probs=67.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... +++.||+|.+....   ....+.+.+|+.+|..++||||+++++++...+..+|||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            45777899999999999999985 48899999996532   123457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       121 e~  122 (350)
T 1rdq_E          121 EY  122 (350)
T ss_dssp             EC
T ss_pred             cC
Confidence            97

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.81  E-value=8.4e-09  Score=93.83  Aligned_cols=78  Identities=23%  Similarity=0.427  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... +++.||||.+....   ....+.+.+|+.++..++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            56777899999999999999986 58899999986532   123457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        91 e~   92 (276)
T 2h6d_A           91 EY   92 (276)
T ss_dssp             EC
T ss_pred             ec
Confidence            97

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.81  E-value=6.9e-09  Score=94.85  Aligned_cols=80  Identities=23%  Similarity=0.359  Sum_probs=65.7

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ...++|...+.||+|+||.||++....    +..||+|.+... .....+.+.+|+.++.+++||||+++++++ ..+..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCcc
Confidence            344567788999999999999998743    457999998764 344456799999999999999999999997 45678


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus        91 ~lv~e~   96 (281)
T 1mp8_A           91 WIIMEL   96 (281)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999997

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.81  E-value=6.2e-09  Score=106.05  Aligned_cols=76  Identities=26%  Similarity=0.461  Sum_probs=62.5

Q ss_pred             CCcccC-cccccCceEEEEEEEc---CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          323 NFSTDN-KLGQGGFGAVYKGRLS---HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       323 ~~~~~~-~iG~G~fG~Vykg~~~---~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++...+ +||+|+||.||+|.+.   ++..||||.++.. .....++|.+|+.+|.+++|||||++++++.. +..+|||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            333334 7999999999999874   3567999999765 33456789999999999999999999999865 6689999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       415 E~  416 (613)
T 2ozo_A          415 EM  416 (613)
T ss_dssp             EC
T ss_pred             Ee
Confidence            97

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.80  E-value=6.2e-09  Score=103.32  Aligned_cols=78  Identities=27%  Similarity=0.391  Sum_probs=63.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.|...++||+|+||.||++... .+..||+|.+....  ......+.+|+.++..++|||||++++++......+||||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            34677899999999999999985 47899999997642  2334579999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       117 ~  117 (494)
T 3lij_A          117 C  117 (494)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.80  E-value=6.5e-09  Score=97.27  Aligned_cols=80  Identities=36%  Similarity=0.669  Sum_probs=65.8

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      ..++|...+.||+|+||.||++...      .+..||||.+... .......+.+|+.++.+++||||+++++++...+.
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            3456888899999999999999842      3678999999754 44556689999999999999999999999998888


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|||||
T Consensus       108 ~~lv~e~  114 (327)
T 2yfx_A          108 RFILMEL  114 (327)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEec
Confidence            9999997

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.80  E-value=1.3e-08  Score=94.43  Aligned_cols=78  Identities=19%  Similarity=0.296  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            56778899999999999999975 5789999998754   2233467999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       114 e~  115 (309)
T 2h34_A          114 RL  115 (309)
T ss_dssp             EC
T ss_pred             Ee
Confidence            97

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.80  E-value=7.7e-09  Score=98.09  Aligned_cols=79  Identities=27%  Similarity=0.323  Sum_probs=67.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  395 (399)
                      .++|...++||+|+||.||++.... ++.||||.+++.   .....+.+.+|..++..+ +||||+++++++...+..+|
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            3568888999999999999999754 889999999753   223345688999999988 79999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       102 v~E~  105 (353)
T 3txo_A          102 VMEF  105 (353)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9997

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.80  E-value=6.9e-09  Score=97.06  Aligned_cols=78  Identities=29%  Similarity=0.533  Sum_probs=66.1

Q ss_pred             CCCcccCcccccCceEEEEEEE-----cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--ERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~  394 (399)
                      ++|...+.||+|+||.||++.+     ..++.||||.+........+.+.+|+.++.+++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4567789999999999999985     357899999998776666778999999999999999999999986543  678


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       121 lv~e~  125 (326)
T 2w1i_A          121 LIMEY  125 (326)
T ss_dssp             EEECC
T ss_pred             EEEEC
Confidence            99997

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.80  E-value=1.9e-08  Score=94.06  Aligned_cols=79  Identities=19%  Similarity=0.334  Sum_probs=65.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++|...+.||+|+||.||++... +++.||||.+... .......+..|+. ++..++||||+++++++...+..+|||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            456778899999999999999985 5889999999765 3344456777776 777889999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       101 e~  102 (327)
T 3aln_A          101 EL  102 (327)
T ss_dssp             CC
T ss_pred             ee
Confidence            97

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.80  E-value=9.3e-09  Score=98.86  Aligned_cols=78  Identities=21%  Similarity=0.332  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCC--CCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQ--HRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ..|...++||+|+||.||++....++.||||.+...  .....+.+.+|+.+|.+++  |+||+++++++...+..+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            347788999999999999999877899999998654  3445578999999999996  599999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       136 E~  137 (390)
T 2zmd_A          136 EC  137 (390)
T ss_dssp             EC
T ss_pred             ec
Confidence            95

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.80  E-value=1.4e-08  Score=93.36  Aligned_cols=79  Identities=20%  Similarity=0.240  Sum_probs=67.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---------hhhHHHHHHHHHHHhcCC-CCCccceeEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---------VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFE  389 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~  389 (399)
                      .++|...+.||+|+||.||++... +++.||||.+....         ....+.+.+|+.++.+++ ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            356778899999999999999985 47899999997542         122456889999999995 9999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      ....+|||||
T Consensus        96 ~~~~~lv~e~  105 (298)
T 1phk_A           96 NTFFFLVFDL  105 (298)
T ss_dssp             SSEEEEEEEC
T ss_pred             CCeEEEEEec
Confidence            9999999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.80  E-value=8.9e-09  Score=100.41  Aligned_cols=79  Identities=19%  Similarity=0.426  Sum_probs=67.3

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Ce
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TE  392 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~  392 (399)
                      .++|...++||+|+||.||++.... ++.||||++...  .....+.+.+|+.+|.+++|+||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            3568888999999999999999754 788999999754  334456799999999999999999999998765     56


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|||||
T Consensus       105 ~~lv~e~  111 (432)
T 3n9x_A          105 LYIVLEI  111 (432)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEec
Confidence            8999997

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.79  E-value=6.5e-09  Score=102.51  Aligned_cols=78  Identities=21%  Similarity=0.437  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... .|+.||||.+.....   .....+.+|+.+|..++||||+++++++...+..+|||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            45777899999999999999985 589999999965321   23457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        96 E~   97 (476)
T 2y94_A           96 EY   97 (476)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.79  E-value=4e-09  Score=99.42  Aligned_cols=78  Identities=22%  Similarity=0.346  Sum_probs=67.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhh-----------------HHHHHHHHHHHhcCCCCCccce
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQG-----------------ELEFKNEVLLVARLQHRNLVRL  383 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~-----------------~~~f~~E~~~l~~l~H~niv~l  383 (399)
                      .++|...+.||+|+||.||++.. +++.||+|.+.......                 .+.+.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35678889999999999999999 89999999986431111                 1689999999999999999999


Q ss_pred             eEEEEeCCeEEEEEeC
Q 044262          384 LGFSFEGTERLLIYEF  399 (399)
Q Consensus       384 ~g~~~~~~~~~lv~Ey  399 (399)
                      ++++...+..++||||
T Consensus       109 ~~~~~~~~~~~lv~e~  124 (348)
T 2pml_X          109 EGIITNYDEVYIIYEY  124 (348)
T ss_dssp             SEEEESSSEEEEEEEC
T ss_pred             EEEEeeCCeEEEEEec
Confidence            9999999999999997

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.79  E-value=2.3e-09  Score=100.30  Aligned_cols=78  Identities=27%  Similarity=0.474  Sum_probs=64.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhh-HHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG-ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... +++.||+|.+....... ...+.+|+.++..++||||+++++++...+..+|||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            35677899999999999999986 58899999996543221 12466899999999999999999999999999999997

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.79  E-value=5.3e-09  Score=97.17  Aligned_cols=78  Identities=24%  Similarity=0.333  Sum_probs=64.9

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----eE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT----ER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~  393 (399)
                      +.|...++||+|+||.||++.. .+++.||||.+...   .......+.+|+.++.+++||||+++++++....    ..
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            5677889999999999999996 45889999999764   2333457899999999999999999999987543    34


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        92 ~lv~e~   97 (311)
T 3ork_A           92 YIVMEY   97 (311)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999997

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.78  E-value=6.6e-09  Score=102.30  Aligned_cols=79  Identities=20%  Similarity=0.345  Sum_probs=66.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------T  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~  391 (399)
                      .++|...++||+|+||.||++... .++.||||++...  .....+.+.+|+.+|..++|||||++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            456888899999999999999864 4889999999754  344456799999999999999999999998654      3


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus       141 ~~~lv~E~  148 (464)
T 3ttj_A          141 DVYLVMEL  148 (464)
T ss_dssp             EEEEEEEC
T ss_pred             eEEEEEeC
Confidence            57999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.78  E-value=1.7e-08  Score=94.50  Aligned_cols=70  Identities=29%  Similarity=0.384  Sum_probs=61.9

Q ss_pred             cCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++||+|+||.||++... .++.||||.+...   ....+.+|+.++..+. ||||+++++++......+|||||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~   87 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMEL   87 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEc
Confidence            478999999999999985 4889999999653   3457889999999997 99999999999999999999997

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.78  E-value=1.3e-08  Score=93.37  Aligned_cols=77  Identities=29%  Similarity=0.371  Sum_probs=64.2

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l  395 (399)
                      .|...+.||+|+||.||++... .+..||+|.+...  .....+.+.+|+.++.+++||||+++++++..    ....+|
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            3566788999999999999875 4788999998653  44456679999999999999999999998865    355899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       107 v~e~  110 (290)
T 1t4h_A          107 VTEL  110 (290)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.78  E-value=1.1e-08  Score=93.81  Aligned_cols=78  Identities=27%  Similarity=0.399  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.|...+.||+|+||.||++... +++.||+|.+...  .......+.+|+.++.+++||||+++++++...+..++|+|
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            46778899999999999999985 5889999998653  22345679999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       102 ~  102 (287)
T 2wei_A          102 L  102 (287)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.78  E-value=9.6e-09  Score=94.87  Aligned_cols=78  Identities=28%  Similarity=0.472  Sum_probs=64.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC----hhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS----VQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  394 (399)
                      ++|...+.||+|+||.||++... ++..||+|.+....    ......+.+|+.++.+++|+||+++++++..  ....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            56788899999999999999974 47899999996532    2234679999999999999999999999853  45689


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        85 lv~e~   89 (305)
T 2wtk_C           85 MVMEY   89 (305)
T ss_dssp             EEEEC
T ss_pred             EEehh
Confidence            99997

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.77  E-value=6.6e-09  Score=102.89  Aligned_cols=78  Identities=27%  Similarity=0.399  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.|...++||+|+||.||++... .++.||||.+...  .......+.+|+.+|.+++||||+++++++......++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            45777899999999999999975 5889999998643  12335679999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       102 ~  102 (486)
T 3mwu_A          102 L  102 (486)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.77  E-value=1.7e-08  Score=96.32  Aligned_cols=79  Identities=19%  Similarity=0.333  Sum_probs=66.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  391 (399)
                      .++|...+.||+|+||.||++... .++.||||.+...  .....+.+.+|+.++..++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            356788899999999999999874 4889999999753  3344567899999999999999999999987654      


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus       104 ~~~lv~e~  111 (371)
T 2xrw_A          104 DVYIVMEL  111 (371)
T ss_dssp             EEEEEEEC
T ss_pred             ceEEEEEc
Confidence            68999997

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.77  E-value=1.6e-08  Score=93.85  Aligned_cols=78  Identities=27%  Similarity=0.501  Sum_probs=62.9

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ..+.|...+.||+|+||.||++.... |+.||+|.+....  ..+.+.+|+.++..++||||+++++++...+..+||||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            44567888999999999999999864 8899999997543  23578999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       105 ~  105 (314)
T 3com_A          105 Y  105 (314)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.77  E-value=1.1e-08  Score=101.08  Aligned_cols=78  Identities=31%  Similarity=0.423  Sum_probs=67.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|...++||+|+||.||++... .++.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            45677899999999999999985 58899999996542   234567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       106 e~  107 (484)
T 3nyv_A          106 EV  107 (484)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.77  E-value=7.5e-09  Score=99.67  Aligned_cols=78  Identities=18%  Similarity=0.237  Sum_probs=64.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||++.... ++.+|+|.+++.   .......+.+|..++.++ +|||||++++++...+..+||
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            467788999999999999999864 788999999754   222234588899998876 899999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       132 ~E~  134 (396)
T 4dc2_A          132 IEY  134 (396)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            997

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.77  E-value=6.7e-09  Score=98.07  Aligned_cols=79  Identities=25%  Similarity=0.394  Sum_probs=62.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh-----hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ-----GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      .+.|...+.||+|+||.||++... +++.||||.+......     ..+.+.+|+.++.+++||||+++++++...+..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            456788899999999999999975 4889999998653211     1236889999999999999999999998888999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        89 lv~e~   93 (346)
T 1ua2_A           89 LVFDF   93 (346)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99997

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.77  E-value=1.1e-08  Score=93.91  Aligned_cols=79  Identities=27%  Similarity=0.443  Sum_probs=62.8

Q ss_pred             hcCCCcccC-cccccCceEEEEEEEc---CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          320 ATNNFSTDN-KLGQGGFGAVYKGRLS---HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       320 ~~~~~~~~~-~iG~G~fG~Vykg~~~---~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ..+.|...+ .||+|+||.||++...   .+..||||.++...  ....+.+.+|+.++..++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            344566666 9999999999999653   35789999997542  23356799999999999999999999998 66778


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++||||
T Consensus        93 ~lv~e~   98 (291)
T 1xbb_A           93 MLVMEM   98 (291)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            999997

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.76  E-value=1.2e-08  Score=93.38  Aligned_cols=78  Identities=28%  Similarity=0.500  Sum_probs=66.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++.... +..||+|.+....   ......+.+|+.++..++||||+++++++...+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            457778999999999999999854 7789999986431   122457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        94 e~   95 (284)
T 2vgo_A           94 EF   95 (284)
T ss_dssp             CC
T ss_pred             Ee
Confidence            97

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.76  E-value=8.9e-09  Score=97.33  Aligned_cols=80  Identities=20%  Similarity=0.277  Sum_probs=67.0

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++|...++||+|+||.||++..+ +++.||+|.++...   ......+..|..++..+ +||||+++++++...+..+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            4467888899999999999999986 48899999996531   22345688899988876 9999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        95 lv~E~   99 (345)
T 1xjd_A           95 FVMEY   99 (345)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99997

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.76  E-value=1.3e-08  Score=93.20  Aligned_cols=80  Identities=23%  Similarity=0.323  Sum_probs=63.1

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHH-HHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELE-FKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~-f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ..++|...++||+|+||.||++... +++.||+|.+... ....... +..+...+..++||||+++++++..++..+||
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            3456778899999999999999974 5889999999764 2222333 44445568889999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        85 ~e~   87 (290)
T 3fme_A           85 MEL   87 (290)
T ss_dssp             EEC
T ss_pred             Eeh
Confidence            997

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.76  E-value=8.2e-09  Score=96.57  Aligned_cols=82  Identities=28%  Similarity=0.387  Sum_probs=68.4

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEe------
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFE------  389 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~------  389 (399)
                      .....+|...++||+|+||.||++... .++.||||.+........+.+.+|+.++.++. ||||+++++++..      
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~  103 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD  103 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence            334456788899999999999999975 58899999997776666778999999999996 9999999999853      


Q ss_pred             --CCeEEEEEeC
Q 044262          390 --GTERLLIYEF  399 (399)
Q Consensus       390 --~~~~~lv~Ey  399 (399)
                        ....++|+||
T Consensus       104 ~~~~~~~lv~e~  115 (337)
T 3ll6_A          104 TGQAEFLLLTEL  115 (337)
T ss_dssp             TSSEEEEEEEEC
T ss_pred             cCCceEEEEEEe
Confidence              3447899987

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.76  E-value=1.2e-08  Score=96.40  Aligned_cols=78  Identities=27%  Similarity=0.491  Sum_probs=65.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--------  390 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------  390 (399)
                      ++|...++||+|+||.||++... +++.||+|++....  ......+.+|+.++..++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            46778899999999999999984 58899999986542  22345788999999999999999999998763        


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..+|||||
T Consensus        97 ~~~~lv~e~  105 (351)
T 3mi9_A           97 GSIYLVFDF  105 (351)
T ss_dssp             CEEEEEEEC
T ss_pred             ceEEEEEec
Confidence            468999997

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.75  E-value=4.9e-09  Score=102.64  Aligned_cols=78  Identities=23%  Similarity=0.213  Sum_probs=58.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... .++.||||.+...   .......+.+|+.++..++||||+++++++...+..+|||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            45777899999999999999875 4889999999653   2233456889999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       228 e~  229 (446)
T 4ejn_A          228 EY  229 (446)
T ss_dssp             CC
T ss_pred             ee
Confidence            97

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.75  E-value=1.5e-08  Score=94.62  Aligned_cols=87  Identities=32%  Similarity=0.542  Sum_probs=71.7

Q ss_pred             cChhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       312 ~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      +++.++....+.|...+.||+|+||.||++... +++.||||.+..... ....+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            345566667788999999999999999999984 588999999875432 345789999999998 89999999999987


Q ss_pred             ------CCeEEEEEeC
Q 044262          390 ------GTERLLIYEF  399 (399)
Q Consensus       390 ------~~~~~lv~Ey  399 (399)
                            .+..+|||||
T Consensus        93 ~~~~~~~~~~~lv~e~  108 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEF  108 (326)
T ss_dssp             CC--CCCCEEEEEEEC
T ss_pred             ccCccccceEEEEEEc
Confidence                  4578999997

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.75  E-value=1.6e-08  Score=95.40  Aligned_cols=79  Identities=20%  Similarity=0.414  Sum_probs=66.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  393 (399)
                      .++|...+.||+|+||.||++... .|+.||||.+... .......+.+|+.++.+++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            456788899999999999999985 4889999999754 334456789999999999999999999988654     568


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++|+||
T Consensus        90 ~lv~e~   95 (353)
T 2b9h_A           90 YIIQEL   95 (353)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999997

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.75  E-value=1.1e-08  Score=102.92  Aligned_cols=79  Identities=28%  Similarity=0.373  Sum_probs=67.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      .++|...++||+|+||.||++... +|+.||+|.+....   ......+.+|+.+|..++|||||++++++...+..+||
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            356778899999999999999985 58999999996531   22345689999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       263 mEy  265 (576)
T 2acx_A          263 LTL  265 (576)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            997

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.75  E-value=6.4e-09  Score=96.52  Aligned_cols=73  Identities=25%  Similarity=0.545  Sum_probs=62.1

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++.. .++.||||.+...  ...+.|.+|+.++.+++||||+++++++.  +..+|||||
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~   80 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY   80 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred             hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence            3566779999999999999998 4788999998654  33567999999999999999999999875  457899997

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.75  E-value=1e-08  Score=99.49  Aligned_cols=79  Identities=18%  Similarity=0.407  Sum_probs=63.8

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  390 (399)
                      ..++|...++||+|+||.||++.... ++.||||.+....        ......+.+|+.+|.+++||||+++++++ ..
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DA  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE-ES
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE-ec
Confidence            34678888999999999999998754 7899999986531        11123488999999999999999999997 55


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..+|||||
T Consensus       212 ~~~~lv~e~  220 (419)
T 3i6u_A          212 EDYYIVLEL  220 (419)
T ss_dssp             SEEEEEEEC
T ss_pred             CceEEEEEc
Confidence            668999997

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.74  E-value=2e-08  Score=96.33  Aligned_cols=79  Identities=24%  Similarity=0.485  Sum_probs=59.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC--eEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGT--ERL  394 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~  394 (399)
                      .++|...++||+|+||.||++... .++.||||++...  .....+.+.+|+.++..+. ||||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            356788899999999999999874 4889999998653  3445567899999999997 999999999997544  689


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        88 lv~e~   92 (388)
T 3oz6_A           88 LVFDY   92 (388)
T ss_dssp             EEEEC
T ss_pred             EEecc
Confidence            99997

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.73  E-value=1.7e-08  Score=96.65  Aligned_cols=68  Identities=22%  Similarity=0.432  Sum_probs=54.0

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE  389 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  389 (399)
                      +...++|...++||+|+||.||++... +++.||||++.....    ...+|+.+|..++|||||++++++..
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeee
Confidence            345567888999999999999999874 589999999865432    23479999999999999999999854

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.73  E-value=5e-09  Score=96.58  Aligned_cols=82  Identities=16%  Similarity=0.251  Sum_probs=54.3

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ....++|...+.||+|+||.||++... +++.||||.+.... ....+.+.+|+.++.+++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            344567888999999999999999864 57899999986542 2334578999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        91 v~e~   94 (303)
T 2vwi_A           91 VMKL   94 (303)
T ss_dssp             EEEC
T ss_pred             Eehh
Confidence            9997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.73  E-value=1.2e-08  Score=97.33  Aligned_cols=79  Identities=23%  Similarity=0.350  Sum_probs=59.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  391 (399)
                      .+.|...+.||+|+||.||++... .|+.||||++...  .....+.+.+|+.+|..++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            356777899999999999999974 5889999998653  3344567899999999999999999999987653      


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus       104 ~~~lv~e~  111 (367)
T 1cm8_A          104 DFYLVMPF  111 (367)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEEec
Confidence            45999997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.73  E-value=1.5e-08  Score=104.70  Aligned_cols=79  Identities=16%  Similarity=0.379  Sum_probs=67.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEc--CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS--HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-----  392 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~--~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----  392 (399)
                      .++|...++||+|+||.||++...  +++.||||.+... .......+.+|+.+|.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            357888899999999999999975  5789999998654 34445679999999999999999999999987554     


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|||||
T Consensus       159 ~~lv~E~  165 (681)
T 2pzi_A          159 GYIVMEY  165 (681)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEEe
Confidence            6999997

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.73  E-value=1.8e-08  Score=96.19  Aligned_cols=79  Identities=25%  Similarity=0.437  Sum_probs=66.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE----
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER----  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----  393 (399)
                      .+.|...+.||+|+||.||++... +++.||||.+...  .....+.+.+|+.++..++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            356778899999999999999875 4889999999764  334456799999999999999999999999876554    


Q ss_pred             --EEEEeC
Q 044262          394 --LLIYEF  399 (399)
Q Consensus       394 --~lv~Ey  399 (399)
                        ++||||
T Consensus       121 ~~~lv~e~  128 (371)
T 4exu_A          121 DFYLVMPF  128 (371)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEEcc
Confidence              999997

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.72  E-value=2.8e-08  Score=94.64  Aligned_cols=80  Identities=15%  Similarity=0.270  Sum_probs=67.7

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------QGELEFKNEVLLVARL-QHRNLVRLLGFSFE  389 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  389 (399)
                      ..++|...+.||+|+||.||++... +|+.||||.+.....        ...+.+.+|+.++.++ +||||+++++++..
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  171 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES  171 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred             hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence            3456788899999999999999985 589999999865421        1134688999999998 79999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      ....+|||||
T Consensus       172 ~~~~~lv~e~  181 (365)
T 2y7j_A          172 SSFMFLVFDL  181 (365)
T ss_dssp             SSEEEEEECC
T ss_pred             CCEEEEEEEe
Confidence            9999999997

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.72  E-value=1.4e-08  Score=92.95  Aligned_cols=77  Identities=35%  Similarity=0.652  Sum_probs=62.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhh-------HHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG-------ELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~-------~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      .++|...+.||+|+||.||++... +++.||+|.+.......       .+.+.+|+.++.+++||||+++++++.... 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            356777899999999999999984 58899999986542211       157999999999999999999999985443 


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                       ++||||
T Consensus        97 -~lv~e~  102 (287)
T 4f0f_A           97 -RMVMEF  102 (287)
T ss_dssp             -EEEEEC
T ss_pred             -eEEEEe
Confidence             689987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.72  E-value=2.4e-08  Score=102.08  Aligned_cols=71  Identities=28%  Similarity=0.438  Sum_probs=59.8

Q ss_pred             CcccccCceEEEEEEEc---CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS---HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~---~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||+|.+.   .++.||||+++..  .....++|.+|+.+|.+++|||||++++++. .+..+|||||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~  450 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEM  450 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEEC
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEc
Confidence            47999999999999763   3578999999754  3344678999999999999999999999985 5568899997

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.72  E-value=2e-08  Score=93.86  Aligned_cols=78  Identities=29%  Similarity=0.538  Sum_probs=63.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcE--EEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQE--IAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~--vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...+.||+|+||.||++... ++..  +++|.++.. .....+.+.+|+.++.++ +||||+++++++...+..+||
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            45777899999999999999875 3554  599998754 333445799999999999 999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       105 ~e~  107 (327)
T 1fvr_A          105 IEY  107 (327)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            997

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.72  E-value=1.3e-08  Score=94.41  Aligned_cols=86  Identities=20%  Similarity=0.327  Sum_probs=72.6

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCC--CCCccceeEEEEe
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQ--HRNLVRLLGFSFE  389 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~  389 (399)
                      +..+....+.|...+.||+|+||.||++...+++.||||.+...  .....+.+.+|+.++.+++  |+||+++++++..
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   99 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   99 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence            34445555678888999999999999999878899999998653  3445568999999999997  5999999999999


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      .+..+||||+
T Consensus       100 ~~~~~lv~e~  109 (313)
T 3cek_A          100 DQYIYMVMEC  109 (313)
T ss_dssp             SSEEEEEECC
T ss_pred             CCEEEEEEec
Confidence            9999999985

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.72  E-value=1.7e-08  Score=94.19  Aligned_cols=77  Identities=19%  Similarity=0.377  Sum_probs=61.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      ++|...+.||+|+||.||++.... ++.||||.+.....        .....+.+|+.++.+++||||+++++++...+ 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            457778999999999999998754 78999999865321        12235889999999999999999999986544 


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus        89 ~~lv~e~   95 (322)
T 2ycf_A           89 YYIVLEL   95 (322)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEec
Confidence            8999997

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.71  E-value=2.3e-08  Score=91.99  Aligned_cols=77  Identities=29%  Similarity=0.447  Sum_probs=64.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-----------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-----------  389 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----------  389 (399)
                      ++|...+.||+|+||.||++... +++.||||.+... ....+.+.+|+.++.+++||||+++++++..           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            45777899999999999999974 5889999999653 3445679999999999999999999998865           


Q ss_pred             --CCeEEEEEeC
Q 044262          390 --GTERLLIYEF  399 (399)
Q Consensus       390 --~~~~~lv~Ey  399 (399)
                        ....++||||
T Consensus        85 ~~~~~~~lv~e~   96 (303)
T 1zy4_A           85 KKKSTLFIQMEY   96 (303)
T ss_dssp             -CEEEEEEEEEC
T ss_pred             ccCCceEEEEec
Confidence              3567899997

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.71  E-value=1.6e-08  Score=101.18  Aligned_cols=78  Identities=27%  Similarity=0.348  Sum_probs=67.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|...++||+|+||.||++... .|+.||+|.+.+..   ......+.+|+.+|.+++||||+++++++...+..+|||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            45777889999999999999985 48999999996532   123457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       265 E~  266 (543)
T 3c4z_A          265 TI  266 (543)
T ss_dssp             CC
T ss_pred             Ee
Confidence            97

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.71  E-value=2.1e-08  Score=92.04  Aligned_cols=79  Identities=28%  Similarity=0.549  Sum_probs=65.0

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +...+.|...++||+|+||.||++...  ..||+|.++..  .....+.|.+|+.++.+++|+||++++++. ..+..++
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l   96 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI   96 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence            344567888899999999999999863  35999998654  344556799999999999999999999965 5566889


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        97 v~e~  100 (289)
T 3og7_A           97 VTQW  100 (289)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9987

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.71  E-value=1.7e-08  Score=91.94  Aligned_cols=76  Identities=29%  Similarity=0.525  Sum_probs=63.5

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-CeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-TERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey  399 (399)
                      .++|...+.||+|+||.||++.. .++.||||.++...  ..+.+.+|+.++.+++||||+++++++... +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            45677889999999999999987 58899999987543  345799999999999999999999997654 468999997

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.71  E-value=5.2e-09  Score=98.46  Aligned_cols=79  Identities=25%  Similarity=0.378  Sum_probs=66.7

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      .++|...+.||+|+||.||++... +++.||||.+.....        .....+.+|+.++.+++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            356778899999999999999864 588999999976421        12335788999999999999999999999999


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++||||
T Consensus       103 ~~~lv~e~  110 (335)
T 3dls_A          103 FFQLVMEK  110 (335)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEEe
Confidence            99999996

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.70  E-value=1.8e-08  Score=92.61  Aligned_cols=76  Identities=29%  Similarity=0.481  Sum_probs=62.0

Q ss_pred             CcccCcccccCceEEEEEEEcC-C---cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE-EEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH-G---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER-LLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~-g---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lv~  397 (399)
                      |...++||+|+||.||++...+ +   ..+|+|.+... .....+.+.+|+.++.+++||||+++++++...+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            4456899999999999998643 2   37999999764 334556899999999999999999999999766554 8999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       103 e~  104 (298)
T 3pls_A          103 PY  104 (298)
T ss_dssp             CC
T ss_pred             ec
Confidence            86

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.70  E-value=2.3e-08  Score=94.61  Aligned_cols=78  Identities=26%  Similarity=0.438  Sum_probs=65.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE------  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------  392 (399)
                      ++|...+.||+|+||.||++... +|+.||||.+...  .....+.+.+|+.++..++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            45777899999999999999975 4889999999654  33345678999999999999999999999876543      


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus       104 ~~lv~e~  110 (353)
T 3coi_A          104 FYLVMPF  110 (353)
T ss_dssp             CEEEEEC
T ss_pred             EEEEecc
Confidence            4999997

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.70  E-value=4.1e-08  Score=90.34  Aligned_cols=75  Identities=25%  Similarity=0.485  Sum_probs=60.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhc--CCCCCccceeEEEEeC----CeEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEG----TERL  394 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~  394 (399)
                      .++|...++||+|+||.||++.. +++.||||.+...   ....+.+|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            35677889999999999999988 6889999998643   34456777776665  8999999999987653    4588


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        83 lv~e~   87 (301)
T 3q4u_A           83 LITHY   87 (301)
T ss_dssp             EEECC
T ss_pred             Eehhh
Confidence            99997

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.70  E-value=3.2e-08  Score=94.03  Aligned_cols=79  Identities=14%  Similarity=0.272  Sum_probs=66.3

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  393 (399)
                      ...|...++||+|+||.||++... ++..||||.+... .....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            356888899999999999999875 4788999999754 334446799999999999999999999998654     358


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      ++|+||
T Consensus       106 ~iv~e~  111 (364)
T 3qyz_A          106 YIVQDL  111 (364)
T ss_dssp             EEEEEC
T ss_pred             EEEEcc
Confidence            999997

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.70  E-value=3.5e-08  Score=92.20  Aligned_cols=75  Identities=20%  Similarity=0.422  Sum_probs=64.5

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEe--CCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFE--GTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++.. .+++.||||.++...   .+.+.+|+.++.+++ ||||+++++++..  ....+|||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            4577789999999999999986 458899999997543   357899999999997 9999999999987  56689999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       113 e~  114 (330)
T 3nsz_A          113 EH  114 (330)
T ss_dssp             EC
T ss_pred             ec
Confidence            97

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.69  E-value=3.2e-08  Score=95.50  Aligned_cols=71  Identities=23%  Similarity=0.515  Sum_probs=55.4

Q ss_pred             cCcccccCceEEEEEEEc---CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~---~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey  399 (399)
                      .++||+|+||.||++...   .+..||||.+.....  ...+.+|+.+|.+++|||||++++++..  ....+|||||
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence            468999999999999975   467899999975422  2468899999999999999999999965  5679999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.69  E-value=2.1e-08  Score=95.06  Aligned_cols=79  Identities=22%  Similarity=0.152  Sum_probs=67.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  395 (399)
                      .++|...++||+|+||.||++.... ++.||+|.+++..   ....+.+..|..++..+ +||||+++.+++...+..+|
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4568888999999999999999865 7889999996531   23345688999999987 89999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        99 v~E~  102 (353)
T 2i0e_A           99 VMEY  102 (353)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9997

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.68  E-value=2.6e-08  Score=93.20  Aligned_cols=77  Identities=32%  Similarity=0.557  Sum_probs=58.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++|...++||+|+||.||+|.... ++    .||+|.+... .....+.|.+|+.++.+++||||+++++++..+. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            457778999999999999999643 33    4688888643 3345568999999999999999999999997655 667


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        94 v~e~   97 (327)
T 3poz_A           94 ITQL   97 (327)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            7775

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.68  E-value=1.4e-08  Score=96.92  Aligned_cols=78  Identities=23%  Similarity=0.273  Sum_probs=57.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||++..+. ++.+|+|.+++..   ......+.+|..+ +..++||||+++++++...+..+||
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            356778999999999999999864 7889999997542   2234457777776 5678999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       118 ~E~  120 (373)
T 2r5t_A          118 LDY  120 (373)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.68  E-value=1.9e-08  Score=94.98  Aligned_cols=74  Identities=20%  Similarity=0.356  Sum_probs=63.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...+.||+|+||.||++..+ .++.||+|.++....    .+.+|++++.++ +||||+++++++..++..+|||||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            45777899999999999999985 478999999976532    345688888777 799999999999999999999997

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.68  E-value=1.7e-08  Score=95.94  Aligned_cols=81  Identities=19%  Similarity=0.296  Sum_probs=66.9

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEE------EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC---CCCccceeEE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGR------LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ---HRNLVRLLGF  386 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~------~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~  386 (399)
                      +++...+.|...++||+|+||.||++.      ...++.||||.+....   ..++..|+.++..++   |+||++++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            344556778888999999999999994      3457889999997654   346888888888886   9999999999


Q ss_pred             EEeCCeEEEEEeC
Q 044262          387 SFEGTERLLIYEF  399 (399)
Q Consensus       387 ~~~~~~~~lv~Ey  399 (399)
                      +...+..+|||||
T Consensus       136 ~~~~~~~~lv~e~  148 (365)
T 3e7e_A          136 HLFQNGSVLVGEL  148 (365)
T ss_dssp             EECSSCEEEEECC
T ss_pred             eecCCCcEEEEec
Confidence            9999999999997

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.68  E-value=2.6e-08  Score=94.34  Aligned_cols=84  Identities=24%  Similarity=0.377  Sum_probs=57.4

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-  392 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-  392 (399)
                      .......++|...++||+|+||.||++... ++..||||.+.... .....+.+|+..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            344556678999999999999999999985 48899999986542 223357788888899999999999999876433 


Q ss_pred             ------EEEEEeC
Q 044262          393 ------RLLIYEF  399 (399)
Q Consensus       393 ------~~lv~Ey  399 (399)
                            .+|||||
T Consensus        95 ~~~~~~~~lv~e~  107 (360)
T 3e3p_A           95 DRRDIYLNVVMEY  107 (360)
T ss_dssp             CTTCEEEEEEEEC
T ss_pred             cccceeEEEEeec
Confidence                  7899997

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.67  E-value=2.5e-08  Score=93.43  Aligned_cols=76  Identities=21%  Similarity=0.305  Sum_probs=65.2

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++.. .+++.||||.+.....  ...+.+|+.++.++ +|+||+++++++..++..+|||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            5677889999999999999996 4588999999875432  23588999999999 999999999999999999999997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.67  E-value=4.1e-08  Score=91.12  Aligned_cols=79  Identities=20%  Similarity=0.365  Sum_probs=57.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHH-HHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELE-FKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~-f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      .++|...+.||+|+||.||++... +++.||||.+.... ...... +..+..++..++||||+++++++...+..+|||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            356777889999999999999985 58899999997653 222333 444445788889999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       104 e~  105 (318)
T 2dyl_A          104 EL  105 (318)
T ss_dssp             CC
T ss_pred             ec
Confidence            97

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.67  E-value=2.6e-08  Score=91.65  Aligned_cols=77  Identities=26%  Similarity=0.486  Sum_probs=62.7

Q ss_pred             CCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLI  396 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv  396 (399)
                      .|...++||+|+||.||++...+    ...+|+|.+... .....+.+.+|+.++.+++||||+++++++.. .+..++|
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            46677999999999999998643    235899998764 33445679999999999999999999998754 4568899


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       106 ~e~  108 (298)
T 3f66_A          106 LPY  108 (298)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            997

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.67  E-value=2.7e-08  Score=94.82  Aligned_cols=79  Identities=23%  Similarity=0.394  Sum_probs=61.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------T  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~  391 (399)
                      .++|...+.||+|+||.||++... .|+.||||++...  .....+.+.+|+.+|..++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            356788899999999999999864 5889999999653  334456789999999999999999999998654      4


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+||+||
T Consensus       108 ~~~lv~e~  115 (367)
T 2fst_X          108 DVYLVTHL  115 (367)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEecc
Confidence            57899886

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.66  E-value=3.6e-08  Score=89.91  Aligned_cols=79  Identities=28%  Similarity=0.522  Sum_probs=64.6

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ..++|...+.||+|+||.||++...+    +..||+|.+... .....+.|.+|+.++.+++||||+++++++. .+..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCE
Confidence            34567788999999999999998743    236999998765 4445678999999999999999999999975 45578


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +||||
T Consensus        89 ~v~e~   93 (281)
T 3cc6_A           89 IIMEL   93 (281)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99987

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.66  E-value=1.5e-08  Score=96.85  Aligned_cols=76  Identities=28%  Similarity=0.538  Sum_probs=62.1

Q ss_pred             CcccCcccccCceEEEEEEEcC--C--cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEE
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSH--G--QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIY  397 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~--g--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~  397 (399)
                      |...++||+|+||.||+|...+  +  ..||||.++.. .....+.|.+|+.+|.+++||||+++++++.. .+..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            4556899999999999998742  2  36899998654 33456789999999999999999999999765 45789999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       171 e~  172 (373)
T 3c1x_A          171 PY  172 (373)
T ss_dssp             EC
T ss_pred             EC
Confidence            97

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.66  E-value=2.5e-08  Score=90.94  Aligned_cols=74  Identities=30%  Similarity=0.470  Sum_probs=62.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-----------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-----------  389 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----------  389 (399)
                      .+|...+.||+|+||.||++... +++.||+|.+.....    .+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG----GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH----HHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            45777899999999999999986 589999999976542    57789999999999999999998754           


Q ss_pred             -----CCeEEEEEeC
Q 044262          390 -----GTERLLIYEF  399 (399)
Q Consensus       390 -----~~~~~lv~Ey  399 (399)
                           ....++||||
T Consensus        87 ~~~~~~~~~~lv~e~  101 (284)
T 2a19_B           87 SSRSKTKCLFIQMEF  101 (284)
T ss_dssp             --CCEEEEEEEEECC
T ss_pred             ccccCcceEEEEEec
Confidence                 3447899997

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.65  E-value=2.4e-08  Score=96.94  Aligned_cols=73  Identities=26%  Similarity=0.553  Sum_probs=59.4

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC----C--eEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG----T--ERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----~--~~~l  395 (399)
                      .|...++||+|+||.||++... .++.||||++.....    .+.+|+++|.+++|+|||++++++...    +  .++|
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            4667789999999999999985 489999999865422    245799999999999999999988642    2  2678


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       131 v~e~  134 (420)
T 1j1b_A          131 VLDY  134 (420)
T ss_dssp             EEEC
T ss_pred             ehhc
Confidence            9997

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.63  E-value=8.3e-08  Score=90.02  Aligned_cols=78  Identities=24%  Similarity=0.507  Sum_probs=65.7

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhc--CCCCCccceeEEEEeCC----
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEGT----  391 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----  391 (399)
                      ....++|...+.||+|+||.||++.. +++.||||.+...   ....+.+|.+++..  ++||||+++++++...+    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            34456788899999999999999998 5889999999643   34578889888877  79999999999998765    


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++||||
T Consensus       114 ~~~lv~e~  121 (342)
T 1b6c_B          114 QLWLVSDY  121 (342)
T ss_dssp             CEEEEECC
T ss_pred             eeEEEEee
Confidence            78999997

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.63  E-value=2.9e-08  Score=93.25  Aligned_cols=66  Identities=18%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC--------hhhHHHHHHHHHHHhcCC---------CCCcccee
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--------VQGELEFKNEVLLVARLQ---------HRNLVRLL  384 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~niv~l~  384 (399)
                      ++|...++||+|+||.||++.. +|+.||||.+....        ....+.+.+|+.+|.+++         |+|||++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4577789999999999999988 78999999997542        122367899999988875         89999988


Q ss_pred             EEEE
Q 044262          385 GFSF  388 (399)
Q Consensus       385 g~~~  388 (399)
                      +.+.
T Consensus        99 ~~~~  102 (336)
T 2vuw_A           99 SVHC  102 (336)
T ss_dssp             EEEE
T ss_pred             ceeE
Confidence            8754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.63  E-value=5.8e-08  Score=90.85  Aligned_cols=83  Identities=24%  Similarity=0.320  Sum_probs=67.3

Q ss_pred             HHhhcCCCccc-CcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262          317 IRDATNNFSTD-NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT  391 (399)
Q Consensus       317 l~~~~~~~~~~-~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  391 (399)
                      .+.-.+.|... ++||+|+||.||++... +++.||+|.+...  .......+.+|+.++..+ +||||+++++++...+
T Consensus        23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            33333445444 78999999999999976 4889999998754  233456899999999998 5699999999999999


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus       103 ~~~lv~e~  110 (327)
T 3lm5_A          103 EIILILEY  110 (327)
T ss_dssp             EEEEEEEC
T ss_pred             eEEEEEEe
Confidence            99999997

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.62  E-value=8.4e-08  Score=89.73  Aligned_cols=78  Identities=23%  Similarity=0.509  Sum_probs=63.0

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC--CCCCccceeEEEEeC----C
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL--QHRNLVRLLGFSFEG----T  391 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~----~  391 (399)
                      ....++|...++||+|+||.||++... ++.||||.+....   ...+.+|.+++..+  +||||+++++++...    .
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            334467888999999999999999984 8899999986432   33556666666554  999999999999887    6


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus       109 ~~~lv~e~  116 (337)
T 3mdy_A          109 QLYLITDY  116 (337)
T ss_dssp             EEEEEECC
T ss_pred             ceEEEEec
Confidence            79999997

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.62  E-value=5.2e-08  Score=99.98  Aligned_cols=81  Identities=22%  Similarity=0.359  Sum_probs=66.1

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  392 (399)
                      ....+.|...+.||+|+||.||+|....    +..||||.++.. .....+.|.+|+.+|.+++||||++++|++ ..+.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCc
Confidence            3344567778899999999999998743    457999998764 344456899999999999999999999998 4566


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|||||
T Consensus       465 ~~lv~E~  471 (656)
T 2j0j_A          465 VWIIMEL  471 (656)
T ss_dssp             CEEEEEC
T ss_pred             eEEEEEc
Confidence            8999997

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.61  E-value=1.7e-08  Score=95.74  Aligned_cols=78  Identities=27%  Similarity=0.324  Sum_probs=65.6

Q ss_pred             CCCcccCcccccCceEEEEEEE----cCCcEEEEEEecCCC----hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS----VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  392 (399)
                      ++|...++||+|+||.||++..    ..++.||||.++...    ....+.+.+|+.++.++ +|+||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            4677889999999999999987    358899999986431    12234678899999999 69999999999999999


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|||||
T Consensus       134 ~~lv~e~  140 (355)
T 1vzo_A          134 LHLILDY  140 (355)
T ss_dssp             EEEEECC
T ss_pred             EEEEeec
Confidence            9999997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.60  E-value=1.2e-08  Score=97.56  Aligned_cols=80  Identities=15%  Similarity=0.184  Sum_probs=62.1

Q ss_pred             hcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---ChhhHHHHHHHH---HHHhcCCCCCcccee-------E
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEV---LLVARLQHRNLVRLL-------G  385 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g  385 (399)
                      ..+.|...+.||+|+||.||++.. .+|+.||||.+...   .....+.+.+|+   ..|.+++|||||+++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            345677889999999999999996 45899999999743   334456799999   556667899999998       6


Q ss_pred             EEEeCC-----------------eEEEEEeC
Q 044262          386 FSFEGT-----------------ERLLIYEF  399 (399)
Q Consensus       386 ~~~~~~-----------------~~~lv~Ey  399 (399)
                      ++...+                 ..+|||||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~  181 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPR  181 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEec
Confidence            655442                 27899987

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.60  E-value=4.2e-08  Score=95.62  Aligned_cols=76  Identities=21%  Similarity=0.327  Sum_probs=63.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...|...++||+|+||.|+.....+++.||||++......   .+.+|+.+|.++ +|||||++++++......+|||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            3457778999999999966555557899999999654322   367899999998 899999999999999999999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.59  E-value=5.6e-08  Score=93.52  Aligned_cols=74  Identities=23%  Similarity=0.491  Sum_probs=60.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe------EEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE------RLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~l  395 (399)
                      ..|...++||+|+||.||++....+..+|+|++.....    ...+|+.+|..++||||+++++++.....      .+|
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            34677899999999999999997777799998865432    23479999999999999999999865432      789


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       116 v~e~  119 (394)
T 4e7w_A          116 VLEY  119 (394)
T ss_dssp             EEEC
T ss_pred             Eeec
Confidence            9997

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.59  E-value=6.2e-08  Score=94.45  Aligned_cols=72  Identities=22%  Similarity=0.198  Sum_probs=61.1

Q ss_pred             cccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          325 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...++||+|+||.||.....+|+.||||++...   ..+.+.+|+.++.++ +|||||++++++...+..+|||||
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~   90 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL   90 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence            346789999999998766667999999998653   234678999999876 899999999999989999999997

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.59  E-value=2.5e-08  Score=93.01  Aligned_cols=81  Identities=28%  Similarity=0.480  Sum_probs=62.3

Q ss_pred             hhcCCCcccCcccccCceEEEEEEE--cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEE---
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRL--SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSF---  388 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~--~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~---  388 (399)
                      ...+.|...+.||+|+||.||++..  .+++.||+|.+....  ......+.+|+.++..+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3446788889999999999999997  357889999986431  11223566777776655   8999999999987   


Q ss_pred             --eCCeEEEEEeC
Q 044262          389 --EGTERLLIYEF  399 (399)
Q Consensus       389 --~~~~~~lv~Ey  399 (399)
                        .....+|||||
T Consensus        88 ~~~~~~~~lv~e~  100 (326)
T 1blx_A           88 TDRETKLTLVFEH  100 (326)
T ss_dssp             CSSEEEEEEEEEC
T ss_pred             cCCCceEEEEEec
Confidence              44568999997

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.58  E-value=4.5e-08  Score=89.59  Aligned_cols=77  Identities=32%  Similarity=0.533  Sum_probs=56.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC--Cc--EEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH--GQ--EIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~--g~--~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ++|...+.||+|+||.||++.+..  +.  .||||.++..   .....+.+.+|+.++.+++||||+++++++...+ .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            457778999999999999998632  33  6899998654   2234567999999999999999999999987654 78


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      +|+||
T Consensus        97 ~v~e~  101 (291)
T 1u46_A           97 MVTEL  101 (291)
T ss_dssp             EEEEC
T ss_pred             eeEec
Confidence            89986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.58  E-value=1.3e-08  Score=94.70  Aligned_cols=84  Identities=23%  Similarity=0.405  Sum_probs=69.2

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      ..++....++|...+.||+|+||.||++...+  .+|+|.+...  .....+.+.+|+.++.+++|+||+++++++...+
T Consensus        25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            34555566788889999999999999998843  4999998653  2223346889999999999999999999999999


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..++|+||
T Consensus       103 ~~~iv~e~  110 (319)
T 2y4i_B          103 HLAIITSL  110 (319)
T ss_dssp             CEEEECBC
T ss_pred             ceEEEeec
Confidence            99999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.56  E-value=8.1e-08  Score=88.89  Aligned_cols=79  Identities=29%  Similarity=0.476  Sum_probs=60.5

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS-----VQGELEFKNEVLLVARL---QHRNLVRLLGFSFEGT  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~  391 (399)
                      .++|...++||+|+||.||++.. ..++.||+|.+....     ......+.+|+.++..+   +||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            45788889999999999999996 358899999986421     11124567777777665   5999999999998754


Q ss_pred             -----eEEEEEeC
Q 044262          392 -----ERLLIYEF  399 (399)
Q Consensus       392 -----~~~lv~Ey  399 (399)
                           ..++||||
T Consensus        88 ~~~~~~~~lv~e~  100 (308)
T 3g33_A           88 TDREIKVTLVFEH  100 (308)
T ss_dssp             SSSEEEEEEEEEC
T ss_pred             CCCceeEEEEehh
Confidence                 47899987

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.55  E-value=3.2e-08  Score=92.48  Aligned_cols=77  Identities=29%  Similarity=0.487  Sum_probs=60.7

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++|...++||+|+||.||++.... +.    .|++|.+.... ......+.+|+.++.+++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            456778999999999999999743 43    48888885432 223346889999999999999999999885 566889


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        92 v~e~   95 (325)
T 3kex_A           92 VTQY   95 (325)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9987

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.55  E-value=3.2e-08  Score=91.74  Aligned_cols=79  Identities=27%  Similarity=0.451  Sum_probs=58.2

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh------hHHHHHHHHHHHhcC----CCCCccceeEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ------GELEFKNEVLLVARL----QHRNLVRLLGFSFE  389 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~------~~~~f~~E~~~l~~l----~H~niv~l~g~~~~  389 (399)
                      .++|...+.||+|+||.||++... +++.||||.+......      ....+.+|+.++.++    +|+||+++++++..
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~  109 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET  109 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence            356778899999999999999864 5789999999654321      223466789888888    89999999999988


Q ss_pred             CCeEEEEEeC
Q 044262          390 GTERLLIYEF  399 (399)
Q Consensus       390 ~~~~~lv~Ey  399 (399)
                      .+..++|+||
T Consensus       110 ~~~~~~v~e~  119 (312)
T 2iwi_A          110 QEGFMLVLER  119 (312)
T ss_dssp             ---CEEEEEC
T ss_pred             CCeEEEEEEe
Confidence            8889999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.54  E-value=2.1e-07  Score=90.60  Aligned_cols=78  Identities=18%  Similarity=0.270  Sum_probs=65.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcC------CCCCccceeEEEEeCCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARL------QHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~  393 (399)
                      ...|...++||+|+||.||++.... ++.||||.+... ......+.+|+.++..+      .|+||+++++.+...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            3457888999999999999998754 789999999653 33345678888887766      577999999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus       175 ~lv~e~  180 (429)
T 3kvw_A          175 CMTFEL  180 (429)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999997

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.54  E-value=1e-07  Score=89.15  Aligned_cols=77  Identities=32%  Similarity=0.557  Sum_probs=61.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      ++|...++||+|+||.||++.... ++    .|++|.+... .....+.+.+|+.++..++||||+++++++..+. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            457788999999999999999743 43    4688888644 3345668999999999999999999999997655 667


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      |+||
T Consensus        94 v~~~   97 (327)
T 3lzb_A           94 ITQL   97 (327)
T ss_dssp             EECC
T ss_pred             EEEe
Confidence            7765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.53  E-value=9.7e-08  Score=89.99  Aligned_cols=78  Identities=18%  Similarity=0.280  Sum_probs=57.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCCChh-----------hHHHHHHHHHHHhcCCCCCccceeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNSVQ-----------GELEFKNEVLLVARLQHRNLVRLLGF  386 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv~l~g~  386 (399)
                      ++|...+.||+|+||.||++...    .+..+|+|.+......           ....+.+|+..+..++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56778899999999999999985    4678999998765321           11246788899999999999999999


Q ss_pred             EEe----CCeEEEEEeC
Q 044262          387 SFE----GTERLLIYEF  399 (399)
Q Consensus       387 ~~~----~~~~~lv~Ey  399 (399)
                      +..    ....+|||||
T Consensus       117 ~~~~~~~~~~~~lv~e~  133 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMER  133 (345)
T ss_dssp             EEEESSSCEEEEEEEEC
T ss_pred             cccccCCCcEEEEEEec
Confidence            987    6789999997

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.53  E-value=1.7e-07  Score=89.01  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=60.9

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCChhhH-----------HHHHHHHHHHhcCCCCCccc
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGE-----------LEFKNEVLLVARLQHRNLVR  382 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~~~~-----------~~f~~E~~~l~~l~H~niv~  382 (399)
                      ..+.|...++||+|+||.||++....      ++.||||.+........           ..+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34578888999999999999998854      36799999876542211           12455666788889999999


Q ss_pred             eeEEEEeC----CeEEEEEeC
Q 044262          383 LLGFSFEG----TERLLIYEF  399 (399)
Q Consensus       383 l~g~~~~~----~~~~lv~Ey  399 (399)
                      +++++...    ...+|||||
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~  133 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDR  133 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEEC
T ss_pred             EEeeeeeccCCcceEEEEEeC
Confidence            99998764    448999997

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.51  E-value=1.1e-07  Score=91.07  Aligned_cols=77  Identities=21%  Similarity=0.249  Sum_probs=64.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC--------CCCccceeEEEE----
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ--------HRNLVRLLGFSF----  388 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~----  388 (399)
                      ++|...++||+|+||.||++... +++.||||.+... ....+.+.+|+.++..++        |+||+++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            56888899999999999999864 4789999999654 344567899999999885        788999999987    


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      .+...+|||||
T Consensus       116 ~~~~~~lv~e~  126 (397)
T 1wak_A          116 NGTHICMVFEV  126 (397)
T ss_dssp             TEEEEEEEECC
T ss_pred             CCceEEEEEec
Confidence            44578999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.50  E-value=2.3e-07  Score=88.78  Aligned_cols=84  Identities=20%  Similarity=0.252  Sum_probs=67.8

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CC-----CccceeEEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HR-----NLVRLLGFS  387 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~  387 (399)
                      .......++|...++||+|+||.||++... +++.||||.++.. .....++.+|+.++..++ |+     +|+++.+++
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            334445678888999999999999999875 4788999999653 333457788888888774 44     499999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      ...+..+|||||
T Consensus       126 ~~~~~~~lv~e~  137 (382)
T 2vx3_A          126 MFRNHLCLVFEM  137 (382)
T ss_dssp             EETTEEEEEEEC
T ss_pred             ccCCceEEEEec
Confidence            999999999997

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.50  E-value=2.6e-07  Score=84.77  Aligned_cols=76  Identities=20%  Similarity=0.414  Sum_probs=65.5

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...+.||+|+||.||++.. .+++.||||.+.....  ...+.+|+..+..+ +|+|++++++++......+|||||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            4577889999999999999996 4588999999865432  23588999999999 899999999999999999999997

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.47  E-value=1.3e-07  Score=97.39  Aligned_cols=79  Identities=22%  Similarity=0.157  Sum_probs=66.4

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  395 (399)
                      .++|...++||+|+||.||++.... ++.||||.+++.   .....+.+..|..++..+ +|+||+++++++...+.++|
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            4568888999999999999999864 788999999753   122345688999999987 79999999999988899999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       420 V~E~  423 (674)
T 3pfq_A          420 VMEY  423 (674)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9998

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.47  E-value=7.7e-08  Score=90.94  Aligned_cols=73  Identities=18%  Similarity=0.227  Sum_probs=61.1

Q ss_pred             CCCcccCcccccCceEEEEEEEcC---------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccc----------
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH---------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR----------  382 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~---------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~----------  382 (399)
                      ++|...+.||+|+||.||++....         ++.||+|.+...     +.+.+|+.++.+++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            568888999999999999999753         778999998754     26889999999999999987          


Q ss_pred             -----eeEEEEe-CCeEEEEEeC
Q 044262          383 -----LLGFSFE-GTERLLIYEF  399 (399)
Q Consensus       383 -----l~g~~~~-~~~~~lv~Ey  399 (399)
                           +++++.. ....+|||||
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~  139 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPS  139 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEEC
T ss_pred             cCccchhhccccCCcEEEEEecC
Confidence                 6777776 6789999997

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.47  E-value=2.7e-07  Score=85.02  Aligned_cols=71  Identities=23%  Similarity=0.214  Sum_probs=58.3

Q ss_pred             Cccc-CcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHH-hcCCCCCccceeEEEEe----CCeEEEE
Q 044262          324 FSTD-NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLV-ARLQHRNLVRLLGFSFE----GTERLLI  396 (399)
Q Consensus       324 ~~~~-~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~lv  396 (399)
                      |... ++||+|+||.||++... +++.||+|.++..     ..+.+|+.++ ..++||||+++++++..    ....+||
T Consensus        19 y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   93 (299)
T 3m2w_A           19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV   93 (299)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             hhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence            4444 77999999999999874 5889999999642     3577888877 66799999999999876    5678999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        94 ~e~   96 (299)
T 3m2w_A           94 MEC   96 (299)
T ss_dssp             ECC
T ss_pred             Eee
Confidence            997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.47  E-value=2.6e-07  Score=88.99  Aligned_cols=67  Identities=24%  Similarity=0.201  Sum_probs=55.5

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHH-hcCCCCCccceeEEEEe----CCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLV-ARLQHRNLVRLLGFSFE----GTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~lv~Ey  399 (399)
                      ++||+|+||.||++... .++.||||.++..     ..+.+|+.++ ...+||||+++++++..    ....+|||||
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~  140 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC  140 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence            68999999999999975 4889999999642     3577888876 45689999999998865    4568999997

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.44  E-value=6.1e-07  Score=89.83  Aligned_cols=74  Identities=9%  Similarity=0.161  Sum_probs=52.1

Q ss_pred             cccCcccccCceEEEEEEEcCCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          325 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ...++||+|+||.||++.. .+..+++|.......        ...+.|.+|+++|.+++||||+++..++...+..+||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            3467999999999999955 578899998644311        1134589999999999999999777777788888999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       418 mE~  420 (540)
T 3en9_A          418 MSY  420 (540)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            998

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.43  E-value=3.1e-07  Score=85.76  Aligned_cols=77  Identities=19%  Similarity=0.311  Sum_probs=64.6

Q ss_pred             CCCcccCcccccCceEEEEEEE--cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCC------CccceeEEEEeCCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL--SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR------NLVRLLGFSFEGTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~--~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~------niv~l~g~~~~~~~~  393 (399)
                      ++|...++||+|+||.||++..  .+++.||||.++.. ....+.+.+|+.++..++|+      +++++++++...+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4677889999999999999986  25789999999654 33456788999998888665      499999999999999


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        93 ~lv~e~   98 (339)
T 1z57_A           93 CIVFEL   98 (339)
T ss_dssp             EEEEEC
T ss_pred             EEEEcC
Confidence            999997

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.42  E-value=4e-08  Score=100.08  Aligned_cols=78  Identities=24%  Similarity=0.410  Sum_probs=64.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe------CCeE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE------GTER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~~  393 (399)
                      ++|...++||+|+||.||++... +|+.||||.+... .....+.+.+|+.++.+++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            56888999999999999999874 4889999998764 44556679999999999999999999998754      5667


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        94 ~LVmEy   99 (676)
T 3qa8_A           94 LLAMEY   99 (676)
T ss_dssp             CCEEEC
T ss_pred             EEEEEe
Confidence            899997

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.42  E-value=5.2e-07  Score=84.37  Aligned_cols=75  Identities=33%  Similarity=0.508  Sum_probs=57.6

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHH--HhcCCCCCccceeEEEEe-----CCeE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLL--VARLQHRNLVRLLGFSFE-----GTER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~--l~~l~H~niv~l~g~~~~-----~~~~  393 (399)
                      .++|...++||+|+||.||++.. +++.||||.+....   ...+..|.++  +..++|+||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            45677889999999999999987 68899999996532   3345555554  445899999999986643     2357


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        88 ~lv~e~   93 (336)
T 3g2f_A           88 LLVMEY   93 (336)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            899997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.38  E-value=1.3e-07  Score=88.15  Aligned_cols=80  Identities=26%  Similarity=0.461  Sum_probs=65.4

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh------hhHHHHHHHHHHHhcCC--CCCccceeEEEEeC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV------QGELEFKNEVLLVARLQ--HRNLVRLLGFSFEG  390 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~  390 (399)
                      ..+.|...++||+|+||.||++... +++.||||.+.....      .....+.+|+.++.+++  |+||+++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            3456788899999999999999864 588999999965321      11235778999999986  59999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..++|+||
T Consensus       121 ~~~~lv~e~  129 (320)
T 3a99_A          121 DSFVLILER  129 (320)
T ss_dssp             SEEEEEEEC
T ss_pred             CcEEEEEEc
Confidence            999999996

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.34  E-value=5.3e-07  Score=85.54  Aligned_cols=77  Identities=18%  Similarity=0.309  Sum_probs=63.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-----------CCCccceeEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----------HRNLVRLLGFSFE  389 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~  389 (399)
                      ++|...+.||+|+||.||++... +++.||||.+... ....+.+.+|+.++.+++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            46778899999999999999974 5889999999653 334567889999988876           8999999999876


Q ss_pred             CC----eEEEEEeC
Q 044262          390 GT----ERLLIYEF  399 (399)
Q Consensus       390 ~~----~~~lv~Ey  399 (399)
                      .+    ..+|||||
T Consensus        98 ~~~~~~~~~lv~e~  111 (373)
T 1q8y_A           98 KGPNGVHVVMVFEV  111 (373)
T ss_dssp             EETTEEEEEEEECC
T ss_pred             cCCCCceEEEEEec
Confidence            43    68899986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.33  E-value=1.1e-06  Score=80.39  Aligned_cols=77  Identities=22%  Similarity=0.393  Sum_probs=63.0

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEE-EeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS-FEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E  398 (399)
                      .++|...+.||+|+||.||++.. .+++.||||.+.....  ...+.+|+.++..++|++++..+..+ ...+..+||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            35678889999999999999996 4688999999865432  23689999999999998877777665 45677899999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        86 ~   86 (296)
T 3uzp_A           86 L   86 (296)
T ss_dssp             C
T ss_pred             e
Confidence            7

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.31  E-value=1.1e-06  Score=83.54  Aligned_cols=63  Identities=11%  Similarity=0.042  Sum_probs=40.8

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHH---HHHhcCCCCCcccee
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEV---LLVARLQHRNLVRLL  384 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~---~~l~~l~H~niv~l~  384 (399)
                      ...|...++||+|+||.||++... +++.||||.+.....   ...+.+.+|+   ..|.. +||||++++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~  130 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDR  130 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhc
Confidence            345778899999999999999975 588999999987532   3344677774   45555 799977754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.28  E-value=1.2e-06  Score=82.37  Aligned_cols=78  Identities=15%  Similarity=0.247  Sum_probs=64.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEcC-C-cEEEEEEecCCChhhHHHHHHHHHHHhcCCCCC------ccceeEEEEeCCe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSH-G-QEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN------LVRLLGFSFEGTE  392 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g-~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~  392 (399)
                      .++|...+.||+|+||.||++.... + ..||+|.++.. ....+.+.+|+.++..++|++      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            3567888999999999999998743 4 68999999653 344567889999999887765      8999999999999


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .+|||||
T Consensus        97 ~~lv~e~  103 (355)
T 2eu9_A           97 MCIAFEL  103 (355)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEec
Confidence            9999997

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.27  E-value=2.1e-06  Score=80.48  Aligned_cols=73  Identities=23%  Similarity=0.229  Sum_probs=55.1

Q ss_pred             CCCcc-cCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHH-HHHhcCCCCCccceeEEEEe----CCeEE
Q 044262          322 NNFST-DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEV-LLVARLQHRNLVRLLGFSFE----GTERL  394 (399)
Q Consensus       322 ~~~~~-~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~-~~l~~l~H~niv~l~g~~~~----~~~~~  394 (399)
                      ++|.. .++||+|+||.||++... +++.||||.+....     ...+|+ ..+..++|+||+++++++..    ....+
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            44555 357999999999999986 48899999996532     222333 34566799999999999876    34589


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus       103 lv~e~  107 (336)
T 3fhr_A          103 IIMEC  107 (336)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99997

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.27  E-value=1.3e-06  Score=79.80  Aligned_cols=77  Identities=22%  Similarity=0.393  Sum_probs=59.9

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEE-EeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS-FEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E  398 (399)
                      .++|...+.||+|+||.||++.. ..++.||||.+.....  ...+.+|+.++..++|++++..++.+ ..++..+||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            46688889999999999999996 4588999998755422  23588999999999998888777766 56778899999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        86 ~   86 (296)
T 4hgt_A           86 L   86 (296)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.25  E-value=2.5e-06  Score=84.12  Aligned_cols=76  Identities=25%  Similarity=0.426  Sum_probs=61.1

Q ss_pred             CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR-NLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++.. .+++.||||.+......  .++.+|++++..++|+ ++..+..+....+..+|||||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            5688889999999999999997 45889999988654322  2588999999999874 555566666778889999997

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.20  E-value=2.2e-06  Score=78.36  Aligned_cols=76  Identities=16%  Similarity=0.097  Sum_probs=57.2

Q ss_pred             hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCCh------------------hhHHHHHHHHHHHhcCCCCCcc
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV------------------QGELEFKNEVLLVARLQHRNLV  381 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~niv  381 (399)
                      ....+...+.||+|+||.||++...+|+.||+|.++....                  .....+.+|+.+|.+++  | +
T Consensus        88 ~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~  164 (282)
T 1zar_A           88 SGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-L  164 (282)
T ss_dssp             TTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-S
T ss_pred             CCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-C
Confidence            3444556799999999999999996689999999964321                  13456899999999998  4 6


Q ss_pred             ceeEEEEeCCeEEEEEeC
Q 044262          382 RLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       382 ~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++.+++ ..+..+|||||
T Consensus       165 ~v~~~~-~~~~~~lvmE~  181 (282)
T 1zar_A          165 AVPKVY-AWEGNAVLMEL  181 (282)
T ss_dssp             SSCCEE-EEETTEEEEEC
T ss_pred             CcCeEE-eccceEEEEEe
Confidence            666654 33556999997

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.87  E-value=1e-05  Score=72.79  Aligned_cols=72  Identities=15%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             CcccCcccccCceEEEEEEE-cCCcE--EEEEEecCCChh------------------------hHHHHHHHHHHHhcCC
Q 044262          324 FSTDNKLGQGGFGAVYKGRL-SHGQE--IAVKRLSKNSVQ------------------------GELEFKNEVLLVARLQ  376 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~-~~g~~--vavK~l~~~~~~------------------------~~~~f~~E~~~l~~l~  376 (399)
                      +...+.||+|+||.||++.. .+|+.  ||||.++.....                        ....+.+|+..|..++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            34568899999999999998 67888  999987543111                        1136889999999998


Q ss_pred             CCCc--cceeEEEEeCCeEEEEEeC
Q 044262          377 HRNL--VRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       377 H~ni--v~l~g~~~~~~~~~lv~Ey  399 (399)
                      |+++  ..++..    +..+|||||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~  149 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEF  149 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEEC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEe
Confidence            8864  333332    356899997

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.59  E-value=7.2e-05  Score=75.26  Aligned_cols=72  Identities=17%  Similarity=0.151  Sum_probs=49.3

Q ss_pred             CcccccCceEEEEEE-EcCCcEEEEEEecCCC----------hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEE
Q 044262          328 NKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNS----------VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~----------~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  395 (399)
                      ...+.|.+|.+.+.. +--|+.+++|.+....          ....++|.+|+++|.++ .|+||++++++..+....||
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            344556665554432 1237889999996531          12345799999999999 79999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       320 VMEy  323 (569)
T 4azs_A          320 VMEK  323 (569)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9998

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.39  E-value=9.2e-05  Score=71.37  Aligned_cols=58  Identities=19%  Similarity=0.128  Sum_probs=45.7

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCC
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQH  377 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H  377 (399)
                      ....|...++||+|+||.||++... +|+.||||++.....   ...+.|.+|+.++..++|
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            3345667789999999999999964 589999999874322   234679999999999987

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.24  E-value=7.5e-05  Score=70.96  Aligned_cols=34  Identities=15%  Similarity=0.181  Sum_probs=30.0

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSK  356 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~  356 (399)
                      -+.+...||+|+||.||+|...+|+.||||.++.
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence            3677899999999999999988899999998753

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.84  E-value=0.017  Score=51.35  Aligned_cols=78  Identities=12%  Similarity=0.052  Sum_probs=59.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ...+.....++.|+.+.||+... .+..+++|............+.+|..++..+. |..+.+++++....+..++||||
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             hccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            34566667788888899999875 46789999986421122235889999998884 66778899998888889999997

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.29  E-value=0.023  Score=50.06  Aligned_cols=73  Identities=14%  Similarity=0.055  Sum_probs=52.1

Q ss_pred             CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCC--ccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN--LVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +....+.+.|..+.||+....+|..+++|......   ...+.+|+.++..+.+.+  +.+++++...++..++||||
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            33333334566799999987667889999875532   235788998888886545  45688887777778999997

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=92.99  E-value=0.042  Score=34.08  Aligned_cols=11  Identities=45%  Similarity=0.739  Sum_probs=4.5

Q ss_pred             HHhhhhhheec
Q 044262          283 LVTCVFLRRRK  293 (399)
Q Consensus       283 l~~~~~~~r~r  293 (399)
                      +.++++.|||+
T Consensus        29 ~~~~~~~RRr~   39 (44)
T 2ks1_B           29 LGIGLFMRRRH   39 (44)
T ss_dssp             HHHHHHHHTTT
T ss_pred             HHHHHHhhhhH
Confidence            33344444443

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=92.82  E-value=0.03  Score=34.67  Aligned_cols=11  Identities=36%  Similarity=0.751  Sum_probs=4.3

Q ss_pred             HHhhhhhheec
Q 044262          283 LVTCVFLRRRK  293 (399)
Q Consensus       283 l~~~~~~~r~r  293 (399)
                      +.++++.|||+
T Consensus        28 ~~~~~~~RRRr   38 (44)
T 2l2t_A           28 LTFAVYVRRKS   38 (44)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHhhhhh
Confidence            33344444333

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.01  E-value=0.021  Score=55.59  Aligned_cols=60  Identities=8%  Similarity=0.100  Sum_probs=18.0

Q ss_pred             cCcccccCceEEEEEEEcC-CcEEEE------EEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262          327 DNKLGQGGFGAVYKGRLSH-GQEIAV------KRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE  389 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~-g~~vav------K~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  389 (399)
                      .+.||   ||.||+|.+.. ..+|||      |..+..  +.+....|.+|..++.+++|+|+++..++...
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            46676   99999999864 367888      766543  23334578999999999999999999887654

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=90.43  E-value=0.34  Score=43.51  Aligned_cols=72  Identities=21%  Similarity=0.302  Sum_probs=49.3

Q ss_pred             CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCC---CccceeEEEEeCCeEEEEEeC
Q 044262          324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR---NLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +...+.+|.|..+.||+-.+.+|+.+.+|............|..|...|..|...   -+.+.+++  ..  -++||||
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~   91 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEW   91 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEEC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEe
Confidence            4445778999999999999999999999986544333334578899888877422   23344443  22  3667775

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=87.03  E-value=0.57  Score=43.41  Aligned_cols=72  Identities=14%  Similarity=0.226  Sum_probs=48.5

Q ss_pred             cCcccccCceEEEEEEEcCCcEEEEEEec--CCC-hhhHHHHHHHHHHHhcCC--CCCccceeEEEEeC---CeEEEEEe
Q 044262          327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLS--KNS-VQGELEFKNEVLLVARLQ--HRNLVRLLGFSFEG---TERLLIYE  398 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~--~~~-~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~E  398 (399)
                      .+.|+.|.++.+|+.... +..+++|+..  ... ......+.+|..++..+.  +..+.++++++...   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            467889999999998774 4577888765  321 122346888999998886  44577888887655   34789999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus       122 ~  122 (359)
T 3dxp_A          122 F  122 (359)
T ss_dssp             C
T ss_pred             e
Confidence            7

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=86.46  E-value=0.17  Score=31.22  Aligned_cols=7  Identities=29%  Similarity=0.857  Sum_probs=2.7

Q ss_pred             hhhhhee
Q 044262          286 CVFLRRR  292 (399)
Q Consensus       286 ~~~~~r~  292 (399)
                      .++.|||
T Consensus        32 ~~~~RRR   38 (44)
T 2jwa_A           32 GILIKRR   38 (44)
T ss_dssp             HHHHHHH
T ss_pred             Hhheehh
Confidence            3333333

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=80.88  E-value=1.5  Score=41.15  Aligned_cols=71  Identities=15%  Similarity=0.143  Sum_probs=44.3

Q ss_pred             cCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-------hhHHHHHHHHHHHhcCCC--CCcc-ceeEEEEeCCeEEE
Q 044262          327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-------QGELEFKNEVLLVARLQH--RNLV-RLLGFSFEGTERLL  395 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~l  395 (399)
                      .+.||.|..+.||+.... ++..++||.......       .....+..|.+++..+.+  +..+ +++.+  ..+..+|
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            457899999999999754 467899997653211       112346778888876632  3333 45443  3455688


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus       113 vmE~  116 (397)
T 2olc_A          113 VMED  116 (397)
T ss_dssp             EECC
T ss_pred             EEEe
Confidence            9986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	399
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-21
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-19
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-19
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-19
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-19
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-18
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-17
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-17
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-17
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-16
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-15
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-14
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-14
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-12
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-11
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-10

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 1e-21
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
           +  +   ++G G FG V+ G   +  ++A+K + + ++  E +F  E  ++ +L H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLV 63

Query: 382 RLLGFSFEGTERLLIYEF 399
           +L G   E     L++EF
Sbjct: 64  QLYGVCLEQAPICLVFEF 81

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 2e-21
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
            + +   +LG G FG V  G+     ++A+K + + S   E EF  E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 382 RLLGFSFEGTERLLIYEF 399
           +L G   +     +I E+
Sbjct: 63  QLYGVCTKQRPIFIITEY 80

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 8e-21
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
                  +LG G FG V+ G  +   ++AVK L + S+  +  F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLV 71

Query: 382 RLLGFSFEGTERLLIYEF 399
           RL           +I E+
Sbjct: 72  RLYAV-VTQEPIYIITEY 88

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.2 bits (210), Expect = 2e-19
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            + +  +KLG G +G VY+G    +   +AVK L +++++ E EF  E  ++  ++H NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 75

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V+LLG         +I EF
Sbjct: 76  VQLLGVCTREPPFYIITEF 94

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 4e-19
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 320 ATNNFS-TDNKLGQGGFGAVYKGRL---SHGQEIAVKRLSKNSVQGELE-FKNEVLLVAR 374
             +N    D +LG G FG+V +G         ++A+K L + + + + E    E  ++ +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
           L +  +VRL+G   +    +L+ E 
Sbjct: 66  LDNPYIVRLIGV-CQAEALMLVMEM 89

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 4e-19
 Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR 374
           ++ D    ++   K+GQG  G VY    ++ GQE+A+++++      +    NE+L++  
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
            ++ N+V  L     G E  ++ E+
Sbjct: 74  NKNPNIVNYLDSYLVGDELWVVMEY 98

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.0 bits (207), Expect = 7e-19
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 14/102 (13%)

Query: 312 FDFSTIRDATNNFST---------DNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS 358
           F F    +A   F+          +  +G G FG V  G L         +A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 359 VQGEL-EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
            + +  +F +E  ++ +  H N++ L G   + T  ++I EF
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF 108

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.3 bits (208), Expect = 7e-19
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE---LEFKNEVLLVAR 374
           D    FS   ++G G FGAVY  R + + + +A+K++S +  Q      +   EV  + +
Sbjct: 12  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
           L+H N ++  G         L+ E+
Sbjct: 72  LRHPNTIQYRGCYLREHTAWLVMEY 96

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 1e-18
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
            +   + KLGQG FG V+ G  +    +A+K L   ++  E  F  E  ++ +L+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLV 75

Query: 382 RLLGFSFEGTERLLIYEF 399
           +L           ++ E+
Sbjct: 76  QLYAV-VSEEPIYIVTEY 92

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-18
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 320 ATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQH 377
             ++F   ++LG G  G V+K      G  +A K +              E+ ++     
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
             +V   G  +   E  +  E 
Sbjct: 64  PYIVGFYGAFYSDGEISICMEH 85

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 4e-18
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
                   +G+G FG V  G    G ++AVK +  ++      F  E  ++ +L+H NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA--FLAEASVMTQLRHSNLV 63

Query: 382 RLLGFSFEGTERL-LIYEF 399
           +LLG   E    L ++ E+
Sbjct: 64  QLLGVIVEEKGGLYIVTEY 82

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 1e-17
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGELE-FKNEVLLVAR 374
           N  S    LG G FG V +              +AVK L  ++   E E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 375 L-QHRNLVRLLGFSFEGTERLLIYEF 399
           L  H N+V LLG    G   L+I E+
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEY 108

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 1e-17
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 327 DNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRNLV 381
           D +LG G FG V KG        + +AVK L   +    L  E   E  ++ +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 382 RLLGFSFEGTERLLIYEF 399
           R++G   E    +L+ E 
Sbjct: 72  RMIGI-CEAESWMLVMEM 88

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 2e-17
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV 381
              +   ++G G FG VYKG+      + +  ++  + Q    FKNEV ++ + +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 382 RLLGFSFEGTERLLIYEF 399
             +G+S    +  ++ ++
Sbjct: 68  LFMGYS-TAPQLAIVTQW 84

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 80.1 bits (197), Expect = 3e-17
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
           +++    +LG G FG V++    + G   A K +       +   + E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 381 VRLLGFSFEGTERLLIYEF 399
           V L     +  E ++IYEF
Sbjct: 86  VNLHDAFEDDNEMVMIYEF 104

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.1 bits (194), Expect = 4e-17
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 310 LQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQGEL 363
           L     ++    NN      +G+G FG V++ R            +AVK L + +     
Sbjct: 1   LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 364 -EFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399
            +F+ E  L+A   + N+V+LLG    G    L++E+
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 97

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 5e-17
 Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVA 373
            + D    ++  + +G+G +G V       +   +A+K++S    Q   +    E+ ++ 
Sbjct: 2   QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 61

Query: 374 RLQHRNLVRLLGFSFEGTERLLIYEF 399
           R +H N++ +       T   +   +
Sbjct: 62  RFRHENIIGINDIIRAPTIEQMKDVY 87

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 5e-17
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH 377
           +  + +    +LG G FG VYK +        A K +   S +   ++  E+ ++A   H
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
            N+V+LL   +      ++ EF
Sbjct: 69  PNIVKLLDAFYYENNLWILIEF 90

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.5 bits (193), Expect = 6e-17
 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQ 376
           D  + +   + LG G F  V         + +A+K ++K +++G+    +NE+ ++ +++
Sbjct: 6   DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 65

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H N+V L      G    LI + 
Sbjct: 66  HPNIVALDDIYESGGHLYLIMQL 88

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 6e-17
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 307 VESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNSVQGE 362
           V+++Q           +F  +  +G+G FG VY G L          AVK L++ +  GE
Sbjct: 14  VQAVQHVVIGPSSLIVHF--NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 71

Query: 363 LE-FKNEVLLVARLQHRNLVRLLGFSFEG-TERLLIYEF 399
           +  F  E +++    H N++ LLG         L++  +
Sbjct: 72  VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 110

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 7e-17
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE-FKNEVLLVARLQHRN 379
            ++     LG+G +G V         + +AVK +         E  K E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V+  G   EG  + L  E+
Sbjct: 65  VVKFYGHRREGNIQYLFLEY 84

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 78.2 bits (192), Expect = 1e-16
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS 387
           +LG G FG V++    + G+    K ++      +   KNE+ ++ +L H  L+ L    
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 388 FEGTERLLIYEF 399
            +  E +LI EF
Sbjct: 96  EDKYEMVLILEF 107

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 1e-16
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSF 388
            +G+G FG V++G+   G+E+AVK  S    +     + E+     L+H N++  +    
Sbjct: 10  SIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADN 67

Query: 389 EG----TERLLIYEF 399
           +     T+  L+ ++
Sbjct: 68  KDNGTWTQLWLVSDY 82

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 2e-16
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQE-----IAVKRLSKNSVQGEL-EFKNEVLLVARL 375
           +  +    +G G FG VYKG L          +A+K L     + +  +F  E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 376 QHRNLVRLLGFSFEGTERLLIYEF 399
            H N++RL G   +    ++I E+
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEY 90

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 76.5 bits (187), Expect = 3e-16
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVK--RLSKNSVQGELEFKNEVLLVARLQHRN 379
             +    K+G+G +G VYK + ++G+  A+K  RL K           E+ ++  L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V+L          +L++E 
Sbjct: 62  IVKLYDVIHTKKRLVLVFEH 81

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 3e-16
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVAR 374
              +   +LGQG FG VY+G             +A+K +++  S++  +EF NE  ++  
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
               ++VRLLG   +G   L+I E 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMEL 104

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.1 bits (189), Expect = 3e-16
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQ- 376
           N+FS    +G+GGFG VY  R +  G+  A+K L K  +   QGE    NE ++++ +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 377 --HRNLVRLLGFSFEGTERLLIYEF 399
                +V +        +   I + 
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDL 88

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 4e-16
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNSV---QGELEFKNEVLLVAR 374
            +     KLG G FG V +G           +AVK L  + +   +   +F  EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
           L HRNL+RL G       + ++ E 
Sbjct: 68  LDHRNLIRLYGVVLTPPMK-MVTEL 91

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 6e-16
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE---LEFKNEVLLVARLQHR 378
           +F     LG+G F  V   R L+  +E A+K L K  +  E        E  +++RL H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 379 NLVRLLGFSFEGTERLLIYEF 399
             V+L     +  +      +
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSY 89

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 1e-15
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNSVQGELE-FKNEVLLVAR 374
            N      LG G FG V               ++AVK L + +   E E   +E+ ++ +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 375 L-QHRNLVRLLGFSFEGTERLLIYEF 399
           L  H N+V LLG         LI+E+
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEY 122

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 3e-15
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELE-----FKNEVLLVARLQHRNLV 381
           + LG+G F  VYK R  +  Q +A+K++         +        E+ L+  L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 382 RLLGFSFEGTERLLIYEF 399
            LL      +   L+++F
Sbjct: 64  GLLDAFGHKSNISLVFDF 81

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 4e-15
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSHG---QEIAVKRLSKN-SVQGELEFKNEVLLVARL-Q 376
           N+    + +G+G FG V K R+       + A+KR+ +  S     +F  E+ ++ +L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H N++ LLG         L  E+
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEY 92

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 4e-15
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSVQGELE-FKNEVLLVARLQ 376
                   +G+G FG V++G           +A+K     +     E F  E L + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H ++V+L+G         +I E 
Sbjct: 67  HPHIVKLIGV-ITENPVWIIMEL 88

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.5 bits (177), Expect = 5e-15
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 321 TNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGE---LEFKNEVLLVARLQ 376
           ++ +     LG GG   V+  R L   +++AVK L  +  +     L F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 377 HRNLVRLLGF----SFEGTERLLIYEF 399
           H  +V +       +  G    ++ E+
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEY 92

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.8 bits (178), Expect = 6e-15
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQH 377
            +F     LG G FG V+  R   +G+  A+K L K  V   +      +E L+++ + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
             ++R+ G   +  +  +I ++
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDY 85

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 1e-14
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRN 379
           NF    K+G+G +G VYK R    G+ +A+K++  ++           E+ L+  L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           +V+LL       +  L++EF
Sbjct: 63  IVKLLDVIHTENKLYLVFEF 82

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-14
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 324 FSTDNKLGQGGFGAVYKGR-LSHGQE----IAVKRLSK-NSVQGELEFKNEVLLVARLQH 377
           F     LG G FG VYKG  +  G++    +A+K L +  S +   E  +E  ++A + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
            ++ RLLG     T +L+    
Sbjct: 71  PHVCRLLGICLTSTVQLITQLM 92

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 1e-14
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL------EFKNEVLLVAR 374
           + + T  +LG G F  V K R  S G + A K + K   +         + + EV ++  
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 375 LQHRNLVRLLGFSFEGTERLLIYEF 399
           +QH N++ L       T+ +LI E 
Sbjct: 70  IQHPNVITLHEVYENKTDVILILEL 94

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 2e-14
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQH 377
            +F     LG+G FG VY  R       +A+K L K  +     E + + EV + + L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
            N++RL G+  + T   LI E+
Sbjct: 66  PNILRLYGYFHDATRVYLILEY 87

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 3e-14
 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 318 RDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQ 376
           R    +++    +G G FG VY+ +L   G+ +A+K++ ++    +     E+ ++ +L 
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLD 71

Query: 377 HRNLVRLLGFSFEGTER 393
           H N+VRL  F +   E+
Sbjct: 72  HCNIVRLRYFFYSSGEK 88

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 4e-14
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHRN 379
           ++     +G G +G   K R  S G+ +  K L   S+         +EV L+  L+H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 380 LVRLLGFSFEGTERL--LIYEF 399
           +VR      + T     ++ E+
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEY 86

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (169), Expect = 6e-14
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)

Query: 327 DNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRL 383
           D ++G+G F  VYKG  +    E+A   L    +       FK E  ++  LQH N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 384 LGFSFEGTER----LLIYEF 399
                   +     +L+ E 
Sbjct: 74  YDSWESTVKGKKCIVLVTEL 93

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 1e-13
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS 387
            LG+G FG V++    S  +    K +       ++  K E+ ++   +HRN++ L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 388 FEGTERLLIYEF 399
               E ++I+EF
Sbjct: 71  ESMEELVMIFEF 82

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 3e-13
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 10/88 (11%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRL--------SHGQEIAVKRLSKNSVQGEL-EFKNEVLLV 372
           +       LG+G FG V             +   ++AVK L  ++ + +L +  +E+ ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 373 ARL-QHRNLVRLLGFSFEGTERLLIYEF 399
             + +H+N++ LLG   +     +I E+
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEY 100

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 3e-13
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL--EFKNEVLLV 372
           T  +    +     +G G +GAV        G ++A+K+L +             E+ L+
Sbjct: 12  TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 71

Query: 373 ARLQHRNLVRLLGFSFEGTERLLIYEF 399
             ++H N++ LL             +F
Sbjct: 72  KHMRHENVIGLLDVFTPDETLDDFTDF 98

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.6 bits (164), Expect = 3e-13
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
           N +    K+G G FG +Y G  ++ G+E+A+K     +     +   E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVG 64

Query: 381 VRLLGFSF-EGTERLLIYEF 399
           +  + +   EG   +++ E 
Sbjct: 65  IPTIRWCGAEGDYNVMVMEL 84

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 4e-13
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 316 TIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKN--SVQGELEFKNEVLLV 372
           TI +    +   + +G G +G+V        G  +AVK+LS+   S+        E+ L+
Sbjct: 12  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71

Query: 373 ARLQHRNLVRLLGF 386
             ++H N++ LL  
Sbjct: 72  KHMKHENVIGLLDV 85

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 4e-13
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE------FKNEVLLVAR 374
           + +     LG GGFG+VY G  +S    +A+K + K+ +    E         EV+L+ +
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 375 LQ--HRNLVRLLGFSFEGTERLLIYEF 399
           +      ++RLL +       +LI E 
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILER 90

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 2e-12
 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARLQHR 378
             +    K+G+G +G V+K +     + +A+KR+  +     +      E+ L+  L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 379 NLVRLLGFSFEGTERLLIYEF 399
           N+VRL        +  L++EF
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEF 82

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 2e-12
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKN----EVLLVARLQ 376
            +F     LG+G FG V+        Q  A+K L K+ V  + + +     + +L    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 377 HRNLVRLLGFSFEGTERLLIYEF 399
           H  L  +            + E+
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEY 84

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 64.8 bits (157), Expect = 2e-12
 Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL 380
            ++    ++G+G FG +++G  L + Q++A+K   + S     + ++E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTG 62

Query: 381 VRLLGFSFEGTERLLIYEF 399
           +  + +  +     ++   
Sbjct: 63  IPNVYYFGQEGLHNVLVID 81

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 64.9 bits (157), Expect = 3e-12
 Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRN 379
           +++    KLG+G +  V++   +++ +++ VK L     +   + K E+ ++  L+   N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGPN 91

Query: 380 LVRLLGFSFEGTERLLIYEF 399
           ++ L     +   R     F
Sbjct: 92  IITLADIVKDPVSRTPALVF 111

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 4e-12
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 319 DATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGEL--EFKNEVLLVARL 375
           D  + +    K+GQG FG V+K R    GQ++A+K++   + +         E+ ++  L
Sbjct: 7   DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 66

Query: 376 QHRNLVRLLGFSFEGTERLLIYE 398
           +H N+V L+             +
Sbjct: 67  KHENVVNLIEICRTKASPYNRCK 89

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 4e-12
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE---FKNEVLLVARLQH 377
           N+F     LG+G FG V   R  + G+  A+K L K  +  + E      E  ++   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 378 RNLVRLLGFSFEGTERLLIYEF 399
             L  L            + E+
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEY 86

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 5e-12
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGR------LSHGQEIAVKRLSKNSVQGELE--FKNEVLLVA 373
           +       LG+G FG V +         +  + +AVK L + +   E         +L+ 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 374 RLQHRNLVRLLGFSFEGTERLLIY 397
              H N+V LLG   +    L++ 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVI 96

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.4 bits (150), Expect = 2e-11
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 329 KLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS 387
           KLG G F  V+  + + +   +A+K +  + V  E   ++E+ L+ R+   +  +     
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE-AAEDEIKLLQRVNDADNTKEDSMG 78

Query: 388 FEGTERLLIY 397
                +LL +
Sbjct: 79  ANHILKLLDH 88

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 3e-11
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 320 ATNNFSTDNKLGQGGFGAVYKGR--LSHGQEIAVKRLSKNSVQG--ELEFKNEVLLVARL 375
           A   +    ++G+G +G V+K R   + G+ +A+KR+   + +    L    EV ++  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 376 ---QHRNLVRLLGFSFEGTERLLIYEF 399
              +H N+VRL                
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLT 91

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.4 bits (148), Expect = 5e-11
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 291 RRKQKQDLTKADEINTVESLQFDFSTIRDAT---NNFSTDNKLGQGGFGAVYKGR-LSHG 346
           ++  +Q+  K       E     + T    T   + F     LG G FG V   +    G
Sbjct: 7   KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66

Query: 347 QEIAVKRLSKNSVQGELE---FKNEVLLVARLQHRNLVRLLGFSFE 389
              A+K L K  V    +     NE  ++  +    LV+L     +
Sbjct: 67  NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 6e-11
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 313 DFSTIRDATNNFSTDNK------LGQGGFGAVYKGR-LSHGQEIAVKRLSKNSV--QGEL 363
            F ++    + F+   +      +G G  G V         + +A+K+LS+         
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 61

Query: 364 EFKNEVLLVARLQHRNLVRLLGF 386
               E++L+  + H+N++ LL  
Sbjct: 62  RAYRELVLMKCVNHKNIISLLNV 84

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 58.6 bits (141), Expect = 7e-11
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 14/86 (16%)

Query: 328 NKLGQGGFGAVYKGRLSHGQEIAVK--RLSKNS--------VQGELEFKNEVLLVARLQH 377
             +G+G   AV+        E  VK  ++   S          G+L F    +  AR + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 378 RNLVRLLGF----SFEGTERLLIYEF 399
           R L +L G      +      ++ E 
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMEL 91

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 1e-10
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSV----QGELEFKNEVLLVA 373
            NF     LG G +G V+  R       G+  A+K L K ++    +     + E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 374 RLQHRNLVRLLGFSFEGTERLLIY 397
            ++    +  L ++F+   +L + 
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLI 107

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 57.8 bits (139), Expect = 5e-10
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 11/88 (12%)

Query: 323 NFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELE---------FKNEVLLV 372
           N+     LG+G    V +       +E AVK +                      EV ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 373 ARLQ-HRNLVRLLGFSFEGTERLLIYEF 399
            ++  H N+++L       T   L+++ 
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDL 91

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 9e-10
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 11/80 (13%)

Query: 326 TDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRL 383
           T   LG G  G V +       ++ A+K L         + + EV L  R  Q  ++VR+
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRI 70

Query: 384 LG----FSFEGTERLLIYEF 399
           +             L++ E 
Sbjct: 71  VDVYENLYAGRKCLLIVMEC 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	399
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.47
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.44
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.43
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.42
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.38
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.37
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.36
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.36
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.36
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.34
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.34
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.32
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.32
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.32
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.32
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.3
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.3
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.29
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.29
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.29
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.29
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.28
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.26
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.26
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.26
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.25
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.25
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.24
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.24
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.24
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.22
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.2
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.2
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.19
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.18
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.18
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.16
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.15
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.12
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.12
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.11
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.1
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.09
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.08
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.06
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.03
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.01
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.99
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.98
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.95
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.85
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.84
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.83
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.82
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.75
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.71
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.19
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.18

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=5.1e-14  Score=125.74  Aligned_cols=77  Identities=29%  Similarity=0.487  Sum_probs=69.5

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|+..++||+|+||.||+|+++++..||||.++.... ..++|++|+.++.+++|||||+++|++.+.++.++||||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence            46778899999999999999998888999999976543 356899999999999999999999999999999999998

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=4.2e-14  Score=128.37  Aligned_cols=86  Identities=29%  Similarity=0.509  Sum_probs=74.0

Q ss_pred             ChhhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262          313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT  391 (399)
Q Consensus       313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  391 (399)
                      .+++++...++|...++||+|+||.||+|.... ++.||||.++... ...++|.+|+.+|.+++|||||+++|++..++
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   86 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCC
Confidence            344555666778888999999999999999864 8899999997543 34568999999999999999999999999999


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus        87 ~~~iv~E~   94 (287)
T d1opja_          87 PFYIITEF   94 (287)
T ss_dssp             SCEEEEEC
T ss_pred             eeEEEeec
Confidence            99999998

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=7e-14  Score=125.91  Aligned_cols=82  Identities=29%  Similarity=0.420  Sum_probs=69.6

Q ss_pred             hHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +++.+.++|...++||+|+||.||+|.+++++.||||.++... ...+.|.+|+.+|.+++|||||+++|++. .++.+|
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~i   84 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEE
Confidence            3445566788889999999999999999888899999997643 34568999999999999999999999874 456799


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        85 v~Ey   88 (272)
T d1qpca_          85 ITEY   88 (272)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9998

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=7.1e-14  Score=125.23  Aligned_cols=77  Identities=27%  Similarity=0.513  Sum_probs=68.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||+|.+.++..||||+++... ...++|.+|+.+|.+++|||||+++|++..++..+|||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            4567778999999999999999888899999997643 3456899999999999999999999999999999999998

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3e-13  Score=122.67  Aligned_cols=78  Identities=26%  Similarity=0.400  Sum_probs=70.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|+..+.||+|+||.||++... +++.||||.++.......+.|.+|+++|++++|||||++++++...+..+|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            45677889999999999999975 4889999999876656667899999999999999999999999999999999998

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=2.5e-13  Score=123.95  Aligned_cols=78  Identities=27%  Similarity=0.493  Sum_probs=66.2

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-C---cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-G---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||+|.... +   ..||||.+... .....+.|.+|+.+|++++|||||+++|++..++..+||
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            345667899999999999999753 2   36899998664 445567899999999999999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus       106 ~Ey  108 (299)
T d1jpaa_         106 TEF  108 (299)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            998

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=6.8e-13  Score=120.50  Aligned_cols=78  Identities=26%  Similarity=0.441  Sum_probs=69.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... +|+.||||.++.......+.+.+|+.+|++++|||||++++++...+..+|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            46888899999999999999864 5899999999765444566899999999999999999999999999999999998

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.1e-13  Score=122.35  Aligned_cols=79  Identities=25%  Similarity=0.445  Sum_probs=68.2

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ...++|...+.||+|+||.||+|..+++..||||.++... ...+.|.+|+.+|.+++|||||+++|++ ..++.+||||
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~-~~~~~~lv~E   91 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTE   91 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEC
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEE-ecCCeEEEEE
Confidence            3456788889999999999999999888889999996543 3456899999999999999999999998 4566899999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        92 y   92 (285)
T d1fmka3          92 Y   92 (285)
T ss_dssp             C
T ss_pred             e
Confidence            7

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4.9e-13  Score=120.97  Aligned_cols=78  Identities=27%  Similarity=0.515  Sum_probs=66.8

Q ss_pred             CCCcccCcccccCceEEEEEEEcCC-----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHG-----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g-----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +.|+..++||+|+||.||+|.++..     ..||||.+... ......+|++|+.+|.+++|||||+++|++...+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4567789999999999999998542     36999999754 44445679999999999999999999999999999999


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        87 v~e~   90 (283)
T d1mqba_          87 ITEY   90 (283)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9997

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=5.5e-13  Score=120.66  Aligned_cols=78  Identities=26%  Similarity=0.460  Sum_probs=64.1

Q ss_pred             cCCCcccC-cccccCceEEEEEEEc---CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          321 TNNFSTDN-KLGQGGFGAVYKGRLS---HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       321 ~~~~~~~~-~iG~G~fG~Vykg~~~---~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      .+++...+ +||+|+||.||+|.+.   ++..||||.++.. .....+.|.+|+++|.+++|||||+++|++. .+.++|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeEEE
Confidence            34555566 4999999999999874   3457999999765 4455678999999999999999999999985 556899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        86 vmE~   89 (285)
T d1u59a_          86 VMEM   89 (285)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9998

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=8.2e-13  Score=118.60  Aligned_cols=78  Identities=26%  Similarity=0.434  Sum_probs=66.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|+..++||+|+||.||++... +|+.||||.+.... ....+.+.+|+.+|++++|||||++++++..++..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            45777899999999999999975 58999999997653 23345699999999999999999999999999999999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.7e-13  Score=123.42  Aligned_cols=80  Identities=19%  Similarity=0.234  Sum_probs=70.2

Q ss_pred             hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ..++|+..++||+|+||.||++... +|+.||+|.++.. .......+.+|+.+|++++|||||++++++...+..+|||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            3467888899999999999999974 5889999999764 3344567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        84 Ey   85 (322)
T d1s9ja_          84 EH   85 (322)
T ss_dssp             EC
T ss_pred             Ec
Confidence            97

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=7.2e-13  Score=119.35  Aligned_cols=79  Identities=28%  Similarity=0.540  Sum_probs=66.4

Q ss_pred             HhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262          318 RDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL  395 (399)
Q Consensus       318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  395 (399)
                      +...++|...++||+|+||.||+|.++  ..||||.++..  .....+.|.+|+.+|.+++|||||+++|++. .+..+|
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~l   80 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI   80 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             ccccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEE
Confidence            345567888899999999999999874  36999998654  4455678999999999999999999999875 456899


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        81 v~Ey   84 (276)
T d1uwha_          81 VTQW   84 (276)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9998

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.32  E-value=1.7e-12  Score=120.86  Aligned_cols=78  Identities=26%  Similarity=0.426  Sum_probs=70.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... .|+.||||.+........+.+.+|+.+|.+++|||||++++++...+..+|||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46778899999999999999974 5889999999877666677899999999999999999999999999999999998

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.32  E-value=7.9e-13  Score=120.68  Aligned_cols=86  Identities=29%  Similarity=0.517  Sum_probs=74.5

Q ss_pred             hhhHHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEE
Q 044262          314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGF  386 (399)
Q Consensus       314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~  386 (399)
                      +.+++.++++|+..+.||+|+||.||+|.++      +++.||||+++.. .....++|.+|+.+|.+++||||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            4567778889999999999999999999874      2468999999765 33445679999999999999999999999


Q ss_pred             EEeCCeEEEEEeC
Q 044262          387 SFEGTERLLIYEF  399 (399)
Q Consensus       387 ~~~~~~~~lv~Ey  399 (399)
                      +...+..+++|||
T Consensus        85 ~~~~~~~~~v~e~   97 (301)
T d1lufa_          85 CAVGKPMCLLFEY   97 (301)
T ss_dssp             ECSSSSCEEEEEC
T ss_pred             eccCCceEEEEEe
Confidence            9999999999997

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.32  E-value=1.1e-12  Score=119.92  Aligned_cols=78  Identities=27%  Similarity=0.459  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      +.|+..+.||+|+||.||++... +++.||||.+....   ....+.+.+|+.+|.+++|||||++++++...+..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            34777899999999999999864 58899999997653   233457999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        95 E~   96 (309)
T d1u5ra_          95 EY   96 (309)
T ss_dssp             EC
T ss_pred             Ee
Confidence            98

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.8e-12  Score=117.76  Aligned_cols=78  Identities=28%  Similarity=0.411  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      +.|...++||+|+||.||++... +|+.||||.+++..      ....+.|.+|+.+|.+++|||||++++++...+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            45778899999999999999974 58999999996532      123567999999999999999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        90 iv~E~   94 (293)
T d1jksa_          90 LILEL   94 (293)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            99998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2e-12  Score=115.94  Aligned_cols=78  Identities=23%  Similarity=0.381  Sum_probs=65.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv  396 (399)
                      ++|+..+.||+|+||.||++... +|+.||||.++..  .....+.+.+|+++|.+++|||||++++++.+  .+.++||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            46778899999999999999875 5889999999765  34445679999999999999999999999864  4558999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        84 mEy   86 (269)
T d2java1          84 MEY   86 (269)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            998

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.30  E-value=2.6e-12  Score=119.64  Aligned_cols=78  Identities=26%  Similarity=0.384  Sum_probs=70.3

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      +.|...++||+|+||.||++... +|+.||||.++.......+.+.+|+.+|.+++|||||++++++..++..+|||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45778899999999999999974 5899999999877666667889999999999999999999999999999999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=2.4e-12  Score=115.88  Aligned_cols=71  Identities=28%  Similarity=0.441  Sum_probs=58.2

Q ss_pred             CcccccCceEEEEEEEcC---CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          328 NKLGQGGFGAVYKGRLSH---GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       328 ~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++||+|+||.||+|.+.+   ++.||||.++..  +....+.|.+|+.+|.+++|||||+++|++. .+..+|||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~   88 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEM   88 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEEC
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEc
Confidence            579999999999998753   467999999653  3334567999999999999999999999985 4567899998

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.1e-12  Score=120.13  Aligned_cols=85  Identities=31%  Similarity=0.544  Sum_probs=71.9

Q ss_pred             hhHHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      ++++...++|...++||+|+||.||+|.++      .++.||||+++.. .......|.+|+.++.+++|||||+++|++
T Consensus        13 ~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~   92 (308)
T d1p4oa_          13 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   92 (308)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             cceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence            345556677888899999999999999873      2468999999754 444456799999999999999999999999


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                      ...++.+|||||
T Consensus        93 ~~~~~~~lv~e~  104 (308)
T d1p4oa_          93 SQGQPTLVIMEL  104 (308)
T ss_dssp             CSSSSCEEEEEC
T ss_pred             ecCCceeEEEee
Confidence            988999999997

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.29  E-value=1.1e-12  Score=119.91  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=64.0

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      .+.|...++||+|+||.||++... +++.||||.+..... .....+.+|+.+|.+++|||||++++++..++..+||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            345778899999999999999975 488999999976532 234568899999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        88 ~   88 (307)
T d1a06a_          88 L   88 (307)
T ss_dssp             C
T ss_pred             c
Confidence            8

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=2.2e-12  Score=115.23  Aligned_cols=78  Identities=33%  Similarity=0.541  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++..+ +++.||+|.+.+.   .....+.+.+|+.+|.+++|||||++++++..++..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            35777899999999999999985 4889999998643   1223467899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        86 Ey   87 (263)
T d2j4za1          86 EY   87 (263)
T ss_dssp             EC
T ss_pred             ee
Confidence            98

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.2e-12  Score=116.83  Aligned_cols=75  Identities=29%  Similarity=0.535  Sum_probs=62.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-CeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-TERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||+|.+ .|..||||+++...  ..+.|.+|+++|.+++|||||+++|++.+. +.++|||||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            4566678999999999999998 57889999996543  346799999999999999999999998654 558999998

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=6.4e-12  Score=115.54  Aligned_cols=77  Identities=22%  Similarity=0.352  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++... +++.||||.++.... ....+.+|+.+|..++|||||++++++...+..+|||||
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            55778899999999999999975 488999999976543 345688999999999999999999999999999999998

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=4.3e-12  Score=115.49  Aligned_cols=78  Identities=31%  Similarity=0.554  Sum_probs=66.5

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      ++|...++||+|+||.||++... .++.||||+++...  ....+.+.+|+.+|++++|||||++++++..++..+||||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            46788899999999999999974 58999999996542  2234679999999999999999999999999999999999


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (298)
T d1gz8a_          82 F   82 (298)
T ss_dssp             C
T ss_pred             e
Confidence            7

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=3.3e-12  Score=116.91  Aligned_cols=78  Identities=29%  Similarity=0.549  Sum_probs=64.0

Q ss_pred             CCCcccCcccccCceEEEEEEEcC-Cc--EEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ--EIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|+..++||+|+||.||+|.+++ +.  .||||+++.. .....+.|.+|+++|.++ +|||||+++|++...+.++||
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            466777999999999999999854 43  5889988654 334456799999999998 799999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        90 ~ey   92 (309)
T d1fvra_          90 IEY   92 (309)
T ss_dssp             ECC
T ss_pred             EEe
Confidence            997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=3e-12  Score=115.91  Aligned_cols=78  Identities=23%  Similarity=0.267  Sum_probs=67.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...+.||+|+||.||++... +++.||||.+...   .....+.+.+|+.+|++++|||||++++++...+..+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            35778899999999999999974 5889999998643   1233457999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        88 Ey   89 (288)
T d1uu3a_          88 SY   89 (288)
T ss_dssp             CC
T ss_pred             Ec
Confidence            98

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=7.5e-12  Score=112.13  Aligned_cols=75  Identities=29%  Similarity=0.386  Sum_probs=62.8

Q ss_pred             cccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEEEE
Q 044262          325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLLIY  397 (399)
Q Consensus       325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~  397 (399)
                      ...++||+|+||.||++... +++.||+|.+...  .....+.|.+|+++|++++|||||++++++..    ...++|||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            34568999999999999975 4789999998654  44455679999999999999999999999865    34589999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        92 E~   93 (270)
T d1t4ha_          92 EL   93 (270)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.5e-12  Score=114.61  Aligned_cols=80  Identities=23%  Similarity=0.350  Sum_probs=66.5

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER  393 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  393 (399)
                      ...++|...+.||+|+||.||+|.+..    +..||||.++.. .....+.|.+|+.+|++++|||||+++|++. .+..
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~   82 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   82 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeE
Confidence            445678888999999999999998743    356899998654 4444567999999999999999999999985 5678


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        83 ~iv~E~   88 (273)
T d1mp8a_          83 WIIMEL   88 (273)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.24  E-value=4.4e-12  Score=114.75  Aligned_cols=78  Identities=23%  Similarity=0.441  Sum_probs=68.9

Q ss_pred             CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||++..++|+.||||.++...  ....+.+.+|+.+|.+++|||||++++++...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4677789999999999999999889999999996642  22346799999999999999999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=9.8e-12  Score=113.76  Aligned_cols=73  Identities=27%  Similarity=0.548  Sum_probs=62.0

Q ss_pred             cCcccccCceEEEEEEEcCC----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-CeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-TERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~~g----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey  399 (399)
                      .++||+|+||+||+|.+.+.    ..||||+++.. .....++|.+|+++|.+++|||||+++|++... ...++||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            47899999999999998542    36899999754 555667899999999999999999999998764 578999997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=3.5e-12  Score=116.82  Aligned_cols=83  Identities=29%  Similarity=0.404  Sum_probs=70.3

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSF  388 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  388 (399)
                      ++...+++...++||+|+||.||+|.+.      .++.||||+++.. ......+|.+|+.++.++ +|||||+++|++.
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            3445677888899999999999999863      3468999999765 344556799999999998 7999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      ..+..+|||||
T Consensus        98 ~~~~~~lvmE~  108 (311)
T d1t46a_          98 IGGPTLVITEY  108 (311)
T ss_dssp             SSSSCEEEEEC
T ss_pred             eCCEEEEEEEc
Confidence            99999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.22  E-value=6.4e-12  Score=115.23  Aligned_cols=78  Identities=24%  Similarity=0.406  Sum_probs=67.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++..+ +|+.||||++++.   .....+.+.+|+.+|+.++|||||++++++...+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            35777899999999999999974 4899999999643   2233567999999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        84 E~   85 (316)
T d1fota_          84 DY   85 (316)
T ss_dssp             CC
T ss_pred             ee
Confidence            98

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.20  E-value=2e-11  Score=109.76  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=65.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC----eE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT----ER  393 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~  393 (399)
                      ++|...+.||+|+||.||++... +|+.||||.++..   +....+.|.+|+.+|..++|||||++++++...+    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            45778899999999999999864 5899999999764   2334557999999999999999999999987643    37


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|||||
T Consensus        87 ~lvmE~   92 (277)
T d1o6ya_          87 YIVMEY   92 (277)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            899998

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.20  E-value=1.9e-11  Score=109.81  Aligned_cols=78  Identities=21%  Similarity=0.243  Sum_probs=66.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---------hhHHHHHHHHHHHhcCC-CCCccceeEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---------QGELEFKNEVLLVARLQ-HRNLVRLLGFSFEG  390 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~  390 (399)
                      ++|...++||+|+||+||++... +++.+|||+++....         ...+.+.+|+.+|.+++ |||||++++++..+
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            46778899999999999999874 588999999976421         12345889999999997 99999999999999


Q ss_pred             CeEEEEEeC
Q 044262          391 TERLLIYEF  399 (399)
Q Consensus       391 ~~~~lv~Ey  399 (399)
                      +..+|||||
T Consensus        83 ~~~~ivmE~   91 (277)
T d1phka_          83 TFFFLVFDL   91 (277)
T ss_dssp             SEEEEEEEC
T ss_pred             cceEEEEEc
Confidence            999999998

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=7.1e-12  Score=112.52  Aligned_cols=77  Identities=32%  Similarity=0.525  Sum_probs=56.3

Q ss_pred             CCCcccCcccccCceEEEEEEEcC--C--cEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLSH--G--QEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~~--g--~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ++|+..+.||+|+||.||+|.+..  +  ..||||.++..   ..+..++|.+|+.+|.+++|||||+++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            457778899999999999998743  2  37899998754   23445689999999999999999999999965 4678


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        87 lv~e~   91 (273)
T d1u46a_          87 MVTEL   91 (273)
T ss_dssp             EEEEC
T ss_pred             eeeee
Confidence            99997

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=7.5e-12  Score=115.31  Aligned_cols=83  Identities=27%  Similarity=0.403  Sum_probs=67.3

Q ss_pred             HHhhcCCCcccCcccccCceEEEEEEEcC-C-----cEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 044262          317 IRDATNNFSTDNKLGQGGFGAVYKGRLSH-G-----QEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSF  388 (399)
Q Consensus       317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g-----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  388 (399)
                      ++...++|...++||+|+||.||+|.... +     ..||||.+... .......|.+|+.+|.++ +|||||+++|++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            34566788889999999999999998743 1     36999998654 333345799999999998 8999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      ..+..+|||||
T Consensus       112 ~~~~~~lv~Ey  122 (325)
T d1rjba_         112 LSGPIYLIFEY  122 (325)
T ss_dssp             SSSSCEEEEEC
T ss_pred             eCCeEEEEEEc
Confidence            99999999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.2e-11  Score=112.44  Aligned_cols=73  Identities=27%  Similarity=0.410  Sum_probs=60.2

Q ss_pred             cCcccccCceEEEEEEEc-CCcEEEEEEecCCChhh-----HHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262          327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG-----ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~-----~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      .++||+|+||.||++... .|+.||||+++......     .+.+.+|+.+|.+++|||||++++++...+..+|||||
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            478999999999999975 48899999986542211     23689999999999999999999999999999999998

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=2.1e-11  Score=112.67  Aligned_cols=78  Identities=24%  Similarity=0.239  Sum_probs=68.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++..+ +|+.||||.+++.   .....+.+.+|+.+|++++|||||++++++.+.+.++|||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            45778899999999999999974 5899999999653   2233567899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus        85 ey   86 (337)
T d1o6la_          85 EY   86 (337)
T ss_dssp             EC
T ss_pred             ec
Confidence            98

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=3.2e-11  Score=110.59  Aligned_cols=76  Identities=33%  Similarity=0.562  Sum_probs=59.7

Q ss_pred             CCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      +|+..++||+|+||.||+|.+.. |+    .||+|.++.. +.+..++|.+|+.+|.+++|||||+++|++.+++ .+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-eeEE
Confidence            47778999999999999998743 33    6899998654 3445678999999999999999999999997655 4555


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      +||
T Consensus        89 ~e~   91 (317)
T d1xkka_          89 TQL   91 (317)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            664

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=7.4e-11  Score=106.64  Aligned_cols=78  Identities=26%  Similarity=0.473  Sum_probs=67.8

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE  398 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  398 (399)
                      +.|...++||+|+||.||++... +++.||||+++..  .......+.+|+.+|+.++|||||++.+++...+..++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            35777899999999999999974 5789999999654  33345689999999999999999999999999999999998


Q ss_pred             C
Q 044262          399 F  399 (399)
Q Consensus       399 y  399 (399)
                      |
T Consensus        82 ~   82 (292)
T d1unla_          82 F   82 (292)
T ss_dssp             C
T ss_pred             e
Confidence            6

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=3.5e-11  Score=110.39  Aligned_cols=78  Identities=21%  Similarity=0.296  Sum_probs=65.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHh-cCCCCCccceeEEEEeCCeEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVA-RLQHRNLVRLLGFSFEGTERLLI  396 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lv  396 (399)
                      ++|...++||+|+||.||++... .++.||||++++.   .....+.+..|..++. .++|||||++++++..++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            46777899999999999999985 4889999999643   1223456778877665 68999999999999999999999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        82 mEy   84 (320)
T d1xjda_          82 MEY   84 (320)
T ss_dssp             EEC
T ss_pred             Eee
Confidence            998

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.9e-11  Score=109.27  Aligned_cols=73  Identities=25%  Similarity=0.504  Sum_probs=57.7

Q ss_pred             CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHH--HHhcCCCCCccceeEEEEeCC----eEEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVL--LVARLQHRNLVRLLGFSFEGT----ERLLI  396 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~--~l~~l~H~niv~l~g~~~~~~----~~~lv  396 (399)
                      .+...++||+|+||.||+|++ +|+.||||+++...   .+++.+|.+  .+..++|||||+++|++...+    .++||
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            455678999999999999997 68899999996432   234444544  556789999999999998643    58999


Q ss_pred             EeC
Q 044262          397 YEF  399 (399)
Q Consensus       397 ~Ey  399 (399)
                      |||
T Consensus        80 ~Ey   82 (303)
T d1vjya_          80 SDY   82 (303)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            998

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.3e-11  Score=110.59  Aligned_cols=81  Identities=22%  Similarity=0.379  Sum_probs=62.9

Q ss_pred             hhcCCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 044262          319 DATNNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSF  388 (399)
Q Consensus       319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  388 (399)
                      ...+.|...++||+|+||.||++....        +..||||+++.. ......++.+|...+.++ +|||||+++|++.
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~   89 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   89 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence            445677788999999999999998632        247999999765 344557899999988887 8999999999999


Q ss_pred             eCCeEEEEEeC
Q 044262          389 EGTERLLIYEF  399 (399)
Q Consensus       389 ~~~~~~lv~Ey  399 (399)
                      +.+..++||||
T Consensus        90 ~~~~~~~v~e~  100 (299)
T d1fgka_          90 QDGPLYVIVEY  100 (299)
T ss_dssp             SSSSCEEEECC
T ss_pred             cCCeEEEEEEc
Confidence            99999999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=5.5e-11  Score=110.44  Aligned_cols=78  Identities=23%  Similarity=0.301  Sum_probs=67.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... +|+.||||.+.+.   .....+.+.+|+.+|..++|||||++++++......++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            45778899999999999999975 5899999998643   1233457899999999999999999999999999999999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       121 e~  122 (350)
T d1rdqe_         121 EY  122 (350)
T ss_dssp             EC
T ss_pred             cc
Confidence            97

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=6.3e-11  Score=109.94  Aligned_cols=79  Identities=23%  Similarity=0.350  Sum_probs=60.9

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------  391 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  391 (399)
                      .+.|...++||+|+||.||++... +|+.||||+++..  .....+.+.+|+.+|+.++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            456888899999999999999974 5899999999753  3344567999999999999999999999987654      


Q ss_pred             eEEEEEeC
Q 044262          392 ERLLIYEF  399 (399)
Q Consensus       392 ~~~lv~Ey  399 (399)
                      ..+|||||
T Consensus        97 ~~~lv~e~  104 (346)
T d1cm8a_          97 DFYLVMPF  104 (346)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEEec
Confidence            46999997

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.2e-10  Score=108.56  Aligned_cols=78  Identities=21%  Similarity=0.337  Sum_probs=64.4

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe------CCe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE------GTE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~  392 (399)
                      +.|...++||+|+||+||+|... .|+.||||++...  .......+.+|+.+|.+++|||||++++++..      ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            46788899999999999999975 5899999999754  33445578999999999999999999999864      367


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      +++||||
T Consensus        97 ~~iv~Ey  103 (355)
T d2b1pa1          97 VYLVMEL  103 (355)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEec
Confidence            8999998

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.03  E-value=1.6e-10  Score=107.91  Aligned_cols=78  Identities=31%  Similarity=0.372  Sum_probs=62.9

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHH---HHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKN---EVLLVARLQHRNLVRLLGFSFEGTERL  394 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~---E~~~l~~l~H~niv~l~g~~~~~~~~~  394 (399)
                      ++|...++||+|+||.||++... +|+.||||.+.+..   ......+.+   |+.++..++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            46778899999999999999975 48999999986431   112223444   467788889999999999999999999


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        84 ivmE~   88 (364)
T d1omwa3          84 FILDL   88 (364)
T ss_dssp             EEECC
T ss_pred             EEEEe
Confidence            99998

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.1e-10  Score=105.00  Aligned_cols=79  Identities=27%  Similarity=0.482  Sum_probs=63.1

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-------
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-------  390 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------  390 (399)
                      .++|...++||+|+||.||+|... +|+.||||++...  .....+.+.+|+.+|++++|+||+++++.+...       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            356788899999999999999974 5899999998543  223346789999999999999999999988553       


Q ss_pred             -CeEEEEEeC
Q 044262          391 -TERLLIYEF  399 (399)
Q Consensus       391 -~~~~lv~Ey  399 (399)
                       +..++||||
T Consensus        89 ~~~~~iv~e~   98 (318)
T d3blha1          89 KGSIYLVFDF   98 (318)
T ss_dssp             --CEEEEEEC
T ss_pred             CceEEEEEec
Confidence             357899997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.99  E-value=3.3e-10  Score=104.14  Aligned_cols=75  Identities=20%  Similarity=0.399  Sum_probs=64.1

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeC--CeEEEEE
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEG--TERLLIY  397 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~  397 (399)
                      ++|...++||+|+||.||++... .++.||||+++...   .+.+.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            56888899999999999999974 58899999997543   347899999999995 99999999998754  4589999


Q ss_pred             eC
Q 044262          398 EF  399 (399)
Q Consensus       398 Ey  399 (399)
                      ||
T Consensus       112 e~  113 (328)
T d3bqca1         112 EH  113 (328)
T ss_dssp             EC
T ss_pred             ee
Confidence            97

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=8.2e-11  Score=105.47  Aligned_cols=78  Identities=27%  Similarity=0.479  Sum_probs=64.6

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh------hhHHHHHHHHHHHhcCC--CCCccceeEEEEeCCe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV------QGELEFKNEVLLVARLQ--HRNLVRLLGFSFEGTE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~  392 (399)
                      +.|...++||+|+||.||+|... +|+.||||.++....      .....+.+|+.+|.+++  |||||++++++..++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            35777899999999999999974 589999999864311      11234778999999886  8999999999999999


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++||||
T Consensus        84 ~~lv~e~   90 (273)
T d1xwsa_          84 FVLILER   90 (273)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEe
Confidence            9999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=2.9e-10  Score=105.55  Aligned_cols=73  Identities=26%  Similarity=0.553  Sum_probs=60.3

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeEEE
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TERLL  395 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l  395 (399)
                      .|...++||+|+||+||++... .|+.||||++.....    .+.+|+.+|++++|+|||++++++...      ..++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            3566789999999999999985 489999999976432    235799999999999999999998653      23789


Q ss_pred             EEeC
Q 044262          396 IYEF  399 (399)
Q Consensus       396 v~Ey  399 (399)
                      ||||
T Consensus        97 v~Ey  100 (350)
T d1q5ka_          97 VLDY  100 (350)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.8e-10  Score=102.34  Aligned_cols=87  Identities=25%  Similarity=0.372  Sum_probs=67.0

Q ss_pred             ChhhHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCcccee
Q 044262          313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLL  384 (399)
Q Consensus       313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~  384 (399)
                      +...++...++|...++||+|+||.||+|....      ++.||||.++.. .....+.+.+|...+.++ +|+|||.+.
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence            334555666788899999999999999998632      357999999754 344456788898888776 789999999


Q ss_pred             EEEEeC-CeEEEEEeC
Q 044262          385 GFSFEG-TERLLIYEF  399 (399)
Q Consensus       385 g~~~~~-~~~~lv~Ey  399 (399)
                      +++... +..++||||
T Consensus        84 ~~~~~~~~~~~iv~E~   99 (299)
T d1ywna1          84 GACTKPGGPLMVIVEF   99 (299)
T ss_dssp             EEECSTTSCCEEEEEC
T ss_pred             eeeccCCCeEEEEEEe
Confidence            998764 468999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=9.4e-10  Score=101.81  Aligned_cols=79  Identities=16%  Similarity=0.269  Sum_probs=61.0

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eE
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ER  393 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~  393 (399)
                      +++|...++||+|+||.||++.. .+|+.||||++... .....+.+++|+.+|..++||||+++++++....     ..
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            34577889999999999999986 46899999999764 3344567999999999999999999999986542     35


Q ss_pred             EEEEeC
Q 044262          394 LLIYEF  399 (399)
Q Consensus       394 ~lv~Ey  399 (399)
                      +|++|+
T Consensus        87 ~l~~~~   92 (345)
T d1pmea_          87 YLVTHL   92 (345)
T ss_dssp             EEEEEC
T ss_pred             EEEEee
Confidence            666653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1.6e-09  Score=99.83  Aligned_cols=73  Identities=23%  Similarity=0.239  Sum_probs=58.5

Q ss_pred             CCCccc-CcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhc-CCCCCccceeEEEEe----CCeEE
Q 044262          322 NNFSTD-NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFE----GTERL  394 (399)
Q Consensus       322 ~~~~~~-~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~  394 (399)
                      ++|... ++||+|+||.||++... +++.||||.++..     ..+.+|+.++.+ .+|||||++++++..    ....+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            356554 56999999999999874 5889999999643     357789988655 589999999998865    35689


Q ss_pred             EEEeC
Q 044262          395 LIYEF  399 (399)
Q Consensus       395 lv~Ey  399 (399)
                      |||||
T Consensus        86 ivmEy   90 (335)
T d2ozaa1          86 IVMEC   90 (335)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=4.4e-10  Score=102.99  Aligned_cols=78  Identities=26%  Similarity=0.309  Sum_probs=65.2

Q ss_pred             CCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCC----ChhhHHHHHHHHHHHhcCCC-CCccceeEEEEeCCe
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN----SVQGELEFKNEVLLVARLQH-RNLVRLLGFSFEGTE  392 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~----~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~  392 (399)
                      ++|...++||+|+||.||++...    .|+.||||.++..    .....+.+.+|+.+|.+++| |||+++++++.....
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            55888899999999999999852    3789999998643    11234568899999999976 899999999999999


Q ss_pred             EEEEEeC
Q 044262          393 RLLIYEF  399 (399)
Q Consensus       393 ~~lv~Ey  399 (399)
                      .++++||
T Consensus       104 ~~~v~e~  110 (322)
T d1vzoa_         104 LHLILDY  110 (322)
T ss_dssp             EEEEECC
T ss_pred             eeeeeec
Confidence            9999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.6e-09  Score=100.29  Aligned_cols=69  Identities=25%  Similarity=0.399  Sum_probs=58.5

Q ss_pred             cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE  389 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  389 (399)
                      .++|...++||+|+||.||++.. .+|+.||||+++..  +....+.+.+|+.+|..++|||||++++++..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~   88 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP   88 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            45688889999999999999986 45899999999754  33445678999999999999999999999854

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.1e-09  Score=99.47  Aligned_cols=79  Identities=28%  Similarity=0.467  Sum_probs=59.5

Q ss_pred             cCCCcccCcccccCceEEEEEEEc-C-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcC---CCCCccceeEEEEe----
Q 044262          321 TNNFSTDNKLGQGGFGAVYKGRLS-H-GQEIAVKRLSKN--SVQGELEFKNEVLLVARL---QHRNLVRLLGFSFE----  389 (399)
Q Consensus       321 ~~~~~~~~~iG~G~fG~Vykg~~~-~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~----  389 (399)
                      .++|...++||+|+||.||++... . ++.||||+++..  .......+.+|+.+|+.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            356788899999999999999863 3 567999998643  222233567787776655   89999999999863    


Q ss_pred             -CCeEEEEEeC
Q 044262          390 -GTERLLIYEF  399 (399)
Q Consensus       390 -~~~~~lv~Ey  399 (399)
                       ....++++||
T Consensus        86 ~~~~~~~~~e~   96 (305)
T d1blxa_          86 RETKLTLVFEH   96 (305)
T ss_dssp             SEEEEEEEEEC
T ss_pred             cCceEEEEEEe
Confidence             2457899986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.75  E-value=8.5e-09  Score=92.95  Aligned_cols=76  Identities=20%  Similarity=0.417  Sum_probs=64.0

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC-CCccceeEEEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH-RNLVRLLGFSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~Ey  399 (399)
                      ++|...++||+|+||.||+|... +|+.||||.+.....  ...+.+|++.+..++| +|++.+.++...+...++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            46778899999999999999975 588999999865432  2357788888988865 8999999999999999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.71  E-value=1.3e-08  Score=91.87  Aligned_cols=76  Identities=22%  Similarity=0.372  Sum_probs=60.7

Q ss_pred             CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeE-EEEeCCeEEEEEeC
Q 044262          322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLG-FSFEGTERLLIYEF  399 (399)
Q Consensus       322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g-~~~~~~~~~lv~Ey  399 (399)
                      +.|...+.||+|+||.||+|... +|+.||||.+.....  ..++..|++++..++|+|++.+++ +...++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            35778899999999999999874 588999999876432  235889999999998877666554 45677888999997

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.19  E-value=1.1e-06  Score=81.08  Aligned_cols=75  Identities=17%  Similarity=0.259  Sum_probs=57.1

Q ss_pred             CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-----------CCCccceeEEEEeC
Q 044262          323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----------HRNLVRLLGFSFEG  390 (399)
Q Consensus       323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~~  390 (399)
                      .|...++||+|+||.||+|... +|+.||||+++... ...+.+.+|+.++.+++           |+|||++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            3778899999999999999974 58999999997543 33457888998888775           57899999887543


Q ss_pred             --CeEEEEEe
Q 044262          391 --TERLLIYE  398 (399)
Q Consensus       391 --~~~~lv~E  398 (399)
                        ....++++
T Consensus        93 ~~~~~~~~~~  102 (362)
T d1q8ya_          93 GPNGVHVVMV  102 (362)
T ss_dssp             ETTEEEEEEE
T ss_pred             cccceeeeee
Confidence              34444443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.18  E-value=1.2e-06  Score=73.21  Aligned_cols=70  Identities=19%  Similarity=0.215  Sum_probs=52.4

Q ss_pred             ccCcccccCceEEEEEEEcCCcEEEEEEecCCCh------------------hhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262          326 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV------------------QGELEFKNEVLLVARLQHRNLVRLLGFS  387 (399)
Q Consensus       326 ~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~niv~l~g~~  387 (399)
                      ..++||+|+||.||+|...+|+.||||.++....                  .......+|...+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4689999999999999988899999998753210                  0112356788889999999999887553


Q ss_pred             EeCCeEEEEEeC
Q 044262          388 FEGTERLLIYEF  399 (399)
Q Consensus       388 ~~~~~~~lv~Ey  399 (399)
                        .  .+|+|||
T Consensus        84 --~--~~lvme~   91 (191)
T d1zara2          84 --G--NAVLMEL   91 (191)
T ss_dssp             --T--TEEEEEC
T ss_pred             --C--CEEEEEe
Confidence              2  3678886