Citrus Sinensis ID: 044334

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MAHYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRNSSQ
Secondary Structure (PSIPRED)
cccEEEEHHHHcccccccEEccEEEEEEEEEEEEEEccHHHHHHHHHHHHHcccccccccccEEcccEEEEEccccccccccccccHHHHHHHHccEEEccccccccccccccccccccccccHHHHHHHHHHHEEEEcccccccHHHHHHHHHcccEEEcccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHcccccccccEEEEcHHHHcccHHHHHHHccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccccccccccccccccHHHcccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccEEEcHHHHEcccccccccccEEEEEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHcccHHHcccccccccEEEEcccccccccEEEEEEccccEEEEEcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHcccccccEEEEHHHHHHccHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHcccEEEEcccccccHHHHHHccEEEEccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MAHYYASsklialgpkegwfdgdgvISAVLVVVIVSAVSNFKQSRQFQALanessdirvtgdqipadglflnghslkvdecsmtgetDRWLWLRARhfcwnehclgtrdemgnreflgtntkvdDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVyksnsestteitgsptekAILSWAVFDlgmnrnntDVAAKSLRCMAFARTKvaeaddeviegvqfrnlsaeeGVAKIENIRVTarssvpdklltvqslkpkGYVVAVtgdgtndapapkvadigpwmgiegtkwakegsdiiimddnftsvvtdqrwgrcvnnNIQKCLQFQLTVNFAALIVNIFAAVQKFRNSSQ
Flexible Loop (DISEMBL)
MAHYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKSNsestteitgspteKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGvqfrnlsaeegvakienirvtarssvpdklltvqslkpKGYVVAVTgdgtndapapkvadigpwMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRNSSQ
Low Complexity Region (SEG)
MAHYYASSKLIALGPKEGWFDGDGvisavlvvvivsavsNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDviyiiaaavtiivvaiPEGLPLALLQEAVGLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRNSSQ
Disordered region (IsUnstruct)
***YYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALA****DIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKS*************EKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQK******
Disordered Region (DISOPRED)
*AHYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQ***********RVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAA**KF*****
Disordered Region (DISEMBL)
MAHYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKSN*********SPTEKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRNSSQ
Disordered Region (DISPRO)
**HYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRN***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAHYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWNEHCLGTRDEMGNREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLALLQEAVGLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRNSSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	358	2.2.26 [Sep-21-2011]
Q9LY77	1033	Calcium-transporting ATPa	yes	no	0.307	0.106	0.651	3e-44
Q9LIK7	1017	Putative calcium-transpor	no	no	0.298	0.105	0.651	2e-41
Q9SZR1	1069	Calcium-transporting ATPa	no	no	0.416	0.139	0.593	3e-37
Q9LU41	1086	Calcium-transporting ATPa	no	no	0.293	0.096	0.630	3e-35
Q9LF79	1074	Calcium-transporting ATPa	no	no	0.304	0.101	0.597	3e-35
P38929	1173	Calcium-transporting ATPa	yes	no	0.424	0.129	0.483	1e-32
O22218	1030	Calcium-transporting ATPa	no	no	0.276	0.096	0.593	2e-32
Q9M2L4	1025	Putative calcium-transpor	no	no	0.276	0.096	0.578	1e-31
Q9HDW7	1292	Calcium-transporting ATPa	yes	no	0.310	0.085	0.522	2e-30
Q37145	1020	Calcium-transporting ATPa	no	no	0.396	0.139	0.548	2e-30

>sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1

 Score =  179 bits (454), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 88/135 (65%), Positives = 107/135 (79%)

Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           + +D V+EGVQFRN + EE + K++ IRV ARSS  DKLL V+ L+ KG+VVAVTGDGTN
Sbjct: 695 DEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTN 754

Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
           DAPA K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  +WGRCV NNIQK +QFQL
Sbjct: 755 DAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQL 814

Query: 336 TVNFAALIVNIFAAV 350
           TVN AAL++N  AA+
Sbjct: 815 TVNVAALVINFIAAI 829

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8

>sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/132 (65%), Positives = 103/132 (78%)

Query: 219 DEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAP 278
           + V+EG +FRN + EE + K+E I+V ARSS  DKLL V+ LK  G+VVAVTGDGTNDAP
Sbjct: 694 EAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAP 753

Query: 279 APKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
           A K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  +WGRCV NNIQK +QFQLTVN
Sbjct: 754 ALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVN 813

Query: 339 FAALIVNIFAAV 350
            AAL++N  AAV
Sbjct: 814 VAALVINFVAAV 825

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 104/150 (69%), Gaps = 1/150 (0%)

Query: 201 AKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSL 260
           A +L C   A    A ++  +IEG  FR+ S EE     E I V  RSS  DKLL VQSL
Sbjct: 719 AIALECGILASDSDA-SEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSL 777

Query: 261 KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWG 320
           K +G+VVAVTGDGTNDAPA   ADIG  MGI+GT+ AKE SDIII+DDNF SVV   RWG
Sbjct: 778 KRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWG 837

Query: 321 RCVNNNIQKCLQFQLTVNFAALIVNIFAAV 350
           R V  NIQK +QFQLTVN AAL++N+ AA+
Sbjct: 838 RSVYANIQKFIQFQLTVNVAALVINVVAAI 867

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2

 Score =  149 bits (377), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 93/130 (71%)

Query: 221 VIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAP 280
           +IEG  FR LS +E     + I V  RSS  DKLL VQ+L+  G VVAVTGDGTNDAPA 
Sbjct: 751 IIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPAL 810

Query: 281 KVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFA 340
             ADIG  MGI GT+ AKE SDIII+DDNF SVV   RWGR V  NIQK +QFQLTVN A
Sbjct: 811 HEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVA 870

Query: 341 ALIVNIFAAV 350
           ALI+N+ AA+
Sbjct: 871 ALIINVVAAM 880

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1

 Score =  149 bits (377), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 96/134 (71%)

Query: 217 ADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTND 276
           ++  +IEG  FR ++  E     + I V  RSS  DKLL VQSL+ +G+VVAVTGDGTND
Sbjct: 730 SEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTND 789

Query: 277 APAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLT 336
           APA   ADIG  MGI GT+ AKE SDIII+DDNF SVV   RWGR V  NIQK +QFQLT
Sbjct: 790 APALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 849

Query: 337 VNFAALIVNIFAAV 350
           VN AAL++N+ AA+
Sbjct: 850 VNVAALVINVVAAI 863

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P38929|ATC2_YEAST Calcium-transporting ATPase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PMC1 PE=1 SV=1

 Score =  140 bits (354), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/153 (48%), Positives = 105/153 (68%), Gaps = 1/153 (0%)

Query: 199 VAAKSL-RCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTV 257
           + AK++ R  A   T ++      +EG +FR L+  E +  + N+RV ARSS  DK L V
Sbjct: 767 LTAKAIARNCAILSTDISSEAYSAMEGTEFRKLTKNERIRILPNLRVLARSSPEDKRLLV 826

Query: 258 QSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQ 317
           ++LK  G VVAVTGDGTNDAPA K+AD+G  MGI GT+ A+E SDII+M D+F+++V   
Sbjct: 827 ETLKGMGDVVAVTGDGTNDAPALKLADVGFSMGISGTEVAREASDIILMTDDFSAIVNAI 886

Query: 318 RWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAV 350
           +WGRCV+ +I+K +QFQL VN  A+I+   ++V
Sbjct: 887 KWGRCVSVSIKKFIQFQLIVNITAVILTFVSSV 919

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Transports the calcium to the vacuole and participates in the control of the cytosolic free calcium.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1

 Score =  140 bits (352), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 89/128 (69%)

Query: 222 IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPK 281
           IEG +FR+LS  E  A I  I+V ARS   DK   V +L+  G VVAVTGDGTNDAPA  
Sbjct: 699 IEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTGDGTNDAPALH 758

Query: 282 VADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAA 341
            ADIG  MGI GT+ AKE +D+IIMDDNF ++V   RWGR V  NIQK +QFQLTVN  A
Sbjct: 759 EADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVA 818

Query: 342 LIVNIFAA 349
           LI+N  +A
Sbjct: 819 LIINFVSA 826

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1

 Score =  137 bits (344), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/128 (57%), Positives = 87/128 (67%)

Query: 222 IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPK 281
           IEG  FRNL   E  A +  I+V ARS   DK   V +L+  G VVAVTGDGTNDAPA  
Sbjct: 696 IEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGDGTNDAPALH 755

Query: 282 VADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAA 341
            ADIG  MGI GT+ AKE +D+IIMDDNF ++V   +WGR V  NIQK +QFQLTVN  A
Sbjct: 756 EADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVA 815

Query: 342 LIVNIFAA 349
           LI+N  +A
Sbjct: 816 LIINFVSA 823

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9HDW7|ATC2_SCHPO Calcium-transporting ATPase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmc1 PE=3 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 94/136 (69%)

Query: 222 IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPK 281
           +EG +FR+LS E+ +  +  + V ARSS  DK L ++ L+  G VVAVTGDGTNDAPA K
Sbjct: 831 MEGPEFRSLSDEKRLEILPKLDVLARSSPLDKQLLIEGLQKLGNVVAVTGDGTNDAPALK 890

Query: 282 VADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAA 341
            A++G  MG  GT+ AKE SDII+MDDNF+S+V    WGR VN+ ++K LQFQ+TVN  A
Sbjct: 891 KANVGFSMGKSGTEVAKEASDIILMDDNFSSIVKAIAWGRTVNDAVKKFLQFQITVNITA 950

Query: 342 LIVNIFAAVQKFRNSS 357
           + + I +AV     SS
Sbjct: 951 VFLTIISAVASTDQSS 966

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Transports the calcium to the vacuole and participates in the control of the cytosolic free calcium.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 96/144 (66%), Gaps = 2/144 (1%)

Query: 208 AFARTKVAEADDEV-IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK-GY 265
           A AR      DD + IEG +FR  S EE +  I  ++V ARSS  DK   V+ L+     
Sbjct: 692 AIARECGILTDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQE 751

Query: 266 VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNN 325
           VVAVTGDGTNDAPA   ADIG  MGI GT+ AKE +D+II+DDNF+++VT  +WGR V  
Sbjct: 752 VVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811

Query: 326 NIQKCLQFQLTVNFAALIVNIFAA 349
           NIQK +QFQLTVN  ALIVN  +A
Sbjct: 812 NIQKFVQFQLTVNVVALIVNFLSA 835

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
297737128	4083	unnamed protein product [Vitis vinifera]	0.932	0.081	0.418	1e-63
225451324	1057	PREDICTED: calcium-transporting ATPase 1	0.307	0.104	0.703	5e-44
255542302	1026	cation-transporting atpase plant, putati	0.293	0.102	0.707	1e-43
224130658	966	autoinhibited calcium ATPase [Populus tr	0.293	0.108	0.715	1e-43
356570602	1065	PREDICTED: calcium-transporting ATPase 1	0.296	0.099	0.702	2e-43
356527847	966	PREDICTED: putative calcium-transporting	0.377	0.139	0.698	4e-43
356504963	1053	PREDICTED: calcium-transporting ATPase 1	0.296	0.100	0.694	4e-43
16508164	1062	type IIB calcium ATPase [Medicago trunca	0.296	0.099	0.687	4e-43
224085537	927	autoinhibited calcium ATPase [Populus tr	0.301	0.116	0.676	1e-42
255542300	996	cation-transporting atpase plant, putati	0.307	0.110	0.681	1e-42

>gi|297737128|emb|CBI26329.3| unnamed protein product [Vitis vinifera]

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 183/437 (41%), Positives = 235/437 (53%), Gaps = 103/437 (23%)

Query: 14   GPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRV-------------- 59
            G KEGW+DG  +  AV++VV VSAVSNF+Q+RQF+ L+  S++I+V              
Sbjct: 1657 GLKEGWYDGGSIFVAVILVVSVSAVSNFRQNRQFEKLSKVSNNIKVDVFRNGRRQQISIF 1716

Query: 60   -----------TGDQIPADGLFLNGHSLKVDECSMTGETDR--WLWLRARHFCWNEHCLG 106
                        GDQ+PADGLFL+GHSL+VDE SMTGE+D      L+AR        +G
Sbjct: 1717 EIVVGDVVGLKIGDQVPADGLFLDGHSLQVDESSMTGESDHVEQTPLQAR-LNKLTSSIG 1775

Query: 107  TRDEMGNREFLGTNTKVDDV---IYIIAAAVTIIVVAIPEGLPLALLQ------------ 151
                      L  +  VD V   + IIAAA TI+ VAIP+GL LA+              
Sbjct: 1776 KVGMAVAFLVLVVSLAVDMVHSMVTIIAAAFTILAVAIPKGLLLAVTLILTYSMKRMMAD 1835

Query: 152  ----------EAVG-LNTICN----------------------VYKSNSESTTEI----- 173
                      E +G   TIC                       +  S+S ST  +     
Sbjct: 1836 QAMVRKLSACETMGSATTICTGKTGTLTLNQMKVTKIWLGQEPIEVSSSISTNLLNLIQQ 1895

Query: 174  --TGSPTEKAILSWAVFDLGMN----RNNTDV--------AAKSLRCMAFARTKVAEADD 219
              +GSPTEKAILSWAV +L M+    + N  +        AA SLRC+AFA T++   + 
Sbjct: 1896 GFSGSPTEKAILSWAVLELDMDMEILKQNCTILHQIIQGMAASSLRCIAFAHTQIPGEEH 1955

Query: 220  EVIEGVQFRNLSAEE----GVAKIEN-IRVTARSSVPD-KLLTVQSLKPKGYVVAVTGDG 273
            E+  GV  +NL        G+  I++  R   R +V D +   V  LK KG+VVAVTGD 
Sbjct: 1956 EI--GVGLQNLKEHSLTLIGLVGIKDPCRPGVRKAVEDCQCAGVNCLKQKGHVVAVTGDD 2013

Query: 274  TNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQF 333
            TNDAPA K A IG  MGI+GT+ AKE SDIII+DDNFTSV T  RWGRCV +NIQK +Q 
Sbjct: 2014 TNDAPALKEAHIGLSMGIQGTEVAKESSDIIILDDNFTSVATVLRWGRCVYDNIQKLIQL 2073

Query: 334  QLTVNFAALIVNIFAAV 350
            QLT+N AAL++N+ AAV
Sbjct: 2074 QLTMNVAALVINVVAAV 2090

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451324|ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera]

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 109/135 (80%)

Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           + ++ V+EGV FRN S EE + KI+ IRV ARSS  DKLL VQSLK KG+VVAVTGDGTN
Sbjct: 730 DMNNAVVEGVTFRNFSDEERMEKIDMIRVMARSSPFDKLLMVQSLKQKGHVVAVTGDGTN 789

Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
           DAPA K ADIG  MGI+GT+ AKE SDI+I+DDNFTSVVT  RWGRCV NNIQK +QFQL
Sbjct: 790 DAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLRWGRCVYNNIQKFIQFQL 849

Query: 336 TVNFAALIVNIFAAV 350
           TVN AAL++N  AAV
Sbjct: 850 TVNVAALVINFVAAV 864

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542302|ref|XP_002512214.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223548175|gb|EEF49666.1| cation-transporting atpase plant, putative [Ricinus communis]

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/130 (70%), Positives = 108/130 (83%)

Query: 221 VIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAP 280
           V+EGV+FRN S+EE +A+I++IRV ARSS  DKLL VQ LK KG+VVAVTGDGTNDAPA 
Sbjct: 700 VVEGVEFRNYSSEERMARIDDIRVMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPAL 759

Query: 281 KVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFA 340
           + ADIG  MGI+GT+ AKE SDIII+DDNFTSVVT  +WGRCV NNIQK +QFQLTVN A
Sbjct: 760 READIGLSMGIQGTEVAKESSDIIILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNIA 819

Query: 341 ALIVNIFAAV 350
           AL +N  AA+
Sbjct: 820 ALAINFVAAI 829

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130658|ref|XP_002328344.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222838059|gb|EEE76424.1| autoinhibited calcium ATPase [Populus trichocarpa]

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/130 (71%), Positives = 106/130 (81%)

Query: 221 VIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAP 280
           V+EGVQFRN S EE +A I+NI+V ARSS  DKLL VQ LK KG+VVAVTGDGTNDAPA 
Sbjct: 649 VVEGVQFRNYSPEERMAMIDNIQVMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPAL 708

Query: 281 KVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFA 340
           K ADIG  MGI+GT+ AKE SDI+I+DDNF+SVVT  RWGRCV NNIQK +QFQLTVN A
Sbjct: 709 KEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYNNIQKFIQFQLTVNVA 768

Query: 341 ALIVNIFAAV 350
           AL +N  AA+
Sbjct: 769 ALAINFVAAI 778

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570602|ref|XP_003553474.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Glycine max]

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 105/131 (80%)

Query: 220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA 279
           EV+EGV+FRN + EE + K+E IRV ARSS  DKLL VQ LK KG+VVAVTGDGTNDAPA
Sbjct: 722 EVVEGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAVTGDGTNDAPA 781

Query: 280 PKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNF 339
            K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  RWGRCV NNIQK +QFQLTVN 
Sbjct: 782 LKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNV 841

Query: 340 AALIVNIFAAV 350
           AAL++N  AAV
Sbjct: 842 AALVINFVAAV 852

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527847|ref|XP_003532518.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Glycine max]

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/136 (69%), Positives = 108/136 (79%), Gaps = 1/136 (0%)

Query: 216 EADDE-VIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGT 274
           E D+E V+EG QFRN S EE + KI+ IRV ARSS  DKLL VQ LK KG+VVAVTGDGT
Sbjct: 650 ELDEEAVVEGFQFRNFSHEERMDKIDRIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGT 709

Query: 275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQ 334
           NDAPA K ADIG  MGI+GT+ AKE SDI+I+DDNF+SVVT  RWGRCV  NIQK +QFQ
Sbjct: 710 NDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYTNIQKFIQFQ 769

Query: 335 LTVNFAALIVNIFAAV 350
           LTVN AAL++N  AAV
Sbjct: 770 LTVNVAALVINFVAAV 785

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504963|ref|XP_003521262.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Glycine max]

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/131 (69%), Positives = 105/131 (80%)

Query: 220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA 279
           EV++GV+FRN + EE + K+E IRV ARSS  DKLL VQ LK KG+VVAVTGDGTNDAPA
Sbjct: 722 EVVQGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAVTGDGTNDAPA 781

Query: 280 PKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNF 339
            K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  RWGRCV NNIQK +QFQLTVN 
Sbjct: 782 LKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNV 841

Query: 340 AALIVNIFAAV 350
           AAL++N  AAV
Sbjct: 842 AALVINFIAAV 852

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16508164|gb|AAL17950.1| type IIB calcium ATPase [Medicago truncatula]

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/131 (68%), Positives = 106/131 (80%)

Query: 220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA 279
           EV+EGV+FR+ + EE + K++NIRV ARSS  DKLL VQ L+ KG+VVAVTGDGTNDAPA
Sbjct: 732 EVVEGVEFRSYTEEERMEKVDNIRVMARSSPMDKLLMVQCLRKKGHVVAVTGDGTNDAPA 791

Query: 280 PKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNF 339
            K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  RWGRCV NNIQK +QFQLTVN 
Sbjct: 792 LKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNV 851

Query: 340 AALIVNIFAAV 350
           AAL++N  AAV
Sbjct: 852 AALVINFIAAV 862

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085537|ref|XP_002307612.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222857061|gb|EEE94608.1| autoinhibited calcium ATPase [Populus trichocarpa]

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/133 (67%), Positives = 107/133 (80%)

Query: 218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDA 277
           ++EV+EGV FRN + E+ + K++ IRV ARSS  DKLL VQ L+ KG+VVAVTGDGTNDA
Sbjct: 613 NEEVVEGVVFRNYTNEQRMEKVDKIRVMARSSPFDKLLMVQCLRQKGHVVAVTGDGTNDA 672

Query: 278 PAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTV 337
           PA K ADIG  MGI+GT+ AKE SDI+I+DDNFTSV T  RWGRCV NNIQK +QFQLTV
Sbjct: 673 PALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLRWGRCVYNNIQKFIQFQLTV 732

Query: 338 NFAALIVNIFAAV 350
           N AAL++N  AAV
Sbjct: 733 NVAALVINFIAAV 745

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542300|ref|XP_002512213.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223548174|gb|EEF49665.1| cation-transporting atpase plant, putative [Ricinus communis]

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/135 (68%), Positives = 107/135 (79%)

Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           + D  V+EGVQFRN S E+  +KI+ IRV ARSS  DKLL VQ LK KG+VV VTGDGTN
Sbjct: 683 DMDRAVVEGVQFRNFSPEDRTSKIDEIRVMARSSPFDKLLMVQCLKQKGHVVGVTGDGTN 742

Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
           DAPA K ADIG  MGI+GT+ AKE +DIII+DDNF+SVVT  +WGRCV +NIQK LQFQL
Sbjct: 743 DAPALKEADIGLAMGIQGTEVAKESADIIILDDNFSSVVTVLQWGRCVYSNIQKFLQFQL 802

Query: 336 TVNFAALIVNIFAAV 350
           TVN AAL++N  AAV
Sbjct: 803 TVNVAALVINFAAAV 817

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
TAIR|locus:2087363	1033	AT3G63380 [Arabidopsis thalian	0.377	0.130	0.651	8.5e-74
TAIR|locus:2084578	1017	AT3G22910 [Arabidopsis thalian	0.368	0.129	0.651	9.9e-74
TAIR|locus:2123924	1069	ACA10 "autoinhibited Ca(2+)-AT	0.432	0.144	0.579	2.1e-55
TAIR|locus:2094726	1086	ACA9 "autoinhibited Ca(2+)-ATP	0.432	0.142	0.560	1.8e-51
TAIR|locus:2175579	1074	ACA8 ""autoinhibited Ca2+ -ATP	0.432	0.144	0.541	4.6e-46
TAIR|locus:2082528	1025	ACA11 "autoinhibited Ca2+-ATPa	0.379	0.132	0.551	4e-44
TAIR|locus:2029794	1020	ACA1 "autoinhibited Ca2+-ATPas	0.396	0.139	0.548	3.4e-43
TAIR|locus:2059201	1015	ACA7 "auto-regulated Ca2+-ATPa	0.396	0.139	0.548	3.5e-43
TAIR|locus:2120096	1014	ACA2 "calcium ATPase 2" [Arabi	0.396	0.140	0.541	4.3e-43
ASPGD|ASPL0000059437	1432	pmcA [Emericella nidulans (tax	0.360	0.090	0.542	7.8e-41

TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)]

 Score = 442 (160.7 bits), Expect = 8.5e-74, Sum P(5) = 8.5e-74
 Identities = 88/135 (65%), Positives = 107/135 (79%)

Query:   216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
             + +D V+EGVQFRN + EE + K++ IRV ARSS  DKLL V+ L+ KG+VVAVTGDGTN
Sbjct:   695 DEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTN 754

Query:   276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
             DAPA K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  +WGRCV NNIQK +QFQL
Sbjct:   755 DAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQL 814

Query:   336 TVNFAALIVNIFAAV 350
             TVN AAL++N  AA+
Sbjct:   815 TVNVAALVINFIAAI 829

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 9.9e-74, Sum P(6) = 9.9e-74
 Identities = 86/132 (65%), Positives = 103/132 (78%)

Query:   219 DEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAP 278
             + V+EG +FRN + EE + K+E I+V ARSS  DKLL V+ LK  G+VVAVTGDGTNDAP
Sbjct:   694 EAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAP 753

Query:   279 APKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
             A K ADIG  MGI+GT+ AKE SDI+I+DDNF SV T  +WGRCV NNIQK +QFQLTVN
Sbjct:   754 ALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVN 813

Query:   339 FAALIVNIFAAV 350
              AAL++N  AAV
Sbjct:   814 VAALVINFVAAV 825

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
 Identities = 91/157 (57%), Positives = 107/157 (68%)

Query:   195 NNTDVA-AKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDK 253
             +N   A A +L C   A    A ++  +IEG  FR+ S EE     E I V  RSS  DK
Sbjct:   712 DNIQTAKAIALECGILASDSDA-SEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDK 770

Query:   254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSV 313
             LL VQSLK +G+VVAVTGDGTNDAPA   ADIG  MGI+GT+ AKE SDIII+DDNF SV
Sbjct:   771 LLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESV 830

Query:   314 VTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAV 350
             V   RWGR V  NIQK +QFQLTVN AAL++N+ AA+
Sbjct:   831 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAI 867

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0048281 "inflorescence morphogenesis" evidence=IGI

GO:0048367 "shoot system development" evidence=IGI

GO:0005516 "calmodulin binding" evidence=ISS

GO:0009506 "plasmodesma" evidence=IDA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 1.8e-51, Sum P(3) = 1.8e-51
 Identities = 88/157 (56%), Positives = 103/157 (65%)

Query:   195 NNTDVA-AKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDK 253
             +N   A A +L C   +    A  +  +IEG  FR LS +E     + I V  RSS  DK
Sbjct:   725 DNLQTAKAIALECGILSSDTEA-VEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDK 783

Query:   254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSV 313
             LL VQ+L+  G VVAVTGDGTNDAPA   ADIG  MGI GT+ AKE SDIII+DDNF SV
Sbjct:   784 LLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASV 843

Query:   314 VTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAV 350
             V   RWGR V  NIQK +QFQLTVN AALI+N+ AA+
Sbjct:   844 VKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAM 880

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007338 "single fertilization" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0010584 "pollen exine formation" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
 Identities = 85/157 (54%), Positives = 104/157 (66%)

Query:   195 NNTDVA-AKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDK 253
             +N   A A +L C     +    ++  +IEG  FR ++  E     + I V  RSS  DK
Sbjct:   708 DNVQTARAIALEC-GILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDK 766

Query:   254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSV 313
             LL VQSL+ +G+VVAVTGDGTNDAPA   ADIG  MGI GT+ AKE SDIII+DDNF SV
Sbjct:   767 LLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASV 826

Query:   314 VTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAV 350
             V   RWGR V  NIQK +QFQLTVN AAL++N+ AA+
Sbjct:   827 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAI 863

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005516 "calmodulin binding" evidence=TAS

GO:0043621 "protein self-association" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009624 "response to nematode" evidence=IEP;RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 4.0e-44, Sum P(4) = 4.0e-44
 Identities = 75/136 (55%), Positives = 89/136 (65%)

Query:   214 VAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDG 273
             +  A    IEG  FRNL   E  A +  I+V ARS   DK   V +L+  G VVAVTGDG
Sbjct:   688 ILTAGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGDG 747

Query:   274 TNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQF 333
             TNDAPA   ADIG  MGI GT+ AKE +D+IIMDDNF ++V   +WGR V  NIQK +QF
Sbjct:   748 TNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQF 807

Query:   334 QLTVNFAALIVNIFAA 349
             QLTVN  ALI+N  +A
Sbjct:   808 QLTVNVVALIINFVSA 823

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IGI

GO:0043069 "negative regulation of programmed cell death" evidence=IGI

GO:0055081 "anion homeostasis" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 3.4e-43, Sum P(4) = 3.4e-43
 Identities = 79/144 (54%), Positives = 96/144 (66%)

Query:   208 AFARTKVAEADDEV-IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGY- 265
             A AR      DD + IEG +FR  S EE +  I  ++V ARSS  DK   V+ L+     
Sbjct:   692 AIARECGILTDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQE 751

Query:   266 VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNN 325
             VVAVTGDGTNDAPA   ADIG  MGI GT+ AKE +D+II+DDNF+++VT  +WGR V  
Sbjct:   752 VVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811

Query:   326 NIQKCLQFQLTVNFAALIVNIFAA 349
             NIQK +QFQLTVN  ALIVN  +A
Sbjct:   812 NIQKFVQFQLTVNVVALIVNFLSA 835

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

GO:0009706 "chloroplast inner membrane" evidence=IDA;TAS

GO:0005262 "calcium channel activity" evidence=TAS

TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.5e-43, Sum P(4) = 3.5e-43
 Identities = 79/144 (54%), Positives = 95/144 (65%)

Query:   208 AFARTKVAEADDEV-IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK-GY 265
             A AR      DD + IEG  FR  + EE +  I  I+V ARSS  DK   V+ L+     
Sbjct:   690 AIARECGILTDDGIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDE 749

Query:   266 VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNN 325
             VVAVTGDGTNDAPA   ADIG  MGI GT+ AKE +D+II+DDNF+++VT  +WGR V  
Sbjct:   750 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYI 809

Query:   326 NIQKCLQFQLTVNFAALIVNIFAA 349
             NIQK +QFQLTVN  ALIVN  +A
Sbjct:   810 NIQKFVQFQLTVNVVALIVNFSSA 833

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 4.3e-43, Sum P(4) = 4.3e-43
 Identities = 78/144 (54%), Positives = 95/144 (65%)

Query:   208 AFARTKVAEADDEV-IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK-GY 265
             A AR      DD + IEG  FR  + EE +  I  I+V ARSS  DK   V+ L+     
Sbjct:   689 AIARECGILTDDGIAIEGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDE 748

Query:   266 VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNN 325
             VVAVTGDGTNDAPA   ADIG  MGI GT+ AKE +D+II+DDNF+++VT  +WGR V  
Sbjct:   749 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 808

Query:   326 NIQKCLQFQLTVNFAALIVNIFAA 349
             NIQK +QFQLTVN  AL+VN  +A
Sbjct:   809 NIQKFVQFQLTVNVVALVVNFSSA 832

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0006810 "transport" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006820 "anion transport" evidence=RCA

GO:0006862 "nucleotide transport" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015696 "ammonium transport" evidence=RCA

GO:0015802 "basic amino acid transport" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0043269 "regulation of ion transport" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0015085 "calcium ion transmembrane transporter activity" evidence=IDA

ASPGD|ASPL0000059437 pmcA [Emericella nidulans (taxid:162425)]

 Score = 333 (122.3 bits), Expect = 7.8e-41, Sum P(4) = 7.8e-41
 Identities = 70/129 (54%), Positives = 88/129 (68%)

Query:   222 IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPK 281
             IEG +FR LS+ +    I  ++V ARSS  DK + V  LK  G  VAVTGDGTNDA A K
Sbjct:   897 IEGPKFRKLSSRQMTQIIPRLQVLARSSPDDKKILVSQLKKLGETVAVTGDGTNDAQALK 956

Query:   282 VADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAA 341
              AD+G  MGI GT+ AKE SDII+MDDNF S+V    WGR VN+ ++K LQFQ+TVN  A
Sbjct:   957 TADVGFSMGITGTEVAKEASDIILMDDNFASIVKAMAWGRTVNDAVKKFLQFQITVNITA 1016

Query:   342 LIVNIFAAV 350
             +++   +AV
Sbjct:  1017 VLLTFISAV 1025

GO:0006874 "cellular calcium ion homeostasis" evidence=IGI;IMP

GO:0008900 "hydrogen:potassium-exchanging ATPase activity" evidence=RCA

GO:0006091 "generation of precursor metabolites and energy" evidence=RCA

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0035690 "cellular response to drug" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	358
TIGR01517	944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	4e-45
COG0474	917	COG0474, MgtA, Cation transport ATPase [Inorganic	2e-35
TIGR01522	884	TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-	6e-25
TIGR01106	997	TIGR01106, ATPase-IIC_X-K, sodium or proton efflux	1e-24
TIGR01494	543	TIGR01494, ATPase_P-type, ATPase, P-type (transpor	4e-22
TIGR01116	917	TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic	2e-18
TIGR01523	1053	TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu	2e-17
TIGR01517	944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	4e-16
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	2e-14
TIGR01525	556	TIGR01525, ATPase-IB_hvy, heavy metal translocatin	3e-14
TIGR01512	536	TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb	2e-12
TIGR01524	867	TIGR01524, ATPase-IIIB_Mg, magnesium-translocating	1e-10
PRK10517	902	PRK10517, PRK10517, magnesium-transporting ATPase	1e-09
TIGR01511	572	TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans	2e-09
PRK14010	673	PRK14010, PRK14010, potassium-transporting ATPase	3e-09
TIGR01497	675	TIGR01497, kdpB, K+-transporting ATPase, B subunit	5e-08
COG2216	681	COG2216, KdpB, High-affinity K+ transport system,	6e-08
PRK01122	679	PRK01122, PRK01122, potassium-transporting ATPase	2e-07
TIGR01647	754	TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e	9e-07
pfam00122	222	pfam00122, E1-E2_ATPase, E1-E2 ATPase	1e-06
PRK15122	903	PRK15122, PRK15122, magnesium-transporting ATPase;	2e-06
COG0474	917	COG0474, MgtA, Cation transport ATPase [Inorganic	4e-06
TIGR01657	1054	TIGR01657, P-ATPase-V, P-type ATPase of unknown pu	7e-05
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	9e-05
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	5e-04
TIGR01494	543	TIGR01494, ATPase_P-type, ATPase, P-type (transpor	0.001
COG4087	152	COG4087, COG4087, Soluble P-type ATPase [General f	0.002

>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase

 Score =  164 bits (418), Expect = 4e-45
 Identities = 73/129 (56%), Positives = 90/129 (69%)

Query: 222 IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPK 281
           +EG +FR+L  EE    +  +RV ARSS  DK L V  LK  G VVAVTGDGTNDAPA K
Sbjct: 629 MEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALK 688

Query: 282 VADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAA 341
           +AD+G  MGI GT+ AKE SDII++DDNF S+V   +WGR V +NI+K LQFQLTVN  A
Sbjct: 689 LADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVA 748

Query: 342 LIVNIFAAV 350
           +I+    + 
Sbjct: 749 VILTFVGSC 757

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944

>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score =  136 bits (345), Expect = 2e-35
 Identities = 55/136 (40%), Positives = 80/136 (58%)

Query: 215 AEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGT 274
                 VI+G +   LS EE    +E + V AR S   K   V++L+  G+VVA+TGDG 
Sbjct: 589 EAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGV 648

Query: 275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQ 334
           NDAPA K AD+G  MG EGT  AKE +DI+++DDNF ++V     GR V  NI+K + + 
Sbjct: 649 NDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYL 708

Query: 335 LTVNFAALIVNIFAAV 350
           L+ N   ++  +  ++
Sbjct: 709 LSKNVGEVLTLLIYSL 724

Length = 917

>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase

 Score =  106 bits (265), Expect = 6e-25
 Identities = 51/133 (38%), Positives = 81/133 (60%)

Query: 223 EGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKV 282
            G +   +  ++    +  + V AR+S   K+  V++L+ +G VVA+TGDG NDAPA K+
Sbjct: 576 SGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKL 635

Query: 283 ADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAAL 342
           ADIG  MG  GT  AKE +D+I+ DD+F ++++    G+ + NNI+  + FQL+ + AAL
Sbjct: 636 ADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAAL 695

Query: 343 IVNIFAAVQKFRN 355
            +   A +  F N
Sbjct: 696 SLIALATLMGFPN 708

This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884

>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

 Score =  104 bits (262), Expect = 1e-24
 Identities = 49/129 (37%), Positives = 81/129 (62%), Gaps = 2/129 (1%)

Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIR--VTARSSVPDKLLTVQSLKPKGYVVAVTGDG 273
           +A   V+ G   +++++E+    ++     V AR+S   KL+ V+  + +G +VAVTGDG
Sbjct: 633 DAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDG 692

Query: 274 TNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQF 333
            ND+PA K ADIG  MGI G+  +K+ +D+I++DDNF S+VT    GR + +N++K + +
Sbjct: 693 VNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 752

Query: 334 QLTVNFAAL 342
            LT N   +
Sbjct: 753 TLTSNIPEI 761

This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997

>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC

 Score = 97.0 bits (242), Expect = 4e-22
 Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)

Query: 229 NLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPW 288
           N+   + +AK   I V AR S   KL  V++L+ KG++VA+TGDG NDAPA K AD+G  
Sbjct: 415 NVLTAKAIAKELGIDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIA 474

Query: 289 MGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFA 348
           MG      AK  +DI+++DD+ +++V   + GR + +NI+  + + +  N   + + +  
Sbjct: 475 MG------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLL 528

Query: 349 AV 350
            V
Sbjct: 529 IV 530

The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543

>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase

 Score = 86.4 bits (214), Expect = 2e-18
 Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 2/126 (1%)

Query: 224 GVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVA 283
           G +F  +   +  A   +  + +R     K   V+ L+ +G +VA+TGDG NDAPA K A
Sbjct: 590 GREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKA 649

Query: 284 DIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALI 343
           DIG  MG  GT+ AKE SD+++ DDNF ++V     GR + NN+++ +++ ++ N    +
Sbjct: 650 DIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE-V 707

Query: 344 VNIFAA 349
           V IF  
Sbjct: 708 VCIFLT 713

This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917

>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type

 Score = 83.5 bits (206), Expect = 2e-17
 Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 10/142 (7%)

Query: 218 DDEVIEGVQFRNLSAEEGVAKIENIR----VTARSSVPDKLLTVQSLKPKGYVVAVTGDG 273
           D  V+ G QF  LS EE    +++++    V AR +   K+  +++L  +    A+TGDG
Sbjct: 699 DSMVMTGSQFDALSDEE----VDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754

Query: 274 TNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQF 333
            ND+P+ K+A++G  MGI G+  AK+ SDI++ DDNF S++     GR + +NI K +  
Sbjct: 755 VNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLH 814

Query: 334 QLTVNFAALIVNIFAAVQKFRN 355
            L  N A  I+ I      FR+
Sbjct: 815 LLAENVAEAILLIIGLA--FRD 834

Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053

>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase

 Score = 79.4 bits (196), Expect = 4e-16
 Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 25/100 (25%)

Query: 14  GPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRV-------------- 59
             + GW +G  ++ +V++VV+V+AV+++K+  QF+ L  E S  ++              
Sbjct: 124 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIH 183

Query: 60  -----------TGDQIPADGLFLNGHSLKVDECSMTGETD 88
                      TGD +PADG+F++G SL++DE S+TGE+D
Sbjct: 184 DIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESD 223

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 74.6 bits (184), Expect = 2e-14
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DK   V+ L+ +G  VA+ GDG NDAPA   AD+G  MG  GT  A E +D+++M D+ +
Sbjct: 587 DKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLS 645

Query: 312 SVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIF 347
           +V       R     I++ L +    N  A+ +   
Sbjct: 646 AVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAG 681

Length = 713

>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase

 Score = 73.4 bits (181), Expect = 3e-14
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DKL  V+ L+ +G VVA+ GDG NDAPA   AD+G  MG  G+  A E +DI++++D+ +
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLS 493

Query: 312 SVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFA 348
           S+ T     R     I++ L + L  N  A+ +    
Sbjct: 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530

This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556

>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DKL  V+ L+ K   VA+ GDG NDAPA   AD+G  MG  G+  A E +D+++++D+ +
Sbjct: 413 DKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLS 472

Query: 312 SVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIF 347
            +    R  R     +++ +   L +    +++ +F
Sbjct: 473 RLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508

This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536

>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase

 Score = 62.6 bits (152), Expect = 1e-10
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 7/130 (5%)

Query: 220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA 279
           + + G     LS EE   ++    + AR +   K   +  LK  G+ V   GDG NDAPA
Sbjct: 558 DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPA 617

Query: 280 PKVADIGPWMGIEGT-KWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
            + AD+G  + ++     AKE SDII+++ +   +      GR    NI K L+   + N
Sbjct: 618 LRKADVG--ISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSN 675

Query: 339 FAALIVNIFA 348
           F     N+F+
Sbjct: 676 F----GNVFS 681

This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867

>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 10/110 (9%)

Query: 199 VAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQ 258
           VAAK          +V     EV+ G     LS +E     E   + AR +   K   V 
Sbjct: 579 VAAKVCH-------EVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVT 631

Query: 259 SLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEG-TKWAKEGSDIIIMD 307
            LK +G+VV   GDG NDAPA + ADIG  + ++G    A+E +DII+++
Sbjct: 632 LLKREGHVVGFMGDGINDAPALRAADIG--ISVDGAVDIAREAADIILLE 679

Length = 902

>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase

 Score = 58.8 bits (143), Expect = 2e-09
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 229 NLSAEEGVAK---IENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI 285
           N    + VAK   IEN+R  A     DK   ++ L+ KG VVA+ GDG NDAPA   AD+
Sbjct: 440 NRKTAKAVAKELGIENVR--AEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADV 497

Query: 286 GPWMGIEGTKWAKEGSDIIIMDDNFTSVVT 315
           G  +G  GT  A E +D++++ ++   V T
Sbjct: 498 GIAIG-AGTDVAIEAADVVLLRNDLNDVAT 526

This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572

>gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional

 Score = 58.2 bits (140), Expect = 3e-09
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 243 RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD 302
           R  A     DK+  ++  + KG++VA+TGDGTNDAPA   A++G  M   GT  AKE ++
Sbjct: 482 RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAAN 540

Query: 303 IIIMDDNFTSVVTDQRWGR 321
           +I +D N T ++     G+
Sbjct: 541 LIDLDSNPTKLMEVVLIGK 559

Length = 673

>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit

 Score = 54.1 bits (130), Expect = 5e-08
 Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 246 ARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIII 305
           A ++  DK+  ++  + +G +VA+TGDGTNDAPA   AD+G  M   GT+ AKE ++++ 
Sbjct: 490 AEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVD 548

Query: 306 MDDNFTSVV 314
           +D + T ++
Sbjct: 549 LDSDPTKLI 557

This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675

>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

 Score = 53.8 bits (130), Expect = 6e-08
 Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DKL  ++  + +G +VA+TGDGTNDAPA   AD+G  M   GT+ AKE ++++ +D N T
Sbjct: 497 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPT 555

Query: 312 SVV 314
            ++
Sbjct: 556 KLI 558

Length = 681

>gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional

 Score = 52.5 bits (127), Expect = 2e-07
 Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DKL  ++  + +G +VA+TGDGTNDAPA   AD+G  M   GT+ AKE  +++ +D N T
Sbjct: 495 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPT 553

Length = 679

>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase

 Score = 50.4 bits (121), Expect = 9e-07
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 253 KLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEG-TKWAKEGSDIIIMDDNFT 311
           K   V+ L+ +G++V +TGDG NDAPA K AD+G  + + G T  A+  +DI++ +   +
Sbjct: 522 KYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG--IAVAGATDAARSAADIVLTEPGLS 579

Query: 312 SVVT 315
            +V 
Sbjct: 580 VIVD 583

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754

>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 26/89 (29%)

Query: 25 VISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVT------------------------ 60
          ++  VL+  ++ A   ++  +  +AL         T                        
Sbjct: 2  ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61

Query: 61 -GDQIPADGLFLNGHSLKVDECSMTGETD 88
           GD++PADG  + G SL+VDE ++TGE+ 
Sbjct: 62 PGDRVPADGRIIEG-SLEVDESALTGESL 89

Length = 222

>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 19/135 (14%)

Query: 220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA 279
           E + G +   +       ++E   V A+ +   K   +++L+  G+ V   GDG NDAPA
Sbjct: 593 EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652

Query: 280 PKVADIGPWMGIE---GTKWAKEGSDIIIMDDNFT----SVVTDQRWGRCVNNNIQKCLQ 332
            + AD+    GI    G   AKE +DII+++ +       V+     GR    NI K L 
Sbjct: 653 LRDADV----GISVDSGADIAKESADIILLEKSLMVLEEGVIK----GRETFGNIIKYLN 704

Query: 333 FQLTVNFAALIVNIF 347
              + NF     N+F
Sbjct: 705 MTASSNFG----NVF 715

Length = 903

>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 48.5 bits (116), Expect = 4e-06
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 24/92 (26%)

Query: 21  DGDGVISAVLVVVIVSAVSNFKQSRQFQALANE-----------------SSDIRV---- 59
           D   ++  V++  ++  V  ++  +  +AL                    +S++      
Sbjct: 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIV 164

Query: 60  ---TGDQIPADGLFLNGHSLKVDECSMTGETD 88
               GD +PAD   L    L+VDE ++TGE+ 
Sbjct: 165 LLEAGDVVPADLRLLESSDLEVDESALTGESL 196

Length = 917

>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V)

 Score = 44.7 bits (106), Expect = 7e-05
 Identities = 18/48 (37%), Positives = 25/48 (52%)

Query: 239 IENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG 286
           + +  V AR +   K   V+ L+   Y V + GDG ND  A K AD+G
Sbjct: 776 LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVG 823

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 44.0 bits (104), Expect = 9e-05
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 251 PD-KLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDN 309
           PD K   ++ L+ +G  VA+ GDG NDAPA   AD+G  MG  G+  A E + I +M  +
Sbjct: 698 PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHS 756

Query: 310 FTSVV 314
              V 
Sbjct: 757 LMGVA 761

Length = 834

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DK+  V  L      +A+ GDG NDAPA K A IG  MG  GT  A E +D  +  +   
Sbjct: 617 DKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLR 674

Query: 312 SVVTDQRWGRCVNNNI 327
            +       R  + NI
Sbjct: 675 GLAQMIELSRATHANI 690

Length = 741

>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 33/140 (23%)

Query: 26  ISAVLVVVIVSAVSNFKQSRQFQALAN------------------ESSDIRV-------T 60
           +  VLV V++      K     ++L++                   + D+         +
Sbjct: 3   LFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKEIPAKDLVPGDVVLVKS 62

Query: 61  GDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCW------NEHCLGTRDEMGNR 114
           G+ +PADG+ L+G S  VDE ++TGE++  +   A           +    GT    G  
Sbjct: 63  GETVPADGVLLSG-SCFVDESNLTGESN-PVLKTALKETQSGTITGDLVFAGTYVFGGTL 120

Query: 115 EFLGTNTKVDDVIYIIAAAV 134
             + T T +   +  IA  V
Sbjct: 121 IVVVTPTGILTTVGRIAVVV 140

The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543

>gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only]

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 237 AKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPW-MGIEGTK 295
             I   RV A +    K   ++ LK +   V + G+G ND  A + AD+G   +  EG  
Sbjct: 66  VGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVP 125

Query: 296 W-AKEGSDIIIMD 307
                 +D+++ +
Sbjct: 126 ERLLLTADVVLKE 138

Length = 152

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	358
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	100.0
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	100.0
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	100.0
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	100.0
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	100.0
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	100.0
PRK15122	903	magnesium-transporting ATPase; Provisional	100.0
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	100.0
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	100.0
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	100.0
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	100.0
PRK14010	673	potassium-transporting ATPase subunit B; Provision	100.0
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	100.0
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	100.0
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	100.0
PRK01122	679	potassium-transporting ATPase subunit B; Provision	100.0
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	100.0
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	100.0
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	100.0
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	100.0
PRK10671	834	copA copper exporting ATPase; Provisional	100.0
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	100.0
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	100.0
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	100.0
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	100.0
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	100.0
KOG0208	1140	consensus Cation transport ATPase [Inorganic ion t	100.0
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	100.0
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	100.0
PLN03190	1178	aminophospholipid translocase; Provisional	100.0
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	100.0
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	99.94
KOG0206	1151	consensus P-type ATPase [General function predicti	99.89
PF00122	230	E1-E2_ATPase: E1-E2 ATPase p-type cation-transport	99.75
COG4087	152	Soluble P-type ATPase [General function prediction	99.33
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.06
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.41
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.31
PRK10513	270	sugar phosphate phosphatase; Provisional	98.22
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.1
PRK10976	266	putative hydrolase; Provisional	98.08
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.06
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.05
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.02
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.02
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.01
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.99
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.98
PLN02887	580	hydrolase family protein	97.97
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.75
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	97.65
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.65
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.62
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.51
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.45
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.43
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.38
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.31
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	96.93
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	96.77
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	96.71
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	96.34
PLN02382	413	probable sucrose-phosphatase	96.33
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	96.14
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	95.9
PLN02954	224	phosphoserine phosphatase	95.72
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	95.39
COG0546	220	Gph Predicted phosphatases [General function predi	95.24
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.09
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	95.02
PF13246	91	Hydrolase_like2: Putative hydrolase of sodium-pota	94.99
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	94.91
PRK13222	226	phosphoglycolate phosphatase; Provisional	94.87
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	94.73
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	94.64
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	94.57
PTZ00174	247	phosphomannomutase; Provisional	94.55
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	93.85
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	93.4
KOG4383	1354	consensus Uncharacterized conserved protein [Funct	93.39
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	93.11
PRK13288	214	pyrophosphatase PpaX; Provisional	92.31
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	92.28
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	91.85
PRK08238	479	hypothetical protein; Validated	91.65
COG4030	315	Uncharacterized protein conserved in archaea [Func	91.58
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	90.25
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	89.66
PRK13223	272	phosphoglycolate phosphatase; Provisional	89.22
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	88.77
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	87.6
PLN02580	384	trehalose-phosphatase	86.99
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	86.73
COG4359	220	Uncharacterized conserved protein [Function unknow	86.19
PRK13225	273	phosphoglycolate phosphatase; Provisional	82.77
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	80.24

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.6e-65  Score=519.50  Aligned_cols=333  Identities=24%  Similarity=0.266  Sum_probs=281.7

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCce-e------------------------CCCccCCCEEEE
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIR-V------------------------TGDQIPADGLFL   71 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~-V------------------------~G~~IPaDg~vl   71 (358)
                      ..|.+++.++++++++.+++.+...|+++.+++|.++.|+.. +                        |||+||+||+|+
T Consensus       172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~  251 (713)
T COG2217         172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV  251 (713)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence            344557778888889999999999999999999998875432 2                        999999999999


Q ss_pred             eeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch----------------------------
Q 044334           72 NGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG----------------------------  112 (358)
Q Consensus        72 ~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g----------------------------  112 (358)
                      +| +..||||+|||||+||.|.+||.+++|           |+++|.+|+++                            
T Consensus       252 ~G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fv  330 (713)
T COG2217         252 SG-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV  330 (713)
T ss_pred             eC-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccH
Confidence            99 689999999999999999999999998           99999999999                            


Q ss_pred             -------hHHhhhccccc-chHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhh
Q 044334          113 -------NREFLGTNTKV-DDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGL  156 (358)
Q Consensus       113 -------~~~~~~~~~~~-~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l  156 (358)
                             ...|..|++.+ .+|..++..++++++++|||||++++                            .++++.|
T Consensus       331 p~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvF  410 (713)
T COG2217         331 PVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVF  410 (713)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEE
Confidence                   11222232322 57888999999999999999999999                            4678999


Q ss_pred             CceeeEeecCCCCce-------------------eEcCCccHHHHHHHHHHhcCC-CCCc--------------------
Q 044334          157 NTICNVYKSNSESTT-------------------EITGSPTEKAILSWAVFDLGM-NRNN--------------------  196 (358)
Q Consensus       157 ~~t~t~~~~~~~~~~-------------------~~~g~~~e~all~~a~~~~~~-~~~~--------------------  196 (358)
                      |||||+|+++..-..                   ....||...|+++.++ ..+. +.+.                    
T Consensus       411 DKTGTLT~G~p~v~~v~~~~~~e~~~L~laAalE~~S~HPiA~AIv~~a~-~~~~~~~~~~~~i~G~Gv~~~v~g~~v~v  489 (713)
T COG2217         411 DKTGTLTEGKPEVTDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAA-ERGLPDVEDFEEIPGRGVEAEVDGERVLV  489 (713)
T ss_pred             eCCCCCcCCceEEEEEecCCCCHHHHHHHHHHHHhcCCChHHHHHHHHHH-hcCCCCccceeeeccCcEEEEECCEEEEE
Confidence            999999997431100                   1123566666666665 3331 1111                    


Q ss_pred             --------------------hHHHhccCceEEEEeecccc-----------------------C-Cceeeecccccccch
Q 044334          197 --------------------TDVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNLSA  232 (358)
Q Consensus       197 --------------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~~~  232 (358)
                                          +.+.++|.+++.++.++...                       + +..|+|||+.+  .+
T Consensus       490 G~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~--~A  567 (713)
T COG2217         490 GNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRR--TA  567 (713)
T ss_pred             cCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHH--HH
Confidence                                33456788888888776332                       3 78999999977  78


Q ss_pred             hhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcch
Q 044334          233 EEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS  312 (358)
Q Consensus       233 ~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~  312 (358)
                      +++++.+++++++++++||||.++|+.||++|++|+|||||+||+|||++|||||+|| .|+|+|+++||++++++|+..
T Consensus       568 ~~iA~~lGId~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~  646 (713)
T COG2217         568 EAIAKELGIDEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSA  646 (713)
T ss_pred             HHHHHHcChHhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHH
Confidence            8999999999999999999999999999999999999999999999999999999999 799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          313 VVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       313 i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      ++++++++|+++++||||+.|++.||+++++++++|+++||-
T Consensus       647 v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~  688 (713)
T COG2217         647 VPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWI  688 (713)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence            999999999999999999999999999999999999998863

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.3e-66  Score=509.65  Aligned_cols=349  Identities=43%  Similarity=0.653  Sum_probs=305.9

Q ss_pred             CcccccccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcee----------------------
Q 044334            2 AHYYASSKLIALGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRV----------------------   59 (358)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~V----------------------   59 (358)
                      |..++-.|+.+++...+|+|+++|++.+++++++.+.++|++++++++|.+..+++++                      
T Consensus       165 AvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv  244 (1034)
T KOG0204|consen  165 AVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIV  244 (1034)
T ss_pred             HHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEE
Confidence            4556677888999999999999999999999999999999999999999977655544                      


Q ss_pred             ---CCCccCCCEEEEeeCceEEecCCCcCCCcceeeec-CCceEEE------------Eeeecccccch-----------
Q 044334           60 ---TGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLR-ARHFCWN------------EHCLGTRDEMG-----------  112 (358)
Q Consensus        60 ---~G~~IPaDg~vl~g~~~~vDes~lTGEs~Pv~k~~-~~~~~~~------------V~~~G~~T~~g-----------  112 (358)
                         -||.|||||++++|+++.+|||+|||||.||.|.+ .|||+.+            |+++|.+|+.|           
T Consensus       245 ~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~  324 (1034)
T KOG0204|consen  245 QLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGE  324 (1034)
T ss_pred             EeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCC
Confidence               89999999999999999999999999999999997 7998887            99999999999           


Q ss_pred             -------------------------------hHHh-hhcccc------------cchHHHHHHHHHHHHHhhcCCchhHH
Q 044334          113 -------------------------------NREF-LGTNTK------------VDDVIYIIAAAVTIIVVAIPEGLPLA  148 (358)
Q Consensus       113 -------------------------------~~~~-~~~~~~------------~~~~~~~~~~~~~~lv~a~P~~L~la  148 (358)
                                                     +.+| ......            ...+...|..+++++++|+|+|||+|
T Consensus       325 e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLA  404 (1034)
T KOG0204|consen  325 EETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLA  404 (1034)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHH
Confidence                                           1111 111000            13567888999999999999999999


Q ss_pred             H----------------H------------HHHHhhCceeeEeecC----------------------------------
Q 044334          149 L----------------L------------QEAVGLNTICNVYKSN----------------------------------  166 (358)
Q Consensus       149 ~----------------~------------~~~~~l~~t~t~~~~~----------------------------------  166 (358)
                      +                +            ..++|.|||||+|.++                                  
T Consensus       405 VTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~g  484 (1034)
T KOG0204|consen  405 VTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQG  484 (1034)
T ss_pred             HHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHH
Confidence            9                2            2457888888888751                                  


Q ss_pred             -------------CC-CceeEcCCccHHHHHHHHHHhcCCCCCc------------------------------------
Q 044334          167 -------------SE-STTEITGSPTEKAILSWAVFDLGMNRNN------------------------------------  196 (358)
Q Consensus       167 -------------~~-~~~~~~g~~~e~all~~a~~~~~~~~~~------------------------------------  196 (358)
                                   .+ ..+...|+|||+||+.|.. ++|.++..                                    
T Consensus       485 I~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~K  563 (1034)
T KOG0204|consen  485 IAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWK  563 (1034)
T ss_pred             HhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEc
Confidence                         11 1566789999999999999 89988654                                    


Q ss_pred             -----------------------------------hHHHhccCceEEEEeecccc-------------------------
Q 044334          197 -----------------------------------TDVAAKSLRCMAFARTKVAE-------------------------  216 (358)
Q Consensus       197 -----------------------------------~~~a~~G~rvl~~a~~~~~~-------------------------  216 (358)
                                                         +.|+++|+|++++||++...                         
T Consensus       564 GAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivG  643 (1034)
T KOG0204|consen  564 GASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVG  643 (1034)
T ss_pred             ChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEee
Confidence                                               88999999999999987321                         


Q ss_pred             -----------------------------------------------CCceeeecccccccchhhhhhccccceeeecCC
Q 044334          217 -----------------------------------------------ADDEVIEGVQFRNLSAEEGVAKIENIRVTARSS  249 (358)
Q Consensus       217 -----------------------------------------------~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~  249 (358)
                                                                     ++..+++|.+++++++++..+.+++.+|+||.+
T Consensus       644 IkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSS  723 (1034)
T KOG0204|consen  644 IKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSS  723 (1034)
T ss_pred             ccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCC
Confidence                                                           144777777788889999999999999999999


Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQK  329 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~  329 (358)
                      |.||+-+|+.|+++|++|+.+|||.||+|||++||||+|||..|+++|||+|||||+||||++|+.+++|||+.|.+|+|
T Consensus       724 P~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqK  803 (1034)
T KOG0204|consen  724 PNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQK  803 (1034)
T ss_pred             CchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Q 044334          330 CLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       330 ~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      +++|+++.|++++.+++.+.+.
T Consensus       804 FiQFQLTVNVvAliv~fv~A~~  825 (1034)
T KOG0204|consen  804 FLQFQLTVNVVALIVNFVSACA  825 (1034)
T ss_pred             hheeEEEEEEEeehhhhhhhhh
Confidence            9999999999999999988765

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=100.00  E-value=9.3e-60  Score=489.59  Aligned_cols=330  Identities=21%  Similarity=0.270  Sum_probs=275.0

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEe
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLN   72 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~   72 (358)
                      ++|.|+++++++++++..+++++++++++.+++|+++. ++++|                       +||+|||||+|++
T Consensus        53 ~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~  132 (755)
T TIGR01647        53 ENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE  132 (755)
T ss_pred             cchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe
Confidence            47999999999999999999999999999999998875 55555                       9999999999999


Q ss_pred             eCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch-----------------------------
Q 044334           73 GHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-----------------------------  112 (358)
Q Consensus        73 g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-----------------------------  112 (358)
                      |+.+.||||+|||||.||.|.+|+.+++|           |++||.+|.+|                             
T Consensus       133 g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~  212 (755)
T TIGR01647       133 GDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIV  212 (755)
T ss_pred             cCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHH
Confidence            95599999999999999999998887776           99999999999                             


Q ss_pred             ------hHHhhhccc-ccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhC
Q 044334          113 ------NREFLGTNT-KVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLN  157 (358)
Q Consensus       113 ------~~~~~~~~~-~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~  157 (358)
                            ...|..++. .+.++..++.+++++++++|||+||+++                            -++.+|+|
T Consensus       213 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~D  292 (755)
T TIGR01647       213 LIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSD  292 (755)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEec
Confidence                  011111222 3457888999999999999999999999                            46778999


Q ss_pred             ceeeEeecCCC--------C---c-----------eeEcCCccHHHHHHHHHHhcC-------------CCCCc------
Q 044334          158 TICNVYKSNSE--------S---T-----------TEITGSPTEKAILSWAVFDLG-------------MNRNN------  196 (358)
Q Consensus       158 ~t~t~~~~~~~--------~---~-----------~~~~g~~~e~all~~a~~~~~-------------~~~~~------  196 (358)
                      ||||+|+++..        +   .           ....+||+|.|+++++. +.+             .+...      
T Consensus       293 KTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~-~~~~~~~~~~~~~~~pf~~~~k~~~~~  371 (755)
T TIGR01647       293 KTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAK-DLKEARDGYKVLEFVPFDPVDKRTEAT  371 (755)
T ss_pred             CCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHH-HhHHHHhcCceEEEeccCCCCCeEEEE
Confidence            99999987410        0   0           12346899999999876 322             00000      


Q ss_pred             --------------------------------------hHHHhccCceEEEEeecccc----------------------
Q 044334          197 --------------------------------------TDVAAKSLRCMAFARTKVAE----------------------  216 (358)
Q Consensus       197 --------------------------------------~~~a~~G~rvl~~a~~~~~~----------------------  216 (358)
                                                            ++++++|+|++++|+++.+.                      
T Consensus       372 v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI  451 (755)
T TIGR01647       372 VEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETI  451 (755)
T ss_pred             EEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHH
Confidence                                                  34567899999999964211                      


Q ss_pred             ------C-Cceeeecccccccchhhhhhccccc------------------------------eeeecCChhhHHHHHHh
Q 044334          217 ------A-DDEVIEGVQFRNLSAEEGVAKIENI------------------------------RVTARSSVPDKLLTVQS  259 (358)
Q Consensus       217 ------~-~~~~ltGd~~~~~~~~~~~~~~~~~------------------------------~v~a~~~P~~K~~iv~~  259 (358)
                            + +..|+|||+..  ++.++++.++..                              .+|||++|+||.++|+.
T Consensus       452 ~~l~~aGI~v~miTGD~~~--tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~  529 (755)
T TIGR01647       452 ERARHLGVEVKMVTGDHLA--IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEI  529 (755)
T ss_pred             HHHHHCCCeEEEECCCCHH--HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHH
Confidence                  3 77999999965  455566655543                              39999999999999999


Q ss_pred             hcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          260 LKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNF  339 (358)
Q Consensus       260 l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~  339 (358)
                      ||++|++|+|+|||+||+|||++|||||||| +|+++||++||+++++|+|+.|++++++||++++|+++|+.|.++.|+
T Consensus       530 lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~  608 (755)
T TIGR01647       530 LQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETI  608 (755)
T ss_pred             HHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence            9999999999999999999999999999999 899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 044334          340 AALIVNIFAAV  350 (358)
Q Consensus       340 ~~~~~~~~g~~  350 (358)
                      ..+++.+++.+
T Consensus       609 ~~~~~~~~~~l  619 (755)
T TIGR01647       609 RIVFFFGLLIL  619 (755)
T ss_pred             HHHHHHHHHHH
Confidence            87765555543

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.7e-60  Score=468.57  Aligned_cols=337  Identities=30%  Similarity=0.456  Sum_probs=282.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEee
Q 044334           18 GWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLNG   73 (358)
Q Consensus        18 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~g   73 (358)
                      .|-|+++|.+++++++.++++||||++|++++|+++. +.+.|                       -||+||||-++++-
T Consensus        77 ~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~  156 (972)
T KOG0202|consen   77 DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA  156 (972)
T ss_pred             hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence            5668899999999999999999999999999999998 56666                       78899999999998


Q ss_pred             CceEEecCCCcCCCcceeeecC-------------CceEEE------------Eeeecccccch----------------
Q 044334           74 HSLKVDECSMTGETDRWLWLRA-------------RHFCWN------------EHCLGTRDEMG----------------  112 (358)
Q Consensus        74 ~~~~vDes~lTGEs~Pv~k~~~-------------~~~~~~------------V~~~G~~T~~g----------------  112 (358)
                      .++.+|||+|||||.||.|...             .++.|+            |+.||.+|.+|                
T Consensus       157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL  236 (972)
T KOG0202|consen  157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL  236 (972)
T ss_pred             eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence            8899999999999999999621             124443            99999999999                


Q ss_pred             -------------------hHHhhh--cccc-----c---chHHHHHHHHHHHHHhhcCCchhHHH--------------
Q 044334          113 -------------------NREFLG--TNTK-----V---DDVIYIIAAAVTIIVVAIPEGLPLAL--------------  149 (358)
Q Consensus       113 -------------------~~~~~~--~~~~-----~---~~~~~~~~~~~~~lv~a~P~~L~la~--------------  149 (358)
                                         +..|..  .++.     +   ..+...|..++++.+.|+|+|||..+              
T Consensus       237 qk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakk  316 (972)
T KOG0202|consen  237 QKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKK  316 (972)
T ss_pred             HHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhh
Confidence                               001110  1111     2   46788999999999999999999888              


Q ss_pred             --------------HHHHHhhCceeeEeec--------------------------------------------------
Q 044334          150 --------------LQEAVGLNTICNVYKS--------------------------------------------------  165 (358)
Q Consensus       150 --------------~~~~~~l~~t~t~~~~--------------------------------------------------  165 (358)
                                    -...+|.|||||+|.+                                                  
T Consensus       317 naIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l  396 (972)
T KOG0202|consen  317 NAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLL  396 (972)
T ss_pred             hhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHH
Confidence                          1223445555555543                                                  


Q ss_pred             ------------------CCCCceeEcCCccHHHHHHHHHHhcCCCCCc-------------------------------
Q 044334          166 ------------------NSESTTEITGSPTEKAILSWAVFDLGMNRNN-------------------------------  196 (358)
Q Consensus       166 ------------------~~~~~~~~~g~~~e~all~~a~~~~~~~~~~-------------------------------  196 (358)
                                        +. +.|+..|.|+|.||..+++ +.+.....                               
T Consensus       397 ~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd  474 (972)
T KOG0202|consen  397 QELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD  474 (972)
T ss_pred             HHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence                              32 3455689999999999999 87754310                               


Q ss_pred             ----------------------------------------------------------hHHHhccCceEEEEeecccc--
Q 044334          197 ----------------------------------------------------------TDVAAKSLRCMAFARTKVAE--  216 (358)
Q Consensus       197 ----------------------------------------------------------~~~a~~G~rvl~~a~~~~~~--  216 (358)
                                                                                .++.++|+|+|++|+++.+.  
T Consensus       475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~  554 (972)
T KOG0202|consen  475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV  554 (972)
T ss_pred             cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence                                                                      67899999999999997661  


Q ss_pred             ---------------------------------------------C------------------------------Ccee
Q 044334          217 ---------------------------------------------A------------------------------DDEV  221 (358)
Q Consensus       217 ---------------------------------------------~------------------------------~~~~  221 (358)
                                                                   +                              ....
T Consensus       555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~  634 (972)
T KOG0202|consen  555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA  634 (972)
T ss_pred             hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence                                                         1                              2355


Q ss_pred             eecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcC
Q 044334          222 IEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGS  301 (358)
Q Consensus       222 ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~a  301 (358)
                      +||++++.++.+++........+|+|++|++|.+||++||+.|+.|+|+|||+||+||||.||+|||||.+|+++||++|
T Consensus       635 ~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs  714 (972)
T KOG0202|consen  635 LTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS  714 (972)
T ss_pred             cchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence            66666677777778877788889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 044334          302 DIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRNS  356 (358)
Q Consensus       302 diil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~~~  356 (358)
                      |+||.||||++|..++++||.+|+||++++.|.++.|+..+.+.+++..+++|++
T Consensus       715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~p  769 (972)
T KOG0202|consen  715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEP  769 (972)
T ss_pred             hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999999999999999999999999999999999998875

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=100.00  E-value=7.5e-59  Score=488.79  Aligned_cols=331  Identities=21%  Similarity=0.238  Sum_probs=270.4

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCc---------------ee--------------CCCccCC
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDI---------------RV--------------TGDQIPA   66 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~---------------~V--------------~G~~IPa   66 (358)
                      ++|.++++|+++++++..+++++++|+++.+++|+++. +++               .|              +||+|||
T Consensus       120 ~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa  199 (902)
T PRK10517        120 EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA  199 (902)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence            57999999999999999999999999999999998764 211               12              8999999


Q ss_pred             CEEEEeeCceEEecCCCcCCCcceeeecCC------------c-eEEE-----------Eeeecccccch----------
Q 044334           67 DGLFLNGHSLKVDECSMTGETDRWLWLRAR------------H-FCWN-----------EHCLGTRDEMG----------  112 (358)
Q Consensus        67 Dg~vl~g~~~~vDes~lTGEs~Pv~k~~~~------------~-~~~~-----------V~~~G~~T~~g----------  112 (358)
                      ||+|++|+++.||||+|||||.||.|.+++            + ++.|           |++||.+|.+|          
T Consensus       200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~  279 (902)
T PRK10517        200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD  279 (902)
T ss_pred             eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence            999999966899999999999999998764            1 3333           99999999999          


Q ss_pred             ---------hHH----------------hhhcccccchHHHHHHHHHHHHHhhcCCchhHHH------------------
Q 044334          113 ---------NRE----------------FLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL------------------  149 (358)
Q Consensus       113 ---------~~~----------------~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~------------------  149 (358)
                               +..                +..+...+.+|..++..++++++++|||+||+++                  
T Consensus       280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV  359 (902)
T PRK10517        280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV  359 (902)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence                     011                0111112346888999999999999999999988                  


Q ss_pred             ----------HHHHHhhCceeeEeecCCC--------C--ce-------------eEcCCccHHHHHHHHHHhcCC----
Q 044334          150 ----------LQEAVGLNTICNVYKSNSE--------S--TT-------------EITGSPTEKAILSWAVFDLGM----  192 (358)
Q Consensus       150 ----------~~~~~~l~~t~t~~~~~~~--------~--~~-------------~~~g~~~e~all~~a~~~~~~----  192 (358)
                                -++.+|+|||||+|+++..        +  ..             ...|||+|.|++.+++ +.+.    
T Consensus       360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~-~~~~~~~~  438 (902)
T PRK10517        360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVD-EESARSLA  438 (902)
T ss_pred             ecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHH-hcchhhhh
Confidence                      4677999999999997411        0  00             1147899999999876 3210    


Q ss_pred             -CC----------Cc-----------------------------------------------------hHHHhccCceEE
Q 044334          193 -NR----------NN-----------------------------------------------------TDVAAKSLRCMA  208 (358)
Q Consensus       193 -~~----------~~-----------------------------------------------------~~~a~~G~rvl~  208 (358)
                       .+          ..                                                     +.++++|+|+++
T Consensus       439 ~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla  518 (902)
T PRK10517        439 SRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVA  518 (902)
T ss_pred             hcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEE
Confidence             00          00                                                     235778999999


Q ss_pred             EEeeccc------------c---------------------------C-Cceeeecccccccchhhhhhccccc------
Q 044334          209 FARTKVA------------E---------------------------A-DDEVIEGVQFRNLSAEEGVAKIENI------  242 (358)
Q Consensus       209 ~a~~~~~------------~---------------------------~-~~~~ltGd~~~~~~~~~~~~~~~~~------  242 (358)
                      +||++.+            +                           + +..|+|||+..  ++.++++.++..      
T Consensus       519 vA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~--tA~~IA~~lGI~~~~v~~  596 (902)
T PRK10517        519 VATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSEL--VAAKVCHEVGLDAGEVLI  596 (902)
T ss_pred             EEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHcCCCccCcee
Confidence            9997431            1                           3 67888998865  455566655554      


Q ss_pred             -------------------eeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCE
Q 044334          243 -------------------RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDI  303 (358)
Q Consensus       243 -------------------~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adi  303 (358)
                                         .||||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|+||++||+
T Consensus       597 G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADi  675 (902)
T PRK10517        597 GSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADI  675 (902)
T ss_pred             HHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCE
Confidence                               899999999999999999999999999999999999999999999999 999999999999


Q ss_pred             EEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          304 IIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       304 il~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      |+++|||..|++++++||++++|+++++.|.++.|+..+...+++.++
T Consensus       676 VLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~  723 (902)
T PRK10517        676 ILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAF  723 (902)
T ss_pred             EEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999887777766543

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=100.00  E-value=2.2e-58  Score=490.01  Aligned_cols=338  Identities=40%  Similarity=0.570  Sum_probs=279.0

Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCcee-----------------------CCCccCCC
Q 044334           13 LGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES--SDIRV-----------------------TGDQIPAD   67 (358)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~--~~~~V-----------------------~G~~IPaD   67 (358)
                      +++..+|+|+++++++++++..+++++++++++++++|++..  ++++|                       +||+||||
T Consensus       122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD  201 (941)
T TIGR01517       122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPAD  201 (941)
T ss_pred             CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEeccc
Confidence            456678999999999999999999999999999999998643  45555                       99999999


Q ss_pred             EEEEeeCceEEecCCCcCCCcceeeecCCc--eEEE-----------Eeeecccccch----------------------
Q 044334           68 GLFLNGHSLKVDECSMTGETDRWLWLRARH--FCWN-----------EHCLGTRDEMG----------------------  112 (358)
Q Consensus        68 g~vl~g~~~~vDes~lTGEs~Pv~k~~~~~--~~~~-----------V~~~G~~T~~g----------------------  112 (358)
                      |+|++|.++.||||+|||||.|+.|.+++.  ++.|           |++||.+|.+|                      
T Consensus       202 ~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~  281 (941)
T TIGR01517       202 GVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSEL  281 (941)
T ss_pred             EEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHH
Confidence            999999779999999999999999998765  4443           99999999988                      


Q ss_pred             ------------hHHhhhc----cc----c--------cchHHHHHHHHHHHHHhhcCCchhHHH---------------
Q 044334          113 ------------NREFLGT----NT----K--------VDDVIYIIAAAVTIIVVAIPEGLPLAL---------------  149 (358)
Q Consensus       113 ------------~~~~~~~----~~----~--------~~~~~~~~~~~~~~lv~a~P~~L~la~---------------  149 (358)
                                  +..|..+    ..    .        +.++...+..++++++++|||+||+++               
T Consensus       282 ~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~  361 (941)
T TIGR01517       282 AGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDN  361 (941)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCC
Confidence                        0001000    00    0        125677889999999999999999998               


Q ss_pred             -------------HHHHHhhCceeeEeecCC--------CC-------------------------------------ce
Q 044334          150 -------------LQEAVGLNTICNVYKSNS--------ES-------------------------------------TT  171 (358)
Q Consensus       150 -------------~~~~~~l~~t~t~~~~~~--------~~-------------------------------------~~  171 (358)
                                   .++.+|+|||||+|+++.        +.                                     .+
T Consensus       362 ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~  441 (941)
T TIGR01517       362 NLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKR  441 (941)
T ss_pred             CEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCcc
Confidence                         467789999999998731        00                                     01


Q ss_pred             eEcCCccHHHHHHHHHHhcCCCC---------------Cc----------------------------------------
Q 044334          172 EITGSPTEKAILSWAVFDLGMNR---------------NN----------------------------------------  196 (358)
Q Consensus       172 ~~~g~~~e~all~~a~~~~~~~~---------------~~----------------------------------------  196 (358)
                      ...|||+|.|+++++. +.+.+.               +.                                        
T Consensus       442 ~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~  520 (941)
T TIGR01517       442 AFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGE  520 (941)
T ss_pred             ccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCC
Confidence            2358999999999987 443221               00                                        


Q ss_pred             ---------------hHHHhccCceEEEEeeccc-----------c----------------------------C-Ccee
Q 044334          197 ---------------TDVAAKSLRCMAFARTKVA-----------E----------------------------A-DDEV  221 (358)
Q Consensus       197 ---------------~~~a~~G~rvl~~a~~~~~-----------~----------------------------~-~~~~  221 (358)
                                     ++++++|+|++++||++.+           .                            + +..|
T Consensus       521 ~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~m  600 (941)
T TIGR01517       521 ATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRM  600 (941)
T ss_pred             cccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEE
Confidence                           1256789999999998742           1                            3 6788


Q ss_pred             eecccccccchhhhhhccccc---------------------------eeeecCChhhHHHHHHhhcCCCcEEEEecCCC
Q 044334          222 IEGVQFRNLSAEEGVAKIENI---------------------------RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGT  274 (358)
Q Consensus       222 ltGd~~~~~~~~~~~~~~~~~---------------------------~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~  274 (358)
                      +|||+..  ++.++++.++..                           .||||++|+||.++|+.||++|++|+|+|||+
T Consensus       601 iTGD~~~--tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGv  678 (941)
T TIGR01517       601 VTGDNID--TAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT  678 (941)
T ss_pred             ECCCChH--HHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence            8888865  555566655543                           79999999999999999999999999999999


Q ss_pred             CCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044334          275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKF  353 (358)
Q Consensus       275 ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~  353 (358)
                      ||+|||++||||||||.+|+++|+++||+++++|+|++|++++++||++++++++++.|.+++|+..++++++|.++.+
T Consensus       679 NDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~  757 (941)
T TIGR01517       679 NDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS  757 (941)
T ss_pred             chHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999889999999999999999999999999999999999999999999999999999998887754

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=100.00  E-value=2.4e-58  Score=485.59  Aligned_cols=333  Identities=20%  Similarity=0.230  Sum_probs=270.3

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-Cc---------------ee--------------CCCcc
Q 044334           15 PKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESS-DI---------------RV--------------TGDQI   64 (358)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~---------------~V--------------~G~~I   64 (358)
                      ..++|.+++.|+++++++..+++++++|+++++++|+++.+ ++               .|              +||+|
T Consensus       107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I  186 (903)
T PRK15122        107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI  186 (903)
T ss_pred             ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence            34689999999999999999999999999999999987642 11               12              99999


Q ss_pred             CCCEEEEeeCceEEecCCCcCCCcceeeec--C---------------------CceEEE-----------Eeeeccccc
Q 044334           65 PADGLFLNGHSLKVDECSMTGETDRWLWLR--A---------------------RHFCWN-----------EHCLGTRDE  110 (358)
Q Consensus        65 PaDg~vl~g~~~~vDes~lTGEs~Pv~k~~--~---------------------~~~~~~-----------V~~~G~~T~  110 (358)
                      ||||+|++|.++.||||+|||||.||.|.+  +                     +.++.|           |++||.+|+
T Consensus       187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~  266 (903)
T PRK15122        187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY  266 (903)
T ss_pred             eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence            999999999668999999999999999975  1                     223333           999999999


Q ss_pred             ch--------------h----HHhh----------------hcccccchHHHHHHHHHHHHHhhcCCchhHHH-------
Q 044334          111 MG--------------N----REFL----------------GTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL-------  149 (358)
Q Consensus       111 ~g--------------~----~~~~----------------~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~-------  149 (358)
                      +|              +    ..+.                .......++...+..++++++++|||+||+++       
T Consensus       267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g  346 (903)
T PRK15122        267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKG  346 (903)
T ss_pred             hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence            99              0    0000                01112346888999999999999999999988       


Q ss_pred             ---------------------HHHHHhhCceeeEeecCCC--------C---------------ceeEcCCccHHHHHHH
Q 044334          150 ---------------------LQEAVGLNTICNVYKSNSE--------S---------------TTEITGSPTEKAILSW  185 (358)
Q Consensus       150 ---------------------~~~~~~l~~t~t~~~~~~~--------~---------------~~~~~g~~~e~all~~  185 (358)
                                           -++.+|+|||||+|+++..        +               .....|||+|.|++++
T Consensus       347 ~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~  426 (903)
T PRK15122        347 AIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAF  426 (903)
T ss_pred             HHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence                                 4677999999999987310        0               0112479999999999


Q ss_pred             HHHhcCCC-----CCc---------------------------------------------------------------h
Q 044334          186 AVFDLGMN-----RNN---------------------------------------------------------------T  197 (358)
Q Consensus       186 a~~~~~~~-----~~~---------------------------------------------------------------~  197 (358)
                      +. +.+.+     +..                                                               +
T Consensus       427 a~-~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~  505 (903)
T PRK15122        427 AE-GNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAE  505 (903)
T ss_pred             HH-HcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHH
Confidence            87 43311     000                                                               1


Q ss_pred             HHHhccCceEEEEeecc-------------c-c---------------------------C-Cceeeecccccccchhhh
Q 044334          198 DVAAKSLRCMAFARTKV-------------A-E---------------------------A-DDEVIEGVQFRNLSAEEG  235 (358)
Q Consensus       198 ~~a~~G~rvl~~a~~~~-------------~-~---------------------------~-~~~~ltGd~~~~~~~~~~  235 (358)
                      .++++|+|++++||++.             + +                           + +..|+|||+..  ++.++
T Consensus       506 ~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~--tA~aI  583 (903)
T PRK15122        506 AYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPI--VTAKI  583 (903)
T ss_pred             HHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHH--HHHHH
Confidence            34678999999998652             1 0                           3 67889999865  55566


Q ss_pred             hhccccc-------------------------eeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          236 VAKIENI-------------------------RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       236 ~~~~~~~-------------------------~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      ++.++..                         +||||++|+||.++|+.||++|++|+|+|||+||+|||++||||||||
T Consensus       584 A~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg  663 (903)
T PRK15122        584 CREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD  663 (903)
T ss_pred             HHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC
Confidence            6666654                         799999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          291 IEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       291 ~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                       +|+|+||++||+|+++|||+.|++++++||++++|+++++.|.++.|+..+...+++.++
T Consensus       664 -~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~  723 (903)
T PRK15122        664 -SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF  723 (903)
T ss_pred             -cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence             999999999999999999999999999999999999999999999998886665555443

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.8e-58  Score=461.53  Aligned_cols=333  Identities=21%  Similarity=0.261  Sum_probs=279.1

Q ss_pred             CCcchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc-ee------------------------CCCccCCCEE
Q 044334           16 KEGWFD-GDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDI-RV------------------------TGDQIPADGL   69 (358)
Q Consensus        16 ~~~~~~-~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~V------------------------~G~~IPaDg~   69 (358)
                      ...||| +.+++.++.++.+++.....|+...+.+|..+++.. .+                        ||++||+||+
T Consensus       337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~  416 (951)
T KOG0207|consen  337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV  416 (951)
T ss_pred             cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence            556777 555666777888999999999999999998877432 22                        9999999999


Q ss_pred             EEeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch--------------------------
Q 044334           70 FLNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG--------------------------  112 (358)
Q Consensus        70 vl~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g--------------------------  112 (358)
                      |++| +++||||++||||+||.|++|+++++|           ++++|.+|.++                          
T Consensus       417 Vv~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~y  495 (951)
T KOG0207|consen  417 VVDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGY  495 (951)
T ss_pred             EEeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhc
Confidence            9999 789999999999999999999999998           99999999999                          


Q ss_pred             ---------hHHhhhccccc-----------chHHHHHHHHHHHHHhhcCCchhHHH-----------------------
Q 044334          113 ---------NREFLGTNTKV-----------DDVIYIIAAAVTIIVVAIPEGLPLAL-----------------------  149 (358)
Q Consensus       113 ---------~~~~~~~~~~~-----------~~~~~~~~~~~~~lv~a~P~~L~la~-----------------------  149 (358)
                               +..|..|.+.+           ..+..+|.++++++++||||+|+||+                       
T Consensus       496 FvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~  575 (951)
T KOG0207|consen  496 FVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEA  575 (951)
T ss_pred             CCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHH
Confidence                     12222222211           46778899999999999999999998                       


Q ss_pred             -----HHHHHhhCceeeEeecCCC--------C-------------ceeEcCCccHHHHHHHHHHhcCCCCCc-------
Q 044334          150 -----LQEAVGLNTICNVYKSNSE--------S-------------TTEITGSPTEKAILSWAVFDLGMNRNN-------  196 (358)
Q Consensus       150 -----~~~~~~l~~t~t~~~~~~~--------~-------------~~~~~g~~~e~all~~a~~~~~~~~~~-------  196 (358)
                           .++.++||||||+|+++.-        +             ...-.-||.-.|+..++. ......+.       
T Consensus       576 LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak-~~~~~~~~~~~~~~~  654 (951)
T KOG0207|consen  576 LEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSEHPIGKAIVDYAK-EKLVEPNPEGVLSFE  654 (951)
T ss_pred             HHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHH-hcccccCccccceee
Confidence                 4677899999999997421        0             011124788889999998 55411111       


Q ss_pred             -----------------------------------------hHHHhccCceEEEEeecccc-------------------
Q 044334          197 -----------------------------------------TDVAAKSLRCMAFARTKVAE-------------------  216 (358)
Q Consensus       197 -----------------------------------------~~~a~~G~rvl~~a~~~~~~-------------------  216 (358)
                                                               +...+.|..+..++.++...                   
T Consensus       655 ~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~  734 (951)
T KOG0207|consen  655 YFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAE  734 (951)
T ss_pred             cccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHH
Confidence                                                     34456788888877776542                   


Q ss_pred             ----C-CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC
Q 044334          217 ----A-DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI  291 (358)
Q Consensus       217 ----~-~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~  291 (358)
                          + +..|+|||+..  ++..+++.++.+.||+++.|+||.++|+.+|+++++|+|||||+||+|||.+|||||+|| 
T Consensus       735 Lk~~Gi~v~mLTGDn~~--aA~svA~~VGi~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-  811 (951)
T KOG0207|consen  735 LKSMGIKVVMLTGDNDA--AARSVAQQVGIDNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-  811 (951)
T ss_pred             HHhcCceEEEEcCCCHH--HHHHHHHhhCcceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-
Confidence                3 78999999977  677899999999999999999999999999999999999999999999999999999999 


Q ss_pred             CchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          292 EGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       292 ~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      .|+++|.++||++++++|+..++.+++++|++++++|+|+.|+++||++++++++ |.|.||+
T Consensus       812 ~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa-gvF~P~~  873 (951)
T KOG0207|consen  812 AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA-GVFAPFG  873 (951)
T ss_pred             cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe-ecccCCc
Confidence            8899999999999999999999999999999999999999999999999999988 5666665

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=100.00  E-value=1.4e-57  Score=478.98  Aligned_cols=331  Identities=21%  Similarity=0.243  Sum_probs=270.1

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCc---e------------e--------------CCCccCC
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDI---R------------V--------------TGDQIPA   66 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~---~------------V--------------~G~~IPa   66 (358)
                      ++|+++++|+++++++..++.++++|+++++++|+++. +++   +            |              +||+|||
T Consensus        86 ~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa  165 (867)
T TIGR01524        86 DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA  165 (867)
T ss_pred             hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence            58999999999999999999999999999999888764 211   1            2              8999999


Q ss_pred             CEEEEeeCceEEecCCCcCCCcceeeecCC------------c-eEEE-----------Eeeecccccch----------
Q 044334           67 DGLFLNGHSLKVDECSMTGETDRWLWLRAR------------H-FCWN-----------EHCLGTRDEMG----------  112 (358)
Q Consensus        67 Dg~vl~g~~~~vDes~lTGEs~Pv~k~~~~------------~-~~~~-----------V~~~G~~T~~g----------  112 (358)
                      ||+|++|+++.||||+|||||.||.|.+++            + ++.|           |++||.+|.+|          
T Consensus       166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~  245 (867)
T TIGR01524       166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR  245 (867)
T ss_pred             cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence            999999966899999999999999998765            1 3333           99999999999          


Q ss_pred             --------hHH----------------hhhcccccchHHHHHHHHHHHHHhhcCCchhHHH-------------------
Q 044334          113 --------NRE----------------FLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL-------------------  149 (358)
Q Consensus       113 --------~~~----------------~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~-------------------  149 (358)
                              +..                +..+.....+|...+..++++++++|||+||+++                   
T Consensus       246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk  325 (867)
T TIGR01524       246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK  325 (867)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence                    000                1111112346788999999999999999999988                   


Q ss_pred             ---------HHHHHhhCceeeEeecCCC--------C--ce-------------eEcCCccHHHHHHHHHHhcCC-----
Q 044334          150 ---------LQEAVGLNTICNVYKSNSE--------S--TT-------------EITGSPTEKAILSWAVFDLGM-----  192 (358)
Q Consensus       150 ---------~~~~~~l~~t~t~~~~~~~--------~--~~-------------~~~g~~~e~all~~a~~~~~~-----  192 (358)
                               -++.+|+|||||+|+++..        +  ..             ...+||+|.|++.++. +...     
T Consensus       326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~-~~~~~~~~~  404 (867)
T TIGR01524       326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLD-ESAARQTAS  404 (867)
T ss_pred             cchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hhchhhHhh
Confidence                     4778999999999987411        0  00             1136999999999876 3210     


Q ss_pred             --------CC---------------C-c---------------------------------------hHHHhccCceEEE
Q 044334          193 --------NR---------------N-N---------------------------------------TDVAAKSLRCMAF  209 (358)
Q Consensus       193 --------~~---------------~-~---------------------------------------~~~a~~G~rvl~~  209 (358)
                              .+               . .                                       +.++++|+|++++
T Consensus       405 ~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav  484 (867)
T TIGR01524       405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAV  484 (867)
T ss_pred             cCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence                    00               0 0                                       2457789999999


Q ss_pred             Eeecc-----------cc----------------------------C-Cceeeecccccccchhhhhhccccc-------
Q 044334          210 ARTKV-----------AE----------------------------A-DDEVIEGVQFRNLSAEEGVAKIENI-------  242 (358)
Q Consensus       210 a~~~~-----------~~----------------------------~-~~~~ltGd~~~~~~~~~~~~~~~~~-------  242 (358)
                      ||++.           +.                            + +..|+|||+..  ++.++++.++..       
T Consensus       485 A~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~--tA~aIA~~lGI~~~~v~~g  562 (867)
T TIGR01524       485 ATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEI--VTARICQEVGIDANDFLLG  562 (867)
T ss_pred             EEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHcCCCCCCeeec
Confidence            99642           10                            3 67889999965  555666666655       


Q ss_pred             ------------------eeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEE
Q 044334          243 ------------------RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDII  304 (358)
Q Consensus       243 ------------------~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adii  304 (358)
                                        ++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+++||++||+|
T Consensus       563 ~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiV  641 (867)
T TIGR01524       563 ADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDII  641 (867)
T ss_pred             HhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEE
Confidence                              899999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             EeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          305 IMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       305 l~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      +++|||+.|++++++||++++|+++++.|.++.|+..+...+++.++
T Consensus       642 Lldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~  688 (867)
T TIGR01524       642 LLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF  688 (867)
T ss_pred             EecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999887766665543

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=100.00  E-value=1.3e-56  Score=473.75  Aligned_cols=335  Identities=30%  Similarity=0.448  Sum_probs=277.0

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEe
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLN   72 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~   72 (358)
                      ++|.|++.++++++++..+++++++|+++.+++|.++. ++++|                       +||+|||||+|++
T Consensus        78 g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~  157 (884)
T TIGR01522        78 GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVE  157 (884)
T ss_pred             cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEE
Confidence            47999999999999999999999999999999999876 45555                       9999999999999


Q ss_pred             eCceEEecCCCcCCCcceeeecCC-------------ceEEE------------Eeeecccccch---------------
Q 044334           73 GHSLKVDECSMTGETDRWLWLRAR-------------HFCWN------------EHCLGTRDEMG---------------  112 (358)
Q Consensus        73 g~~~~vDes~lTGEs~Pv~k~~~~-------------~~~~~------------V~~~G~~T~~g---------------  112 (358)
                      |+++.||||+|||||.||.|.+++             +.+++            |++||.+|.+|               
T Consensus       158 g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~  237 (884)
T TIGR01522       158 AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTP  237 (884)
T ss_pred             cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCc
Confidence            966899999999999999998764             24444            99999999999               


Q ss_pred             ----hH----------------HhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH-----------------------
Q 044334          113 ----NR----------------EFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL-----------------------  149 (358)
Q Consensus       113 ----~~----------------~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~-----------------------  149 (358)
                          +.                .+...+..+.++..++..++++++++|||+||+++                       
T Consensus       238 lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a  317 (884)
T TIGR01522       238 LQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPS  317 (884)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHH
Confidence                00                01111223456888999999999999999999987                       


Q ss_pred             -----HHHHHhhCceeeEeecCC--------CCc----------------------------------------------
Q 044334          150 -----LQEAVGLNTICNVYKSNS--------EST----------------------------------------------  170 (358)
Q Consensus       150 -----~~~~~~l~~t~t~~~~~~--------~~~----------------------------------------------  170 (358)
                           -++.+|+|||||+|+++.        +..                                              
T Consensus       318 ~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~  397 (884)
T TIGR01522       318 VETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFR  397 (884)
T ss_pred             HHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeec
Confidence                 366789999999998731        000                                              


Q ss_pred             ---eeEcCCccHHHHHHHHHHhcCCCC----------------------------Cc-----------------------
Q 044334          171 ---TEITGSPTEKAILSWAVFDLGMNR----------------------------NN-----------------------  196 (358)
Q Consensus       171 ---~~~~g~~~e~all~~a~~~~~~~~----------------------------~~-----------------------  196 (358)
                         .+..|||+|.|+++++. +.+.+.                            ..                       
T Consensus       398 ~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~  476 (884)
T TIGR01522       398 NEADTLLGNPTDVALIELLM-KFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK  476 (884)
T ss_pred             CCCCCcCCChHHHHHHHHHH-HcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc
Confidence               01237899999999987 543210                            00                       


Q ss_pred             -------------------hHHHhccCceEEEEeecccc----------------------------C-Cceeeeccccc
Q 044334          197 -------------------TDVAAKSLRCMAFARTKVAE----------------------------A-DDEVIEGVQFR  228 (358)
Q Consensus       197 -------------------~~~a~~G~rvl~~a~~~~~~----------------------------~-~~~~ltGd~~~  228 (358)
                                         ++++++|+|++++||++.+.                            + +..|+|||+..
T Consensus       477 ~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~  556 (884)
T TIGR01522       477 DGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQE  556 (884)
T ss_pred             CCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHH
Confidence                               23567899999999997532                            3 67888888865


Q ss_pred             ccchhhhhhcccc---------------------------ceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccc
Q 044334          229 NLSAEEGVAKIEN---------------------------IRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPK  281 (358)
Q Consensus       229 ~~~~~~~~~~~~~---------------------------~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~  281 (358)
                        ++.++++.++.                           ..||||++|+||.++|+.||++|+.|+|+|||+||+|||+
T Consensus       557 --tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~  634 (884)
T TIGR01522       557 --TAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALK  634 (884)
T ss_pred             --HHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHH
Confidence              44455555544                           3699999999999999999999999999999999999999


Q ss_pred             cCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          282 VADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       282 ~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      +|||||+||.+|+++++++||+++++|+++.+++++++||++++|+++|+.|.++.|+..+.+.+++.+++++
T Consensus       635 ~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~  707 (884)
T TIGR01522       635 LADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFP  707 (884)
T ss_pred             hCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCC
Confidence            9999999986799999999999999999999999999999999999999999999999999888877777654

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.5e-57  Score=475.91  Aligned_cols=334  Identities=31%  Similarity=0.442  Sum_probs=282.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEeeCc
Q 044334           20 FDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLNGHS   75 (358)
Q Consensus        20 ~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~g~~   75 (358)
                      .++..|+.+++++.+++++|++|+++.+++|+++. ++++|                       +||+||||+++++++.
T Consensus       104 ~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~  183 (917)
T COG0474         104 VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD  183 (917)
T ss_pred             cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC
Confidence            56778999999999999999999999999999987 66666                       8999999999999976


Q ss_pred             eEEecCCCcCCCcceeeecC-------------CceEEE------------Eeeecccccch------------------
Q 044334           76 LKVDECSMTGETDRWLWLRA-------------RHFCWN------------EHCLGTRDEMG------------------  112 (358)
Q Consensus        76 ~~vDes~lTGEs~Pv~k~~~-------------~~~~~~------------V~~~G~~T~~g------------------  112 (358)
                      +.||||+|||||.||.|...             ++++++            |++||.+|.+|                  
T Consensus       184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~  263 (917)
T COG0474         184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQR  263 (917)
T ss_pred             ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHH
Confidence            79999999999999999722             344554            99999999999                  


Q ss_pred             -----------------hHHhhhcccccch-HHHHHHHHHHHHHhhcCCchhHHH-------------------------
Q 044334          113 -----------------NREFLGTNTKVDD-VIYIIAAAVTIIVVAIPEGLPLAL-------------------------  149 (358)
Q Consensus       113 -----------------~~~~~~~~~~~~~-~~~~~~~~~~~lv~a~P~~L~la~-------------------------  149 (358)
                                       ...|...+..+.. |...+..++++++.++|++||+.+                         
T Consensus       264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE  343 (917)
T COG0474         264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIE  343 (917)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhh
Confidence                             1111222222233 789999999999999999999999                         


Q ss_pred             ---HHHHHhhCceeeEeecC--------CC-----C-----------------------c-----eeEcCCccHHHHHHH
Q 044334          150 ---LQEAVGLNTICNVYKSN--------SE-----S-----------------------T-----TEITGSPTEKAILSW  185 (358)
Q Consensus       150 ---~~~~~~l~~t~t~~~~~--------~~-----~-----------------------~-----~~~~g~~~e~all~~  185 (358)
                         -++.+|.|||||+|+++        .+     .                       .     ++..|||+|.|++++
T Consensus       344 ~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~  423 (917)
T COG0474         344 TLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEF  423 (917)
T ss_pred             hccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHH
Confidence               47788999999999872        00     0                       0     234799999999999


Q ss_pred             HHHhcCC--CCCc-------------------------------------------------------------------
Q 044334          186 AVFDLGM--NRNN-------------------------------------------------------------------  196 (358)
Q Consensus       186 a~~~~~~--~~~~-------------------------------------------------------------------  196 (358)
                      +. +.+.  +...                                                                   
T Consensus       424 a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~  502 (917)
T COG0474         424 AE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAV  502 (917)
T ss_pred             HH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHH
Confidence            99 7665  3211                                                                   


Q ss_pred             hHHHhccCceEEEEeecccc------------------------------------------------------------
Q 044334          197 TDVAAKSLRCMAFARTKVAE------------------------------------------------------------  216 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~------------------------------------------------------------  216 (358)
                      ++++++|+|++++||+..+.                                                            
T Consensus       503 ~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~  582 (917)
T COG0474         503 KELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAK  582 (917)
T ss_pred             HHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHH
Confidence            67899999999999984421                                                            


Q ss_pred             ------CC--ceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCccee
Q 044334          217 ------AD--DEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPW  288 (358)
Q Consensus       217 ------~~--~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia  288 (358)
                            +.  ..+++|++++.++++++.+.+....||||++|+||.++|+.||+.|+.|+|+|||+||+||||+|||||+
T Consensus       583 ~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIa  662 (917)
T COG0474         583 ECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIA  662 (917)
T ss_pred             HcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEE
Confidence                  12  3466777777777777888888888999999999999999999999999999999999999999999999


Q ss_pred             cCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          289 MGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       289 ~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      ||.+|++++|++||+++.++++..+..++++||++|.|+++++.|.+.+|+..+.+.+++.+..++
T Consensus       663 mg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~  728 (917)
T COG0474         663 MGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF  728 (917)
T ss_pred             ecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            998899999999999999999999999999999999999999999999999988888888777655

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=100.00  E-value=1.3e-55  Score=446.85  Aligned_cols=327  Identities=21%  Similarity=0.214  Sum_probs=260.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccCCC--ce-e-----------------------CCCccCCCEE
Q 044334           20 FDGDGVISAVLVVVIVSAVS----NFKQSRQFQALANESSD--IR-V-----------------------TGDQIPADGL   69 (358)
Q Consensus        20 ~~~~~i~~~~~~~~~i~~~~----~~~~~~~~~~l~~~~~~--~~-V-----------------------~G~~IPaDg~   69 (358)
                      ++++.|+++++++.+++.++    ++|+++++++|+++.++  .+ |                       +||+||+||+
T Consensus        63 ~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~  142 (673)
T PRK14010         63 LYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGK  142 (673)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeE
Confidence            56777777777666666555    78999999999988743  33 2                       9999999999


Q ss_pred             EEeeCceEEecCCCcCCCcceeeecC---CceEEE-----------Eeeecccccch-----------------------
Q 044334           70 FLNGHSLKVDECSMTGETDRWLWLRA---RHFCWN-----------EHCLGTRDEMG-----------------------  112 (358)
Q Consensus        70 vl~g~~~~vDes~lTGEs~Pv~k~~~---~~~~~~-----------V~~~G~~T~~g-----------------------  112 (358)
                      |++| .+.||||+|||||.||.|++|   +.+++|           |+++|.+|++|                       
T Consensus       143 vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l  221 (673)
T PRK14010        143 VIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTL  221 (673)
T ss_pred             EEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHH
Confidence            9999 689999999999999999988   666655           99999999999                       


Q ss_pred             --------hH--HhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHH
Q 044334          113 --------NR--EFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAV  154 (358)
Q Consensus       113 --------~~--~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~  154 (358)
                              +.  .|...+....++...+...+++++++|||+||..+                            -++.+
T Consensus       222 ~~~l~ii~l~~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI  301 (673)
T PRK14010        222 LMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVL  301 (673)
T ss_pred             HHHHhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEE
Confidence                    00  00000000012334566777888889999998776                            35678


Q ss_pred             hhCceeeEeecCCCCc-e-------------------eEcCCccHHHHHHHHHHhcCCCCC----------c--------
Q 044334          155 GLNTICNVYKSNSEST-T-------------------EITGSPTEKAILSWAVFDLGMNRN----------N--------  196 (358)
Q Consensus       155 ~l~~t~t~~~~~~~~~-~-------------------~~~g~~~e~all~~a~~~~~~~~~----------~--------  196 (358)
                      ++|||||+|+++.... .                   ....||++.|++++++ +.+.+..          .        
T Consensus       302 ~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~-~~~~~~~~~~~~~~pF~~~~k~~gv~  380 (673)
T PRK14010        302 ILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLAY-KQHIDLPQEVGEYIPFTAETRMSGVK  380 (673)
T ss_pred             EEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCCCCChHHHHHHHHHH-HcCCCchhhhcceeccccccceeEEE
Confidence            9999999999531100 0                   0124789999999987 5433210          0        


Q ss_pred             ---------------------------------hHHHhccCceEEEEeecccc-----------------------C-Cc
Q 044334          197 ---------------------------------TDVAAKSLRCMAFARTKVAE-----------------------A-DD  219 (358)
Q Consensus       197 ---------------------------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~  219 (358)
                                                       ++++++|+|+++++.+....                       + +.
T Consensus       381 ~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~v  460 (673)
T PRK14010        381 FTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIET  460 (673)
T ss_pred             ECCEEEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeE
Confidence                                             13467899999887542211                       3 77


Q ss_pred             eeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHh
Q 044334          220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKE  299 (358)
Q Consensus       220 ~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~  299 (358)
                      .|+|||+..  ++.++++.++..++++|++||||.++|+.+|++|+.|+|+|||+||+|||++|||||||| +|+++||+
T Consensus       461 vMiTGDn~~--TA~aIA~elGI~~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAke  537 (673)
T PRK14010        461 VMCTGDNEL--TAATIAKEAGVDRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKE  537 (673)
T ss_pred             EEECCCCHH--HHHHHHHHcCCceEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHH
Confidence            999999966  788999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             cCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          300 GSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       300 ~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      +||+++++|||..|++++++||++|.|+++++.|.+..|+..++..+.+.|.
T Consensus       538 AADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~  589 (673)
T PRK14010        538 AANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM  589 (673)
T ss_pred             hCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998876665554443

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=100.00  E-value=1e-53  Score=455.78  Aligned_cols=339  Identities=26%  Similarity=0.358  Sum_probs=274.9

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEE
Q 044334           15 PKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLF   70 (358)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~v   70 (358)
                      ..++|++++.++++++++..+++++++|+++.+++|.++. ++++|                       +||+|||||++
T Consensus       100 ~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~i  179 (997)
T TIGR01106       100 QNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRI  179 (997)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEE
Confidence            3467999999999999999999999999999999999875 44444                       99999999999


Q ss_pred             EeeCceEEecCCCcCCCcceeeecCCc----------eEEE-----------Eeeecccccch-----------------
Q 044334           71 LNGHSLKVDECSMTGETDRWLWLRARH----------FCWN-----------EHCLGTRDEMG-----------------  112 (358)
Q Consensus        71 l~g~~~~vDes~lTGEs~Pv~k~~~~~----------~~~~-----------V~~~G~~T~~g-----------------  112 (358)
                      ++|..+.||||+|||||.||.|.+++.          ++.|           |++||.+|.+|                 
T Consensus       180 l~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~  259 (997)
T TIGR01106       180 ISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIA  259 (997)
T ss_pred             EEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHH
Confidence            999668999999999999999987641          2332           99999999999                 


Q ss_pred             ------------------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH-------------------------
Q 044334          113 ------------------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL-------------------------  149 (358)
Q Consensus       113 ------------------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~-------------------------  149 (358)
                                        +..|......+.+|...+.+++++++++|||+||+++                         
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE  339 (997)
T TIGR01106       260 IEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVE  339 (997)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHH
Confidence                              0111111223456778889999999999999999988                         


Q ss_pred             ---HHHHHhhCceeeEeecCCC--------------C-----------------------------------------ce
Q 044334          150 ---LQEAVGLNTICNVYKSNSE--------------S-----------------------------------------TT  171 (358)
Q Consensus       150 ---~~~~~~l~~t~t~~~~~~~--------------~-----------------------------------------~~  171 (358)
                         .++.+|+|||||+|+++..              +                                         .+
T Consensus       340 ~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~  419 (997)
T TIGR01106       340 TLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKR  419 (997)
T ss_pred             HhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCccccc
Confidence               4667899999999986310              0                                         01


Q ss_pred             eEcCCccHHHHHHHHHHhcCCCC---------------C------------------c----------------------
Q 044334          172 EITGSPTEKAILSWAVFDLGMNR---------------N------------------N----------------------  196 (358)
Q Consensus       172 ~~~g~~~e~all~~a~~~~~~~~---------------~------------------~----------------------  196 (358)
                      ...|||+|.|+++++. +.+.+.               +                  .                      
T Consensus       420 ~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~  498 (997)
T TIGR01106       420 AVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIH  498 (997)
T ss_pred             ccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcC
Confidence            2358999999999976 321100               0                  0                      


Q ss_pred             ------------------hHHHhccCceEEEEeeccc------------------c------------------------
Q 044334          197 ------------------TDVAAKSLRCMAFARTKVA------------------E------------------------  216 (358)
Q Consensus       197 ------------------~~~a~~G~rvl~~a~~~~~------------------~------------------------  216 (358)
                                        ++++++|+||+++||++++                  +                        
T Consensus       499 g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~  578 (997)
T TIGR01106       499 GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVG  578 (997)
T ss_pred             CCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHH
Confidence                              3478899999999997531                  1                        


Q ss_pred             -----C-Cc-------------------------------------------------eeeecccccccchhhhhhcccc
Q 044334          217 -----A-DD-------------------------------------------------EVIEGVQFRNLSAEEGVAKIEN  241 (358)
Q Consensus       217 -----~-~~-------------------------------------------------~~ltGd~~~~~~~~~~~~~~~~  241 (358)
                           + ..                                                 .+++|++++.++.+++.+.+..
T Consensus       579 ~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~  658 (997)
T TIGR01106       579 KCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKY  658 (997)
T ss_pred             HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHh
Confidence                 1 23                                                 3555655555555556665554


Q ss_pred             ce--eeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          242 IR--VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       242 ~~--v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      ..  ||||++|+||.++|+.||+.|++|+|+|||.||+|||++||||||||.+|+++++++||+++++|+|++|++++++
T Consensus       659 ~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~  738 (997)
T TIGR01106       659 HTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE  738 (997)
T ss_pred             cCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHH
Confidence            43  9999999999999999999999999999999999999999999999977999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          320 GRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       320 ~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      ||+++.|+++++.|.++.|+..+.+.+++.++..+
T Consensus       739 GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~  773 (997)
T TIGR01106       739 GRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIP  773 (997)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCc
Confidence            99999999999999999999998888888877544

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=100.00  E-value=8e-54  Score=456.21  Aligned_cols=334  Identities=26%  Similarity=0.356  Sum_probs=269.4

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEe
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLN   72 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~   72 (358)
                      ++|.|+++|+++++++..++++|++|+++++++|+++. ++++|                       +||+|||||+|++
T Consensus        79 ~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~  158 (1053)
T TIGR01523        79 HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE  158 (1053)
T ss_pred             hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence            57999999999999999999999999999999999987 66666                       9999999999999


Q ss_pred             eCceEEecCCCcCCCcceeeecC--------------CceEEE------------Eeeecccccch-hHHhhh-------
Q 044334           73 GHSLKVDECSMTGETDRWLWLRA--------------RHFCWN------------EHCLGTRDEMG-NREFLG-------  118 (358)
Q Consensus        73 g~~~~vDes~lTGEs~Pv~k~~~--------------~~~~~~------------V~~~G~~T~~g-~~~~~~-------  118 (358)
                      +.++.||||+|||||.||.|.+.              .+++++            |++||.+|.+| +.....       
T Consensus       159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~  238 (1053)
T TIGR01523       159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ  238 (1053)
T ss_pred             eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence            97899999999999999999632              123333            99999999999 111110       


Q ss_pred             ----------------------------------ccc-------------------------ccch-HHHHHHHHHHHHH
Q 044334          119 ----------------------------------TNT-------------------------KVDD-VIYIIAAAVTIIV  138 (358)
Q Consensus       119 ----------------------------------~~~-------------------------~~~~-~~~~~~~~~~~lv  138 (358)
                                                        ..+                         .... +...+.+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~V  318 (1053)
T TIGR01523       239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAI  318 (1053)
T ss_pred             cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence                                              000                         0001 1345667889999


Q ss_pred             hhcCCchhHHH----------------------------HHHHHhhCceeeEeecCC--------C--------------
Q 044334          139 VAIPEGLPLAL----------------------------LQEAVGLNTICNVYKSNS--------E--------------  168 (358)
Q Consensus       139 ~a~P~~L~la~----------------------------~~~~~~l~~t~t~~~~~~--------~--------------  168 (358)
                      .++|++||+.+                            -++.+|.|||||+|+++-        +              
T Consensus       319 a~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~  398 (1053)
T TIGR01523       319 SIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFN  398 (1053)
T ss_pred             HHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCC
Confidence            99999999988                            466789999999887630        0              


Q ss_pred             ----------------------------------------------------------------------CceeEcCCcc
Q 044334          169 ----------------------------------------------------------------------STTEITGSPT  178 (358)
Q Consensus       169 ----------------------------------------------------------------------~~~~~~g~~~  178 (358)
                                                                                            +.+...|||+
T Consensus       399 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~Gdpt  478 (1053)
T TIGR01523       399 PNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPT  478 (1053)
T ss_pred             CcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCcc
Confidence                                                                                  0012358999


Q ss_pred             HHHHHHHHHHhcCCCC--------------------------------Cc------------------------------
Q 044334          179 EKAILSWAVFDLGMNR--------------------------------NN------------------------------  196 (358)
Q Consensus       179 e~all~~a~~~~~~~~--------------------------------~~------------------------------  196 (358)
                      |.||+.++. +.+.+.                                +.                              
T Consensus       479 E~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~K  557 (1053)
T TIGR01523       479 EIAIHVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAK  557 (1053)
T ss_pred             HHHHHHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEe
Confidence            999999987 665420                                00                              


Q ss_pred             ------------------------------------hHHHhccCceEEEEeeccc--------------------c----
Q 044334          197 ------------------------------------TDVAAKSLRCMAFARTKVA--------------------E----  216 (358)
Q Consensus       197 ------------------------------------~~~a~~G~rvl~~a~~~~~--------------------~----  216 (358)
                                                          ++++++|+||+++||++++                    .    
T Consensus       558 GApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~  637 (1053)
T TIGR01523       558 GAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEF  637 (1053)
T ss_pred             CChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEE
Confidence                                                3478899999999998431                    1    


Q ss_pred             ------------------------C-Cceeeeccccc-----------------------------------ccchhhhh
Q 044334          217 ------------------------A-DDEVIEGVQFR-----------------------------------NLSAEEGV  236 (358)
Q Consensus       217 ------------------------~-~~~~ltGd~~~-----------------------------------~~~~~~~~  236 (358)
                                              + +..|+|||+..                                   .++.+++.
T Consensus       638 ~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~  717 (1053)
T TIGR01523       638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVD  717 (1053)
T ss_pred             EEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHH
Confidence                                    2 55667776644                                   22333333


Q ss_pred             hccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHH
Q 044334          237 AKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       237 ~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      +.+....||||++|+||.++|+.||++|++|+|+|||+||+|||+.||||||||.+|+++|+++||+++++|+|++|+++
T Consensus       718 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~  797 (1053)
T TIGR01523       718 DLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA  797 (1053)
T ss_pred             HHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence            33344469999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          317 QRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       317 i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      +++||++++|+++++.|.++.|+..+.+.+++.++
T Consensus       798 i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~  832 (1053)
T TIGR01523       798 IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF  832 (1053)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            99999999999999999999999999888887776

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=100.00  E-value=5.1e-54  Score=445.46  Aligned_cols=330  Identities=19%  Similarity=0.193  Sum_probs=279.2

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-Ccee-----------------------CCCccCCCEEEEe
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESS-DIRV-----------------------TGDQIPADGLFLN   72 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~V-----------------------~G~~IPaDg~vl~   72 (358)
                      +.|.++++++++++++.+++.+++.|+++.+++|.++.+ ++++                       |||+||+||+|++
T Consensus       204 ~~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~  283 (741)
T PRK11033        204 GATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS  283 (741)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence            458999999999999999999999999999999998774 3333                       9999999999999


Q ss_pred             eCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch-------------------hH--------
Q 044334           73 GHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-------------------NR--------  114 (358)
Q Consensus        73 g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-------------------~~--------  114 (358)
                      | ++.||||+|||||+||.|.+||.+++|           |+++|.+|.++                   ..        
T Consensus       284 g-~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~  362 (741)
T PRK11033        284 P-FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTP  362 (741)
T ss_pred             C-cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Confidence            9 689999999999999999999988877           99999999998                   11        


Q ss_pred             --------Hhhhc-ccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhC
Q 044334          115 --------EFLGT-NTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLN  157 (358)
Q Consensus       115 --------~~~~~-~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~  157 (358)
                              .|..+ +..+.+|..++..++++++++|||+|++++                            .++.+++|
T Consensus       363 ~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fD  442 (741)
T PRK11033        363 AIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFD  442 (741)
T ss_pred             HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEe
Confidence                    11111 223346778899999999999999995555                            46678999


Q ss_pred             ceeeEeecCCCCc--------------------eeEcCCccHHHHHHHHHHhcCCCCCc---------------------
Q 044334          158 TICNVYKSNSEST--------------------TEITGSPTEKAILSWAVFDLGMNRNN---------------------  196 (358)
Q Consensus       158 ~t~t~~~~~~~~~--------------------~~~~g~~~e~all~~a~~~~~~~~~~---------------------  196 (358)
                      ||||+|+++..-.                    .....||.+.|++++++ +.+.+.+.                     
T Consensus       443 KTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~-~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~  521 (741)
T PRK11033        443 KTGTLTEGKPQVTDIHPATGISESELLALAAAVEQGSTHPLAQAIVREAQ-VRGLAIPEAESQRALAGSGIEGQVNGERV  521 (741)
T ss_pred             CCCCCcCCceEEEEEEecCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHH-hcCCCCCCCcceEEEeeEEEEEEECCEEE
Confidence            9999998742100                    01235899999999887 65543211                     


Q ss_pred             -------------------hHHHhccCceEEEEeecccc-----------------------C-Cceeeecccccccchh
Q 044334          197 -------------------TDVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNLSAE  233 (358)
Q Consensus       197 -------------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~~~~  233 (358)
                                         +.+.++|+|+++++++....                       + +..++|||+..  ..+
T Consensus       522 ~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~--~a~  599 (741)
T PRK11033        522 LICAPGKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPR--AAA  599 (741)
T ss_pred             EEecchhhhhccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHH--HHH
Confidence                               23567899999999876432                       3 77899999977  667


Q ss_pred             hhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchH
Q 044334          234 EGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSV  313 (358)
Q Consensus       234 ~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i  313 (358)
                      .+++.++.. ++++++|+||.++|+.||++ +.|+|+|||+||+|||+.|||||+|| ++++.++++||++++++++..|
T Consensus       600 ~ia~~lgi~-~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l  676 (741)
T PRK11033        600 AIAGELGID-FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGL  676 (741)
T ss_pred             HHHHHcCCC-eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHH
Confidence            888888875 78999999999999999965 58999999999999999999999999 8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044334          314 VTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKF  353 (358)
Q Consensus       314 ~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~  353 (358)
                      +++++++|+++++|++|+.|++.||+++++++++|++.||
T Consensus       677 ~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~  716 (741)
T PRK11033        677 AQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLW  716 (741)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence            9999999999999999999999999999999999988877

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=100.00  E-value=2.1e-53  Score=431.17  Aligned_cols=315  Identities=23%  Similarity=0.227  Sum_probs=250.9

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--cee------------------------CCCccCCCEE
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSD--IRV------------------------TGDQIPADGL   69 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~--~~V------------------------~G~~IPaDg~   69 (358)
                      ...|..++.+++.++++.+++.++++|+++++++|+++.++  ++|                        +||+||+||+
T Consensus        63 ~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~  142 (679)
T PRK01122         63 GFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGE  142 (679)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEE
Confidence            35567777888888888899999999999999999987642  333                        9999999999


Q ss_pred             EEeeCceEEecCCCcCCCcceeeecCCc---eEEE-----------Eeeecccccch-------------------hHHh
Q 044334           70 FLNGHSLKVDECSMTGETDRWLWLRARH---FCWN-----------EHCLGTRDEMG-------------------NREF  116 (358)
Q Consensus        70 vl~g~~~~vDes~lTGEs~Pv~k~~~~~---~~~~-----------V~~~G~~T~~g-------------------~~~~  116 (358)
                      |++| .+.||||+|||||.||.|++|+.   +++|           |+++|.+|++|                   ...+
T Consensus       143 vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l  221 (679)
T PRK01122        143 VIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTIL  221 (679)
T ss_pred             EEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHH
Confidence            9999 78999999999999999999876   6665           99999999999                   0000


Q ss_pred             h----------------hcccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHH
Q 044334          117 L----------------GTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQE  152 (358)
Q Consensus       117 ~----------------~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~  152 (358)
                      .                ..++.+.+  ..+..++++++++|||+|+.++                            -.+
T Consensus       222 ~~~l~~i~l~~~~~~~~~~~~~g~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~  299 (679)
T PRK01122        222 LAGLTIIFLLVVATLPPFAAYSGGA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVD  299 (679)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCC
Confidence            0                00111112  3677889999999999887655                            356


Q ss_pred             HHhhCceeeEeecCCCCc-ee-------------------EcCCccHHHHHHHHHHhcCCCCC-------c---------
Q 044334          153 AVGLNTICNVYKSNSEST-TE-------------------ITGSPTEKAILSWAVFDLGMNRN-------N---------  196 (358)
Q Consensus       153 ~~~l~~t~t~~~~~~~~~-~~-------------------~~g~~~e~all~~a~~~~~~~~~-------~---------  196 (358)
                      .+++|||||+|+++..-. ..                   ..-+|...+++++++...+.+..       .         
T Consensus       300 ~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~  379 (679)
T PRK01122        300 TLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTR  379 (679)
T ss_pred             EEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCc
Confidence            789999999999642100 00                   11257778899888721332110       0         


Q ss_pred             --------------------------------------hHHHhccCceEEEEeecccc----------------------
Q 044334          197 --------------------------------------TDVAAKSLRCMAFARTKVAE----------------------  216 (358)
Q Consensus       197 --------------------------------------~~~a~~G~rvl~~a~~~~~~----------------------  216 (358)
                                                            ++++++|.|+++++++....                      
T Consensus       380 ~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~  459 (679)
T PRK01122        380 MSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRK  459 (679)
T ss_pred             eEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHH
Confidence                                                  23567899999999763321                      


Q ss_pred             -C-CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCch
Q 044334          217 -A-DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGT  294 (358)
Q Consensus       217 -~-~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~  294 (358)
                       + +..|+|||+..  ++.++++.++..++++|++||||.++|+.+|++|+.|+|+|||+||+|||++|||||+|| +|+
T Consensus       460 ~GI~vvMiTGDn~~--TA~aIA~elGId~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGT  536 (679)
T PRK01122        460 MGIKTVMITGDNPL--TAAAIAAEAGVDDFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGT  536 (679)
T ss_pred             CCCeEEEECCCCHH--HHHHHHHHcCCcEEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCC
Confidence             3 78999999966  788999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             HHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          295 KWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLT  336 (358)
Q Consensus       295 ~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~  336 (358)
                      ++||++||+++++|||..|++++++||++.-+--..-.|++.
T Consensus       537 dvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~  578 (679)
T PRK01122        537 QAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA  578 (679)
T ss_pred             HHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence            999999999999999999999999999998544444455554

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=100.00  E-value=1.3e-52  Score=444.38  Aligned_cols=336  Identities=27%  Similarity=0.394  Sum_probs=271.2

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEE
Q 044334           15 PKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLF   70 (358)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~v   70 (358)
                      ...+|+|+++|+++++++..++.++++|+++.+++|.++. ++++|                       +||+|||||+|
T Consensus        32 ~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~l  111 (917)
T TIGR01116        32 TVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRV  111 (917)
T ss_pred             ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEE
Confidence            3468999999999999999999999999999999999876 55665                       89999999999


Q ss_pred             EeeCceEEecCCCcCCCcceeeecC------------CceEEE------------Eeeecccccch--------------
Q 044334           71 LNGHSLKVDECSMTGETDRWLWLRA------------RHFCWN------------EHCLGTRDEMG--------------  112 (358)
Q Consensus        71 l~g~~~~vDes~lTGEs~Pv~k~~~------------~~~~~~------------V~~~G~~T~~g--------------  112 (358)
                      ++|+++.||||+|||||.|+.|.++            ++++++            |++||.+|.+|              
T Consensus       112 l~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t  191 (917)
T TIGR01116       112 LSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDT  191 (917)
T ss_pred             EEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCC
Confidence            9996699999999999999999764            134443            99999999999              


Q ss_pred             -----h----------------HHhhhc---cc---ccc----hHHHHHHHHHHHHHhhcCCchhHHH------------
Q 044334          113 -----N----------------REFLGT---NT---KVD----DVIYIIAAAVTIIVVAIPEGLPLAL------------  149 (358)
Q Consensus       113 -----~----------------~~~~~~---~~---~~~----~~~~~~~~~~~~lv~a~P~~L~la~------------  149 (358)
                           +                ..|...   +.   .+.    .+...+..++++++++|||+||+++            
T Consensus       192 ~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~  271 (917)
T TIGR01116       192 PLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA  271 (917)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHH
Confidence                 0                001100   00   011    2234556788999999999999988            


Q ss_pred             ----------------HHHHHhhCceeeEeecCC--------C------------C------------------------
Q 044334          150 ----------------LQEAVGLNTICNVYKSNS--------E------------S------------------------  169 (358)
Q Consensus       150 ----------------~~~~~~l~~t~t~~~~~~--------~------------~------------------------  169 (358)
                                      .++.+|+|||||+|+++.        +            +                        
T Consensus       272 ~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (917)
T TIGR01116       272 KKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGL  351 (917)
T ss_pred             HCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHH
Confidence                            467789999999998620        0            0                        


Q ss_pred             ----------------------ceeEcCCccHHHHHHHHHHhcCCCC-------------------------------Cc
Q 044334          170 ----------------------TTEITGSPTEKAILSWAVFDLGMNR-------------------------------NN  196 (358)
Q Consensus       170 ----------------------~~~~~g~~~e~all~~a~~~~~~~~-------------------------------~~  196 (358)
                                            .+...|||+|.|++++++ +.+.+.                               +.
T Consensus       352 ~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s  430 (917)
T TIGR01116       352 EELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSR  430 (917)
T ss_pred             HHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccCh
Confidence                                  011258999999999987 655320                               00


Q ss_pred             -------------------------------------------------------hHHHh-ccCceEEEEeeccc-----
Q 044334          197 -------------------------------------------------------TDVAA-KSLRCMAFARTKVA-----  215 (358)
Q Consensus       197 -------------------------------------------------------~~~a~-~G~rvl~~a~~~~~-----  215 (358)
                                                                             +++++ +|+||+++||+.++     
T Consensus       431 ~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~  510 (917)
T TIGR01116       431 DRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE  510 (917)
T ss_pred             hhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc
Confidence                                                                   34677 99999999998751     


Q ss_pred             ------------c-----------------------------C-Cceeeecccccccchhhhhhc---------------
Q 044334          216 ------------E-----------------------------A-DDEVIEGVQFRNLSAEEGVAK---------------  238 (358)
Q Consensus       216 ------------~-----------------------------~-~~~~ltGd~~~~~~~~~~~~~---------------  238 (358)
                                  +                             + +..|+|||+..  ++.++++.               
T Consensus       511 ~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~--tA~~ia~~~gi~~~~~~v~~~~~  588 (917)
T TIGR01116       511 DLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKE--TAEAICRRIGIFSPDEDVTFKSF  588 (917)
T ss_pred             cccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHH--HHHHHHHHcCCCCCCccccceee
Confidence                        1                             2 66788888754  22233333               


Q ss_pred             ----------------cccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCC
Q 044334          239 ----------------IENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD  302 (358)
Q Consensus       239 ----------------~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~ad  302 (358)
                                      .....||+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.|||||+|| +|++.++++||
T Consensus       589 ~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD  667 (917)
T TIGR01116       589 TGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASD  667 (917)
T ss_pred             eHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcC
Confidence                            3334699999999999999999999999999999999999999999999999 99999999999


Q ss_pred             EEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          303 IIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       303 iil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      +++.+|+|..|.+++++||++++|+++++.|.++.|+..+++.+++.+++++
T Consensus       668 ~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~  719 (917)
T TIGR01116       668 MVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIP  719 (917)
T ss_pred             eEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999998888887666554

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=100.00  E-value=3.6e-51  Score=413.30  Aligned_cols=327  Identities=24%  Similarity=0.307  Sum_probs=265.8

Q ss_pred             CcchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-cee------------------------CCCccCCCEEE
Q 044334           17 EGWFDGDG-VISAVLVVVIVSAVSNFKQSRQFQALANESSD-IRV------------------------TGDQIPADGLF   70 (358)
Q Consensus        17 ~~~~~~~~-i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~V------------------------~G~~IPaDg~v   70 (358)
                      ..|||++. ++++++++.+++.+.+.|+++.+++|.++.|+ +++                        |||+|||||+|
T Consensus        51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v  130 (562)
T TIGR01511        51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTV  130 (562)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEE
Confidence            35666555 56666677799999999999999999887642 222                        99999999999


Q ss_pred             EeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch-------------------hHHhhhcc
Q 044334           71 LNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-------------------NREFLGTN  120 (358)
Q Consensus        71 l~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-------------------~~~~~~~~  120 (358)
                      ++| ++.||||+|||||+|+.|++||.+++|           |+++|.+|.+|                   ...+..++
T Consensus       131 ~~g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~  209 (562)
T TIGR01511       131 IEG-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYF  209 (562)
T ss_pred             EEC-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence            999 689999999999999999999998888           99999999999                   11222111


Q ss_pred             cc---------cchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhCceeeEe
Q 044334          121 TK---------VDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLNTICNVY  163 (358)
Q Consensus       121 ~~---------~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~~t~t~~  163 (358)
                      ..         ..-|..++.+++++++++|||+|++++                            .++.+++|||||+|
T Consensus       210 ~~~v~~~a~~~~~~~~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT  289 (562)
T TIGR01511       210 VPVVIAIALITFVIWLFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLT  289 (562)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCc
Confidence            10         012456888999999999999999988                            36678999999999


Q ss_pred             ecCCCCc--------------------eeEcCCccHHHHHHHHHHhcCCCCCc--------------------------h
Q 044334          164 KSNSEST--------------------TEITGSPTEKAILSWAVFDLGMNRNN--------------------------T  197 (358)
Q Consensus       164 ~~~~~~~--------------------~~~~g~~~e~all~~a~~~~~~~~~~--------------------------~  197 (358)
                      +++..-.                    .....||.+.|++++++ +.+.+...                          +
T Consensus       290 ~g~~~v~~i~~~~~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~-~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~  368 (562)
T TIGR01511       290 QGKPTVTDVHVFGDRDRTELLALAAALEAGSEHPLAKAIVSYAK-EKGITLVEVSDFKAIPGIGVEGTVEGTKIQLGNEK  368 (562)
T ss_pred             CCCEEEEEEecCCCCCHHHHHHHHHHHhccCCChHHHHHHHHHH-hcCCCcCCCCCeEEECCceEEEEECCEEEEEECHH
Confidence            8742100                    01224788999999887 55533211                          1


Q ss_pred             ----------HHHhccCceEEEEeecccc-----------------------C-Cceeeecccccccchhhhhhccccce
Q 044334          198 ----------DVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNLSAEEGVAKIENIR  243 (358)
Q Consensus       198 ----------~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~~~~~~~~~~~~~~  243 (358)
                                ...++|.+++.++.+....                       + +..++|||+..  ..+.+.+.++.. 
T Consensus       369 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~--~a~~ia~~lgi~-  445 (562)
T TIGR01511       369 LLGENAIKIDGKAEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRK--TAKAVAKELGIN-  445 (562)
T ss_pred             HHHhCCCCCChhhhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHH--HHHHHHHHcCCc-
Confidence                      2345678888777654321                       2 67899999966  566778877775 


Q ss_pred             eeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHH
Q 044334          244 VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCV  323 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~  323 (358)
                      +++++.|++|.++++.++++++.|+|+|||.||++|++.||+||+|| .+++.+++.||++++++++..++++++++|++
T Consensus       446 ~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~  524 (562)
T TIGR01511       446 VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKT  524 (562)
T ss_pred             EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999 89999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          324 NNNIQKCLQFQLTVNFAALIVNIFAA  349 (358)
Q Consensus       324 ~~~i~~~i~~~~~~n~~~~~~~~~g~  349 (358)
                      +++++||+.|++.||++.+++++.|+
T Consensus       525 ~~~i~qn~~~a~~~n~~~i~la~~~~  550 (562)
T TIGR01511       525 LRRIKQNLLWAFGYNVIAIPIAAGVL  550 (562)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999998544

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=100.00  E-value=3.4e-51  Score=411.90  Aligned_cols=331  Identities=21%  Similarity=0.282  Sum_probs=276.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEee
Q 044334           18 GWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLNG   73 (358)
Q Consensus        18 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~g   73 (358)
                      +|+|+++++++++++.+++.++++|+++.+++|.++. ++++|                       +||+|||||+|++|
T Consensus        17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g   96 (536)
T TIGR01512        17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSG   96 (536)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeC
Confidence            6999999999999999999999999999999999866 44444                       99999999999999


Q ss_pred             CceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch------------------------------
Q 044334           74 HSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG------------------------------  112 (358)
Q Consensus        74 ~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g------------------------------  112 (358)
                       ++.||||+|||||.|+.|++|+.+++|           |+++|.+|.+|                              
T Consensus        97 -~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (536)
T TIGR01512        97 -TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV  175 (536)
T ss_pred             -cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH
Confidence             789999999999999999999988887           99999999999                              


Q ss_pred             -----hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhCce
Q 044334          113 -----NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLNTI  159 (358)
Q Consensus       113 -----~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~~t  159 (358)
                           +..|..++... .+..++.+++++++++|||+|++++                            -++.+++|||
T Consensus       176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKT  254 (536)
T TIGR01512       176 VLAIALAIWLVPGLLK-RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKT  254 (536)
T ss_pred             HHHHHHHHHHHHHHhc-ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCC
Confidence                 01111111111 2233778899999999999999887                            3667899999


Q ss_pred             eeEeecCCCCc--------------eeEcCCccHHHHHHHHHHhcCCCCCc-----------------------h-----
Q 044334          160 CNVYKSNSEST--------------TEITGSPTEKAILSWAVFDLGMNRNN-----------------------T-----  197 (358)
Q Consensus       160 ~t~~~~~~~~~--------------~~~~g~~~e~all~~a~~~~~~~~~~-----------------------~-----  197 (358)
                      ||+|+++..-.              .....||.+.|++++++ +.+ +...                       +     
T Consensus       255 GTLT~~~~~v~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~-~~~-~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~  332 (536)
T TIGR01512       255 GTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAIVDYAR-KRE-NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAA  332 (536)
T ss_pred             CCCcCCceEEEEeeHHHHHHHHHHHhccCCCcHHHHHHHHHH-hcC-CCcceEEecCCeEEEEECCeEEEEcCHHHHhhc
Confidence            99998742210              11346899999999987 543 1111                       1     


Q ss_pred             ---HHHhccCceEEEEeecccc-----------------------C--CceeeecccccccchhhhhhccccceeeecCC
Q 044334          198 ---DVAAKSLRCMAFARTKVAE-----------------------A--DDEVIEGVQFRNLSAEEGVAKIENIRVTARSS  249 (358)
Q Consensus       198 ---~~a~~G~rvl~~a~~~~~~-----------------------~--~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~  249 (358)
                         .+..+|.+++.++.+....                       +  +..++|||+..  ..+.+.+.++..++|++..
T Consensus       333 ~~~~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~--~a~~i~~~lgi~~~f~~~~  410 (536)
T TIGR01512       333 VGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRA--VAERVARELGIDEVHAELL  410 (536)
T ss_pred             CCcchhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHH--HHHHHHHHcCChhhhhccC
Confidence               2345677777766543221                       1  45799999966  6678889999999999999


Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQK  329 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~  329 (358)
                      |++|.++++.++++++.|+|+|||.||++|++.||+|+++|.++++.+++.||+++.++++..+.++++++|++++++++
T Consensus       411 p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~  490 (536)
T TIGR01512       411 PEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ  490 (536)
T ss_pred             cHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999668999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          330 CLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       330 ~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      |+.|++.||++.++++++|+++||-
T Consensus       491 nl~~a~~~n~~~i~~a~~G~~~p~~  515 (536)
T TIGR01512       491 NVVIALGIILLLILLALFGVLPLWL  515 (536)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHH
Confidence            9999999999999999999999974

.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=100.00  E-value=3.5e-51  Score=438.84  Aligned_cols=333  Identities=19%  Similarity=0.234  Sum_probs=263.3

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcee-------------------------CCCccCCCEEE
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRV-------------------------TGDQIPADGLF   70 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~V-------------------------~G~~IPaDg~v   70 (358)
                      .+.|+++++++++++++..++.++++|+.++++++....++++|                         +||+|||||+|
T Consensus       190 ~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~l  269 (1054)
T TIGR01657       190 DEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVL  269 (1054)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEE
Confidence            35789999999999999999999999999999888654445554                         38999999999


Q ss_pred             EeeCceEEecCCCcCCCcceeeecC------C-----------ceEEE-------------------Eeeecccccch--
Q 044334           71 LNGHSLKVDECSMTGETDRWLWLRA------R-----------HFCWN-------------------EHCLGTRDEMG--  112 (358)
Q Consensus        71 l~g~~~~vDes~lTGEs~Pv~k~~~------~-----------~~~~~-------------------V~~~G~~T~~g--  112 (358)
                      ++| ++.||||+|||||.||.|.+.      +           +++++                   |++||.+|.+|  
T Consensus       270 l~g-~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i  348 (1054)
T TIGR01657       270 LSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQL  348 (1054)
T ss_pred             EeC-cEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHH
Confidence            999 799999999999999999752      1           12222                   88999999999  


Q ss_pred             ---------------------------------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------
Q 044334          113 ---------------------------------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------  149 (358)
Q Consensus       113 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------  149 (358)
                                                       +..|......+.++...++.++++++++|||+||+++          
T Consensus       349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~r  428 (1054)
T TIGR01657       349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLAR  428 (1054)
T ss_pred             HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHH
Confidence                                             0011112223457888999999999999999999998          


Q ss_pred             ------------------HHHHHhhCceeeEeecCCC----------Cc------------------------------e
Q 044334          150 ------------------LQEAVGLNTICNVYKSNSE----------ST------------------------------T  171 (358)
Q Consensus       150 ------------------~~~~~~l~~t~t~~~~~~~----------~~------------------------------~  171 (358)
                                        .++.+|+|||||+|+++-.          ..                              .
T Consensus       429 L~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~  508 (1054)
T TIGR01657       429 LKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEG  508 (1054)
T ss_pred             HHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECC
Confidence                              5778999999999987310          00                              0


Q ss_pred             eEcCCccHHHHHHHHHHhcCC-C-----------------CCc-------------------------------------
Q 044334          172 EITGSPTEKAILSWAVFDLGM-N-----------------RNN-------------------------------------  196 (358)
Q Consensus       172 ~~~g~~~e~all~~a~~~~~~-~-----------------~~~-------------------------------------  196 (358)
                      ...|||+|.|+++++.+.... +                 ...                                     
T Consensus       509 ~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE  588 (1054)
T TIGR01657       509 KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPE  588 (1054)
T ss_pred             EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHH
Confidence            356999999999986422111 0                 000                                     


Q ss_pred             -------------------hHHHhccCceEEEEeecccc-----------------------------------------
Q 044334          197 -------------------TDVAAKSLRCMAFARTKVAE-----------------------------------------  216 (358)
Q Consensus       197 -------------------~~~a~~G~rvl~~a~~~~~~-----------------------------------------  216 (358)
                                         ++++++|+||+++||++++.                                         
T Consensus       589 ~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l  668 (1054)
T TIGR01657       589 TIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKEL  668 (1054)
T ss_pred             HHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHH
Confidence                               57889999999999997530                                         


Q ss_pred             ---C-Cceeeecccccc---------------------------------------------------------------
Q 044334          217 ---A-DDEVIEGVQFRN---------------------------------------------------------------  229 (358)
Q Consensus       217 ---~-~~~~ltGd~~~~---------------------------------------------------------------  229 (358)
                         + +..|+|||+...                                                               
T Consensus       669 ~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  748 (1054)
T TIGR01657       669 KRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLL  748 (1054)
T ss_pred             HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhc
Confidence               2 667777776420                                                               


Q ss_pred             ------------------cchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC
Q 044334          230 ------------------LSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI  291 (358)
Q Consensus       230 ------------------~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~  291 (358)
                                        ...+++.+.+....||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||| 
T Consensus       749 ~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-  827 (1054)
T TIGR01657       749 ASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-  827 (1054)
T ss_pred             ccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-
Confidence                              0112333445556799999999999999999999999999999999999999999999998 


Q ss_pred             CchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 044334          292 EGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQK  352 (358)
Q Consensus       292 ~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~  352 (358)
                      ++ ++ ..+||+++.+++++++++++++||+++.++++.++|.+.|++......++.++.+
T Consensus       828 ~~-da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~  886 (1054)
T TIGR01657       828 EA-EA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIG  886 (1054)
T ss_pred             cc-cc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            33 44 4899999999999999999999999999999999999999998876665555444

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=100.00  E-value=5.4e-51  Score=429.77  Aligned_cols=330  Identities=21%  Similarity=0.244  Sum_probs=272.1

Q ss_pred             Ccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-cee-----------------------CCCccCCCEEEE
Q 044334           17 EGWFD-GDGVISAVLVVVIVSAVSNFKQSRQFQALANESSD-IRV-----------------------TGDQIPADGLFL   71 (358)
Q Consensus        17 ~~~~~-~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~V-----------------------~G~~IPaDg~vl   71 (358)
                      ..||| ++.++++++++.+++.+.+.|+++.+++|.++.|+ +++                       |||+||+||+|+
T Consensus       283 ~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~  362 (834)
T PRK10671        283 HLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT  362 (834)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence            34777 56778888899999999999999999999988743 333                       999999999999


Q ss_pred             eeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch-------------------h--------
Q 044334           72 NGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-------------------N--------  113 (358)
Q Consensus        72 ~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-------------------~--------  113 (358)
                      +| ++.||||+|||||+||.|.+||.+++|           |+++|.+|.++                   .        
T Consensus       363 ~g-~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v  441 (834)
T PRK10671        363 QG-EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFV  441 (834)
T ss_pred             Ec-eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence            99 789999999999999999999998887           99999999999                   0        


Q ss_pred             --------HHhhhcccccc--hHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHh
Q 044334          114 --------REFLGTNTKVD--DVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVG  155 (358)
Q Consensus       114 --------~~~~~~~~~~~--~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~  155 (358)
                              ..+..|++.+.  .+...+..++++++++|||||++++                            -++.++
T Consensus       442 ~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~  521 (834)
T PRK10671        442 PVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLV  521 (834)
T ss_pred             HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEE
Confidence                    11111121111  2456778899999999999999998                            366789


Q ss_pred             hCceeeEeecCCCCc-e-------------------eEcCCccHHHHHHHHHHhcCCCCC-c------------------
Q 044334          156 LNTICNVYKSNSEST-T-------------------EITGSPTEKAILSWAVFDLGMNRN-N------------------  196 (358)
Q Consensus       156 l~~t~t~~~~~~~~~-~-------------------~~~g~~~e~all~~a~~~~~~~~~-~------------------  196 (358)
                      +|||||+|+++..-. .                   ....||.+.|+++++. ....... .                  
T Consensus       522 fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~-~~~~~~~~~~~~~~g~Gv~~~~~g~~~  600 (834)
T PRK10671        522 FDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQGSSHPLARAILDKAG-DMTLPQVNGFRTLRGLGVSGEAEGHAL  600 (834)
T ss_pred             EcCCCccccCceEEEEEEccCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHh-hCCCCCcccceEecceEEEEEECCEEE
Confidence            999999998742100 0                   1134888889888765 3321100 0                  


Q ss_pred             ----------------------hHHHhccCceEEEEeecccc-----------------------C-Cceeeeccccccc
Q 044334          197 ----------------------TDVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNL  230 (358)
Q Consensus       197 ----------------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~  230 (358)
                                            +.++++|.+++.++++....                       + +..++|||+..  
T Consensus       601 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~--  678 (834)
T PRK10671        601 LLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPT--  678 (834)
T ss_pred             EEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHH--
Confidence                                  23456899999988765421                       2 67899999976  


Q ss_pred             chhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCc
Q 044334          231 SAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNF  310 (358)
Q Consensus       231 ~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~  310 (358)
                      ..+.+.+.++...+++++.|++|.++++.++.+++.|+|+|||.||+||++.||+||+|| ++++.++++||++++++++
T Consensus       679 ~a~~ia~~lgi~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~  757 (834)
T PRK10671        679 TANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSL  757 (834)
T ss_pred             HHHHHHHHcCCCEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCH
Confidence            566788889999999999999999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 044334          311 TSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQK  352 (358)
Q Consensus       311 ~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~  352 (358)
                      ..|+++++++|+++++|++|+.|++.||++++++++ |.+.|
T Consensus       758 ~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~-g~~~p  798 (834)
T PRK10671        758 MGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA-GILWP  798 (834)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhh
Confidence            999999999999999999999999999999999997 44433

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=100.00  E-value=4.9e-50  Score=405.77  Aligned_cols=319  Identities=22%  Similarity=0.238  Sum_probs=254.5

Q ss_pred             cchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--cee------------------------CCCccCCCE
Q 044334           18 GWFDG---DGVISAVLVVVIVSAVSNFKQSRQFQALANESSD--IRV------------------------TGDQIPADG   68 (358)
Q Consensus        18 ~~~~~---~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~--~~V------------------------~G~~IPaDg   68 (358)
                      .|+++   +.+++.++++.+++.++++|+++++++|+++.++  ++|                        +||+||+||
T Consensus        63 ~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG  142 (675)
T TIGR01497        63 ALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDG  142 (675)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeE
Confidence            58875   4456667888899999999999999999987633  222                        999999999


Q ss_pred             EEEeeCceEEecCCCcCCCcceeeecCCc---eEEE-----------Eeeecccccch-------------------h--
Q 044334           69 LFLNGHSLKVDECSMTGETDRWLWLRARH---FCWN-----------EHCLGTRDEMG-------------------N--  113 (358)
Q Consensus        69 ~vl~g~~~~vDes~lTGEs~Pv~k~~~~~---~~~~-----------V~~~G~~T~~g-------------------~--  113 (358)
                      +|++| ++.||||+|||||.||.|++|+.   +++|           |+++|.+|++|                   +  
T Consensus       143 ~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~  221 (675)
T TIGR01497       143 EVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTI  221 (675)
T ss_pred             EEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHH
Confidence            99999 79999999999999999998874   4444           99999999999                   0  


Q ss_pred             -----------HHhhhcccc-cchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHH
Q 044334          114 -----------REFLGTNTK-VDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEA  153 (358)
Q Consensus       114 -----------~~~~~~~~~-~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~  153 (358)
                                 ..+..+.+. .......+..++++++++|||+|+...                            -.+.
T Consensus       222 l~~~l~~v~li~~~~~~~~~~~~~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~  301 (675)
T TIGR01497       222 LLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDT  301 (675)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCE
Confidence                       000000000 001123567789999999999665433                            3567


Q ss_pred             HhhCceeeEeecCCCCc-e-------------------eEcCCccHHHHHHHHHHhcCCCCC-------c----------
Q 044334          154 VGLNTICNVYKSNSEST-T-------------------EITGSPTEKAILSWAVFDLGMNRN-------N----------  196 (358)
Q Consensus       154 ~~l~~t~t~~~~~~~~~-~-------------------~~~g~~~e~all~~a~~~~~~~~~-------~----------  196 (358)
                      +++|||||+|+++..-. .                   ....+|.+.+++++++ +.+.+..       .          
T Consensus       302 I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~s~hP~a~Aiv~~a~-~~~~~~~~~~~~~~~~~pf~~~~~~  380 (675)
T TIGR01497       302 LLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLADDTPEGKSIVILAK-QLGIREDDVQSLHATFVEFTAQTRM  380 (675)
T ss_pred             EEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCCCCCcHHHHHHHHHH-HcCCCccccccccceEEEEcCCCcE
Confidence            89999999998742100 0                   0123688889999987 5554310       0          


Q ss_pred             --------------------------------------hHHHhccCceEEEEeecccc----------------------
Q 044334          197 --------------------------------------TDVAAKSLRCMAFARTKVAE----------------------  216 (358)
Q Consensus       197 --------------------------------------~~~a~~G~rvl~~a~~~~~~----------------------  216 (358)
                                                            ++++++|.|+++++++....                      
T Consensus       381 sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~  460 (675)
T TIGR01497       381 SGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRK  460 (675)
T ss_pred             EEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHH
Confidence                                                  23567899999999874321                      


Q ss_pred             -C-CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCch
Q 044334          217 -A-DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGT  294 (358)
Q Consensus       217 -~-~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~  294 (358)
                       + +..|+|||+..  +...+++.++..+++++++|+||.++++.+|++|+.|+|+|||.||+|||++|||||+|+ +|+
T Consensus       461 ~Gi~v~miTGD~~~--ta~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt  537 (675)
T TIGR01497       461 MGIKTIMITGDNRL--TAAAIAAEAGVDDFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGT  537 (675)
T ss_pred             CCCEEEEEcCCCHH--HHHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCC
Confidence             3 78999999966  778999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             HHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          295 KWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAA  341 (358)
Q Consensus       295 ~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~  341 (358)
                      +.++++||+++++|||++|++++++||+++-+......|++..++.-
T Consensus       538 ~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~  584 (675)
T TIGR01497       538 QAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK  584 (675)
T ss_pred             HHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence            99999999999999999999999999999988888888888665544

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=100.00  E-value=2.9e-49  Score=400.07  Aligned_cols=330  Identities=24%  Similarity=0.283  Sum_probs=277.0

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-cee------------------------CCCccCCCEEEE
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSD-IRV------------------------TGDQIPADGLFL   71 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~V------------------------~G~~IPaDg~vl   71 (358)
                      +.|.++++++++++++.+++.++++|+++.+++|.+..+. ++|                        +||+|||||+|+
T Consensus        16 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi   95 (556)
T TIGR01525        16 GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI   95 (556)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence            3688999999999999999999999999999999876632 332                        999999999999


Q ss_pred             eeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch-------------------hHHhhhc--
Q 044334           72 NGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-------------------NREFLGT--  119 (358)
Q Consensus        72 ~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-------------------~~~~~~~--  119 (358)
                      +| ++.||||+|||||.|+.|++|+.++.|           |+++|.+|++|                   ...+..+  
T Consensus        96 ~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~  174 (556)
T TIGR01525        96 SG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV  174 (556)
T ss_pred             ec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence            99 689999999999999999999988777           99999999999                   1111111  


Q ss_pred             --------------ccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhC
Q 044334          120 --------------NTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLN  157 (358)
Q Consensus       120 --------------~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~  157 (358)
                                    +..+.+  ..+..++++++++|||+|++++                            -++.+++|
T Consensus       175 ~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fD  252 (556)
T TIGR01525       175 PAVLAIALLTFVVWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFD  252 (556)
T ss_pred             HHHHHHHHHHHHHHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEe
Confidence                          111011  5788899999999999999988                            46678999


Q ss_pred             ceeeEeecCCC--------C----c---e-------eEcCCccHHHHHHHHHHhcCCCC--C-c----------------
Q 044334          158 TICNVYKSNSE--------S----T---T-------EITGSPTEKAILSWAVFDLGMNR--N-N----------------  196 (358)
Q Consensus       158 ~t~t~~~~~~~--------~----~---~-------~~~g~~~e~all~~a~~~~~~~~--~-~----------------  196 (358)
                      ||||+|+++..        +    .   +       ....||.+.|++++++ +.+.+.  . .                
T Consensus       253 KTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~-~~~~~~~~~~~~~~~~~~gi~~~~~g~  331 (556)
T TIGR01525       253 KTGTLTTGKPTVVDVEPLDDASISEEELLALAAALEQSSSHPLARAIVRYAK-KRGLELPKQEDVEEVPGKGVEATVDGQ  331 (556)
T ss_pred             CCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHhccCCChHHHHHHHHHH-hcCCCcccccCeeEecCCeEEEEECCe
Confidence            99999987411        0    0   0       1235899999999988 554321  1 1                


Q ss_pred             -------------------------hHHHhccCceEEEEeecccc-----------------------C--Cceeeeccc
Q 044334          197 -------------------------TDVAAKSLRCMAFARTKVAE-----------------------A--DDEVIEGVQ  226 (358)
Q Consensus       197 -------------------------~~~a~~G~rvl~~a~~~~~~-----------------------~--~~~~ltGd~  226 (358)
                                               ..+.++|+|++.++.+....                       +  +..++|||+
T Consensus       332 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~  411 (556)
T TIGR01525       332 EEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDN  411 (556)
T ss_pred             eEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCC
Confidence                                     12345788999988765322                       3  467999999


Q ss_pred             ccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEe
Q 044334          227 FRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIM  306 (358)
Q Consensus       227 ~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~  306 (358)
                      ..  ..+.+.+.++...+|+++.|++|.++++.+++.++.|+|+|||.||++|++.||+|+++| ++++.+++.||+++.
T Consensus       412 ~~--~a~~i~~~lgi~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~  488 (556)
T TIGR01525       412 RS--AAEAVAAELGIDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLL  488 (556)
T ss_pred             HH--HHHHHHHHhCCCeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEe
Confidence            76  566888889999999999999999999999998999999999999999999999999999 899999999999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044334          307 DDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKF  353 (358)
Q Consensus       307 ~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~  353 (358)
                      ++++..+++++++||++++++++|+.|+++||++.++++++|+++||
T Consensus       489 ~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~  535 (556)
T TIGR01525       489 NDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW  535 (556)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence            99999999999999999999999999999999999999999999996

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=100.00  E-value=4.5e-47  Score=380.06  Aligned_cols=313  Identities=27%  Similarity=0.381  Sum_probs=256.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCC-Cce--------e--------------CCCccCCCEEEEeeCceEEec
Q 044334           26 ISAVLVVVIVSAVSNFKQSRQFQALAN--ESS-DIR--------V--------------TGDQIPADGLFLNGHSLKVDE   80 (358)
Q Consensus        26 ~~~~~~~~~i~~~~~~~~~~~~~~l~~--~~~-~~~--------V--------------~G~~IPaDg~vl~g~~~~vDe   80 (358)
                      +++++++.+++.++++++++.+++|.+  +.+ .++        |              |||+|||||+|++| ++.|||
T Consensus         3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vde   81 (499)
T TIGR01494         3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNGWKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVDE   81 (499)
T ss_pred             EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECCeEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEEc
Confidence            456778888999999999999999987  332 222        1              99999999999999 899999


Q ss_pred             CCCcCCCcceeeecCCceEEE-----------Eeeecccccch-------------------hHHhh-------------
Q 044334           81 CSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-------------------NREFL-------------  117 (358)
Q Consensus        81 s~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-------------------~~~~~-------------  117 (358)
                      |+|||||.|+.|.+|+.+..+           |+++|.+|..+                   ...+.             
T Consensus        82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~  161 (499)
T TIGR01494        82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL  161 (499)
T ss_pred             ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998875554           88899888887                   11111             


Q ss_pred             ----hccccc-c--hHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhCceeeE
Q 044334          118 ----GTNTKV-D--DVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLNTICNV  162 (358)
Q Consensus       118 ----~~~~~~-~--~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~~t~t~  162 (358)
                          .+.... .  +|...+..++++++++|||+|++++                            .++.+++|||||+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTL  241 (499)
T TIGR01494       162 AVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTL  241 (499)
T ss_pred             HHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCcc
Confidence                011111 1  2677899999999999999999998                            4678999999999


Q ss_pred             eecCCC-------CceeEcCCccHHHHHHHHHHhcCCC-----CCc---------------------------------h
Q 044334          163 YKSNSE-------STTEITGSPTEKAILSWAVFDLGMN-----RNN---------------------------------T  197 (358)
Q Consensus       163 ~~~~~~-------~~~~~~g~~~e~all~~a~~~~~~~-----~~~---------------------------------~  197 (358)
                      |+++..       +.....+||.|.+++.+++ .....     ...                                 .
T Consensus       242 T~~~~~v~~~~~~~~~~~s~hp~~~ai~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~  320 (499)
T TIGR01494       242 TKNEMSFKKVSVLGGEYLSGHPDERALVKSAK-WKILNVFEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVK  320 (499)
T ss_pred             ccCceEEEEEEecCCCcCCCChHHHHHHHHhh-hcCcceeccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHH
Confidence            997522       1124567999999999987 32211     100                                 1


Q ss_pred             HHHhccCceEEEEeecccc-----------------------C-CceeeecccccccchhhhhhccccceeeecCChhhH
Q 044334          198 DVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDK  253 (358)
Q Consensus       198 ~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K  253 (358)
                      .++++|+|++++++++...                       + ...++|||+..  +...+++.++   ++++++|+||
T Consensus       321 ~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~--~a~~ia~~lg---i~~~~~p~~K  395 (499)
T TIGR01494       321 ELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVL--TAKAIAKELG---IFARVTPEEK  395 (499)
T ss_pred             HHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHH--HHHHHHHHcC---ceeccCHHHH
Confidence            2467899999999876432                       2 68899999976  6677888876   4899999999


Q ss_pred             HHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 044334          254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQF  333 (358)
Q Consensus       254 ~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~  333 (358)
                      .++|+.+|++|+.|+|+|||.||+|||++|||||+|+      ++++||++++++++..++.++++||++++++++|+.|
T Consensus       396 ~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~  469 (499)
T TIGR01494       396 AALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFW  469 (499)
T ss_pred             HHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999996      6899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 044334          334 QLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       334 ~~~~n~~~~~~~~~g~~~  351 (358)
                      .+.||++.+++++++.+.
T Consensus       470 ~~~~n~~~~~~a~~~~~~  487 (499)
T TIGR01494       470 AIAYNLILIPLAALLAVL  487 (499)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999987754

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=100.00  E-value=7.8e-48  Score=380.57  Aligned_cols=340  Identities=28%  Similarity=0.396  Sum_probs=277.8

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-cee-----------------------CCCccCCCEEEE
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSD-IRV-----------------------TGDQIPADGLFL   71 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~V-----------------------~G~~IPaDg~vl   71 (358)
                      ...-+-++++.+++++.+.+..+|+.+..+.+++.+.+.|. +.|                       -||+||||.+++
T Consensus       123 ~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRii  202 (1019)
T KOG0203|consen  123 DDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRII  202 (1019)
T ss_pred             CcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEE
Confidence            33444567777777777888999999999999988887743 444                       899999999999


Q ss_pred             eeCceEEecCCCcCCCcceeeecC----Cc------eEEE-----------Eeeecccccch------------------
Q 044334           72 NGHSLKVDECSMTGETDRWLWLRA----RH------FCWN-----------EHCLGTRDEMG------------------  112 (358)
Q Consensus        72 ~g~~~~vDes~lTGEs~Pv~k~~~----~~------~~~~-----------V~~~G~~T~~g------------------  112 (358)
                      ++..+.+|+|+|||||+|..+.+.    ++      .+++           |.+||++|.+|                  
T Consensus       203 s~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~  282 (1019)
T KOG0203|consen  203 SATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAK  282 (1019)
T ss_pred             EecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchh
Confidence            999999999999999999999842    21      1121           99999999999                  


Q ss_pred             -----------------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH--------------------------
Q 044334          113 -----------------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL--------------------------  149 (358)
Q Consensus       113 -----------------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~--------------------------  149 (358)
                                       +..|......+++|..++.+.+.+++..+|++|+..+                          
T Consensus       283 ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavet  362 (1019)
T KOG0203|consen  283 EIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET  362 (1019)
T ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheee
Confidence                             2334344445788999999999999999999999887                          


Q ss_pred             ------------------------------------------------------HHHHHhhCceeeEeecCCC---Ccee
Q 044334          150 ------------------------------------------------------LQEAVGLNTICNVYKSNSE---STTE  172 (358)
Q Consensus       150 ------------------------------------------------------~~~~~~l~~t~t~~~~~~~---~~~~  172 (358)
                                                                            +....++|+++++..++.+   -+..
T Consensus       363 lGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~  442 (1019)
T KOG0203|consen  363 LGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRD  442 (1019)
T ss_pred             cccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeee
Confidence                                                                  4555566666555544332   1345


Q ss_pred             EcCCccHHHHHHHHHHhcCCC--------------CCc------------------------------------------
Q 044334          173 ITGSPTEKAILSWAVFDLGMN--------------RNN------------------------------------------  196 (358)
Q Consensus       173 ~~g~~~e~all~~a~~~~~~~--------------~~~------------------------------------------  196 (358)
                      ..||++|.||+++++..++.-              ++.                                          
T Consensus       443 v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~  522 (1019)
T KOG0203|consen  443 VAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGE  522 (1019)
T ss_pred             ccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCC
Confidence            679999999999998333321              010                                          


Q ss_pred             ----------------hHHHhccCceEEEEeecccc--------------------------------------------
Q 044334          197 ----------------TDVAAKSLRCMAFARTKVAE--------------------------------------------  216 (358)
Q Consensus       197 ----------------~~~a~~G~rvl~~a~~~~~~--------------------------------------------  216 (358)
                                      .++...|-||+++++..++.                                            
T Consensus       523 e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~C  602 (1019)
T KOG0203|consen  523 EKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKC  602 (1019)
T ss_pred             CCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhh
Confidence                            45566777888777766653                                            


Q ss_pred             ---------------------------------------------------C--Cceeeecccccccchhhhhhccccce
Q 044334          217 ---------------------------------------------------A--DDEVIEGVQFRNLSAEEGVAKIENIR  243 (358)
Q Consensus       217 ---------------------------------------------------~--~~~~ltGd~~~~~~~~~~~~~~~~~~  243 (358)
                                                                         +  +..+++|+++..++.+++.+.+....
T Consensus       603 rsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~  682 (1019)
T KOG0203|consen  603 RSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQ  682 (1019)
T ss_pred             hhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCC
Confidence                                                               1  66889999999998888888876544


Q ss_pred             --eeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHH
Q 044334          244 --VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGR  321 (358)
Q Consensus       244 --v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r  321 (358)
                        ||||.||+||+.||+..|++|..|+++|||+||+||||.||+|||||..|+|++|++||+||+||||.+|+..+++||
T Consensus       683 eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGR  762 (1019)
T KOG0203|consen  683 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGR  762 (1019)
T ss_pred             ceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccce
Confidence              999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 044334          322 CVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFRN  355 (358)
Q Consensus       322 ~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~~  355 (358)
                      .+|.|+||.++|.++.|+.-+...++..++++|-
T Consensus       763 LiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPL  796 (1019)
T KOG0203|consen  763 LIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPL  796 (1019)
T ss_pred             ehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCc
Confidence            9999999999999999999999988888887663

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.5e-45  Score=355.32  Aligned_cols=327  Identities=23%  Similarity=0.309  Sum_probs=251.3

Q ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCE
Q 044334           13 LGPKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADG   68 (358)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg   68 (358)
                      .+.+.+|.|...|+.+++++..+++++|+.+.+...+|.+.. ++..|                       .||.|||||
T Consensus        91 ~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDa  170 (942)
T KOG0205|consen   91 GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADA  170 (942)
T ss_pred             CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcc
Confidence            345669999999999999999999999999999999997654 77777                       788999999


Q ss_pred             EEEeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch-hHHhhh------------------
Q 044334           69 LFLNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG-NREFLG------------------  118 (358)
Q Consensus        69 ~vl~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g-~~~~~~------------------  118 (358)
                      ++++|..+.||||.|||||.||.|++||+++.|           |++||.+|++| ..+++.                  
T Consensus       171 RLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~  250 (942)
T KOG0205|consen  171 RLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNF  250 (942)
T ss_pred             ceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhH
Confidence            999998899999999999999999999998887           99999999999 111111                  


Q ss_pred             ---------------cccccchHHHHHHHHHHHHHhh-cCCchhHHH----------------------------HHHHH
Q 044334          119 ---------------TNTKVDDVIYIIAAAVTIIVVA-IPEGLPLAL----------------------------LQEAV  154 (358)
Q Consensus       119 ---------------~~~~~~~~~~~~~~~~~~lv~a-~P~~L~la~----------------------------~~~~~  154 (358)
                                     .+.......+....-+.++++. +|.|||..+                            -++.+
T Consensus       251 ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVL  330 (942)
T KOG0205|consen  251 CICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL  330 (942)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEE
Confidence                           1111112223333444455555 899998766                            35678


Q ss_pred             hhCceeeEeecCCC---CceeE--cC-CccH------------------HHHHHHHHHhc-----C---CCC---Cc---
Q 044334          155 GLNTICNVYKSNSE---STTEI--TG-SPTE------------------KAILSWAVFDL-----G---MNR---NN---  196 (358)
Q Consensus       155 ~l~~t~t~~~~~~~---~~~~~--~g-~~~e------------------~all~~a~~~~-----~---~~~---~~---  196 (358)
                      |.|||||+|.++-.   +.+++  .| +|++                  .|++.... ..     +   .++   ++   
T Consensus       331 CSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~-dPKeara~ikevhF~PFnPV~K  409 (942)
T KOG0205|consen  331 CSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLA-DPKEARAGIKEVHFLPFNPVDK  409 (942)
T ss_pred             eecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhc-CHHHHhhCceEEeeccCCcccc
Confidence            99999999997421   11211  12 2222                  22222221 00     0   000   00   


Q ss_pred             ------------------------------------------hHHHhccCceEEEEeecccc------------------
Q 044334          197 ------------------------------------------TDVAAKSLRCMAFARTKVAE------------------  216 (358)
Q Consensus       197 ------------------------------------------~~~a~~G~rvl~~a~~~~~~------------------  216 (358)
                                                                ++++++|+|.+++|++..++                  
T Consensus       410 rta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~  489 (942)
T KOG0205|consen  410 RTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPL  489 (942)
T ss_pred             ceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccccc
Confidence                                                      78999999999999988654                  


Q ss_pred             ------------------C-Cceeeecccccc----------------------------cchhhhhhccccceeeecCC
Q 044334          217 ------------------A-DDEVIEGVQFRN----------------------------LSAEEGVAKIENIRVTARSS  249 (358)
Q Consensus       217 ------------------~-~~~~ltGd~~~~----------------------------~~~~~~~~~~~~~~v~a~~~  249 (358)
                                        + .+.|+|||.+.-                            +....+...+.+..=|+.+.
T Consensus       490 fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVf  569 (942)
T KOG0205|consen  490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVF  569 (942)
T ss_pred             CCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccC
Confidence                              2 678899988631                            11122334455566799999


Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQK  329 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~  329 (358)
                      |++|.++|+.||++||.|+|+|||+||+|||+.||+||+.. .++++|+.++|+|+..+.++.+..++..+|.+|++++.
T Consensus       570 pehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmkn  648 (942)
T KOG0205|consen  570 PEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN  648 (942)
T ss_pred             HHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 044334          330 CLQFQLTVNFAA  341 (358)
Q Consensus       330 ~i~~~~~~n~~~  341 (358)
                      +..|+++..+-.
T Consensus       649 ytiyavsitiri  660 (942)
T KOG0205|consen  649 YTIYAVSITIRI  660 (942)
T ss_pred             heeeeehhHHHH
Confidence            888887666553

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.7e-43  Score=350.79  Aligned_cols=328  Identities=19%  Similarity=0.223  Sum_probs=259.6

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcee---------------C---------CCccCCCEEE
Q 044334           15 PKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRV---------------T---------GDQIPADGLF   70 (358)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~V---------------~---------G~~IPaDg~v   70 (358)
                      .++.|+.++.|+++.+.+..++.++.++.++.++++.+....++|               |         |-..|||+++
T Consensus       210 ~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~L  289 (1140)
T KOG0208|consen  210 ADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALL  289 (1140)
T ss_pred             cccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEE
Confidence            455677788999999999999999999999999998877655555               4         4567999999


Q ss_pred             EeeCceEEecCCCcCCCcceeeec------------------------------------CCceEEEEeeecccccch--
Q 044334           71 LNGHSLKVDECSMTGETDRWLWLR------------------------------------ARHFCWNEHCLGTRDEMG--  112 (358)
Q Consensus        71 l~g~~~~vDes~lTGEs~Pv~k~~------------------------------------~~~~~~~V~~~G~~T~~g--  112 (358)
                      ++| ++.||||||||||.||.|.+                                    |.++++.|.|||++|..|  
T Consensus       290 i~g-~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqL  368 (1140)
T KOG0208|consen  290 ISG-DCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQL  368 (1140)
T ss_pred             EeC-cEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHH
Confidence            999 89999999999999999973                                    222333399999999999  


Q ss_pred             ---------------------------------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------
Q 044334          113 ---------------------------------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------  149 (358)
Q Consensus       113 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------  149 (358)
                                                       +.........+.+....++.++.++.+.+|+|||.++          
T Consensus       369 VRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~R  448 (1140)
T KOG0208|consen  369 VRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSR  448 (1140)
T ss_pred             HHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHH
Confidence                                             0111122345678889999999999999999999999          


Q ss_pred             ------------------HHHHHhhCceeeEeecCCC-------------C-----------------------------
Q 044334          150 ------------------LQEAVGLNTICNVYKSNSE-------------S-----------------------------  169 (358)
Q Consensus       150 ------------------~~~~~~l~~t~t~~~~~~~-------------~-----------------------------  169 (358)
                                        .++.+++|||||+|++.-+             +                             
T Consensus       449 Lkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  528 (1140)
T KOG0208|consen  449 LKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNL  528 (1140)
T ss_pred             HHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHH
Confidence                              5778999999999986200             0                             


Q ss_pred             -------------ceeEcCCccHHHHHHHHHHhcCCC---CCc-------------------------------------
Q 044334          170 -------------TTEITGSPTEKAILSWAVFDLGMN---RNN-------------------------------------  196 (358)
Q Consensus       170 -------------~~~~~g~~~e~all~~a~~~~~~~---~~~-------------------------------------  196 (358)
                                   .-.+.|||.|..+.+..++.+...   .+.                                     
T Consensus       529 ~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~fe  608 (1140)
T KOG0208|consen  529 VAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFE  608 (1140)
T ss_pred             HHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecc
Confidence                         013457887776666555433110   000                                     


Q ss_pred             ------------------------------------------------hHHHhccCceEEEEeecccc------------
Q 044334          197 ------------------------------------------------TDVAAKSLRCMAFARTKVAE------------  216 (358)
Q Consensus       197 ------------------------------------------------~~~a~~G~rvl~~a~~~~~~------------  216 (358)
                                                                      +.++.+|+|++++|+|.++.            
T Consensus       609 F~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd  688 (1140)
T KOG0208|consen  609 FSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRD  688 (1140)
T ss_pred             cchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHh
Confidence                                                            78899999999999998875            


Q ss_pred             --------------------------------------------------------------------------------
Q 044334          217 --------------------------------------------------------------------------------  216 (358)
Q Consensus       217 --------------------------------------------------------------------------------  216 (358)
                                                                                                      
T Consensus       689 ~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~  768 (1140)
T KOG0208|consen  689 TVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIV  768 (1140)
T ss_pred             hhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeE
Confidence                                                                                            


Q ss_pred             ---------------------------------CCceeeecccccccc---hhhhhhccccceeeecCChhhHHHHHHhh
Q 044334          217 ---------------------------------ADDEVIEGVQFRNLS---AEEGVAKIENIRVTARSSVPDKLLTVQSL  260 (358)
Q Consensus       217 ---------------------------------~~~~~ltGd~~~~~~---~~~~~~~~~~~~v~a~~~P~~K~~iv~~l  260 (358)
                                                       +....++|+.++.+.   .+.+.+.+.+..||||++|+||.++|+.|
T Consensus       769 w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~l  848 (1140)
T KOG0208|consen  769 WLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEAL  848 (1140)
T ss_pred             EEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHH
Confidence                                             123445555554332   24456667778899999999999999999


Q ss_pred             cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          261 KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFA  340 (358)
Q Consensus       261 ~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~  340 (358)
                      |+.|+.|+|+|||.||+.|||+|||||+++   ...|.-+|.+...-.++++++++|++||+.+-+-...++|...|.++
T Consensus       849 Qkl~y~VgfCGDGANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~i  925 (1140)
T KOG0208|consen  849 QKLGYKVGFCGDGANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAI  925 (1140)
T ss_pred             HhcCcEEEecCCCcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHH
Confidence            999999999999999999999999999998   45567799999998999999999999999999999999999999887


Q ss_pred             HHHHHH
Q 044334          341 ALIVNI  346 (358)
Q Consensus       341 ~~~~~~  346 (358)
                      .....+
T Consensus       926 qFisv~  931 (1140)
T KOG0208|consen  926 QFISVV  931 (1140)
T ss_pred             HHHhhh
Confidence            765543

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=100.00  E-value=6.8e-38  Score=337.08  Aligned_cols=106  Identities=24%  Similarity=0.250  Sum_probs=95.2

Q ss_pred             eeecCChhhHHHHHHhhcCC-CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHH-HHHH
Q 044334          244 VTARSSVPDKLLTVQSLKPK-GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQ-RWGR  321 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~-g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i-~~~r  321 (358)
                      ||||++|+||.++|+.+|+. |++|+|+|||.||+|||++|||||++.+.....|+.+||+++.+  |..+.+++ .+||
T Consensus       747 V~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR  824 (1057)
T TIGR01652       747 ICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGR  824 (1057)
T ss_pred             EEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCH
Confidence            99999999999999999998 99999999999999999999999987423333788999999975  99999987 7799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          322 CVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       322 ~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      .+++|+++.+.|.+..|++.+.+.+++.+.
T Consensus       825 ~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~  854 (1057)
T TIGR01652       825 WSYKRISKMILYFFYKNLIFAIIQFWYSFY  854 (1057)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999888777766554

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.3e-37  Score=290.24  Aligned_cols=293  Identities=24%  Similarity=0.265  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc------------ee--------------CCCccCCCEEEEeeCceEE
Q 044334           25 VISAVLVVVIVSAVSNFKQSRQFQALANESSDI------------RV--------------TGDQIPADGLFLNGHSLKV   78 (358)
Q Consensus        25 i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~------------~V--------------~G~~IPaDg~vl~g~~~~v   78 (358)
                      +++.+++..+.+++.|-|.+.+-++|++.+.+.            .|              .||.||+||.|++| .+.|
T Consensus        72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asV  150 (681)
T COG2216          72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASV  150 (681)
T ss_pred             HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeec
Confidence            334444555567777766665555555432111            11              99999999999999 7999


Q ss_pred             ecCCCcCCCcceeeecCCc---eEEE-----------Eeeecccccch-------------------h------------
Q 044334           79 DECSMTGETDRWLWLRARH---FCWN-----------EHCLGTRDEMG-------------------N------------  113 (358)
Q Consensus        79 Des~lTGEs~Pv~k~~~~~---~~~~-----------V~~~G~~T~~g-------------------~------------  113 (358)
                      |||.+||||.||.|+.|..   +..|           +++.-.+|++-                   +            
T Consensus       151 dESAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL  230 (681)
T COG2216         151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL  230 (681)
T ss_pred             chhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH
Confidence            9999999999999998733   3333           33333444443                   0            


Q ss_pred             ------HHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhCce
Q 044334          114 ------REFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLNTI  159 (358)
Q Consensus       114 ------~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~~t  159 (358)
                            ..|..+.. +..  ..+..-++++++-+|--++--+                            -++.+.+|||
T Consensus       231 ~~~~Tl~p~a~y~~-g~~--~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKT  307 (681)
T COG2216         231 LAVATLYPFAIYSG-GGA--ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKT  307 (681)
T ss_pred             HHHHhhhhHHHHcC-CCC--cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEeccc
Confidence                  00111110 000  1223345566666776554333                            3677899999


Q ss_pred             eeEeecCCC-CceeEcC-------------------CccHHHHHHHHHHhcCCCCCc-----------------------
Q 044334          160 CNVYKSNSE-STTEITG-------------------SPTEKAILSWAVFDLGMNRNN-----------------------  196 (358)
Q Consensus       160 ~t~~~~~~~-~~~~~~g-------------------~~~e~all~~a~~~~~~~~~~-----------------------  196 (358)
                      ||+|.++-. .......                   .|.-..++..++ +.+.+.+.                       
T Consensus       308 GTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~DeTpEGrSIV~LA~-~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~  386 (681)
T COG2216         308 GTITLGNRQASEFIPVPGVSEEELADAAQLASLADETPEGRSIVELAK-KLGIELREDDLQSHAEFVPFTAQTRMSGVDL  386 (681)
T ss_pred             CceeecchhhhheecCCCCCHHHHHHHHHHhhhccCCCCcccHHHHHH-HhccCCCcccccccceeeecceecccccccC
Confidence            999987321 1111111                   233344555555 43322111                       


Q ss_pred             ---------------------------------hHHHhccCceEEEEeecccc-----------------------C-Cc
Q 044334          197 ---------------------------------TDVAAKSLRCMAFARTKVAE-----------------------A-DD  219 (358)
Q Consensus       197 ---------------------------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~  219 (358)
                                                       ++.++.|-+.|.++.++.--                       + +.
T Consensus       387 ~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkT  466 (681)
T COG2216         387 PGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKT  466 (681)
T ss_pred             CCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeE
Confidence                                             56667777777766544321                       3 78


Q ss_pred             eeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHh
Q 044334          220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKE  299 (358)
Q Consensus       220 ~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~  299 (358)
                      +|+|||+  .+++..++++.+.+.+.|+++||+|.++|+.-|.+|+.|+|+|||.||+|||++||||++|+ +|+.+|||
T Consensus       467 vM~TGDN--~~TAa~IA~EAGVDdfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkE  543 (681)
T COG2216         467 VMITGDN--PLTAAAIAAEAGVDDFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKE  543 (681)
T ss_pred             EEEeCCC--HHHHHHHHHHhCchhhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHH
Confidence            9999999  45888999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             cCCEEEeCCCcchHHHHHHHHHHHHH
Q 044334          300 GSDIIIMDDNFTSVVTDQRWGRCVNN  325 (358)
Q Consensus       300 ~adiil~~~~~~~i~~~i~~~r~~~~  325 (358)
                      +++.|=+|+|...+.+++..|+...-
T Consensus       544 AaNMVDLDS~PTKlievV~IGKqlLi  569 (681)
T COG2216         544 AANMVDLDSNPTKLIEVVEIGKQLLI  569 (681)
T ss_pred             hhcccccCCCccceehHhhhhhhhee
Confidence            99999999999999999999998653

>PLN03190 aminophospholipid translocase; Provisional

Probab=100.00  E-value=1.5e-34  Score=309.99  Aligned_cols=111  Identities=19%  Similarity=0.202  Sum_probs=97.2

Q ss_pred             eeecCChhhHHHHHHhhcCC-CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH-HHH
Q 044334          244 VTARSSVPDKLLTVQSLKPK-GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR-WGR  321 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~-g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~-~~r  321 (358)
                      ||||++|+||.++|+.+|+. +++|+|+|||.||++||++|||||++.+....+|..+||+.+.+  |..+.+++. +||
T Consensus       850 I~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr  927 (1178)
T PLN03190        850 LCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGH  927 (1178)
T ss_pred             EEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCH
Confidence            79999999999999999987 57999999999999999999999987434445888999999966  889999887 699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCCC
Q 044334          322 CVNNNIQKCLQFQLTVNFAALIVNIF-AAVQKFRNS  356 (358)
Q Consensus       322 ~~~~~i~~~i~~~~~~n~~~~~~~~~-g~~~~~~~~  356 (358)
                      ..|+|+.+.+.|.+..|++..+..++ +.++.|+.+
T Consensus       928 ~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~  963 (1178)
T PLN03190        928 WNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLT  963 (1178)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence            99999999999999999999766665 666667654

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3e-35  Score=290.20  Aligned_cols=274  Identities=22%  Similarity=0.331  Sum_probs=202.3

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcee---------------CCC-----------ccCCCEE
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRV---------------TGD-----------QIPADGL   69 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~V---------------~G~-----------~IPaDg~   69 (358)
                      +..||.+++.+++++....--..|+.|+-..++++....-.+.|               |||           .||||.+
T Consensus       214 DeyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDll  293 (1160)
T KOG0209|consen  214 DEYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLL  293 (1160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEE
Confidence            45799999988888877666666777766666666544444555               666           5699999


Q ss_pred             EEeeCceEEecCCCcCCCcceeeec-------------C---CceEEE-------------------------Eeeeccc
Q 044334           70 FLNGHSLKVDECSMTGETDRWLWLR-------------A---RHFCWN-------------------------EHCLGTR  108 (358)
Q Consensus        70 vl~g~~~~vDes~lTGEs~Pv~k~~-------------~---~~~~~~-------------------------V~~~G~~  108 (358)
                      ++.| ++.||||||||||.|.-|.+             +   .++++|                         |.+||++
T Consensus       294 LL~G-sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFe  372 (1160)
T KOG0209|consen  294 LLRG-SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFE  372 (1160)
T ss_pred             EEec-ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEecccc
Confidence            9999 89999999999999999972             1   235665                         9999999


Q ss_pred             ccch-----------------hHH------------------hhhccccc-chHHHHHHHHHHHHHhhcCCchhHHH---
Q 044334          109 DEMG-----------------NRE------------------FLGTNTKV-DDVIYIIAAAVTIIVVAIPEGLPLAL---  149 (358)
Q Consensus       109 T~~g-----------------~~~------------------~~~~~~~~-~~~~~~~~~~~~~lv~a~P~~L~la~---  149 (358)
                      |..|                 ...                  |..+...+ .+-.+.++-+.-++...+|+-||+-+   
T Consensus       373 TSQGkLvRtilf~aervTaNn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmA  452 (1160)
T KOG0209|consen  373 TSQGKLVRTILFSAERVTANNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMA  452 (1160)
T ss_pred             ccCCceeeeEEecceeeeeccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHH
Confidence            9999                 000                  00111111 34445566667777778899888766   


Q ss_pred             -------------------------HHHHHhhCceeeEeecC-----------CC----------C--------------
Q 044334          150 -------------------------LQEAVGLNTICNVYKSN-----------SE----------S--------------  169 (358)
Q Consensus       150 -------------------------~~~~~~l~~t~t~~~~~-----------~~----------~--------------  169 (358)
                                               .++..|+|||||+|.++           +.          +              
T Consensus       453 VNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~  532 (1160)
T KOG0209|consen  453 VNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVL  532 (1160)
T ss_pred             HHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHH
Confidence                                     57788999999999862           00          0              


Q ss_pred             -ceeEcCCccHHHHHHHHHHhcCCCCC----c------------------------------------------------
Q 044334          170 -TTEITGSPTEKAILSWAVFDLGMNRN----N------------------------------------------------  196 (358)
Q Consensus       170 -~~~~~g~~~e~all~~a~~~~~~~~~----~------------------------------------------------  196 (358)
                       ...++|||.|+|.+.+..|....+..    +                                                
T Consensus       533 le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~  612 (1160)
T KOG0209|consen  533 LEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQ  612 (1160)
T ss_pred             hcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHH
Confidence             02378999999999887533322110    0                                                


Q ss_pred             --------------hHHHhccCceEEEEeecccc--------------------------------------------C-
Q 044334          197 --------------TDVAAKSLRCMAFARTKVAE--------------------------------------------A-  217 (358)
Q Consensus       197 --------------~~~a~~G~rvl~~a~~~~~~--------------------------------------------~-  217 (358)
                                    .+++++|.|||+++|+.++.                                            . 
T Consensus       613 ~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH  692 (1160)
T KOG0209|consen  613 EMLRDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSH  692 (1160)
T ss_pred             HHHHhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCc
Confidence                          68899999999999999984                                            1 


Q ss_pred             Cceeeecccc------------------------------------------------------------------cccc
Q 044334          218 DDEVIEGVQF------------------------------------------------------------------RNLS  231 (358)
Q Consensus       218 ~~~~ltGd~~------------------------------------------------------------------~~~~  231 (358)
                      ..+|+|||+.                                                                  ..+.
T Consensus       693 ~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~  772 (1160)
T KOG0209|consen  693 RVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQ  772 (1160)
T ss_pred             eEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHh
Confidence            4566666663                                                                  2221


Q ss_pred             h-hhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          232 A-EEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       232 ~-~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      + +.+.+.++...||||+.|.||..++..|++.|+.++|+|||.||..|||+||||||+=
T Consensus       773 ~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL  832 (1160)
T KOG0209|consen  773 ATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL  832 (1160)
T ss_pred             hhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence            1 1234445566799999999999999999999999999999999999999999999974

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=99.94  E-value=4.7e-26  Score=221.91  Aligned_cols=90  Identities=31%  Similarity=0.350  Sum_probs=79.6

Q ss_pred             eeeecCChhhHHHHHHhhcCC-CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHH-H
Q 044334          243 RVTARSSVPDKLLTVQSLKPK-GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRW-G  320 (358)
Q Consensus       243 ~v~a~~~P~~K~~iv~~l~~~-g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~-~  320 (358)
                      .|+||++|+||+++++.+|+. |..|+++|||-||..|+++||+||.+-++...+|.-+||+.+.+  |+++.+++.+ |
T Consensus       759 Vv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HG  836 (1051)
T KOG0210|consen  759 VVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHG  836 (1051)
T ss_pred             EEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccc
Confidence            499999999999999999864 88999999999999999999999998557788899999999977  9999998876 8


Q ss_pred             HHHHHHHHHHHHHH
Q 044334          321 RCVNNNIQKCLQFQ  334 (358)
Q Consensus       321 r~~~~~i~~~i~~~  334 (358)
                      |..|++..+.-+|.
T Consensus       837 R~SYkrsa~laqfV  850 (1051)
T KOG0210|consen  837 RNSYKRSAKLAQFV  850 (1051)
T ss_pred             cchHHHHHHHHHHH
Confidence            98888876655554

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=99.89  E-value=1.1e-22  Score=213.46  Aligned_cols=113  Identities=21%  Similarity=0.185  Sum_probs=98.0

Q ss_pred             eeeecCChhhHHHHHHhhcC-CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH-HH
Q 044334          243 RVTARSSVPDKLLTVQSLKP-KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR-WG  320 (358)
Q Consensus       243 ~v~a~~~P~~K~~iv~~l~~-~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~-~~  320 (358)
                      .+|||++|.||+.+|+..++ .+..++.+|||.||.+|++.|||||.+++.+..+|..++|+.+.+  |..+.+++. +|
T Consensus       772 ViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHG  849 (1151)
T KOG0206|consen  772 VICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHG  849 (1151)
T ss_pred             EEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeec
Confidence            49999999999999999974 588999999999999999999999999878888999999999987  777776554 69


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCCCC
Q 044334          321 RCVNNNIQKCLQFQLTVNFAALIVNIFA-AVQKFRNSS  357 (358)
Q Consensus       321 r~~~~~i~~~i~~~~~~n~~~~~~~~~g-~~~~~~~~~  357 (358)
                      |..|.++.+.+.|+|.+|+...+..+.. ++++|+.++
T Consensus       850 hW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~  887 (1151)
T KOG0206|consen  850 HWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQT  887 (1151)
T ss_pred             ceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Confidence            9999999999999999999996666554 445676665

>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=99.75  E-value=2e-18  Score=156.00  Aligned_cols=125  Identities=26%  Similarity=0.390  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--cee-----------------------CCCccCCCEEEEe-eCceE
Q 044334           24 GVISAVLVVVIVSAVSNFKQSRQFQALANESSD--IRV-----------------------TGDQIPADGLFLN-GHSLK   77 (358)
Q Consensus        24 ~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~--~~V-----------------------~G~~IPaDg~vl~-g~~~~   77 (358)
                      +++++++++.+++.++++|+++.++++++..++  +.|                       +||+|||||+|++ | .+.
T Consensus         1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~   79 (230)
T PF00122_consen    1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAY   79 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEE
T ss_pred             CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccc
Confidence            467888889999999999999999999887644  334                       8889999999999 8 899


Q ss_pred             EecCCCcCCCcceeee-----cCCceEEE-----------Eeeecccccch-----------------------------
Q 044334           78 VDECSMTGETDRWLWL-----RARHFCWN-----------EHCLGTRDEMG-----------------------------  112 (358)
Q Consensus        78 vDes~lTGEs~Pv~k~-----~~~~~~~~-----------V~~~G~~T~~g-----------------------------  112 (358)
                      ||||.||||+.|+.|.     +++.++.|           |++||.+|.++                             
T Consensus        80 vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (230)
T PF00122_consen   80 VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILII  159 (230)
T ss_dssp             EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHh
Confidence            9999999999999999     66543332           99999999888                             


Q ss_pred             ------hHHhhhccc--ccchHHHHHHHHHHHHHhhcCCchhHHH
Q 044334          113 ------NREFLGTNT--KVDDVIYIIAAAVTIIVVAIPEGLPLAL  149 (358)
Q Consensus       113 ------~~~~~~~~~--~~~~~~~~~~~~~~~lv~a~P~~L~la~  149 (358)
                            +..+..++.  ...++...+..++++++++|||+|++++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~  204 (230)
T PF00122_consen  160 IILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLAL  204 (230)
T ss_dssp             HHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHH
T ss_pred             cccccchhhhccceecccccccccccccccceeeeecccceeehH
Confidence                  111112222  4457788899999999999999999999

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=99.33  E-value=1.2e-12  Score=103.93  Aligned_cols=98  Identities=20%  Similarity=0.162  Sum_probs=77.3

Q ss_pred             CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC--CchH
Q 044334          218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI--EGTK  295 (358)
Q Consensus       218 ~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~--~~~~  295 (358)
                      +..+-|||....+.+.+-...++..++++..-|+.|.++++.|++++++|.|+|||.||.+||+.||+||..=+  +..+
T Consensus        47 ~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~  126 (152)
T COG4087          47 DIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPE  126 (152)
T ss_pred             eEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcch
Confidence            45788999987555433333456678999999999999999999999999999999999999999999997532  2345


Q ss_pred             HHHhcCCEEEeCCCcchHHHHH
Q 044334          296 WAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       296 ~a~~~adiil~~~~~~~i~~~i  317 (358)
                      -+.++||+++.+  +..+.++.
T Consensus       127 r~l~~ADvvik~--i~e~ldl~  146 (152)
T COG4087         127 RLLLTADVVLKE--IAEILDLL  146 (152)
T ss_pred             HHHhhchhhhhh--HHHHHHHh
Confidence            566999999954  55555443

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.06  E-value=5.5e-11  Score=105.52  Aligned_cols=65  Identities=32%  Similarity=0.345  Sum_probs=57.8

Q ss_pred             Cceeeecccccccchhhhhhccccce--eeecC--ChhhH--HHHHHhhcCCCcEEEEecCCCCCCcccccCC
Q 044334          218 DDEVIEGVQFRNLSAEEGVAKIENIR--VTARS--SVPDK--LLTVQSLKPKGYVVAVTGDGTNDAPAPKVAD  284 (358)
Q Consensus       218 ~~~~ltGd~~~~~~~~~~~~~~~~~~--v~a~~--~P~~K--~~iv~~l~~~g~~v~~vGDG~ND~~al~~Ad  284 (358)
                      +..++|||+..  ....+.+.++...  ++++.  +|++|  .++++.|+.+++.|+|+|||.||++|+++||
T Consensus       145 ~~~i~TGD~~~--~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  145 KVAILTGDNES--TASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             EEEEEESSEHH--HHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred             ceeeeeccccc--cccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence            46899999976  5667777777765  99999  99999  9999999977779999999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.41  E-value=1.3e-07  Score=81.16  Aligned_cols=99  Identities=10%  Similarity=0.063  Sum_probs=72.9

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecC--ChhhHHHHHHhhcCCCcEEEEecCCC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARS--SVPDKLLTVQSLKPKGYVVAVTGDGT  274 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~--~P~~K~~iv~~l~~~g~~v~~vGDG~  274 (358)
                      ..+.++|+++             .++|+....  ......+.++...+|...  .|+-...+++.++-....++|+||+.
T Consensus        44 ~~L~~~Gi~l-------------aIiT~k~~~--~~~~~l~~lgi~~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~  108 (169)
T TIGR02726        44 IVLQLCGIDV-------------AIITSKKSG--AVRHRAEELKIKRFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDL  108 (169)
T ss_pred             HHHHHCCCEE-------------EEEECCCcH--HHHHHHHHCCCcEEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCH
Confidence            4555667666             467777654  334455556665655555  44566666666665556899999999


Q ss_pred             CCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcc
Q 044334          275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT  311 (358)
Q Consensus       275 ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~  311 (358)
                      ||.++++.|+++++|+ ++.+..+..|++|...++=.
T Consensus       109 nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~  144 (169)
T TIGR02726       109 VDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGH  144 (169)
T ss_pred             HHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCC
Confidence            9999999999999999 99999999999998654433

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.31  E-value=3.8e-07  Score=80.84  Aligned_cols=71  Identities=15%  Similarity=0.073  Sum_probs=60.3

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWG  320 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~  320 (358)
                      ..|+.|..+++.+++.|..+.++|||.||.++++.|++|+++.  +.+..++.||=.-.-.+.+.+...+.++
T Consensus       128 ~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (203)
T TIGR02137       128 RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA  198 (203)
T ss_pred             cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence            4578999999999888888999999999999999999999994  6677777777666667788888877765

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=98.22  E-value=9.1e-07  Score=81.73  Aligned_cols=67  Identities=24%  Similarity=0.184  Sum_probs=57.5

Q ss_pred             hhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      -.|..-++.|.+.    ...|+++|||.||.+||+.|+.|++|+ ++.+.+|+.||+|..+++-.++.+.++
T Consensus       195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~  265 (270)
T PRK10513        195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE  265 (270)
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence            3477777776433    357999999999999999999999999 999999999999998888888888775

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.10  E-value=3.6e-06  Score=79.71  Aligned_cols=67  Identities=22%  Similarity=0.242  Sum_probs=57.6

Q ss_pred             hhhHHHHHHhhcCC-C---cEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          250 VPDKLLTVQSLKPK-G---YVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       250 P~~K~~iv~~l~~~-g---~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .+.|.+.++.+.++ |   ..+.++|||.||.+|++.|++|++|  ++.+..++.||.++...++.++..++.
T Consensus       246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~  316 (322)
T PRK11133        246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS  316 (322)
T ss_pred             cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence            46788888877543 3   5799999999999999999999999  678999999999999999988887664

>PRK10976 putative hydrolase; Provisional

Probab=98.08  E-value=2.4e-06  Score=78.71  Aligned_cols=71  Identities=23%  Similarity=0.144  Sum_probs=57.5

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCC--EEEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD--IIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~ad--iil~~~~~~~i~~~i~  318 (358)
                      +..|.  .|..-++.+.+.    ...|+++||+.||.+||+.|+.|+||+ ++.+..|+.||  .|+.+++=.++.++++
T Consensus       183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~  261 (266)
T PRK10976        183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR  261 (266)
T ss_pred             EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence            44453  477777776433    356999999999999999999999999 99999999987  6777777778877764

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.06  E-value=3e-06  Score=76.25  Aligned_cols=65  Identities=23%  Similarity=0.177  Sum_probs=55.7

Q ss_pred             HHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          253 KLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       253 K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      |..-++.+.+    ....++++||+.||.+|++.|+.|++|+ ++.+..|+.||++..+++-.++.++++
T Consensus       158 Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~  226 (230)
T PRK01158        158 KGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE  226 (230)
T ss_pred             hHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence            6666666543    3456999999999999999999999999 999999999999998888888887775

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.05  E-value=1.1e-05  Score=68.30  Aligned_cols=95  Identities=14%  Similarity=0.138  Sum_probs=68.4

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhh----cCCCcEEEEecC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSL----KPKGYVVAVTGD  272 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l----~~~g~~v~~vGD  272 (358)
                      +.+.++|+++             .++|++...  ..+...+.++...++....  .|.+.++.+    .-....++|+||
T Consensus        38 ~~Lk~~G~~i-------------~IvTn~~~~--~~~~~l~~~gi~~~~~~~~--~k~~~~~~~~~~~~~~~~~~~~vGD  100 (154)
T TIGR01670        38 RCALKSGIEV-------------AIITGRKAK--LVEDRCKTLGITHLYQGQS--NKLIAFSDILEKLALAPENVAYIGD  100 (154)
T ss_pred             HHHHHCCCEE-------------EEEECCCCH--HHHHHHHHcCCCEEEeccc--chHHHHHHHHHHcCCCHHHEEEECC
Confidence            5667778887             577887755  2344555556555555432  344444443    334467999999


Q ss_pred             CCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCC
Q 044334          273 GTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDN  309 (358)
Q Consensus       273 G~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~  309 (358)
                      +.||.++++.|++++++. ++.+..+..+++++..+.
T Consensus       101 s~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~  136 (154)
T TIGR01670       101 DLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG  136 (154)
T ss_pred             CHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence            999999999999999998 788888999999997654

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.02  E-value=2.4e-06  Score=76.29  Aligned_cols=66  Identities=26%  Similarity=0.154  Sum_probs=54.7

Q ss_pred             hhhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHH
Q 044334          250 VPDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       250 P~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      .-.|...++.+.+.    ...++++||+.||.+|++.|+.|++|+ ++.+.+++.||++..+++-.++.++
T Consensus       145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~  214 (215)
T TIGR01487       145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV  214 (215)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence            34677777776442    345999999999999999999999999 9999999999999987777776654

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.02  E-value=4.3e-06  Score=77.20  Aligned_cols=66  Identities=23%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|..-++.+.+    ....++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus       199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~  268 (272)
T PRK10530        199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY  268 (272)
T ss_pred             ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence            47766665532    2356999999999999999999999999 888889999999999888888888775

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.01  E-value=3.1e-06  Score=78.36  Aligned_cols=71  Identities=15%  Similarity=0.002  Sum_probs=58.5

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCE--EEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDI--IIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adi--il~~~~~~~i~~~i~  318 (358)
                      +.+|.  .|..-++.|.+.    ...|+.+||+.||.+||+.|+.|+||+ ++.+.+|+.||.  +..+++-.++.++++
T Consensus       181 eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~  259 (272)
T PRK15126        181 EVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT  259 (272)
T ss_pred             EeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence            45554  488888887543    357999999999999999999999999 999999999996  666777778887774

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.99  E-value=4.4e-06  Score=74.86  Aligned_cols=66  Identities=23%  Similarity=0.146  Sum_probs=54.2

Q ss_pred             hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcch----HHHHHH
Q 044334          252 DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS----VVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~----i~~~i~  318 (358)
                      .|..-++.+.+.    ...++++||+.||.+|++.|++|++|+ ++.+..|+.||.|...++-.+    +.+.++
T Consensus       149 ~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~  222 (225)
T TIGR01482       149 NKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ  222 (225)
T ss_pred             CHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence            566666665432    357999999999999999999999999 999999999999998877777    555543

catalyze the same reaction as SPP.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.98  E-value=4.8e-06  Score=76.68  Aligned_cols=68  Identities=28%  Similarity=0.269  Sum_probs=59.0

Q ss_pred             hhHHHHHHhhcC-CCc---EEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          251 PDKLLTVQSLKP-KGY---VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       251 ~~K~~iv~~l~~-~g~---~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      .+|...++.+.+ .|.   .|+.+||+.||.+||+.|+.|++|+ ++.+.+++.||++...++-.++.+.++.
T Consensus       188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~  259 (264)
T COG0561         188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK  259 (264)
T ss_pred             CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence            458888887765 343   4999999999999999999999999 8899999999988888998999888763

>PLN02887 hydrolase family protein

Probab=97.97  E-value=5.4e-06  Score=84.17  Aligned_cols=66  Identities=24%  Similarity=0.288  Sum_probs=56.3

Q ss_pred             hHHHHHHhhcCC-C---cEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKPK-G---YVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~-g---~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|..-++.|.+. |   ..|+++|||.||.+||+.|+.|+||+ ++.+..|+.||+|..+++=.++.++++
T Consensus       507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe  576 (580)
T PLN02887        507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY  576 (580)
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence            466666666433 2   46999999999999999999999999 999999999999998888888888775

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.75  E-value=1.9e-05  Score=71.18  Aligned_cols=66  Identities=23%  Similarity=0.165  Sum_probs=55.1

Q ss_pred             hhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          251 PDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       251 ~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      -.|..-++.|.+    ....++++||+.||.+||+.++.|++|+ ++++..++.|+.++...+=.++.+++
T Consensus       185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~i  254 (254)
T PF08282_consen  185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKAI  254 (254)
T ss_dssp             SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred             CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHhC
Confidence            558888877753    2357999999999999999999999999 99999999999999886657777654

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=97.65  E-value=4.2e-05  Score=68.28  Aligned_cols=63  Identities=25%  Similarity=0.233  Sum_probs=50.5

Q ss_pred             hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHH
Q 044334          252 DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       252 ~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      .|.++++.+.++    ...+.|+||+.||.++++.|+++++++  +.+..++.||.++.++++..+..+
T Consensus       152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~  218 (219)
T TIGR00338       152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL  218 (219)
T ss_pred             ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence            366666654333    246889999999999999999999985  578888999999999998776543

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.65  E-value=7.6e-05  Score=64.98  Aligned_cols=83  Identities=16%  Similarity=0.163  Sum_probs=60.5

Q ss_pred             eeeecccccccchhhhhhccccceeeecCChhhHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchH
Q 044334          220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTK  295 (358)
Q Consensus       220 ~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~  295 (358)
                      .++||....  ....+.+.++...+|..  .+.|...++.+    .-....++|+||+.||.++++.|+++++++ ++.+
T Consensus        68 ~I~T~~~~~--~v~~~l~~lgl~~~f~g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~  142 (183)
T PRK09484         68 AIITGRKSK--LVEDRMTTLGITHLYQG--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHP  142 (183)
T ss_pred             EEEeCCCcH--HHHHHHHHcCCceeecC--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhH
Confidence            477887644  33455566666666653  34465555554    323457999999999999999999999998 7888


Q ss_pred             HHHhcCCEEEeC
Q 044334          296 WAKEGSDIIIMD  307 (358)
Q Consensus       296 ~a~~~adiil~~  307 (358)
                      ..+..+|+++..
T Consensus       143 ~~~~~a~~v~~~  154 (183)
T PRK09484        143 LLLPRADYVTRI  154 (183)
T ss_pred             HHHHhCCEEecC
Confidence            888999999964

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.62  E-value=3e-05  Score=71.10  Aligned_cols=69  Identities=26%  Similarity=0.192  Sum_probs=56.9

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      +..|.  .|..-++.+.+.    ...++++||+.||.+|++.|+.|++|+ ++.+..++.|++++.+++-.++.++
T Consensus       181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~  255 (256)
T TIGR00099       181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA  255 (256)
T ss_pred             EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence            44543  488888877543    357999999999999999999999999 8999999999999988777776654

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.51  E-value=6.3e-05  Score=68.98  Aligned_cols=54  Identities=19%  Similarity=0.113  Sum_probs=45.5

Q ss_pred             CcEEEEecCCCCCCcccccCCcceecCCCch---HHHHhc--C-CEEEeCCCcchHHHHHH
Q 044334          264 GYVVAVTGDGTNDAPAPKVADIGPWMGIEGT---KWAKEG--S-DIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       264 g~~v~~vGDG~ND~~al~~Advgia~~~~~~---~~a~~~--a-diil~~~~~~~i~~~i~  318 (358)
                      ...++++||+.||.+|++.|+.|++|+ ++.   +..|+.  | +++...++-.++.++++
T Consensus       194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~  253 (256)
T TIGR01486       194 AIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE  253 (256)
T ss_pred             CceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence            457999999999999999999999999 776   467776  4 48887888888888775

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.45  E-value=0.00012  Score=66.38  Aligned_cols=66  Identities=15%  Similarity=0.114  Sum_probs=53.8

Q ss_pred             hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCC----EEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD----IIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~ad----iil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.++    ...++++||+.||.+|++.++.|++|+ ++.+..++.|+    ++...++-.++.++++
T Consensus       159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~  232 (236)
T TIGR02471       159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN  232 (236)
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence            566667766432    236889999999999999999999999 89999999999    7776667677877775

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.43  E-value=7.4e-05  Score=69.20  Aligned_cols=67  Identities=16%  Similarity=0.017  Sum_probs=51.0

Q ss_pred             hhHHHHHHhhcC-------CCcEEEEecCCCCCCcccccCCcceecCCCch-HH-----HHhcCCEEEeCCCcchHHHHH
Q 044334          251 PDKLLTVQSLKP-------KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGT-KW-----AKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       251 ~~K~~iv~~l~~-------~g~~v~~vGDG~ND~~al~~Advgia~~~~~~-~~-----a~~~adiil~~~~~~~i~~~i  317 (358)
                      -.|..-++.|.+       ....|+.+||+.||.+||+.|++|++|+ +.. +.     .+..+|++....+-.++.+++
T Consensus       186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l  264 (271)
T PRK03669        186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGL  264 (271)
T ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence            346666655533       3457999999999999999999999998 444 21     344788999888888888877


Q ss_pred             H
Q 044334          318 R  318 (358)
Q Consensus       318 ~  318 (358)
                      +
T Consensus       265 ~  265 (271)
T PRK03669        265 D  265 (271)
T ss_pred             H
Confidence            5

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.38  E-value=0.00018  Score=63.47  Aligned_cols=68  Identities=22%  Similarity=0.249  Sum_probs=50.7

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+.|...++.++..+..+.|+|||.||.++.+.|++|+..+ .........++..+. +++..+...+.
T Consensus       129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l~  196 (205)
T PRK13582        129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAID  196 (205)
T ss_pred             ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHHH
Confidence            578899999999888889999999999999999999999986 444444445555222 45665554443

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.31  E-value=0.00015  Score=67.19  Aligned_cols=66  Identities=21%  Similarity=0.091  Sum_probs=51.0

Q ss_pred             hHHHHHHhhc----CCC-cEEEEecCCCCCCcccccCCcceecCCCchHHHH----hcC-CEEE--eCCCcchHHHHHH
Q 044334          252 DKLLTVQSLK----PKG-YVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAK----EGS-DIII--MDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~----~~g-~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~----~~a-diil--~~~~~~~i~~~i~  318 (358)
                      .|..-++.+.    -.. ..|+++||+.||.+|++.|++|++|+ ++.+..|    ..+ +.+.  ..++-.++.+.++
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~  267 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN  267 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence            4555555554    334 78999999999999999999999999 9999888    666 5666  4556667777664

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=96.93  E-value=0.00054  Score=61.10  Aligned_cols=56  Identities=20%  Similarity=0.192  Sum_probs=41.0

Q ss_pred             CChhhHHHHHHhhcC-CCc---EEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEE
Q 044334          248 SSVPDKLLTVQSLKP-KGY---VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIII  305 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~-~g~---~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil  305 (358)
                      +..+.|...++.+.+ .|.   .+.++|||.||.|+|+.|+.+++.+  +....+..|+...
T Consensus       140 ~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~  199 (212)
T COG0560         140 CDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI  199 (212)
T ss_pred             cCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence            344788888866654 354   4899999999999999999999996  3444444454444

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=96.77  E-value=0.00016  Score=59.97  Aligned_cols=95  Identities=17%  Similarity=0.188  Sum_probs=74.6

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCC----CcEEEEecC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK----GYVVAVTGD  272 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~----g~~v~~vGD  272 (358)
                      ..+...|.++             .++||.+-.  ..+.-++.++...+|-..  ++|....+.|.++    -..|+++||
T Consensus        45 k~l~~~Gi~v-------------AIITGr~s~--ive~Ra~~LGI~~~~qG~--~dK~~a~~~L~~~~~l~~e~~ayiGD  107 (170)
T COG1778          45 KLLLKSGIKV-------------AIITGRDSP--IVEKRAKDLGIKHLYQGI--SDKLAAFEELLKKLNLDPEEVAYVGD  107 (170)
T ss_pred             HHHHHcCCeE-------------EEEeCCCCH--HHHHHHHHcCCceeeech--HhHHHHHHHHHHHhCCCHHHhhhhcC
Confidence            4555567766             689998844  455667778887777554  5787777776543    357999999


Q ss_pred             CCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCC
Q 044334          273 GTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDN  309 (358)
Q Consensus       273 G~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~  309 (358)
                      -.||.|+++.-..+++.. ++.+..++.+|+|+....
T Consensus       108 D~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~G  143 (170)
T COG1778         108 DLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKG  143 (170)
T ss_pred             ccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccC
Confidence            999999999999999998 889999999999998754

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=96.71  E-value=0.00093  Score=58.46  Aligned_cols=53  Identities=28%  Similarity=0.277  Sum_probs=38.2

Q ss_pred             ChhhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCC
Q 044334          249 SVPDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD  302 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~ad  302 (358)
                      .|..|.++++.+.++    ...+.|+||+.||.++++.|+++++++ ......+.++|
T Consensus       144 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~  200 (201)
T TIGR01491       144 TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD  200 (201)
T ss_pred             ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence            345676666665432    346999999999999999999999997 44444554444

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=96.34  E-value=0.0089  Score=51.58  Aligned_cols=40  Identities=25%  Similarity=0.222  Sum_probs=33.1

Q ss_pred             hhHHHHHHhhcCC--CcEEEEecCCCCCCcccccCCcceecC
Q 044334          251 PDKLLTVQSLKPK--GYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       251 ~~K~~iv~~l~~~--g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      .-|.++++.+++.  -..++|+|||.||.+|++.||.=|+.+
T Consensus       158 ggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~  199 (227)
T KOG1615|consen  158 GGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG  199 (227)
T ss_pred             CccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence            4699999999874  357999999999999999977766655

>PLN02382 probable sucrose-phosphatase

Probab=96.33  E-value=0.0037  Score=61.45  Aligned_cols=65  Identities=22%  Similarity=0.141  Sum_probs=48.1

Q ss_pred             HHHHHHhhcCC-------CcEEEEecCCCCCCcccccCC-cceecCCCchHHHHhcC--------CEEEe-CCCcchHHH
Q 044334          253 KLLTVQSLKPK-------GYVVAVTGDGTNDAPAPKVAD-IGPWMGIEGTKWAKEGS--------DIIIM-DDNFTSVVT  315 (358)
Q Consensus       253 K~~iv~~l~~~-------g~~v~~vGDG~ND~~al~~Ad-vgia~~~~~~~~a~~~a--------diil~-~~~~~~i~~  315 (358)
                      |..-++.|.+.       ...++.+||+.||.++|+.++ .||+|+ ++.+..++.+        +++.. +.+-.++.+
T Consensus       176 Kg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~  254 (413)
T PLN02382        176 KGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQ  254 (413)
T ss_pred             HHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence            77777766443       347899999999999999999 699999 8888887642        55533 345566666


Q ss_pred             HHH
Q 044334          316 DQR  318 (358)
Q Consensus       316 ~i~  318 (358)
                      +++
T Consensus       255 al~  257 (413)
T PLN02382        255 AIG  257 (413)
T ss_pred             HHH
Confidence            664

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=96.14  E-value=0.0056  Score=55.85  Aligned_cols=66  Identities=15%  Similarity=0.049  Sum_probs=47.5

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCccccc-CCcceecCCCchHHHHhcCC-------EEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKV-ADIGPWMGIEGTKWAKEGSD-------IIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~-Advgia~~~~~~~~a~~~ad-------iil~~~~~~~i~~~i~  318 (358)
                      .|..-++.+.+    ....|+++||+.||.+|++. ++.|++|+ ++.+..++.++       ++.....-.++.+.++
T Consensus       167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~  244 (249)
T TIGR01485       167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA  244 (249)
T ss_pred             ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence            46666666643    24579999999999999998 77999999 88888876443       4444445555655553

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=95.90  E-value=0.0052  Score=54.72  Aligned_cols=40  Identities=23%  Similarity=0.118  Sum_probs=35.4

Q ss_pred             hhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          251 PDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       251 ~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      ..|..+++.++.....+.|+|||.||.++.+.||+.++-+
T Consensus       143 ~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~  182 (214)
T TIGR03333       143 CCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD  182 (214)
T ss_pred             CCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence            4689999998877778999999999999999999988754

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PLN02954 phosphoserine phosphatase

Probab=95.72  E-value=0.021  Score=50.93  Aligned_cols=63  Identities=25%  Similarity=0.263  Sum_probs=41.7

Q ss_pred             hhHHHHHHhhcCC--CcEEEEecCCCCCCccccc--CCcceecCCCc-hHHHHhcCCEEEeCCCcchHHH
Q 044334          251 PDKLLTVQSLKPK--GYVVAVTGDGTNDAPAPKV--ADIGPWMGIEG-TKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       251 ~~K~~iv~~l~~~--g~~v~~vGDG~ND~~al~~--Advgia~~~~~-~~~a~~~adiil~~~~~~~i~~  315 (358)
                      ..|.+.++.+.++  ...+.|+||+.||..|.+.  ++++++.+... .+.....+|+++.  ++..+.+
T Consensus       154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~  221 (224)
T PLN02954        154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE  221 (224)
T ss_pred             ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence            3477777766543  2468999999999999777  56666665221 2333456898884  4655544

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=95.39  E-value=0.0095  Score=51.50  Aligned_cols=29  Identities=28%  Similarity=0.313  Sum_probs=25.9

Q ss_pred             HHHHHHhh------cCCCcEEEEecCCCCCCcccc
Q 044334          253 KLLTVQSL------KPKGYVVAVTGDGTNDAPAPK  281 (358)
Q Consensus       253 K~~iv~~l------~~~g~~v~~vGDG~ND~~al~  281 (358)
                      |.+.++.+      +.....+.++|||.||.|+||
T Consensus       158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence            99999999      455779999999999999985

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=95.24  E-value=0.031  Score=50.01  Aligned_cols=68  Identities=24%  Similarity=0.302  Sum_probs=51.2

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCC---cceecCCC-chHHHHhcCCEEEeCCCcchHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVAD---IGPWMGIE-GTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Ad---vgia~~~~-~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      -.|.......+.+....+.++||||..+|..|=+.|+   +|+..|.+ ........+|.++.  ++..+...+
T Consensus       146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l  217 (220)
T COG0546         146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL  217 (220)
T ss_pred             cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence            3567777777777766457999999999999999998   77888742 45566677999984  476666554

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.09  E-value=0.01  Score=52.97  Aligned_cols=31  Identities=29%  Similarity=0.345  Sum_probs=26.1

Q ss_pred             hhcCCCcEEEEecCCCCCCcccccCCcceec
Q 044334          259 SLKPKGYVVAVTGDGTNDAPAPKVADIGPWM  289 (358)
Q Consensus       259 ~l~~~g~~v~~vGDG~ND~~al~~Advgia~  289 (358)
                      .+.-....|+++||+.||.+||+.|+.|+++
T Consensus       190 ~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       190 TYNQPDVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             HhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence            3333456799999999999999999999986

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=95.02  E-value=0.021  Score=50.02  Aligned_cols=43  Identities=14%  Similarity=0.069  Sum_probs=34.2

Q ss_pred             CChhhHHHHHHhhcC-CC---cEEEEecCCCCCCcccccCCcceecC
Q 044334          248 SSVPDKLLTVQSLKP-KG---YVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~-~g---~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      +.++.|...++.+.+ .+   ..+.++||+.+|.|+++.|+.++.+.
T Consensus       151 ~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~  197 (202)
T TIGR01490       151 CKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN  197 (202)
T ss_pred             CCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence            345788887876543 33   36889999999999999999999886

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit

Probab=94.99  E-value=0.03  Score=42.79  Aligned_cols=41  Identities=34%  Similarity=0.481  Sum_probs=31.4

Q ss_pred             hhCceeeEeecCCCCceeEcCCccHHHHHHHHHHhcCCCCCc
Q 044334          155 GLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNRNN  196 (358)
Q Consensus       155 ~l~~t~t~~~~~~~~~~~~~g~~~e~all~~a~~~~~~~~~~  196 (358)
                      ++|+++.+..+++.......|+|+|.||+.++. +.|.....
T Consensus         1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~-~~g~~~~~   41 (91)
T PF13246_consen    1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAK-KLGVGIDI   41 (91)
T ss_pred             CCccccEeecCCCCccccccCCcCHHHHHHHHH-HcCCCCcH
Confidence            589999887654433445899999999999999 88655444

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=94.91  E-value=0.019  Score=53.08  Aligned_cols=65  Identities=15%  Similarity=0.155  Sum_probs=47.6

Q ss_pred             cCCh--hhHHHHHHhhcCC----CcEEEEecCCCCCCcccccC----CcceecCCCchHHHHhcCCEEEeCCCcchHHHH
Q 044334          247 RSSV--PDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVA----DIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       247 ~~~P--~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~A----dvgia~~~~~~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      ++.|  .+|...++.+.+.    ...++++||+.||.+|++.+    +.||+|| ++.    ..|++.+.  +...+..+
T Consensus       167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~  239 (266)
T PRK10187        167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSW  239 (266)
T ss_pred             EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHH
Confidence            4444  4688888776433    35789999999999999999    9999999 553    45777774  56666655


Q ss_pred             HH
Q 044334          317 QR  318 (358)
Q Consensus       317 i~  318 (358)
                      +.
T Consensus       240 L~  241 (266)
T PRK10187        240 LE  241 (266)
T ss_pred             HH
Confidence            54

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=94.87  E-value=0.055  Score=48.10  Aligned_cols=68  Identities=24%  Similarity=0.294  Sum_probs=48.0

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc-ceec--CCC-chHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI-GPWM--GIE-GTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv-gia~--~~~-~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      |+--..+++.++.....+.++||+.||..+.+.+++ ++.+  |.. ..+.....+++++  +++..+...+.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~  223 (226)
T PRK13222        152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL  223 (226)
T ss_pred             hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence            444456777777666789999999999999999988 4443  311 2334455788877  568888877654

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=94.73  E-value=0.011  Score=50.43  Aligned_cols=36  Identities=25%  Similarity=0.202  Sum_probs=28.7

Q ss_pred             CChhhHHHHHHhhcCC----CcEEEEecCCCCCCcccccC
Q 044334          248 SSVPDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVA  283 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~A  283 (358)
                      ..+..|...++.+.++    ...+.++|||.||.++++.|
T Consensus       138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       138 PEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             CCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            4467899999887543    34689999999999998865

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=94.64  E-value=0.023  Score=48.87  Aligned_cols=37  Identities=22%  Similarity=0.161  Sum_probs=32.5

Q ss_pred             hHHHHHHhhcCC-CcEEEEecCCCCCCcccccCCccee
Q 044334          252 DKLLTVQSLKPK-GYVVAVTGDGTNDAPAPKVADIGPW  288 (358)
Q Consensus       252 ~K~~iv~~l~~~-g~~v~~vGDG~ND~~al~~Advgia  288 (358)
                      .|.++++.++++ ...+.|+|||.||..|.+.||+-.|
T Consensus       149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a  186 (188)
T TIGR01489       149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA  186 (188)
T ss_pred             CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence            599999999877 7889999999999999999987554

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=94.57  E-value=0.022  Score=50.79  Aligned_cols=38  Identities=26%  Similarity=0.106  Sum_probs=33.5

Q ss_pred             hHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceec
Q 044334          252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWM  289 (358)
Q Consensus       252 ~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~  289 (358)
                      .|..+++.++.....+.|+|||.||.+|.+.||+.++-
T Consensus       148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~  185 (219)
T PRK09552        148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR  185 (219)
T ss_pred             chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence            48899999987777899999999999999999997663

>PTZ00174 phosphomannomutase; Provisional

Probab=94.55  E-value=0.017  Score=52.59  Aligned_cols=56  Identities=20%  Similarity=0.090  Sum_probs=44.7

Q ss_pred             cCCh--hhHHHHHHhhcCCCcEEEEecC----CCCCCcccccC-CcceecCCCchHHHHhcCCE
Q 044334          247 RSSV--PDKLLTVQSLKPKGYVVAVTGD----GTNDAPAPKVA-DIGPWMGIEGTKWAKEGSDI  303 (358)
Q Consensus       247 ~~~P--~~K~~iv~~l~~~g~~v~~vGD----G~ND~~al~~A-dvgia~~~~~~~~a~~~adi  303 (358)
                      +..|  -+|..-++.|.+....|+.+||    |.||.+||+.| -.|++++ ++.+..+..+.+
T Consensus       181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~  243 (247)
T PTZ00174        181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKEL  243 (247)
T ss_pred             EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHH
Confidence            4444  4699999998777778999999    99999999976 6788887 888877765543

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=93.85  E-value=0.035  Score=49.95  Aligned_cols=26  Identities=31%  Similarity=0.376  Sum_probs=23.9

Q ss_pred             cEEEEecCCCCCCcccccCCcceecC
Q 044334          265 YVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       265 ~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      ..++++||+.||.+||+.|+.|+.+|
T Consensus       200 ~~~i~~GD~~nD~~ml~~ag~~v~v~  225 (225)
T TIGR02461       200 IESVGLGDSENDFPMFEVVDLAFLVG  225 (225)
T ss_pred             ccEEEEcCCHHHHHHHHhCCCcEecC
Confidence            36899999999999999999999875

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=93.40  E-value=0.18  Score=44.29  Aligned_cols=67  Identities=12%  Similarity=0.102  Sum_probs=45.2

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcce---ecCC-CchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGP---WMGI-EGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgi---a~~~-~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+++.++-....++|+||+.+|..+-+.+++..   ..|. +..+..+..+|+++  +++..+..++
T Consensus       133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~  203 (205)
T TIGR01454       133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC  203 (205)
T ss_pred             ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence            455556666666655677999999999999999988853   3331 22344567789887  4465555443

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>KOG4383 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.39  E-value=0.42  Score=48.82  Aligned_cols=109  Identities=12%  Similarity=0.143  Sum_probs=75.2

Q ss_pred             eeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcc--cccCCcceecCCC------------ch--HHH---------
Q 044334          243 RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA--PKVADIGPWMGIE------------GT--KWA---------  297 (358)
Q Consensus       243 ~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~a--l~~Advgia~~~~------------~~--~~a---------  297 (358)
                      ..|..++|+.--+.|+-+|+.|++++++|...|-...  +-+||++|++-.-            ++  ..|         
T Consensus       970 ~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen  970 GLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred             eeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence            3899999999999999999999999999998765433  3668888776310            00  011         


Q ss_pred             -------HhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          298 -------KEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       298 -------~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                             .-+.|+-+-...+-++..+|.-+|..+..+|+++.|.+...+...++.++.-++
T Consensus      1050 QiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~ 1110 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFF 1110 (1354)
T ss_pred             eecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   112233333334455677788899999999999999887766665555554444

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=93.11  E-value=0.027  Score=49.48  Aligned_cols=39  Identities=26%  Similarity=0.199  Sum_probs=31.9

Q ss_pred             hhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceec
Q 044334          251 PDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWM  289 (358)
Q Consensus       251 ~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~  289 (358)
                      .+|...++.+.++    ...++++||+.||.++++.++++++|
T Consensus       162 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam  204 (204)
T TIGR01484       162 VDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV  204 (204)
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence            5677777776433    24699999999999999999999987

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=92.31  E-value=0.29  Score=43.27  Aligned_cols=67  Identities=21%  Similarity=0.217  Sum_probs=45.1

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCch-HHHHhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEGT-KWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~-~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+++.++.....++|+||+.+|..+-+.|++   ++..|.... +.....+|.++  +++..+.+++
T Consensus       140 ~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i  210 (214)
T PRK13288        140 DPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV  210 (214)
T ss_pred             CcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence            4555566677776555679999999999999999988   344442222 23345688876  4577666654

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=92.28  E-value=0.066  Score=55.27  Aligned_cols=42  Identities=19%  Similarity=0.037  Sum_probs=32.4

Q ss_pred             hhhHHHHHHhhcCC----CcEEEEe--cCCCCCCcccccCCcceecCC
Q 044334          250 VPDKLLTVQSLKPK----GYVVAVT--GDGTNDAPAPKVADIGPWMGI  291 (358)
Q Consensus       250 P~~K~~iv~~l~~~----g~~v~~v--GDG~ND~~al~~Advgia~~~  291 (358)
                      --+|..-++.|.+.    ...|..+  |||.||.+||+.||.|++|+.
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~  658 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR  658 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence            45688887777543    2344555  999999999999999999973

>TIGR00685 T6PP trehalose-phosphatase

Probab=91.85  E-value=0.091  Score=47.78  Aligned_cols=64  Identities=20%  Similarity=0.083  Sum_probs=43.2

Q ss_pred             ChhhHHHHHHhhcCC----CcEEEEecCCCCCCcccccC--------CcceecCCCchHHHHhcCCEEEeCCCcchHHHH
Q 044334          249 SVPDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVA--------DIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~A--------dvgia~~~~~~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      .+.+|...++.+.++    ...++|+||+.||.++++.+        ..++.++ .+  ..+..|++++.  +...+.+.
T Consensus       164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v~~~  238 (244)
T TIGR00685       164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQVLEF  238 (244)
T ss_pred             CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHHHHH
Confidence            344566666655432    34789999999999999988        4677884 33  23566888874  45555555


Q ss_pred             H
Q 044334          317 Q  317 (358)
Q Consensus       317 i  317 (358)
                      +
T Consensus       239 L  239 (244)
T TIGR00685       239 L  239 (244)
T ss_pred             H
Confidence            4

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PRK08238 hypothetical protein; Validated

Probab=91.65  E-value=0.35  Score=48.54  Aligned_cols=82  Identities=15%  Similarity=0.016  Sum_probs=51.7

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhcccc-ceeee-----cCChhhHHHHHHhhcCCCcEEEEe
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIEN-IRVTA-----RSSVPDKLLTVQSLKPKGYVVAVT  270 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~-~~v~a-----~~~P~~K~~iv~~l~~~g~~v~~v  270 (358)
                      +++.++|.++             .+.|+....  ..+.+.+.++. +.+.+     ++.|+.|.+.++....++ .+.++
T Consensus        82 ~~lk~~G~~v-------------~LaTas~~~--~a~~i~~~lGlFd~Vigsd~~~~~kg~~K~~~l~~~l~~~-~~~yv  145 (479)
T PRK08238         82 RAERAAGRKL-------------VLATASDER--LAQAVAAHLGLFDGVFASDGTTNLKGAAKAAALVEAFGER-GFDYA  145 (479)
T ss_pred             HHHHHCCCEE-------------EEEeCCCHH--HHHHHHHHcCCCCEEEeCCCccccCCchHHHHHHHHhCcc-CeeEe
Confidence            3556677777             455665543  22334444442 33322     456777877666443222 25788


Q ss_pred             cCCCCCCcccccCCcceecCCCchH
Q 044334          271 GDGTNDAPAPKVADIGPWMGIEGTK  295 (358)
Q Consensus       271 GDG~ND~~al~~Advgia~~~~~~~  295 (358)
                      ||..||.|+++.|+-.++++ .+..
T Consensus       146 GDS~~Dlp~~~~A~~av~Vn-~~~~  169 (479)
T PRK08238        146 GNSAADLPVWAAARRAIVVG-ASPG  169 (479)
T ss_pred             cCCHHHHHHHHhCCCeEEEC-CCHH
Confidence            99999999999999999997 4443

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=91.58  E-value=0.32  Score=43.24  Aligned_cols=76  Identities=17%  Similarity=0.211  Sum_probs=55.3

Q ss_pred             eeecCChhhHHHHHHhhcCC------------------CcEEEEecCCCCCCcccccCCc--ceecCCCchHHHHhcCCE
Q 044334          244 VTARSSVPDKLLTVQSLKPK------------------GYVVAVTGDGTNDAPAPKVADI--GPWMGIEGTKWAKEGSDI  303 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~------------------g~~v~~vGDG~ND~~al~~Adv--gia~~~~~~~~a~~~adi  303 (358)
                      +|.|+.|.+-.+|+...+.-                  ....++|||++.|..+|+.+.-  |+++.-+|.+-|...||+
T Consensus       168 ~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAdV  247 (315)
T COG4030         168 LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEADV  247 (315)
T ss_pred             HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccccccce
Confidence            56666665555555444432                  2456889999999999988642  355444788999999999


Q ss_pred             EEeCCCcchHHHHHHH
Q 044334          304 IIMDDNFTSVVTDQRW  319 (358)
Q Consensus       304 il~~~~~~~i~~~i~~  319 (358)
                      .+...+..++..+|.+
T Consensus       248 Avisp~~~a~~pviel  263 (315)
T COG4030         248 AVISPTAMAEAPVIEL  263 (315)
T ss_pred             EEeccchhhhhHHHHH
Confidence            9999999888888764

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=90.25  E-value=0.19  Score=45.83  Aligned_cols=45  Identities=24%  Similarity=0.208  Sum_probs=34.7

Q ss_pred             hhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHH
Q 044334          251 PDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKW  296 (358)
Q Consensus       251 ~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~  296 (358)
                      ..|...++.|+++    -..|..+||+.||.+||..++-||.++ ++.+.
T Consensus       164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e  212 (247)
T PF05116_consen  164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE  212 (247)
T ss_dssp             -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred             CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence            4588888887654    246778999999999999999999999 67665

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=89.66  E-value=0.37  Score=38.23  Aligned_cols=37  Identities=24%  Similarity=0.241  Sum_probs=29.9

Q ss_pred             cCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccC
Q 044334          247 RSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVA  283 (358)
Q Consensus       247 ~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~A  283 (358)
                      +-.|+.+..+.+.++.....+.++||+.||..+.+.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~  132 (139)
T cd01427          96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAA  132 (139)
T ss_pred             CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHc
Confidence            5566777777777776667899999999999999873

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=89.22  E-value=0.67  Score=42.84  Aligned_cols=63  Identities=21%  Similarity=0.290  Sum_probs=41.9

Q ss_pred             HHHHHhhcCCCcEEEEecCCCCCCcccccCCcc---eecCCC-chHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG---PWMGIE-GTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       254 ~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg---ia~~~~-~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..+.+.+.-....++|+||+.||..+.+.|++.   +..|.. ..+.....+|.++  +++..+.+++.
T Consensus       164 ~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~  230 (272)
T PRK13223        164 LFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA  230 (272)
T ss_pred             HHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence            344555544456799999999999999999973   333311 2233445788888  45777776544

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=88.77  E-value=0.16  Score=47.32  Aligned_cols=40  Identities=13%  Similarity=-0.092  Sum_probs=30.5

Q ss_pred             hhHHHHHHhhc----CC--CcEEEEecCCCCCCcccccCCcceecC
Q 044334          251 PDKLLTVQSLK----PK--GYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       251 ~~K~~iv~~l~----~~--g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      .+|.+-++.|+    +.  .-++...||+.||.+||..||++|.+-
T Consensus       207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~  252 (302)
T PRK12702        207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLP  252 (302)
T ss_pred             CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEec
Confidence            35666655553    32  237788999999999999999999984

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=87.60  E-value=0.42  Score=50.63  Aligned_cols=61  Identities=21%  Similarity=0.124  Sum_probs=45.3

Q ss_pred             hhHHHHHHhhcCC--CcEEEEecCCCCCCcccccC---CcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKPK--GYVVAVTGDGTNDAPAPKVA---DIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~~--g~~v~~vGDG~ND~~al~~A---dvgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      -+|...++.+.+.  -..++++||+.||.+|++.+   ..+++|| ++    +.+|++.+.+  ...+..+++
T Consensus       656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~--~~eV~~~L~  721 (726)
T PRK14501        656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS--QREVRELLR  721 (726)
T ss_pred             CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC--HHHHHHHHH
Confidence            4688888887753  24799999999999999986   5888888 43    5678888864  344555443

>PLN02580 trehalose-phosphatase

Probab=86.99  E-value=0.35  Score=46.91  Aligned_cols=68  Identities=19%  Similarity=0.095  Sum_probs=46.2

Q ss_pred             ecCChh---hHHHHHHhhcCC-C------cEEEEecCCCCCCccccc-----CCcceecCCCchHHHHhcCCEEEeCCCc
Q 044334          246 ARSSVP---DKLLTVQSLKPK-G------YVVAVTGDGTNDAPAPKV-----ADIGPWMGIEGTKWAKEGSDIIIMDDNF  310 (358)
Q Consensus       246 a~~~P~---~K~~iv~~l~~~-g------~~v~~vGDG~ND~~al~~-----Advgia~~~~~~~~a~~~adiil~~~~~  310 (358)
                      -++.|.   +|-..++.+.+. |      ..++++||..||-.|++.     +++||+|+ ++...  ..|++.+.  +.
T Consensus       292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp  366 (384)
T PLN02580        292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DP  366 (384)
T ss_pred             EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CH
Confidence            455563   788888777543 2      135899999999999996     58899998 54432  25677663  45


Q ss_pred             chHHHHHH
Q 044334          311 TSVVTDQR  318 (358)
Q Consensus       311 ~~i~~~i~  318 (358)
                      ..+..+++
T Consensus       367 ~eV~~~L~  374 (384)
T PLN02580        367 SEVMEFLK  374 (384)
T ss_pred             HHHHHHHH
Confidence            56655553

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=86.73  E-value=0.8  Score=40.14  Aligned_cols=63  Identities=17%  Similarity=0.172  Sum_probs=39.6

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCccee-c--CCCc-hHHHHhcCCEEEeCCCcchHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPW-M--GIEG-TKWAKEGSDIIIMDDNFTSVV  314 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia-~--~~~~-~~~a~~~adiil~~~~~~~i~  314 (358)
                      |+-=..+.+.++.....++|+||..||..+.+.|++-.. +  |... .+.....+|.++  +++..+.
T Consensus       144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~  210 (213)
T TIGR01449       144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP  210 (213)
T ss_pred             hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence            333455556665555679999999999999999998543 2  3111 123334678777  3455544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=86.19  E-value=0.44  Score=41.00  Aligned_cols=40  Identities=23%  Similarity=0.188  Sum_probs=35.0

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceec
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWM  289 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~  289 (358)
                      -.+|...|+.|++..+.+.|+|||+.|..|-+..|+=+|-
T Consensus       145 G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK  184 (220)
T COG4359         145 GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK  184 (220)
T ss_pred             CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence            3679999999999999999999999999998888876653

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=82.77  E-value=3  Score=38.64  Aligned_cols=58  Identities=14%  Similarity=0.138  Sum_probs=38.1

Q ss_pred             HhhcCCCcEEEEecCCCCCCcccccCCcce---ecCCCc-hHHHHhcCCEEEeCCCcchHHHHH
Q 044334          258 QSLKPKGYVVAVTGDGTNDAPAPKVADIGP---WMGIEG-TKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       258 ~~l~~~g~~v~~vGDG~ND~~al~~Advgi---a~~~~~-~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      +.++-....++|+||+.+|..+-+.|++-.   ..|... .+.....+|+++  +++..+..++
T Consensus       206 ~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~  267 (273)
T PRK13225        206 AREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV  267 (273)
T ss_pred             HHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence            344434457999999999999999988743   233111 123344689887  5577777654

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=80.24  E-value=1.4  Score=39.78  Aligned_cols=35  Identities=26%  Similarity=0.177  Sum_probs=25.9

Q ss_pred             ecCCh-hhHHHHHHhhcCC----C---cEEEEecCCCCCCccc
Q 044334          246 ARSSV-PDKLLTVQSLKPK----G---YVVAVTGDGTNDAPAP  280 (358)
Q Consensus       246 a~~~P-~~K~~iv~~l~~~----g---~~v~~vGDG~ND~~al  280 (358)
                      .++.| -=|..+++.+++.    |   ..|.++|||.||-...
T Consensus       143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~  185 (234)
T PF06888_consen  143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA  185 (234)
T ss_pred             CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence            34444 3599999988754    4   6899999999996543

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	358
3ixz_A	1034	Pig Gastric H+K+-Atpase Complexed With Aluminium Fl		6e-21
3n23_A	992	Crystal Structure Of The High Affinity Complex Betw		2e-20
3b8e_A	998	Crystal Structure Of The Sodium-Potassium Pump Leng		2e-20
2zxe_A	1028	Crystal Structure Of The Sodium - Potassium Pump In		4e-20
2dqs_A	995	Crystal Structure Of The Calcium Pump With Amppcp I		9e-13
1kju_A	994	Ca2+-Atpase In The E2 State Length = 994		9e-13
3ba6_A	994	Structure Of The Ca2e1p Phosphoenzyme Intermediate		1e-12
3tlm_A	992	Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp		4e-12
3rfu_A	736	Crystal Structure Of A Copper-Transporting Pib-Type		1e-08
1mhs_A	920	Model Of Neurospora Crassa Proton Atpase Length = 9		6e-06
3j09_A	723	High Resolution Helical Reconstruction Of The Bacte		2e-05
3j08_A	645	High Resolution Helical Reconstruction Of The Bacte		2e-05
3b8c_A	885	Crystal Structure Of A Plasma Membrane Proton Pump		4e-05
3a1e_A	287	Crystal Structure Of The P- And N-Domains Of His462		9e-05
3a1c_A	287	Crystal Structure Of The P- And N-Domains Of Copa,		9e-05
2b8e_A	273	Copa Atp Binding Domain Length = 273		3e-04

>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 221 VIEGVQFRNLSAEEGVAKIENI--RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAP 278
           VI G+Q +++   E V  +      V AR+S   KL+ V+S +  G +VAVTGDG ND+P
Sbjct: 674 VINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSP 733
Query: 279 APKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
           A K ADIG  MGI G+  AK  +D+I++DDNF S+VT    GR + +N++K + + LT N
Sbjct: 734 ALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKN 793
Query: 339 FAAL 342
              L
Sbjct: 794 IPEL 797

>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 193 NRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEE--GVAKIENIRVTARSSV 250
           N    D+AA+    +  ++    +A   V+ G   +++++E+   + K     V AR+S 
Sbjct: 607 NETVEDIAAR--LNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSP 664
Query: 251 PDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNF 310
             KL+ V+  + +G +VAVTGDG ND+PA K ADIG  MGI G+  +K+ +D+I++DDNF
Sbjct: 665 QQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAADMILLDDNF 724
Query: 311 TSVVTDQRWGRCVNNNIQKCLQFQLTVNFAAL 342
            S+VT    GR + +N++K + + LT N   +
Sbjct: 725 ASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI 756

>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 193 NRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEE--GVAKIENIRVTARSSV 250
           N    D+AA+    +  ++    +A   V+ G   +++++E+   + K     V AR+S 
Sbjct: 613 NETVEDIAAR--LNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSP 670
Query: 251 PDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNF 310
             KL+ V+  + +G +VAVTGDG ND+PA K ADIG  MGI G+  +K+ +D+I++DDNF
Sbjct: 671 QQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAADMILLDDNF 730
Query: 311 TSVVTDQRWGRCVNNNIQKCLQFQLTVNFAAL 342
            S+VT    GR + +N++K + + LT N   +
Sbjct: 731 ASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI 762

>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 221 VIEGVQFRNLSAE--EGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAP 278
           V+ G   ++LS E  + +       V AR+S   KL+ V+  + +G +VAVTGDG ND+P
Sbjct: 669 VVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSP 728
Query: 279 APKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
           A K ADIG  MGI G+  +K+ +D+I++DDNF S+VT    GR + +N++K + + LT N
Sbjct: 729 ALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 788
Query: 339 FAAL 342
              +
Sbjct: 789 IPEI 792

>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           E  D    G +F +L   E           AR     K   V+ L+    + A+TGDG N
Sbjct: 648 EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVN 707
Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
           DAPA K A+IG  MG  GT  AK  S++++ DDNF+++V     GR + NN+++ +++ +
Sbjct: 708 DAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 766
Query: 336 TVNFAALIVNIFAA 349
           + N   ++     A
Sbjct: 767 SSNVGEVVCIFLTA 780

>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           E  D    G +F +L   E           AR     K   V+ L+    + A+TGDG N
Sbjct: 647 EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVN 706
Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
           DAPA K A+IG  MG  GT  AK  S++++ DDNF+++V     GR + NN+++ +++ +
Sbjct: 707 DAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765
Query: 336 TVNFAALIVNIFAA 349
           + N   ++     A
Sbjct: 766 SSNVGEVVCIFLTA 779

>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           E  D    G +F +L   E           AR     K   V+ L+    + A+TGDG N
Sbjct: 647 EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVN 706
Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQL 335
           DAPA K A+IG  MG  GT  AK  S++++ DDNF+++V     GR + NN+++ +++ +
Sbjct: 707 DAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765
Query: 336 TVNFAALIVNIFAA 349
           + N   ++     A
Sbjct: 766 SSNVGEVVCIFLTA 779

>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 219 DEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAP 278
           D    G +F +L   E           AR     K   V+ L+    + A+TGDG NDAP
Sbjct: 649 DRAYTGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEITAMTGDGVNDAP 708
Query: 279 APKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
           A K A+IG  MG  GT  AK  S++++ DDNF+++V     GR + NN+++ +++ ++ N
Sbjct: 709 ALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN 767
Query: 339 FAALIVNIFAA 349
              ++     A
Sbjct: 768 VGEVVCIFLTA 778

>pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 234 EGVAKIENIRVTARSSVP-DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIE 292
           E VA    I+      +P DK   V  LK KG +VA+ GDG NDAPA   ADIG  MG  
Sbjct: 585 EAVAGTLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-T 643
Query: 293 GTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVN 338
           GT  A E + + ++  +   +   +R      +NI++ L F    N
Sbjct: 644 GTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYN 689

>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 256 TVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTK-WAKEGSDIIIMDDNFTSVV 314
            V+ L+ +GY+VA+TGDG NDAP+ K AD G  + +EG+   A+  +DI+ +     +++
Sbjct: 618 VVEILQQRGYLVAMTGDGVNDAPSLKKADTG--IAVEGSSDAARSAADIVFLAPGLGAII 675
Query: 315 TDQRWGRCVNNNIQKCLQFQLTVNF 339
              +  R + + +   + +++ ++ 
Sbjct: 676 DALKTSRQIFHRMYAYVVYRIALSI 700

>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 257 VQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD 316
           V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+   VV  
Sbjct: 590 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA 647
Query: 317 QRWGRCVNNNIQKCLQFQLTVNF------AALIVNIFAAVQKFR 354
            +  R   + I++ + + L  N       A L+  IF  V  FR
Sbjct: 648 IQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVV--FR 689

>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 266 VVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNN 325
           VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+   VV   +  R   +
Sbjct: 520 VVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMS 578
Query: 326 NIQKCLQFQLTVNF------AALIVNIFAAVQKFR 354
            I++ + + L  N       A L+  IF  V  FR
Sbjct: 579 KIKQNIFWALIYNVILIPAAAGLLYPIFGVV--FR 611

>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 253 KLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS 312
           K   V+ L+ + ++V +TGDG NDAPA K ADIG  +  + T  A+  SDI++ +   + 
Sbjct: 569 KYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSV 627
Query: 313 VVTDQRWGRCVNNNIQKCLQFQLTVNF 339
           +++     R +   ++    + +++  
Sbjct: 628 IISAVLTSRAIFQRMKNYTIYAVSITI 654

>pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 257 VQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD 316
           V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+   VV  
Sbjct: 218 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA 275
Query: 317 QRWGRCVNNNIQ 328
            +  R   + I+
Sbjct: 276 IQLSRKTMSKIK 287

>pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 257 VQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD 316
           V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+   VV  
Sbjct: 218 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA 275
Query: 317 QRWGRCVNNNIQ 328
            +  R   + I+
Sbjct: 276 IQLSRKTMSKIK 287

>pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 257 VQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTD 316
           V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+   VV  
Sbjct: 198 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA 255
Query: 317 QRWGR 321
            +  R
Sbjct: 256 IQLSR 260

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	358
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	3e-34
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	3e-04
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	5e-34
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	3e-04
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	8e-32
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	3e-24
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	4e-24
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	6e-04
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	3e-11
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	1e-09
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	4e-09
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	1e-08
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	1e-08
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	4e-08

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034

 Score =  133 bits (336), Expect = 3e-34
 Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 11/184 (5%)

Query: 173 ITG--SPTEKAILSWAVFDLGM--NRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFR 228
           +TG    T KAI   A   +G+    + T     +   +   +    +A   VI G+Q +
Sbjct: 626 VTGDHPITAKAI---AA-SVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681

Query: 229 NLSAEEGVAKIENIRVT--ARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG 286
           ++   E V  +        AR+S   KL+ V+S +  G +VAVTGDG ND+PA K ADIG
Sbjct: 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741

Query: 287 PWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNI 346
             MGI G+  AK  +D+I++DDNF S+VT    GR + +N++K + + LT N   L    
Sbjct: 742 VAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTP-Y 800

Query: 347 FAAV 350
              +
Sbjct: 801 LIYI 804

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 60  TGDQIPADGLFLNGHSLKVDECSMTGE 86
            GD++PAD   L     KVD  S+TGE
Sbjct: 205 GGDRVPADIRILQAQGRKVDNSSLTGE 231

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028

 Score =  131 bits (333), Expect = 5e-34
 Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 11/184 (5%)

Query: 173 ITG--SPTEKAILSWAVFDLGM--NRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFR 228
           +TG    T KAI   A   +G+    N T     +   +   +    +A   V+ G   +
Sbjct: 621 VTGDHPITAKAI---AK-GVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676

Query: 229 NLSAEEGVAKIENIR--VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG 286
           +LS E     +      V AR+S   KL+ V+  + +G +VAVTGDG ND+PA K ADIG
Sbjct: 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 736

Query: 287 PWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNI 346
             MGI G+  +K+ +D+I++DDNF S+VT    GR + +N++K + + LT N   +    
Sbjct: 737 VAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP-F 795

Query: 347 FAAV 350
              +
Sbjct: 796 LVFI 799

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 14/27 (51%), Positives = 18/27 (66%)

Query: 60  TGDQIPADGLFLNGHSLKVDECSMTGE 86
            GD+IPAD   ++ H  KVD  S+TGE
Sbjct: 200 GGDRIPADLRIISAHGCKVDNSSLTGE 226

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995

 Score =  125 bits (317), Expect = 8e-32
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 215 AEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGT 274
            E  D    G +F +L   E           AR     K   V+ L+    + A+TGDG 
Sbjct: 647 EEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706

Query: 275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQ 334
           NDAPA K A+IG  MG  GT  AK  S++++ DDNF+++V     GR + NN+++ +++ 
Sbjct: 707 NDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 765

Query: 335 LTVNFAALIVNIFAAV 350
           ++ N   ++  IF   
Sbjct: 766 ISSNVGEVVC-IFLTA 780

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920

 Score =  103 bits (258), Expect = 3e-24
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDA 277
           + E +      ++   E    +E     A      K   V+ L+ +GY+VA+TGDG NDA
Sbjct: 580 NAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDA 639

Query: 278 PAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTV 337
           P+ K AD G  +    +  A+  +DI+ +     +++   +  R + + +   + +++ +
Sbjct: 640 PSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIAL 698

Query: 338 NFAALIV 344
           +    I 
Sbjct: 699 SIHLEIF 705

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score =  102 bits (257), Expect = 4e-24
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDA 277
              ++   +  NL++      IE     A      K   V+ L+ + ++V +TGDG NDA
Sbjct: 534 SSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDA 593

Query: 278 PAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTV 337
           PA K ADIG  +  + T  A+  SDI++ +   + +++     R +   ++    + +++
Sbjct: 594 PALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 652

Query: 338 NFAALIVNIFAAV 350
               +   +  A+
Sbjct: 653 TIRIVFGFMLIAL 665

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 61  GDQIPADGLFLNGHSLKVDECSMTGE 86
           GD IPAD   L G  LKVD+ ++TGE
Sbjct: 159 GDIIPADARLLEGDPLKVDQSALTGE 184

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263

 Score = 62.1 bits (152), Expect = 3e-11
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DK+  ++ LK  G  V + GDG NDA A  +AD+   MG  G   +K  +DII++ ++  
Sbjct: 186 DKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIG 244

Query: 312 SVVTDQRWGRCVNNNI 327
           +++   +  + ++N I
Sbjct: 245 TLLGLIKNRKRLSNAI 260

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736

 Score = 58.7 bits (143), Expect = 1e-09
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           DK   V  LK KG +VA+ GDG NDAPA   ADIG  MG  GT  A E + + ++  +  
Sbjct: 604 DKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLR 662

Query: 312 SVVTDQRWGRCVNNNI 327
            +   +R      +NI
Sbjct: 663 GIAKARRLSESTMSNI 678

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280

 Score = 55.9 bits (136), Expect = 4e-09
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
           +K   V+ ++ + YV A+ GDG NDAPA   AD+G  +G  GT  A E +DI+++ ++  
Sbjct: 194 EKAEKVKEVQ-QKYVTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPR 251

Query: 312 SVVTDQRWGRCVNNNI 327
            V       R   +  
Sbjct: 252 DVAAIVELSRKTYSKF 267

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287

 Score = 54.8 bits (133), Expect = 1e-08
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
            K   V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+  
Sbjct: 213 QKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLR 270

Query: 312 SVVTDQRWGRCVNNNI 327
            VV   +  R   + I
Sbjct: 271 DVVAAIQLSRKTMSKI 286

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645

 Score = 55.6 bits (135), Expect = 1e-08
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
            K   V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+  
Sbjct: 507 QKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLR 564

Query: 312 SVVTDQRWGRCVNNNI 327
            VV   +  R   + I
Sbjct: 565 DVVAAIQLSRKTMSKI 580

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT 311
            K   V+ L+ K  VVA  GDG NDAPA   AD+G  +G  G+  A E  DI+++ D+  
Sbjct: 585 QKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLR 642

Query: 312 SVVTDQRWGRCVNNNI 327
            VV   +  R   + I
Sbjct: 643 DVVAAIQLSRKTMSKI 658

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	358
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	100.0
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	100.0
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	100.0
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	100.0
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	100.0
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	100.0
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	100.0
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	100.0
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.53
2kij_A	124	Copper-transporting ATPase 1; actuator, menkes dis	99.63
2hc8_A	113	PACS, cation-transporting ATPase, P-type; copper,	99.62
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.51
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.41
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.31
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.27
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.94
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.76
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.75
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.66
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.6
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.59
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.58
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.41
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.18
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.13
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.12
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.11
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.1
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.09
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.03
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.03
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.01
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.0
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.99
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	97.97
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.94
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	97.78
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.76
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	97.73
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.72
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.69
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.68
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.66
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.64
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.59
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.57
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.57
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.48
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	97.43
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	97.31
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.26
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.14
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	97.13
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.12
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.09
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.04
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	96.99
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	96.85
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	96.8
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	96.75
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	96.54
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.49
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.39
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.35
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	96.33
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	96.27
3fvv_A	232	Uncharacterized protein; unknown function, structu	96.06
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	95.8
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	95.78
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	95.67
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	95.62
1te2_A	226	Putative phosphatase; structural genomics, phospha	95.4
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	95.37
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	95.29
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	95.15
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	95.11
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	95.1
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	95.0
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	94.96
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	94.9
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	94.9
2hsz_A	243	Novel predicted phosphatase; structural genomics,	94.79
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	94.66
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	94.65
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	94.57
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	94.47
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	94.44
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	94.41
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	94.36
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	94.1
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	93.95
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	93.92
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	93.82
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	93.66
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	93.63
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	93.57
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	93.55
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	93.19
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	92.88
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	92.66
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	92.64
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	92.43
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	92.13
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	91.87
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	91.69
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	91.52
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	91.49
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	91.31
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	91.22
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	90.98
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	90.91
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	90.41
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	90.27
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	90.11
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	89.05
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	88.5
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	88.24
4gxt_A	385	A conserved functionally unknown protein; structur	87.96
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	87.63
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	83.96
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	82.8
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	81.5
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	80.37
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	80.29

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=100.00  E-value=3.5e-59  Score=482.12  Aligned_cols=326  Identities=23%  Similarity=0.291  Sum_probs=276.3

Q ss_pred             CCcchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc-ee------------------------CCCccCCCEE
Q 044334           16 KEGWFDGD-GVISAVLVVVIVSAVSNFKQSRQFQALANESSDI-RV------------------------TGDQIPADGL   69 (358)
Q Consensus        16 ~~~~~~~~-~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~V------------------------~G~~IPaDg~   69 (358)
                      .+.|+|++ +++++++++.+++.+++.|+++.+++|.++.++. ++                        |||+|||||+
T Consensus       184 ~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~  263 (736)
T 3rfu_A          184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGE  263 (736)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEE
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEE
Confidence            46799977 4558888889999999999999999998877432 22                        9999999999


Q ss_pred             EEeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch--------------------------
Q 044334           70 FLNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG--------------------------  112 (358)
Q Consensus        70 vl~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g--------------------------  112 (358)
                      |++| ++.||||+|||||+||.|++|+.++.|           |+++|.+|.++                          
T Consensus       264 vl~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~  342 (736)
T 3rfu_A          264 VQEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGW  342 (736)
T ss_dssp             ECSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHH
T ss_pred             EEEC-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Confidence            9999 679999999999999999999887665           99999999988                          


Q ss_pred             ---------hHHhhhcccccc--hHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHH
Q 044334          113 ---------NREFLGTNTKVD--DVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEA  153 (358)
Q Consensus       113 ---------~~~~~~~~~~~~--~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~  153 (358)
                               +..|..++..+.  .+..++..++++++++|||+|++++                            .++.
T Consensus       343 ~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~  422 (736)
T 3rfu_A          343 FVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT  422 (736)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCE
Confidence                     111222222221  3678899999999999999999998                            3567


Q ss_pred             HhhCceeeEeecCCCCce-------------------eEcCCccHHHHHHHHHHhcCCCCCc------------------
Q 044334          154 VGLNTICNVYKSNSESTT-------------------EITGSPTEKAILSWAVFDLGMNRNN------------------  196 (358)
Q Consensus       154 ~~l~~t~t~~~~~~~~~~-------------------~~~g~~~e~all~~a~~~~~~~~~~------------------  196 (358)
                      +++|||||+|+++..-..                   ....||.+.|++++++ +.+.....                  
T Consensus       423 i~fDKTGTLT~g~~~v~~i~~~~~~~~~~l~~aa~le~~s~hPla~Aiv~~a~-~~~~~~~~~~~f~~~~g~gv~~~~~g  501 (736)
T 3rfu_A          423 LVVDKTGTLTEGHPKLTRIVTDDFVEDNALALAAALEHQSEHPLANAIVHAAK-EKGLSLGSVEAFEAPTGKGVVGQVDG  501 (736)
T ss_dssp             EEECCBTTTBCSSCEEEEEEESSSCHHHHHHHHHHHHHSSCCHHHHHHHHHHH-TTCCCCCCCSCCCCCTTTEEEECSSS
T ss_pred             EEEeCCCCCcCCceEEEEEEecCCCHHHHHHHHHHHhhcCCChHHHHHHHHHH-hcCCCccCcccccccCCceEEEEECC
Confidence            899999999987531000                   1235899999999988 65543211                  


Q ss_pred             -------------------------hHHHhccCceEEEEeecccc-----------------------C-Cceeeecccc
Q 044334          197 -------------------------TDVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQF  227 (358)
Q Consensus       197 -------------------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~  227 (358)
                                               ++++++|+|+++++++....                       + +..++|||+.
T Consensus       502 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~  581 (736)
T 3rfu_A          502 HHVAIGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSK  581 (736)
T ss_dssp             SCEEEESHHHHHHHCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCH
T ss_pred             EEEEEcCHHHHHHcCCChhHHHHHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCH
Confidence                                     35678999999999875432                       3 6789999997


Q ss_pred             cccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeC
Q 044334          228 RNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMD  307 (358)
Q Consensus       228 ~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~  307 (358)
                      .  ..+.+++.++...++++++|+||.++++.||++|+.|+|+|||.||+|||+.||+||+|| +|++.++++||+++++
T Consensus       582 ~--~a~~ia~~lgi~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~  658 (736)
T 3rfu_A          582 R--TAEAVAGTLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLH  658 (736)
T ss_dssp             H--HHHHHHHHHTCCCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECS
T ss_pred             H--HHHHHHHHcCCCEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEcc
Confidence            7  667899999999999999999999999999999999999999999999999999999999 9999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          308 DNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNI  346 (358)
Q Consensus       308 ~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~  346 (358)
                      +++.++++++++||+++++|+||+.|++.||++.+++++
T Consensus       659 ~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa  697 (736)
T 3rfu_A          659 GDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA  697 (736)
T ss_dssp             CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999987

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=100.00  E-value=3.7e-57  Score=475.32  Aligned_cols=334  Identities=20%  Similarity=0.288  Sum_probs=275.2

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEEe
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFLN   72 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl~   72 (358)
                      ++|.|++.|+++++++..+++++++|+++.+++|+++. ++++|                       +||+|||||+|++
T Consensus       139 g~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~  218 (920)
T 1mhs_A          139 EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVT  218 (920)
T ss_dssp             SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEE
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEe
Confidence            57999999999999999999999999999999998876 55555                       9999999999999


Q ss_pred             eCc-eEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch----------------------------
Q 044334           73 GHS-LKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG----------------------------  112 (358)
Q Consensus        73 g~~-~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g----------------------------  112 (358)
                      |.. +.||||+|||||.||.|.+||.++.|           |++||.+|.+|                            
T Consensus       219 g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~  298 (920)
T 1mhs_A          219 DDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILL  298 (920)
T ss_dssp             ESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred             cCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHH
Confidence            963 79999999999999999998876665           99999999998                            


Q ss_pred             -------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhC
Q 044334          113 -------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLN  157 (358)
Q Consensus       113 -------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~  157 (358)
                             ...|..++..+.++..++.+++++++++|||+||+++                            -++.+|+|
T Consensus       299 ~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~D  378 (920)
T 1mhs_A          299 ILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSD  378 (920)
T ss_dssp             HHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEEC
Confidence                   1122233344567889999999999999999999988                            35568999


Q ss_pred             ceeeEeecCCCCc----------------------eeE-cCCccHHHHHHHHHHhcCCCC------Cc------------
Q 044334          158 TICNVYKSNSEST----------------------TEI-TGSPTEKAILSWAVFDLGMNR------NN------------  196 (358)
Q Consensus       158 ~t~t~~~~~~~~~----------------------~~~-~g~~~e~all~~a~~~~~~~~------~~------------  196 (358)
                      ||||+|+++..-.                      ... .+||+|.|+++++. +.+...      ..            
T Consensus       379 KTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~-~~~~~~~~~~~~~~~~~~pF~s~~k~  457 (920)
T 1mhs_A          379 KTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLK-YYPRAKSVLSKYKVLQFHPFDPVSKK  457 (920)
T ss_dssp             TBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHH-HSSSCCGGGSCCCEEEEEEEETTTTE
T ss_pred             CCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHH-hcccchhhccccceeEEeeccCCCCe
Confidence            9999998742100                      000 13999999999886 442110      00            


Q ss_pred             ---------------------------------------------hHHHhccCceEEEEeecccc---------------
Q 044334          197 ---------------------------------------------TDVAAKSLRCMAFARTKVAE---------------  216 (358)
Q Consensus       197 ---------------------------------------------~~~a~~G~rvl~~a~~~~~~---------------  216 (358)
                                                                   ++++++|+|++++|++..+.               
T Consensus       458 ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R  537 (920)
T 1mhs_A          458 VVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPR  537 (920)
T ss_dssp             EEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCC
T ss_pred             EEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccccccEEEEEEEEecccc
Confidence                                                         24567899999999985211               


Q ss_pred             -------------C-Cceeeecccccccchhhhhhccccc-----------------------------eeeecCChhhH
Q 044334          217 -------------A-DDEVIEGVQFRNLSAEEGVAKIENI-----------------------------RVTARSSVPDK  253 (358)
Q Consensus       217 -------------~-~~~~ltGd~~~~~~~~~~~~~~~~~-----------------------------~v~a~~~P~~K  253 (358)
                                   + +..|+|||+..  ++.++++.++..                             .+|+|++|+||
T Consensus       538 ~ea~~aI~~l~~aGI~v~MiTGD~~~--TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~K  615 (920)
T 1mhs_A          538 HDTYKTVCEAKTLGLSIKMLTGDAVG--IARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHK  615 (920)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESSCHH--HHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTHH
T ss_pred             ccHHHHHHHHhhcCceEEEEcCCCHH--HHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHHH
Confidence                         3 77999999965  555566655543                             58999999999


Q ss_pred             HHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 044334          254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQF  333 (358)
Q Consensus       254 ~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~  333 (358)
                      .++|+.||++|+.|+|+|||.||+|||++||+||+|| +|+++++++||++++++++++|++++++||++|+|+++++.|
T Consensus       616 ~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~  694 (920)
T 1mhs_A          616 YNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY  694 (920)
T ss_dssp             HHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999 899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH-HHHHHHHhhccC
Q 044334          334 QLTVNFAAL-IVNIFAAVQKFR  354 (358)
Q Consensus       334 ~~~~n~~~~-~~~~~g~~~~~~  354 (358)
                      .++.|+... .+.++..+++++
T Consensus       695 ~l~~n~~~~~~~~~~~~~~~~~  716 (920)
T 1mhs_A          695 RIALSIHLEIFLGLWIAILNRS  716 (920)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc
Confidence            999999763 333434455554

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=100.00  E-value=7.6e-56  Score=459.01  Aligned_cols=327  Identities=23%  Similarity=0.299  Sum_probs=273.7

Q ss_pred             chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-cee-----------------------CCCccCCCEEEEee
Q 044334           19 WFD-GDGVISAVLVVVIVSAVSNFKQSRQFQALANESSD-IRV-----------------------TGDQIPADGLFLNG   73 (358)
Q Consensus        19 ~~~-~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~V-----------------------~G~~IPaDg~vl~g   73 (358)
                      |+| +++++++++++.+++.+++.|+++.+++|.++.++ ++|                       |||+|||||+|++|
T Consensus       173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G  252 (723)
T 3j09_A          173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG  252 (723)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence            666 55577777788899999999998999999877643 333                       99999999999999


Q ss_pred             CceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch------------------------------
Q 044334           74 HSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG------------------------------  112 (358)
Q Consensus        74 ~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g------------------------------  112 (358)
                       ++.||||+|||||.||.|++|+.++.|           |+++|.+|.++                              
T Consensus       253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~  331 (723)
T 3j09_A          253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT  331 (723)
T ss_dssp             -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred             -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence             689999999999999999999876655           99999999888                              


Q ss_pred             -----hHHhhhcccc-cchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhCc
Q 044334          113 -----NREFLGTNTK-VDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLNT  158 (358)
Q Consensus       113 -----~~~~~~~~~~-~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~~  158 (358)
                           +..+..++.. +.++..++..++++++++|||+|++++                            .++.+++||
T Consensus       332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK  411 (723)
T 3j09_A          332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK  411 (723)
T ss_dssp             HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred             HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence                 1111122222 345667889999999999999999998                            356789999


Q ss_pred             eeeEeecCCCCce-------------------eEcCCccHHHHHHHHHHhcCCCCCc-----------------------
Q 044334          159 ICNVYKSNSESTT-------------------EITGSPTEKAILSWAVFDLGMNRNN-----------------------  196 (358)
Q Consensus       159 t~t~~~~~~~~~~-------------------~~~g~~~e~all~~a~~~~~~~~~~-----------------------  196 (358)
                      |||+|+++..-..                   ....||.+.|+++++. +.+.....                       
T Consensus       412 TGTLT~g~~~v~~~~~~~~~~~~~l~~aa~~e~~s~hP~~~Ai~~~a~-~~~~~~~~~~~~~~~~g~g~~~~~~~~g~~~  490 (723)
T 3j09_A          412 TGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKAL-EHGIELGEPEKVEVIAGEGVVADGILVGNKR  490 (723)
T ss_dssp             HHHTSCSCCEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHH-HTTCCCCSCCCCEEETTTEEEETTEEEECHH
T ss_pred             CCccccCceEEEEEEeCCCCHHHHHHHHHHHhccCCCchhHHHHHHHH-hcCCCcCCccceEEecCCceEEEEEEECCHH
Confidence            9999997532100                   1235889999999988 66543211                       


Q ss_pred             -----------------hHHHhccCceEEEEeecccc-----------------------C-Cceeeecccccccchhhh
Q 044334          197 -----------------TDVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNLSAEEG  235 (358)
Q Consensus       197 -----------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~~~~~~  235 (358)
                                       ++++++|+|++.++++....                       + +..++|||+..  ..+.+
T Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~--~a~~i  568 (723)
T 3j09_A          491 LMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR--SAEAI  568 (723)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHH
T ss_pred             HHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHH--HHHHH
Confidence                             34677899999998865421                       3 67899999977  67788


Q ss_pred             hhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHH
Q 044334          236 VAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       236 ~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      ++.++...++++++|+||.++++.+|++ +.|+|+|||.||+|||+.||+||+|| +|++.++++||++++++++..+++
T Consensus       569 a~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~  646 (723)
T 3j09_A          569 SRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVA  646 (723)
T ss_dssp             HHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHH
T ss_pred             HHHcCCcEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHH
Confidence            9999999999999999999999999988 89999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          316 DQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       316 ~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      ++++||++++++++|+.|+++||++.++++++|+.+
T Consensus       647 ~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~  682 (723)
T 3j09_A          647 AIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYP  682 (723)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999988444

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=100.00  E-value=4.7e-54  Score=460.96  Aligned_cols=336  Identities=26%  Similarity=0.339  Sum_probs=275.0

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEE
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFL   71 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl   71 (358)
                      ...|++++.|+++++++..++++|++|+++.+++|+++. ++++|                       +||+|||||+|+
T Consensus       137 ~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll  216 (1034)
T 3ixz_A          137 DDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRIL  216 (1034)
T ss_pred             ccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEE
Confidence            356899999999999999999999999999999999987 55655                       999999999999


Q ss_pred             eeCceEEecCCCcCCCcceeeecCCc----------eEEE-----------Eeeecccccch------------------
Q 044334           72 NGHSLKVDECSMTGETDRWLWLRARH----------FCWN-----------EHCLGTRDEMG------------------  112 (358)
Q Consensus        72 ~g~~~~vDes~lTGEs~Pv~k~~~~~----------~~~~-----------V~~~G~~T~~g------------------  112 (358)
                      +|.++.||||+|||||.||.|.+++.          .+.|           |++||.+|.+|                  
T Consensus       217 ~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~  296 (1034)
T 3ixz_A          217 QAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAI  296 (1034)
T ss_pred             EeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCcHHH
Confidence            99778999999999999999986521          1222           99999999988                  


Q ss_pred             -----------------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH--------------------------
Q 044334          113 -----------------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL--------------------------  149 (358)
Q Consensus       113 -----------------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~--------------------------  149 (358)
                                       +..|..++..+.++...+..++++++++|||+||+++                          
T Consensus       297 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~  376 (1034)
T 3ixz_A          297 EIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVET  376 (1034)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHh
Confidence                             1112222334567889999999999999999999998                          


Q ss_pred             --HHHHHhhCceeeEeecCCC-------------------------------------------------------Ccee
Q 044334          150 --LQEAVGLNTICNVYKSNSE-------------------------------------------------------STTE  172 (358)
Q Consensus       150 --~~~~~~l~~t~t~~~~~~~-------------------------------------------------------~~~~  172 (358)
                        -++.+|+|||||+|+++..                                                       ..+.
T Consensus       377 LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~  456 (1034)
T 3ixz_A          377 LGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRI  456 (1034)
T ss_pred             hcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCce
Confidence              3667899999999976210                                                       0123


Q ss_pred             EcCCccHHHHHHHHHHhcCCCCC--------------------------------c------------------------
Q 044334          173 ITGSPTEKAILSWAVFDLGMNRN--------------------------------N------------------------  196 (358)
Q Consensus       173 ~~g~~~e~all~~a~~~~~~~~~--------------------------------~------------------------  196 (358)
                      ..|||+|.|++++++ +.+.+..                                .                        
T Consensus       457 ~~gdp~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~  535 (1034)
T 3ixz_A          457 VIGDASETALLKFSE-LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKG  535 (1034)
T ss_pred             eccCchHHHHHHHHH-HhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCC
Confidence            568999999999987 5321100                                0                        


Q ss_pred             -----------------hHHHhccCceEEEEeeccc-------------------c------------------------
Q 044334          197 -----------------TDVAAKSLRCMAFARTKVA-------------------E------------------------  216 (358)
Q Consensus       197 -----------------~~~a~~G~rvl~~a~~~~~-------------------~------------------------  216 (358)
                                       .+++.+|+||+++|++..+                   .                        
T Consensus       536 ~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~  615 (1034)
T 3ixz_A          536 QELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLK  615 (1034)
T ss_pred             ceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHH
Confidence                             4577899999999997532                   0                        


Q ss_pred             ----C-Cceeeecccccccchhhhhhcccc--------------------------------------------------
Q 044334          217 ----A-DDEVIEGVQFRNLSAEEGVAKIEN--------------------------------------------------  241 (358)
Q Consensus       217 ----~-~~~~ltGd~~~~~~~~~~~~~~~~--------------------------------------------------  241 (358)
                          + +..++|||+..  ++..+++.++.                                                  
T Consensus       616 l~~aGI~vvmiTGd~~~--tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~  693 (1034)
T 3ixz_A          616 CRTAGIRVIMVTGDHPI--TAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALR  693 (1034)
T ss_pred             HHHcCCeEEEEeCCCHH--HHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHH
Confidence                3 67889999864  22233322221                                                  


Q ss_pred             ---ceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          242 ---IRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       242 ---~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                         ..+|+|++|+||.++++.+|+.|+.|+|+|||.||+|||+.||+|||||.+|++.+|++||+++.++++.++.++++
T Consensus       694 ~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~  773 (1034)
T 3ixz_A          694 THPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVE  773 (1034)
T ss_pred             hCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence               23899999999999999999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          319 WGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       319 ~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      +||++|+|+++++.|.+++|+..+...+++.+++++
T Consensus       774 ~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~  809 (1034)
T 3ixz_A          774 QGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVP  809 (1034)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999999988777766665543

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=100.00  E-value=5.2e-57  Score=474.05  Aligned_cols=324  Identities=22%  Similarity=0.293  Sum_probs=266.1

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEE
Q 044334           15 PKEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLF   70 (358)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~v   70 (358)
                      ...+|+|++.|+++++++..++.++++|+++.+++|.++. ++++|                       +||+|||||+|
T Consensus        89 ~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~l  168 (885)
T 3b8c_A           89 RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARL  168 (885)
T ss_dssp             SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCC
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEE
Confidence            4458999999999999999999999999999999998776 45544                       99999999999


Q ss_pred             EeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch---------------------hHHh--
Q 044334           71 LNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG---------------------NREF--  116 (358)
Q Consensus        71 l~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g---------------------~~~~--  116 (358)
                      ++|+++.||||+|||||.||.|.+||.++.|           |++||.+|.+|                     +..+  
T Consensus       169 l~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~  248 (885)
T 3b8c_A          169 LEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCI  248 (885)
T ss_dssp             CCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHH
T ss_pred             EEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHHHHHHH
Confidence            9996668999999999999999999887776           99999999998                     1101  


Q ss_pred             ------------hhcccccchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhh
Q 044334          117 ------------LGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGL  156 (358)
Q Consensus       117 ------------~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l  156 (358)
                                  ..++..+.++..++..++++++++|||+||+++                            -++.+|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~  328 (885)
T 3b8c_A          249 CSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS  328 (885)
T ss_dssp             HHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEE
Confidence                        111222346677899999999999999999888                            3567899


Q ss_pred             CceeeEeecCCCCc--e--------------------e--EcCCccHHHHHHHHHHhc-----CCC------CCc-----
Q 044334          157 NTICNVYKSNSEST--T--------------------E--ITGSPTEKAILSWAVFDL-----GMN------RNN-----  196 (358)
Q Consensus       157 ~~t~t~~~~~~~~~--~--------------------~--~~g~~~e~all~~a~~~~-----~~~------~~~-----  196 (358)
                      |||||+|+++..-.  .                    .  ..+||+|.|++.++. +.     +..      ++.     
T Consensus       329 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~-~~~~~~~~~~~~~~~pF~s~~k~~  407 (885)
T 3b8c_A          329 DKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLA-DPKEARAGIREVHFLPFNPVDKRT  407 (885)
T ss_dssp             ECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTC-CTTCCCCSSCCBCCCCCCTTTCCC
T ss_pred             CCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhh-chhhHhhcCceeecccCCcccceE
Confidence            99999998752110  0                    0  147899999998764 20     000      000     


Q ss_pred             ----------------------------------------hHHHhccCceEEEEeeccc-----------c---------
Q 044334          197 ----------------------------------------TDVAAKSLRCMAFARTKVA-----------E---------  216 (358)
Q Consensus       197 ----------------------------------------~~~a~~G~rvl~~a~~~~~-----------~---------  216 (358)
                                                              ++++++|+|++++|+++.+           .         
T Consensus       408 sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~D  487 (885)
T 3b8c_A          408 ALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFD  487 (885)
T ss_dssp             CCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECC
T ss_pred             EEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeec
Confidence                                                    3567899999999998431           0         


Q ss_pred             ----------------C-Cceeeecccccccchhhhhhcccc------------------------------ceeeecCC
Q 044334          217 ----------------A-DDEVIEGVQFRNLSAEEGVAKIEN------------------------------IRVTARSS  249 (358)
Q Consensus       217 ----------------~-~~~~ltGd~~~~~~~~~~~~~~~~------------------------------~~v~a~~~  249 (358)
                                      + +..|+|||+..  ++.++++.++.                              ..+|+|++
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~--tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~  565 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLA--IGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVF  565 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHH--HHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCC
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChH--HHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEEC
Confidence                            3 78999999965  44455554443                              24899999


Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQK  329 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~  329 (358)
                      |+||.++|+.||++|+.|+|+|||.||+|||++||+||+|| +|+++++++||+++.++++++|++++++||++|+|+++
T Consensus       566 P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~  644 (885)
T 3b8c_A          566 PEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKN  644 (885)
T ss_dssp             HHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999 89999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 044334          330 CLQFQLTVNFAAL  342 (358)
Q Consensus       330 ~i~~~~~~n~~~~  342 (358)
                      |+.|++++|+..+
T Consensus       645 ~i~~~l~~n~~~~  657 (885)
T 3b8c_A          645 YTIYAVSITIRIV  657 (885)
T ss_dssp             HHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998643

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=100.00  E-value=5.4e-56  Score=454.51  Aligned_cols=327  Identities=23%  Similarity=0.298  Sum_probs=272.4

Q ss_pred             chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-Ccee-----------------------CCCccCCCEEEEee
Q 044334           19 WFD-GDGVISAVLVVVIVSAVSNFKQSRQFQALANESS-DIRV-----------------------TGDQIPADGLFLNG   73 (358)
Q Consensus        19 ~~~-~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~V-----------------------~G~~IPaDg~vl~g   73 (358)
                      |+| ++.++++++++.+++.+++.|+++.+++|.++.+ +++|                       |||+|||||+|++|
T Consensus        95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G  174 (645)
T 3j08_A           95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG  174 (645)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence            666 5567777778888999998888888899887764 3333                       99999999999999


Q ss_pred             CceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch------------------------------
Q 044334           74 HSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG------------------------------  112 (358)
Q Consensus        74 ~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g------------------------------  112 (358)
                       ++.||||+|||||.||.|++|+.++.|           |+++|.+|.++                              
T Consensus       175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~  253 (645)
T 3j08_A          175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT  253 (645)
T ss_dssp             -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence             689999999999999999999876655           99999999888                              


Q ss_pred             -----hHHhhhcccc-cchHHHHHHHHHHHHHhhcCCchhHHH----------------------------HHHHHhhCc
Q 044334          113 -----NREFLGTNTK-VDDVIYIIAAAVTIIVVAIPEGLPLAL----------------------------LQEAVGLNT  158 (358)
Q Consensus       113 -----~~~~~~~~~~-~~~~~~~~~~~~~~lv~a~P~~L~la~----------------------------~~~~~~l~~  158 (358)
                           +..+..++.. +.++..++..++++++++|||+|++++                            .++.+++||
T Consensus       254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK  333 (645)
T 3j08_A          254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK  333 (645)
T ss_dssp             HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred             HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence                 1111122222 334566788899999999999999998                            356789999


Q ss_pred             eeeEeecCCCCce-------------------eEcCCccHHHHHHHHHHhcCCCCCc-----------------------
Q 044334          159 ICNVYKSNSESTT-------------------EITGSPTEKAILSWAVFDLGMNRNN-----------------------  196 (358)
Q Consensus       159 t~t~~~~~~~~~~-------------------~~~g~~~e~all~~a~~~~~~~~~~-----------------------  196 (358)
                      |||+|+++..-..                   ....||.+.|+++++. +.+.+...                       
T Consensus       334 TGTLT~~~~~v~~~~~~~~~~~~~l~~aa~~e~~s~hPla~Aiv~~a~-~~g~~~~~~~~~~~~~g~g~~~~~v~~g~~~  412 (645)
T 3j08_A          334 TGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKAL-EHGIELGEPEKVEVIAGEGVVADGILVGNKR  412 (645)
T ss_dssp             GGTSSSSCCEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHH-HTTCCCCSCCCCEEETTTEEEETTEEEECHH
T ss_pred             cccccCCCeEEEEEEeCCCCHHHHHHHHHHHhhcCCChhHHHHHHHHH-hcCCCcCCccceEEecCCceEEEEEEECCHH
Confidence            9999987532100                   1235889999999988 66543211                       


Q ss_pred             -----------------hHHHhccCceEEEEeecccc-----------------------C-Cceeeecccccccchhhh
Q 044334          197 -----------------TDVAAKSLRCMAFARTKVAE-----------------------A-DDEVIEGVQFRNLSAEEG  235 (358)
Q Consensus       197 -----------------~~~a~~G~rvl~~a~~~~~~-----------------------~-~~~~ltGd~~~~~~~~~~  235 (358)
                                       ++++++|+|++.++++....                       + +..++|||+..  ..+.+
T Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~--~a~~i  490 (645)
T 3j08_A          413 LMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR--SAEAI  490 (645)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHH
T ss_pred             HHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHH--HHHHH
Confidence                             34677899999998865421                       3 67899999977  66788


Q ss_pred             hhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHH
Q 044334          236 VAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       236 ~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      ++.++...++++++|++|.++++.++++ +.|+|+|||.||+|||+.||+||+|| ++++.++++||++++++++..+++
T Consensus       491 a~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~  568 (645)
T 3j08_A          491 SRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVA  568 (645)
T ss_dssp             HHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHH
T ss_pred             HHHcCCCEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHH
Confidence            9999999999999999999999999988 89999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044334          316 DQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQ  351 (358)
Q Consensus       316 ~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~  351 (358)
                      ++++||+++++++||+.|+++||++.++++++|+.+
T Consensus       569 ~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~  604 (645)
T 3j08_A          569 AIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYP  604 (645)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence            999999999999999999999999999999877443

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=100.00  E-value=4.1e-54  Score=460.89  Aligned_cols=336  Identities=26%  Similarity=0.353  Sum_probs=273.8

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCcee-----------------------CCCccCCCEEEE
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIRV-----------------------TGDQIPADGLFL   71 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~V-----------------------~G~~IPaDg~vl   71 (358)
                      .++|++++.++++++++..++++|++|+++.+++|+++. ++++|                       +||+|||||+|+
T Consensus       132 ~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll  211 (1028)
T 2zxe_A          132 NDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRII  211 (1028)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEE
Confidence            356889999999999999999999999999999998876 44444                       999999999999


Q ss_pred             eeCceEEecCCCcCCCcceeeecCCc---------eEEE------------Eeeecccccch------------------
Q 044334           72 NGHSLKVDECSMTGETDRWLWLRARH---------FCWN------------EHCLGTRDEMG------------------  112 (358)
Q Consensus        72 ~g~~~~vDes~lTGEs~Pv~k~~~~~---------~~~~------------V~~~G~~T~~g------------------  112 (358)
                      +|+++.||||+|||||.||.|.+++.         ++++            |++||.+|.+|                  
T Consensus       212 ~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~  291 (1028)
T 2zxe_A          212 SAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAI  291 (1028)
T ss_dssp             EEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHH
T ss_pred             eeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHH
Confidence            99668999999999999999997652         2222            99999999998                  


Q ss_pred             -----------------hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH--------------------------
Q 044334          113 -----------------NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL--------------------------  149 (358)
Q Consensus       113 -----------------~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~--------------------------  149 (358)
                                       +..|...++.+.+|...+.+++++++++|||+||+++                          
T Consensus       292 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~  371 (1028)
T 2zxe_A          292 EIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET  371 (1028)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhh
Confidence                             0111112223457888999999999999999999998                          


Q ss_pred             --HHHHHhhCceeeEeecCCC-------C------------------------------------------------cee
Q 044334          150 --LQEAVGLNTICNVYKSNSE-------S------------------------------------------------TTE  172 (358)
Q Consensus       150 --~~~~~~l~~t~t~~~~~~~-------~------------------------------------------------~~~  172 (358)
                        -++.+|+|||||+|+++..       +                                                .+.
T Consensus       372 Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~  451 (1028)
T 2zxe_A          372 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRS  451 (1028)
T ss_dssp             HHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSC
T ss_pred             hcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccce
Confidence              3556899999999976310       0                                                012


Q ss_pred             EcCCccHHHHHHHHHHhcCC----------------------------------CCCc----------------------
Q 044334          173 ITGSPTEKAILSWAVFDLGM----------------------------------NRNN----------------------  196 (358)
Q Consensus       173 ~~g~~~e~all~~a~~~~~~----------------------------------~~~~----------------------  196 (358)
                      ..|||+|.|++++++ +.+.                                  +...                      
T Consensus       452 ~~gdp~E~Al~~~a~-~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g  530 (1028)
T 2zxe_A          452 VAGDASESALLKCIE-LCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNG  530 (1028)
T ss_dssp             EESCHHHHHHHHHHH-HHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTT
T ss_pred             eCCCchHHHHHHHHH-HhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCC
Confidence            468999999999987 4310                                  0000                      


Q ss_pred             -----------------hHHHhccCceEEEEeeccc--------------------c-----------------------
Q 044334          197 -----------------TDVAAKSLRCMAFARTKVA--------------------E-----------------------  216 (358)
Q Consensus       197 -----------------~~~a~~G~rvl~~a~~~~~--------------------~-----------------------  216 (358)
                                       ++++++|+||+++|+++++                    +                       
T Consensus       531 ~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~  610 (1028)
T 2zxe_A          531 AEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGK  610 (1028)
T ss_dssp             BCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHH
Confidence                             4578899999999986431                    1                       


Q ss_pred             ----C-Cceeeecccccccchhhhhhccccc-------------------------------------------------
Q 044334          217 ----A-DDEVIEGVQFRNLSAEEGVAKIENI-------------------------------------------------  242 (358)
Q Consensus       217 ----~-~~~~ltGd~~~~~~~~~~~~~~~~~-------------------------------------------------  242 (358)
                          + +..|+|||+..  ++..+++.++..                                                 
T Consensus       611 l~~aGI~v~miTGD~~~--tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~  688 (1028)
T 2zxe_A          611 CRSAGIKVIMVTGDHPI--TAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILH  688 (1028)
T ss_dssp             HHHTTCEEEEECSSCHH--HHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHH
T ss_pred             HHHcCCEEEEECCCCHH--HHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHh
Confidence                3 67899999865  344444444322                                                 


Q ss_pred             ----eeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          243 ----RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       243 ----~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                          .+|+|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||+|||||.+|++.++++||+++.++++++|+++++
T Consensus       689 ~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~  768 (1028)
T 2zxe_A          689 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVE  768 (1028)
T ss_dssp             HCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred             hCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence                3899999999999999999999999999999999999999999999996699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          319 WGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       319 ~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      +||++|+|+++++.|.+++|+..+...+++.++.++
T Consensus       769 ~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~  804 (1028)
T 2zxe_A          769 EGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVP  804 (1028)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            999999999999999999999988777777666544

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=100.00  E-value=7.6e-52  Score=442.94  Aligned_cols=334  Identities=25%  Similarity=0.365  Sum_probs=266.4

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCce-----------e--------------CCCccCCCEEE
Q 044334           17 EGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANES-SDIR-----------V--------------TGDQIPADGLF   70 (358)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~-----------V--------------~G~~IPaDg~v   70 (358)
                      ..|+|+++++++++++..++.++++|+++++++|+++. ++++           |              +||+|||||+|
T Consensus        87 ~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~l  166 (995)
T 3ar4_A           87 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRI  166 (995)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEE
T ss_pred             hhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEE
Confidence            48999999999999999999999999999999998765 2221           2              99999999999


Q ss_pred             Eee--CceEEecCCCcCCCcceeeecCC------------ceEEE------------Eeeecccccch------------
Q 044334           71 LNG--HSLKVDECSMTGETDRWLWLRAR------------HFCWN------------EHCLGTRDEMG------------  112 (358)
Q Consensus        71 l~g--~~~~vDes~lTGEs~Pv~k~~~~------------~~~~~------------V~~~G~~T~~g------------  112 (358)
                      ++|  .++.||||+|||||.||.|.+++            +.+++            |++||.+|.+|            
T Consensus       167 l~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~  246 (995)
T 3ar4_A          167 LSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQD  246 (995)
T ss_dssp             EEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCCC
T ss_pred             EEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCCCC
Confidence            764  35799999999999999998762            33333            99999999998            


Q ss_pred             -----------------------hHHhhhcc------cccchH----HHHHHHHHHHHHhhcCCchhHHH----------
Q 044334          113 -----------------------NREFLGTN------TKVDDV----IYIIAAAVTIIVVAIPEGLPLAL----------  149 (358)
Q Consensus       113 -----------------------~~~~~~~~------~~~~~~----~~~~~~~~~~lv~a~P~~L~la~----------  149 (358)
                                             +..|..+.      ..+.+|    ...+..++++++++|||+||+++          
T Consensus       247 ~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~  326 (995)
T 3ar4_A          247 KTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRR  326 (995)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence                                   01111111      011123    34567899999999999999988          


Q ss_pred             ------------------HHHHHhhCceeeEeecCCC-----------C-------------------------------
Q 044334          150 ------------------LQEAVGLNTICNVYKSNSE-----------S-------------------------------  169 (358)
Q Consensus       150 ------------------~~~~~~l~~t~t~~~~~~~-----------~-------------------------------  169 (358)
                                        -++.+|+|||||+|+++..           +                               
T Consensus       327 ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  406 (995)
T 3ar4_A          327 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSG  406 (995)
T ss_dssp             HHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGG
T ss_pred             hccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccccccc
Confidence                              2456899999999976310           0                               


Q ss_pred             ---------------------------ceeEcCCccHHHHHHHHHHhcCC-C----------------------------
Q 044334          170 ---------------------------TTEITGSPTEKAILSWAVFDLGM-N----------------------------  193 (358)
Q Consensus       170 ---------------------------~~~~~g~~~e~all~~a~~~~~~-~----------------------------  193 (358)
                                                 .+...|||+|.|++.+++ +.+. +                            
T Consensus       407 ~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~-~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  485 (995)
T 3ar4_A          407 QFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFT  485 (995)
T ss_dssp             GCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEE
T ss_pred             ccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHH-HcCCccccccccccccccccchhhhhhhCceEEE
Confidence                                       011248999999999887 5432 0                            


Q ss_pred             ------------------C-----Cc---------------------------------------hHH--HhccCceEEE
Q 044334          194 ------------------R-----NN---------------------------------------TDV--AAKSLRCMAF  209 (358)
Q Consensus       194 ------------------~-----~~---------------------------------------~~~--a~~G~rvl~~  209 (358)
                                        .     ..                                       +++  +++|+||+++
T Consensus       486 ~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~  565 (995)
T 3ar4_A          486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL  565 (995)
T ss_dssp             EEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred             eecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEE
Confidence                              0     00                                       234  7899999999


Q ss_pred             Eeeccc-------------------c---------------------------C-Cceeeecccccccchhhhhhcccc-
Q 044334          210 ARTKVA-------------------E---------------------------A-DDEVIEGVQFRNLSAEEGVAKIEN-  241 (358)
Q Consensus       210 a~~~~~-------------------~---------------------------~-~~~~ltGd~~~~~~~~~~~~~~~~-  241 (358)
                      ||++.+                   +                           + +..|+|||+..  ++..+++.++. 
T Consensus       566 A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~--ta~~ia~~lgi~  643 (995)
T 3ar4_A          566 ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKG--TAIAICRRIGIF  643 (995)
T ss_dssp             EEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHHTSS
T ss_pred             EEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHH--HHHHHHHHcCcC
Confidence            998641                   1                           3 67899999865  44445554443 


Q ss_pred             ------------------------------ceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC
Q 044334          242 ------------------------------IRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI  291 (358)
Q Consensus       242 ------------------------------~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~  291 (358)
                                                    ..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+||+|| 
T Consensus       644 ~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-  722 (995)
T 3ar4_A          644 GENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-  722 (995)
T ss_dssp             CTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-
T ss_pred             CCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-
Confidence                                          2499999999999999999999999999999999999999999999999 


Q ss_pred             CchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044334          292 EGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLTVNFAALIVNIFAAVQKFR  354 (358)
Q Consensus       292 ~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~~~~~~~~~g~~~~~~  354 (358)
                      +|+++++++||+++.++++.++++++++||++|+|+++|+.|.+++|+..+...+++.+++++
T Consensus       723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~  785 (995)
T 3ar4_A          723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLP  785 (995)
T ss_dssp             TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999999999999999999887777777776654

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.53  E-value=1.2e-18  Score=159.51  Aligned_cols=110  Identities=25%  Similarity=0.323  Sum_probs=101.1

Q ss_pred             CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHH
Q 044334          218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWA  297 (358)
Q Consensus       218 ~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a  297 (358)
                      ...++||++..  ..+.+.+.++...+|+.+.|++|..+++.++..++.|+|||||.||+++++.|++|+++| ++++.+
T Consensus       154 ~~~i~T~~~~~--~~~~~~~~~gl~~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~  230 (263)
T 2yj3_A          154 KIIILSGDKED--KVKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDIS  230 (263)
Confidence            56889999866  455677777888899999999999999999998889999999999999999999999999 788999


Q ss_pred             HhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHH
Q 044334          298 KEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKC  330 (358)
Q Consensus       298 ~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~  330 (358)
                      ++.+|++++++++..++++++++|+++++|+||
T Consensus       231 ~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n  263 (263)
T 2yj3_A          231 KNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN  263 (263)
Confidence            999999999999999999999999999999997

>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}

Probab=99.63  E-value=4.1e-17  Score=131.75  Aligned_cols=52  Identities=23%  Similarity=0.323  Sum_probs=48.0

Q ss_pred             CCCccCCCEEEEeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch
Q 044334           60 TGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG  112 (358)
Q Consensus        60 ~G~~IPaDg~vl~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g  112 (358)
                      |||+|||||+|++| ...||||+|||||.|+.|.+|+.+++|           |+++|.+|.+|
T Consensus        52 ~G~~iPaDg~vi~g-~~~vdeS~LTGEs~pv~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~  114 (124)
T 2kij_A           52 PGGKFPVDGRVIEG-HSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLS  114 (124)
T ss_dssp             TTCBCSSCEEECSC-CCEEECTTTTCCSSCEECCTTEEECTTCEEESSCCEEEECSCTTTCHHH
T ss_pred             CCCEEEeeEEEEEc-cEEEEeccccCCCccEEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHH
Confidence            99999999999999 569999999999999999998876665           89999999988

>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F

Probab=99.62  E-value=6.4e-17  Score=128.40  Aligned_cols=52  Identities=25%  Similarity=0.397  Sum_probs=48.7

Q ss_pred             CCCccCCCEEEEeeCceEEecCCCcCCCcceeeecCCceEEE-----------Eeeecccccch
Q 044334           60 TGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRARHFCWN-----------EHCLGTRDEMG  112 (358)
Q Consensus        60 ~G~~IPaDg~vl~g~~~~vDes~lTGEs~Pv~k~~~~~~~~~-----------V~~~G~~T~~g  112 (358)
                      |||+|||||+|++| .+.||||+|||||.|+.|.+|+.+++|           |+++|.+|.+|
T Consensus        40 ~G~~iPaDg~v~~g-~~~vdeS~LTGEs~pv~k~~g~~v~aGt~~~~G~~~~~V~~~g~~T~~~  102 (113)
T 2hc8_A           40 PGEKIPVDGVVVEG-ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLA  102 (113)
T ss_dssp             TTCBCCSEEEEEEC-CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHH
T ss_pred             CCCEEeeeEEEEEc-eEEEEccccCCCCccEEECCCCEEEeCCEEeeceEEEEEEEecCcCHHH
Confidence            99999999999999 689999999999999999999876665           99999999988

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.51  E-value=6.6e-15  Score=134.20  Aligned_cols=115  Identities=24%  Similarity=0.239  Sum_probs=92.9

Q ss_pred             CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHH
Q 044334          218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWA  297 (358)
Q Consensus       218 ~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a  297 (358)
                      ...++||+...  ..+.+.+.++...+|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++|++|+ ++.+..
T Consensus       162 ~~~i~T~~~~~--~~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~  237 (280)
T 3skx_A          162 KCMMLTGDNRF--VAKWVAEELGLDDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVA  237 (280)
T ss_dssp             EEEEECSSCHH--HHHHHHHHHTCSEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSC
T ss_pred             EEEEEeCCCHH--HHHHHHHHcCChhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEec-CCcHHH
Confidence            55788988755  3445666777888999999999999999998776 6799999999999999999999999 888889


Q ss_pred             HhcCCEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          298 KEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQKCLQFQLT  336 (358)
Q Consensus       298 ~~~adiil~~~~~~~i~~~i~~~r~~~~~i~~~i~~~~~  336 (358)
                      ++.||+++..+++..+.++++++|++++++++|+.|++.
T Consensus       238 ~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~  276 (280)
T 3skx_A          238 VETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP  276 (280)
T ss_dssp             CCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred             HhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999875

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.41  E-value=8.9e-14  Score=129.04  Aligned_cols=76  Identities=16%  Similarity=0.054  Sum_probs=68.2

Q ss_pred             eeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcc---cccCCcceecCC------CchHHHHhcCCEEEeCCCcchH
Q 044334          243 RVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPA---PKVADIGPWMGI------EGTKWAKEGSDIIIMDDNFTSV  313 (358)
Q Consensus       243 ~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~a---l~~Advgia~~~------~~~~~a~~~adiil~~~~~~~i  313 (358)
                      ..+++..|.+|...+..+++.++.|+|+|||+||+||   |+.||+||+||-      ++++.+++++||||++|++..+
T Consensus       209 ~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v  288 (297)
T 4fe3_A          209 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEV  288 (297)
T ss_dssp             CTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHH
T ss_pred             chhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHH
Confidence            4567778999999999999999999999999999999   559999999983      6788999999999999999999


Q ss_pred             HHHHH
Q 044334          314 VTDQR  318 (358)
Q Consensus       314 ~~~i~  318 (358)
                      +..|.
T Consensus       289 ~~~il  293 (297)
T 4fe3_A          289 VNSIL  293 (297)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.31  E-value=1.3e-12  Score=120.50  Aligned_cols=107  Identities=35%  Similarity=0.423  Sum_probs=87.0

Q ss_pred             CceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHH
Q 044334          218 DDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWA  297 (358)
Q Consensus       218 ~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a  297 (358)
                      ...++||+...  ..+.+.+.++...+|....|+.|...++.++.. ..++|+||+.||.++.+.|+++++++ ++.+..
T Consensus       181 ~~~i~T~~~~~--~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~  256 (287)
T 3a1c_A          181 KVGMITGDNWR--SAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA  256 (287)
T ss_dssp             EEEEECSSCHH--HHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCS
T ss_pred             eEEEEeCCCHH--HHHHHHHHhCCceeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHH
Confidence            56788888755  334556667777899999999999999999988 89999999999999999999999998 676666


Q ss_pred             HhcCCEEEeCCCcchHHHHHHHHHHHHHHHH
Q 044334          298 KEGSDIIIMDDNFTSVVTDQRWGRCVNNNIQ  328 (358)
Q Consensus       298 ~~~adiil~~~~~~~i~~~i~~~r~~~~~i~  328 (358)
                      +..+|+++.++++..+.++++.+|+++++|+
T Consensus       257 ~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~  287 (287)
T 3a1c_A          257 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIK  287 (287)
T ss_dssp             SCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred             HhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence            7889999988899999999999999999875

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.27  E-value=5.4e-13  Score=115.61  Aligned_cols=125  Identities=14%  Similarity=0.085  Sum_probs=98.9

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCC----CcEEEEecC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK----GYVVAVTGD  272 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~----g~~v~~vGD  272 (358)
                      +.+.++|+++             .++||+...  ..+.+.+.++...+|...  ..|.+.++.+.++    ...++|+||
T Consensus        56 ~~L~~~g~~~-------------~i~T~~~~~--~~~~~~~~lgl~~~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD  118 (189)
T 3mn1_A           56 KMLIASGVTT-------------AIISGRKTA--IVERRAKSLGIEHLFQGR--EDKLVVLDKLLAELQLGYEQVAYLGD  118 (189)
T ss_dssp             HHHHHTTCEE-------------EEECSSCCH--HHHHHHHHHTCSEEECSC--SCHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             HHHHHCCCEE-------------EEEECcChH--HHHHHHHHcCCHHHhcCc--CChHHHHHHHHHHcCCChhHEEEECC
Confidence            4566778877             578888755  445677777777777766  5666666665433    567999999


Q ss_pred             CCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCC----cchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044334          273 GTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDN----FTSVVTDQRWGRCVNNNIQKCLQFQLTVNF  339 (358)
Q Consensus       273 G~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~----~~~i~~~i~~~r~~~~~i~~~i~~~~~~n~  339 (358)
                      +.||.++++.|+++++++ ++.+..++.||+++.+++    +..+.+.+..+|..++++++|+.|.+.||-
T Consensus       119 ~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  188 (189)
T 3mn1_A          119 DLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHHH  188 (189)
T ss_dssp             SGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC----
T ss_pred             CHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhccccccC
Confidence            999999999999999999 888999999999998764    667888888899999999999999999983

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.94  E-value=2e-10  Score=108.14  Aligned_cols=89  Identities=12%  Similarity=0.001  Sum_probs=71.5

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNNI  327 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~i  327 (358)
                      ..|+-...+.+.++-....++|+||+.||.+|++.|++|++|  ++.+..++.||.++..+++..+..+++......+++
T Consensus       245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~  322 (335)
T 3n28_A          245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL  322 (335)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred             hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence            355556666667766667899999999999999999999999  678899999999999999999999999888888899


Q ss_pred             HHHHHHHHHHH
Q 044334          328 QKCLQFQLTVN  338 (358)
Q Consensus       328 ~~~i~~~~~~n  338 (358)
                      ++|+.|++.||
T Consensus       323 ~~~~~~~~~~~  333 (335)
T 3n28_A          323 SWKSKEGHHHH  333 (335)
T ss_dssp             CCC--------
T ss_pred             ccccccccccc
Confidence            99999999998

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.76  E-value=9.7e-09  Score=88.79  Aligned_cols=121  Identities=10%  Similarity=-0.035  Sum_probs=93.7

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecC--ChhhHHHHHHhhcCCCcEEEEecCCC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARS--SVPDKLLTVQSLKPKGYVVAVTGDGT  274 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~--~P~~K~~iv~~l~~~g~~v~~vGDG~  274 (358)
                      +.+.++|+++             .++||+...  ..+...+.++...++...  .|+-...+++.++-....++|+||+.
T Consensus        56 ~~L~~~g~~~-------------~ivTn~~~~--~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~  120 (191)
T 3n1u_A           56 KLLMAAGIQV-------------AIITTAQNA--VVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDL  120 (191)
T ss_dssp             HHHHHTTCEE-------------EEECSCCSH--HHHHHHHHHTCCEEECSCSSCHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred             HHHHHCCCeE-------------EEEeCcChH--HHHHHHHHcCCccceeCCCChHHHHHHHHHHhCCCHHHEEEECCCH
Confidence            4666778877             578887654  344566667777777766  56777788888877777899999999


Q ss_pred             CCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcc----hHHHHHHHHHHHHHHHHHHHHH
Q 044334          275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFT----SVVTDQRWGRCVNNNIQKCLQF  333 (358)
Q Consensus       275 ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~----~i~~~i~~~r~~~~~i~~~i~~  333 (358)
                      ||.++++.|+++++++ ++.+..++.||+++.+++-.    .+.+.+...|..+.++.+++.+
T Consensus       121 ~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~  182 (191)
T 3n1u_A          121 PDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK  182 (191)
T ss_dssp             GGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred             HHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence            9999999999999999 88899999999999987744    4555666677777777666543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.75  E-value=9.5e-09  Score=87.80  Aligned_cols=123  Identities=11%  Similarity=0.041  Sum_probs=89.3

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHh----hcCCCcEEEEecC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQS----LKPKGYVVAVTGD  272 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~----l~~~g~~v~~vGD  272 (358)
                      +.+.++|+++             .++||+...  ..+.+.+.++...++....|  |...++.    +.-....++|+||
T Consensus        45 ~~L~~~G~~~-------------~i~Tg~~~~--~~~~~~~~lgl~~~~~~~k~--k~~~~~~~~~~~~~~~~~~~~vGD  107 (180)
T 1k1e_A           45 KMLMDADIQV-------------AVLSGRDSP--ILRRRIADLGIKLFFLGKLE--KETACFDLMKQAGVTAEQTAYIGD  107 (180)
T ss_dssp             HHHHHTTCEE-------------EEEESCCCH--HHHHHHHHHTCCEEEESCSC--HHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             HHHHHCCCeE-------------EEEeCCCcH--HHHHHHHHcCCceeecCCCC--cHHHHHHHHHHcCCCHHHEEEECC
Confidence            3556678877             578888755  34455666666667765544  4444443    3333367999999


Q ss_pred             CCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHH-H---HHHHHHHHHHHHHHHHHHHHHH
Q 044334          273 GTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVV-T---DQRWGRCVNNNIQKCLQFQLTV  337 (358)
Q Consensus       273 G~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~-~---~i~~~r~~~~~i~~~i~~~~~~  337 (358)
                      +.||.++++.|+++++++ ++.+..++.||+++.+++..++. +   .+...|..+++++.++.|....
T Consensus       108 ~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  175 (180)
T 1k1e_A          108 DSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLKSV  175 (180)
T ss_dssp             SGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHHHG
T ss_pred             CHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhhhh
Confidence            999999999999999998 88889999999999887666655 3   3344666788888888887654

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.66  E-value=6.1e-09  Score=88.79  Aligned_cols=100  Identities=11%  Similarity=0.045  Sum_probs=75.4

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCC----CcEEEEecC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK----GYVVAVTGD  272 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~----g~~v~~vGD  272 (358)
                      +.+.++|+++             .++||+...  ..+.+.+.++.. ++...  ..|.+.++.+.++    ...++|+||
T Consensus        49 ~~L~~~g~~~-------------~i~T~~~~~--~~~~~~~~lgi~-~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD  110 (176)
T 3mmz_A           49 AALRKSGLTM-------------LILSTEQNP--VVAARARKLKIP-VLHGI--DRKDLALKQWCEEQGIAPERVLYVGN  110 (176)
T ss_dssp             HHHHHTTCEE-------------EEEESSCCH--HHHHHHHHHTCC-EEESC--SCHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             HHHHHCCCeE-------------EEEECcChH--HHHHHHHHcCCe-eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcC
Confidence            4566778877             578888755  344566666666 66665  4466666555432    467999999


Q ss_pred             CCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHH
Q 044334          273 GTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       273 G~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      +.||.++++.|+++++++ ++.+..++.||+++.+++..++..
T Consensus       111 ~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~  152 (176)
T 3mmz_A          111 DVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIR  152 (176)
T ss_dssp             SGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHH
T ss_pred             CHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHH
Confidence            999999999999999999 788999999999998877555443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.60  E-value=6.5e-08  Score=83.93  Aligned_cols=100  Identities=10%  Similarity=0.058  Sum_probs=76.2

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhH--HHHHHhhcCCCcEEEEecCCC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDK--LLTVQSLKPKGYVVAVTGDGT  274 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K--~~iv~~l~~~g~~v~~vGDG~  274 (358)
                      +.+.++|+++             .++||+...  ..+.+.+.++...+|....|.-.  ..+.+.+.-....++|+||+.
T Consensus        62 ~~L~~~G~~~-------------~ivT~~~~~--~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~  126 (195)
T 3n07_A           62 KALMNAGIEI-------------AIITGRRSQ--IVENRMKALGISLIYQGQDDKVQAYYDICQKLAIAPEQTGYIGDDL  126 (195)
T ss_dssp             HHHHHTTCEE-------------EEECSSCCH--HHHHHHHHTTCCEEECSCSSHHHHHHHHHHHHCCCGGGEEEEESSG
T ss_pred             HHHHHCCCEE-------------EEEECcCHH--HHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHhCCCHHHEEEEcCCH
Confidence            4566778877             578888755  44567777787777877654322  334444444456899999999


Q ss_pred             CCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcch
Q 044334          275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS  312 (358)
Q Consensus       275 ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~  312 (358)
                      ||.++++.|+++++|+ ++.+..++.||+++..++-.+
T Consensus       127 nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G  163 (195)
T 3n07_A          127 IDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHG  163 (195)
T ss_dssp             GGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTT
T ss_pred             HHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCC
Confidence            9999999999999999 899999999999998876555

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.59  E-value=2.1e-08  Score=88.14  Aligned_cols=103  Identities=14%  Similarity=0.095  Sum_probs=79.0

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCC----CcEEEEecC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPK----GYVVAVTGD  272 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~----g~~v~~vGD  272 (358)
                      +.+.++|+++             .++||+...  ..+.+.+.++...+|...  ..|.+.++.+.++    ...++|+||
T Consensus        86 ~~L~~~G~~l-------------~I~T~~~~~--~~~~~l~~lgi~~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGD  148 (211)
T 3ij5_A           86 RCLITSDIDV-------------AIITGRRAK--LLEDRANTLGITHLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGD  148 (211)
T ss_dssp             HHHHHTTCEE-------------EEECSSCCH--HHHHHHHHHTCCEEECSC--SSHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred             HHHHHCCCEE-------------EEEeCCCHH--HHHHHHHHcCCchhhccc--CChHHHHHHHHHHcCcCcceEEEEcC
Confidence            4566778877             578888755  445677777877788877  4566666665443    578999999


Q ss_pred             CCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcch-HHHHH
Q 044334          273 GTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS-VVTDQ  317 (358)
Q Consensus       273 G~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~-i~~~i  317 (358)
                      +.||.++++.|+++++++ ++.+.+++.||+++.+++-.+ +.+++
T Consensus       149 s~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~  193 (211)
T 3ij5_A          149 DLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVC  193 (211)
T ss_dssp             SGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred             CHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHH
Confidence            999999999999999999 788899999999998864443 44444

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.58  E-value=5e-08  Score=82.66  Aligned_cols=95  Identities=16%  Similarity=0.156  Sum_probs=72.3

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhh--ccccceeeecCChhhHHHHHHhhcCC----CcEEEEe
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVA--KIENIRVTARSSVPDKLLTVQSLKPK----GYVVAVT  270 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~--~~~~~~v~a~~~P~~K~~iv~~l~~~----g~~v~~v  270 (358)
                      +.+.++|+++             .++||+  .  ..+.+.+  .++.. ++..  +++|...++.+.++    ...++|+
T Consensus        46 ~~Lk~~Gi~~-------------~I~Tg~--~--~~~~~l~~l~lgi~-~~~g--~~~K~~~l~~~~~~~gi~~~~~~~v  105 (168)
T 3ewi_A           46 SLLKKSGIEV-------------RLISER--A--CSKQTLSALKLDCK-TEVS--VSDKLATVDEWRKEMGLCWKEVAYL  105 (168)
T ss_dssp             HHHHHTTCEE-------------EEECSS--C--CCHHHHHTTCCCCC-EECS--CSCHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             HHHHHCCCEE-------------EEEeCc--H--HHHHHHHHhCCCcE-EEEC--CCChHHHHHHHHHHcCcChHHEEEE
Confidence            4666778877             588998  3  2333444  45554 5543  46788877766543    4579999


Q ss_pred             cCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcch
Q 044334          271 GDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS  312 (358)
Q Consensus       271 GDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~  312 (358)
                      ||+.||.++++.|+++++|+ ++.+..++.||+++..++-.+
T Consensus       106 GD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G  146 (168)
T 3ewi_A          106 GNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRG  146 (168)
T ss_dssp             CCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTT
T ss_pred             eCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCcc
Confidence            99999999999999999999 899999999999998776655

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.41  E-value=3.2e-07  Score=76.63  Aligned_cols=106  Identities=14%  Similarity=0.003  Sum_probs=79.2

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCCh--hhHHHHHHhhcCCCcEEEEecCCC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSV--PDKLLTVQSLKPKGYVVAVTGDGT  274 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P--~~K~~iv~~l~~~g~~v~~vGDG~  274 (358)
                      +.+.++|+++             .++||....  ..+.+.+.++...++....|  +--..+.+.+.-....++|+||+.
T Consensus        41 ~~l~~~g~~~-------------~i~T~~~~~--~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~  105 (164)
T 3e8m_A           41 FWAHNKGIPV-------------GILTGEKTE--IVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLEQVAYIGDDL  105 (164)
T ss_dssp             HHHHHTTCCE-------------EEECSSCCH--HHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred             HHHHHCCCEE-------------EEEeCCChH--HHHHHHHHcCCCEeecccCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence            4556677776             578887754  34456666777777776654  333445555554556899999999


Q ss_pred             CCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcch-HHHHHH
Q 044334          275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTS-VVTDQR  318 (358)
Q Consensus       275 ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~-i~~~i~  318 (358)
                      ||.++++.|+++++++ ++.+..++.||+++.+++..+ +.++++
T Consensus       106 ~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~  149 (164)
T 3e8m_A          106 NDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVE  149 (164)
T ss_dssp             GGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred             HHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence            9999999999999998 889999999999999988666 555554

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.18  E-value=7.5e-07  Score=80.32  Aligned_cols=67  Identities=22%  Similarity=0.276  Sum_probs=56.9

Q ss_pred             hhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      -.|...++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..|+.||+++.+++-.++.++++
T Consensus       193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~  263 (268)
T 3r4c_A          193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALK  263 (268)
T ss_dssp             CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence            346666655543    3356999999999999999999999999 999999999999999988889988875

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.13  E-value=1.2e-06  Score=78.71  Aligned_cols=66  Identities=18%  Similarity=0.153  Sum_probs=55.4

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|..-++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..|+.||+++.+++-.++.++++
T Consensus       183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~  252 (258)
T 2pq0_A          183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK  252 (258)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence            36555555432    3457999999999999999999999999 899999999999998888888888775

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.12  E-value=1.1e-06  Score=79.60  Aligned_cols=67  Identities=28%  Similarity=0.334  Sum_probs=56.8

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      .|...++.+.+    ....++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++.
T Consensus       197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~  267 (279)
T 4dw8_A          197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER  267 (279)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence            56666655533    3456999999999999999999999999 9999999999999998888889888763

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.11  E-value=1.6e-06  Score=78.22  Aligned_cols=66  Identities=18%  Similarity=0.110  Sum_probs=55.5

Q ss_pred             hHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+    .-....++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus       200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~  269 (274)
T 3fzq_A          200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELK  269 (274)
T ss_dssp             SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHH
Confidence            355554444    434457999999999999999999999999 999999999999999888888888775

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.10  E-value=1.4e-06  Score=79.51  Aligned_cols=67  Identities=18%  Similarity=0.157  Sum_probs=57.0

Q ss_pred             hhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|...++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus       201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~  271 (290)
T 3dnp_A          201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMK  271 (290)
T ss_dssp             CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHH
Confidence            447666665543    2356999999999999999999999999 999999999999998888888988886

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.09  E-value=1.4e-06  Score=79.59  Aligned_cols=66  Identities=15%  Similarity=0.035  Sum_probs=56.9

Q ss_pred             hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.+.    -..|+++||+.||.+|++.|++|++|+ ++.+..|+.||++..+++-.++.++++
T Consensus       211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~  280 (283)
T 3dao_A          211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK  280 (283)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence            477777666432    356999999999999999999999999 999999999999999888888888775

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.03  E-value=1.1e-06  Score=82.38  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=59.6

Q ss_pred             hhhHHHHHHhhcCCC--cEEEEecCCCCCCcccccC----CcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH----H
Q 044334          250 VPDKLLTVQSLKPKG--YVVAVTGDGTNDAPAPKVA----DIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR----W  319 (358)
Q Consensus       250 P~~K~~iv~~l~~~g--~~v~~vGDG~ND~~al~~A----dvgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~----~  319 (358)
                      +.+|...++.++...  +.|+++||+.||.+|++.|    ++|++|  ++.+.+++.||+++.+++..++.++++    .
T Consensus       205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~  282 (332)
T 1y8a_A          205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELFMER  282 (332)
T ss_dssp             HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHc
Confidence            567888888665432  4599999999999999999    999999  678999999999999989977776654    4


Q ss_pred             HHHHH
Q 044334          320 GRCVN  324 (358)
Q Consensus       320 ~r~~~  324 (358)
                      +|..+
T Consensus       283 ~~~~~  287 (332)
T 1y8a_A          283 KERAF  287 (332)
T ss_dssp             GGGGG
T ss_pred             CCchh
Confidence            55544

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.03  E-value=2.9e-06  Score=75.06  Aligned_cols=67  Identities=22%  Similarity=0.128  Sum_probs=57.3

Q ss_pred             hhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .+|...++.+.+.    ...++++||+.||.++++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus       152 ~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~  222 (227)
T 1l6r_A          152 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK  222 (227)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence            5687777776542    357999999999999999999999999 888999999999998888888888775

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.01  E-value=2e-06  Score=79.30  Aligned_cols=67  Identities=21%  Similarity=0.154  Sum_probs=57.3

Q ss_pred             hhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|...++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..|+.||+++.+++-.++.++++
T Consensus       227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~  297 (304)
T 3l7y_A          227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID  297 (304)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence            457777766643    2356999999999999999999999999 999999999999998888888888776

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.00  E-value=5.9e-06  Score=70.77  Aligned_cols=106  Identities=13%  Similarity=0.044  Sum_probs=73.2

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChh--hHHHHHHhhcCCCcEEEEecCCC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVP--DKLLTVQSLKPKGYVVAVTGDGT  274 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~--~K~~iv~~l~~~g~~v~~vGDG~  274 (358)
                      +.+.++|+++             .++||....  ..+.+.+.++...++....|.  --..+.+.+.-....++|+||+.
T Consensus        63 ~~L~~~g~~v-------------~ivT~~~~~--~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~  127 (188)
T 2r8e_A           63 RCALTSDIEV-------------AIITGRKAK--LVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDL  127 (188)
T ss_dssp             HHHHTTTCEE-------------EEECSSCCH--HHHHHHHHHTCCEEECSCSCSHHHHHHHHHHHTCCGGGEEEEESSG
T ss_pred             HHHHHCCCeE-------------EEEeCCChH--HHHHHHHHcCCceeecCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence            3555678777             578887654  334555566666666655442  22223333333336799999999


Q ss_pred             CCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHH-HHHH
Q 044334          275 NDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVV-TDQR  318 (358)
Q Consensus       275 ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~-~~i~  318 (358)
                      ||.++++.|+++++++ ++.+..++.||+++.+.+-.++. ++++
T Consensus       128 ~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~  171 (188)
T 2r8e_A          128 IDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD  171 (188)
T ss_dssp             GGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred             HHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence            9999999999999998 67777788999999887555555 5554

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.99  E-value=1e-06  Score=79.97  Aligned_cols=66  Identities=26%  Similarity=0.238  Sum_probs=46.0

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..|+.||+++.+++-.++.++++
T Consensus       197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~  266 (279)
T 3mpo_A          197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR  266 (279)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence            37666665543    2356999999999999999999999999 999999999999998888888888775

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=97.97  E-value=3.5e-06  Score=81.42  Aligned_cols=113  Identities=17%  Similarity=0.114  Sum_probs=82.3

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecC-----------------ChhhHHHHHHh
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARS-----------------SVPDKLLTVQS  259 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~-----------------~P~~K~~iv~~  259 (358)
                      ..+.++|+++             .++||....  ..+.+.+.++...+++..                 .+..|.++++.
T Consensus       266 ~~Lk~~G~~~-------------~ivS~~~~~--~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~  330 (415)
T 3p96_A          266 RTLRRLGYAC-------------GVVSGGFRR--IIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALRE  330 (415)
T ss_dssp             HHHHHTTCEE-------------EEEEEEEHH--HHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred             HHHHHCCCEE-------------EEEcCCcHH--HHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHH
Confidence            6677778877             456665433  223444444544444421                 25667776665


Q ss_pred             hcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHHHHH
Q 044334          260 LKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCVNNN  326 (358)
Q Consensus       260 l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~~~~  326 (358)
                      +.+    ....+.|+||+.||.++++.|++|+++  ++.+..++.||+++..+++..+..++.++|.-+..
T Consensus       331 ~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~  399 (415)
T 3p96_A          331 FAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA  399 (415)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred             HHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence            543    235799999999999999999999999  56788889999999999999999999888776554

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.94  E-value=3.4e-06  Score=77.01  Aligned_cols=67  Identities=21%  Similarity=0.126  Sum_probs=55.2

Q ss_pred             hhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCE--EEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDI--IIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adi--il~~~~~~~i~~~i~  318 (358)
                      ..|..-++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..|+.||.  ++.+++-.++.++++
T Consensus       208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~  280 (285)
T 3pgv_A          208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR  280 (285)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence            447777776643    2357999999999999999999999999 999999999984  666777778887775

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=97.78  E-value=3.7e-05  Score=63.65  Aligned_cols=105  Identities=10%  Similarity=-0.024  Sum_probs=73.2

Q ss_pred             HHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCCh--hhHHHHHHhhcCCCcEEEEecCCCC
Q 044334          198 DVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSV--PDKLLTVQSLKPKGYVVAVTGDGTN  275 (358)
Q Consensus       198 ~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P--~~K~~iv~~l~~~g~~v~~vGDG~N  275 (358)
                      .+.++|+++             .++||....  ..+.+.+.++...++....|  +--..+++.++-....++|+||+.|
T Consensus        47 ~l~~~g~~~-------------~i~T~~~~~--~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~  111 (162)
T 2p9j_A           47 LLQKMGITL-------------AVISGRDSA--PLITRLKELGVEEIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVV  111 (162)
T ss_dssp             HHHTTTCEE-------------EEEESCCCH--HHHHHHHHTTCCEEEECC--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred             HHHHCCCEE-------------EEEeCCCcH--HHHHHHHHcCCHhhccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            455678777             467777644  23345555565556655433  3334456666555567999999999


Q ss_pred             CCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHH-HHHH
Q 044334          276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVV-TDQR  318 (358)
Q Consensus       276 D~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~-~~i~  318 (358)
                      |.++.+.|++++++. ++.+..++.+|+++.+.+-.++. ++++
T Consensus       112 Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~  154 (162)
T 2p9j_A          112 DIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAE  154 (162)
T ss_dssp             GHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred             HHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence            999999999999998 77788888999999887766666 4443

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.76  E-value=2.8e-05  Score=65.86  Aligned_cols=63  Identities=24%  Similarity=0.344  Sum_probs=51.4

Q ss_pred             cCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          247 RSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ...|..|...++.+  ....++++||+.||.++++.|+++++|+ ++.+    .||+++.  ++..+.++++
T Consensus       135 ~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~  197 (201)
T 4ap9_A          135 RLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK  197 (201)
T ss_dssp             ECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred             cCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence            44568899999999  4457899999999999999999999998 6655    8899984  4666666554

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=97.73  E-value=1.5e-05  Score=68.78  Aligned_cols=69  Identities=19%  Similarity=0.068  Sum_probs=52.9

Q ss_pred             hhhHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHH
Q 044334          250 VPDKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWG  320 (358)
Q Consensus       250 P~~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~  320 (358)
                      +..|.+.++.+    .-....++++||+.||.++++.|+++++|  ++.+..++.||+++.+++|..+..++.+.
T Consensus       140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~  212 (217)
T 3m1y_A          140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGH  212 (217)
T ss_dssp             TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred             CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhccc
Confidence            34455555444    33345799999999999999999999999  56788889999999999999988777653

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.72  E-value=1.5e-05  Score=72.63  Aligned_cols=71  Identities=18%  Similarity=0.099  Sum_probs=58.5

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +..|.  .|...++.+.+.    ...++++||+.||.++++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus       191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~  267 (282)
T 1rkq_A          191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE  267 (282)
T ss_dssp             EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred             EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence            34443  688777776432    346999999999999999999999999 888888899999998888888888775

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.69  E-value=7.2e-06  Score=73.03  Aligned_cols=61  Identities=16%  Similarity=0.247  Sum_probs=50.9

Q ss_pred             hHHHHHHhhcCCCcEEEEecCCCCCCcccccC--CcceecCCCchHHHHhcCCEEEeC-CCcchHHHHHH
Q 044334          252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVA--DIGPWMGIEGTKWAKEGSDIIIMD-DNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~A--dvgia~~~~~~~~a~~~adiil~~-~~~~~i~~~i~  318 (358)
                      .|..-++.|.+.-. |+++||+.||.+||+.|  +.||+|+ ++    ++.|++++.+ ++-.++.++++
T Consensus       160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~  223 (239)
T 1u02_A          160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE  223 (239)
T ss_dssp             CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence            69999998876533 89999999999999999  9999999 66    6889999876 56666766665

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.68  E-value=2.1e-05  Score=72.56  Aligned_cols=66  Identities=20%  Similarity=0.122  Sum_probs=56.5

Q ss_pred             hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEe-CCCcchHHHHHH
Q 044334          252 DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIM-DDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~-~~~~~~i~~~i~  318 (358)
                      .|...++.+.+.    ...++++||+.||.+|++.|++|++|+ ++.+..++.||+++. +++-.++.++++
T Consensus       224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~  294 (301)
T 2b30_A          224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK  294 (301)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred             CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence            688888776432    346899999999999999999999999 888888999999998 888888888775

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.66  E-value=2.1e-05  Score=71.18  Aligned_cols=67  Identities=22%  Similarity=0.169  Sum_probs=55.8

Q ss_pred             hhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|...++.+.+.    ...++++||+.||.++++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus       190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~  260 (271)
T 1rlm_A          190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ  260 (271)
T ss_dssp             CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence            3677777666432    356999999999999999999999999 888888999999998877778887775

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.64  E-value=2e-05  Score=71.98  Aligned_cols=66  Identities=21%  Similarity=0.179  Sum_probs=54.7

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +|...++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+.+-.++.++++
T Consensus       216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~  285 (288)
T 1nrw_A          216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK  285 (288)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence            46666555543    2357999999999999999999999999 888888999999998888888888775

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.59  E-value=2.6e-05  Score=72.56  Aligned_cols=105  Identities=18%  Similarity=0.116  Sum_probs=72.9

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecC-----------------ChhhHHHHHHh
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARS-----------------SVPDKLLTVQS  259 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~-----------------~P~~K~~iv~~  259 (358)
                      +.+.++|+++             .++|+....  ..+.+.+.++...+++..                 .+..|.++++.
T Consensus       189 ~~Lk~~G~~v-------------~IvSn~~~~--~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~  253 (317)
T 4eze_A          189 PVIKAKGFKT-------------AIISGGLDI--FTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVD  253 (317)
T ss_dssp             HHHHHTTCEE-------------EEEEEEEHH--HHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHH
T ss_pred             HHHHhCCCEE-------------EEEeCccHH--HHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHH
Confidence            6677788887             456665533  223344444444444422                 33555555544


Q ss_pred             h----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          260 L----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       260 l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +    .-....+.|+||+.||.++++.|+++++++  +.+..++.+|.++..+++..+.++++
T Consensus       254 ~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~  314 (317)
T 4eze_A          254 LAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE  314 (317)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred             HHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence            4    334467999999999999999999999994  67777889999999899988877653

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.57  E-value=2.5e-05  Score=69.63  Aligned_cols=66  Identities=14%  Similarity=0.024  Sum_probs=52.3

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhc-------CCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEG-------SDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~-------adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.+    ....++++||+.||.++++.+++|++|+ ++.+..++.       +|++..+++-.++.++++
T Consensus       162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~  238 (244)
T 1s2o_A          162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA  238 (244)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence            35555555442    2356899999999999999999999999 888888885       789988877777877765

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.57  E-value=2.2e-05  Score=70.96  Aligned_cols=66  Identities=27%  Similarity=0.228  Sum_probs=55.4

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.+    ....++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus       190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~  259 (268)
T 1nf2_A          190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE  259 (268)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred             ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence            57777766643    2356899999999999999999999999 888888889999998888888887764

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.48  E-value=5e-05  Score=66.99  Aligned_cols=66  Identities=24%  Similarity=0.167  Sum_probs=52.8

Q ss_pred             hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.+    ....++++||+.||.++++.|+++++|+ ++.+..++.||+++.+.+-.++.++++
T Consensus       153 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~  222 (231)
T 1wr8_A          153 NKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY  222 (231)
T ss_dssp             CHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence            46666655532    3356899999999999999999999999 788888889999998766667777665

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=97.43  E-value=6.9e-05  Score=67.19  Aligned_cols=66  Identities=21%  Similarity=0.202  Sum_probs=52.3

Q ss_pred             hHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.+    .-....++++||+.||.+|++.|++|++|+ ++.+..+..||+++.+.+-.++.++++
T Consensus       187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~  256 (261)
T 2rbk_A          187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK  256 (261)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHH
Confidence            455555544    333457899999999999999999999999 888888999999997665556877664

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=97.31  E-value=8.8e-05  Score=67.51  Aligned_cols=65  Identities=17%  Similarity=0.116  Sum_probs=52.6

Q ss_pred             HHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          253 KLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       253 K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      |...++.+    .-....++++||+.||.++++.|+++++|+ ++.+..++.||+++.+++-.++.++++
T Consensus       212 k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~  280 (289)
T 3gyg_A          212 KNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLK  280 (289)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence            44444443    333456999999999999999999999999 888889999999998877777777765

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.26  E-value=0.00016  Score=62.95  Aligned_cols=70  Identities=27%  Similarity=0.337  Sum_probs=54.6

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCchHHHHh-cCCEEEeCCCcchHHHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEGTKWAKE-GSDIIIMDDNFTSVVTDQRWG  320 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~~~a~~-~adiil~~~~~~~i~~~i~~~  320 (358)
                      .|+--..+.+.+.-....++|+||+.||..+++.|++   ++++|.+..+..++ .+|+++  +++..+.++++.+
T Consensus       162 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~  235 (237)
T 4ex6_A          162 HPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG  235 (237)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence            4455667777777666789999999999999999999   99998434344444 799998  5588888887654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.14  E-value=8.8e-05  Score=66.46  Aligned_cols=64  Identities=19%  Similarity=0.196  Sum_probs=51.2

Q ss_pred             hhHHHHHHhhcCC-C-----cEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKPK-G-----YVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~~-g-----~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|...++.+.+. |     ..++++||+.||.+|++.|++|++|+ ++.+ .  .++++...++-.++.++++
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~  244 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE  244 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence            4566666665433 2     57999999999999999999999999 7777 3  7888888887777777765

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=97.13  E-value=0.00011  Score=62.81  Aligned_cols=70  Identities=10%  Similarity=-0.088  Sum_probs=55.6

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc-ceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI-GPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGR  321 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv-gia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r  321 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|++ +|+|+ ++.+..++.+|+++  +++..+...++..+
T Consensus       129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~--~~~~el~~~~~~~~  199 (205)
T 3m9l_A          129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHA--RDCAQLRDLLSAEG  199 (205)
T ss_dssp             SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence            3444566777776666789999999999999999999 99998 77777778899998  46888887776543

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.12  E-value=0.00011  Score=62.61  Aligned_cols=64  Identities=20%  Similarity=0.172  Sum_probs=48.6

Q ss_pred             hhhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHH
Q 044334          250 VPDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       250 P~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      +..|.+.++.+.+    ....++++||+.||.++++.|+++++|+  +.+..+..||+++.++++..+..
T Consensus       141 ~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~  208 (211)
T 1l7m_A          141 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK  208 (211)
T ss_dssp             TTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred             CccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence            3466665554432    2346999999999999999999999997  45666788999998767776654

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.09  E-value=8e-05  Score=67.60  Aligned_cols=66  Identities=17%  Similarity=0.072  Sum_probs=32.6

Q ss_pred             hHHHHHHhhcCC-----CcE--EEEecCCCCCCcccccCCcceecCCCch---HHHHhc--CC-EEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKPK-----GYV--VAVTGDGTNDAPAPKVADIGPWMGIEGT---KWAKEG--SD-IIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~-----g~~--v~~vGDG~ND~~al~~Advgia~~~~~~---~~a~~~--ad-iil~~~~~~~i~~~i~  318 (358)
                      .|...++.+.+.     ...  ++++||+.||.++++.|++|++|+ ++.   +..++.  || +++.+++-.++.++++
T Consensus       189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~  267 (275)
T 1xvi_A          189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGLD  267 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC------------------------------
T ss_pred             CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence            465555554322     234  999999999999999999999999 776   455543  78 8887777778877765

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.04  E-value=6.7e-05  Score=67.03  Aligned_cols=54  Identities=30%  Similarity=0.166  Sum_probs=41.7

Q ss_pred             hHHHHHHhhcC-----CCcEEEEecCCCCCCcccccCCcceecCCCch-HHHHhcCCEEEe
Q 044334          252 DKLLTVQSLKP-----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGT-KWAKEGSDIIIM  306 (358)
Q Consensus       252 ~K~~iv~~l~~-----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~-~~a~~~adiil~  306 (358)
                      .|...++.+.+     ....|+++||+.||.+||+.|++|++|| ++. +..++.||+++.
T Consensus       179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~  238 (249)
T 2zos_A          179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV  238 (249)
T ss_dssp             CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred             ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence            46666665542     2357999999999999999999999999 776 656667776654

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=96.99  E-value=0.00031  Score=60.63  Aligned_cols=70  Identities=14%  Similarity=0.100  Sum_probs=51.8

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCchHH-HHhcCCEEEeCCCcchHHHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEGTKW-AKEGSDIIIMDDNFTSVVTDQRWG  320 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~~~-a~~~adiil~~~~~~~i~~~i~~~  320 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|++   ++++|....+. .+..+|+++  +++..+.+++...
T Consensus       144 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~~  217 (226)
T 3mc1_A          144 KEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILEL  217 (226)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHHH
Confidence            3444456666666555689999999999999999999   88888323333 258899999  4588888777643

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=96.85  E-value=0.00037  Score=59.40  Aligned_cols=68  Identities=15%  Similarity=-0.010  Sum_probs=48.9

Q ss_pred             cCChhhHHHHHHhh-cCCCcEEEEecCCCCCCccccc----CCcceecCCCchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          247 RSSVPDKLLTVQSL-KPKGYVVAVTGDGTNDAPAPKV----ADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       247 ~~~P~~K~~iv~~l-~~~g~~v~~vGDG~ND~~al~~----Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      ..+|..|.+.++.+ .-....++|+||+.||.++++.    +.++++++ +..+..+..+|+++.  ++..+.+++
T Consensus       146 ~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l  218 (219)
T 3kd3_A          146 NGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI  218 (219)
T ss_dssp             TSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred             CCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence            34566777777665 5456789999999999999865    34455555 566777889999984  466665543

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=96.80  E-value=0.00075  Score=57.60  Aligned_cols=69  Identities=17%  Similarity=0.126  Sum_probs=52.9

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|+.|...++.+......++|+||+.||.++.+.|++++.+. ...+......+++. -+++..+.++++
T Consensus       129 p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~  197 (206)
T 1rku_A          129 RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPA-VHTYEDLKREFL  197 (206)
T ss_dssp             CSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence            5678899999999877789999999999999999999999985 44444334445542 256777776653

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=96.75  E-value=0.00058  Score=60.68  Aligned_cols=68  Identities=13%  Similarity=0.077  Sum_probs=51.0

Q ss_pred             ChhhHHHHHHhhcCCC-cEEEEecCCCCCCcccccCC---cceecCCCc------------------------hHHHHhc
Q 044334          249 SVPDKLLTVQSLKPKG-YVVAVTGDGTNDAPAPKVAD---IGPWMGIEG------------------------TKWAKEG  300 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g-~~v~~vGDG~ND~~al~~Ad---vgia~~~~~------------------------~~~a~~~  300 (358)
                      .|+--..+.+.+.-.. ..++++||+.||..+++.|+   +++++| ++                        .+..++.
T Consensus       162 ~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T 1swv_A          162 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVEN  240 (267)
T ss_dssp             SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhc
Confidence            4555667777777655 67999999999999999999   678887 43                        2333344


Q ss_pred             -CCEEEeCCCcchHHHHHHH
Q 044334          301 -SDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       301 -adiil~~~~~~~i~~~i~~  319 (358)
                       +|+++  +++..+..++..
T Consensus       241 ~ad~v~--~~~~el~~~l~~  258 (267)
T 1swv_A          241 GAHFTI--ETMQELESVMEH  258 (267)
T ss_dssp             TCSEEE--SSGGGHHHHHHH
T ss_pred             CCceec--cCHHHHHHHHHH
Confidence             99998  568888887754

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=96.54  E-value=0.00065  Score=58.64  Aligned_cols=68  Identities=12%  Similarity=-0.025  Sum_probs=51.0

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCchHHHHhc-CCEEEeCCCcchHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEGTKWAKEG-SDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~~~a~~~-adiil~~~~~~~i~~~i~~  319 (358)
                      |+--..+.+.+.-....++++||+.||..+.+.|++   ++++|.+..+..++. +|+++  +++..+..+++.
T Consensus       150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~  221 (233)
T 3s6j_A          150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE  221 (233)
T ss_dssp             THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred             hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence            455566667776656789999999999999999999   777764445554554 99998  458888877754

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.49  E-value=0.00043  Score=62.19  Aligned_cols=56  Identities=18%  Similarity=0.164  Sum_probs=45.9

Q ss_pred             hHHHHHHhh-cCCCcEEEEecC----CCCCCcccccCC-cceecCCCchHHHHhcCCEEEeCC
Q 044334          252 DKLLTVQSL-KPKGYVVAVTGD----GTNDAPAPKVAD-IGPWMGIEGTKWAKEGSDIIIMDD  308 (358)
Q Consensus       252 ~K~~iv~~l-~~~g~~v~~vGD----G~ND~~al~~Ad-vgia~~~~~~~~a~~~adiil~~~  308 (358)
                      .|..-++.| .-....|+++||    +.||.+||+.|+ +|++|+ ++.+..++.||+++..+
T Consensus       197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~  258 (262)
T 2fue_A          197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPET  258 (262)
T ss_dssp             STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC
T ss_pred             CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCC
Confidence            477777776 222457999999    999999999999 599998 99999999999887543

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.35  E-value=0.00075  Score=59.85  Aligned_cols=52  Identities=15%  Similarity=0.074  Sum_probs=40.7

Q ss_pred             hHHHHHHhh-cCCCcEEEEecC----CCCCCcccccCCc-ceecCCCchHHHHhcCCEE
Q 044334          252 DKLLTVQSL-KPKGYVVAVTGD----GTNDAPAPKVADI-GPWMGIEGTKWAKEGSDII  304 (358)
Q Consensus       252 ~K~~iv~~l-~~~g~~v~~vGD----G~ND~~al~~Adv-gia~~~~~~~~a~~~adii  304 (358)
                      .|..-++.| .-....|+++||    +.||.+||+.|+. |++|+ ++.+..|+.||+|
T Consensus       188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v  245 (246)
T 2amy_A          188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF  245 (246)
T ss_dssp             SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred             chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence            466666666 112457999999    9999999999987 99999 9999999998875

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=96.33  E-value=0.00093  Score=57.13  Aligned_cols=64  Identities=9%  Similarity=-0.105  Sum_probs=48.6

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      |+--..+.+.+.-....++++||+.||..+++.|+++++|. ++.+..+ .||+++.+.+=..+..
T Consensus       148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~  211 (221)
T 2wf7_A          148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEF  211 (221)
T ss_dssp             SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHH
T ss_pred             hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHH
Confidence            44555666777666678999999999999999999999998 6666666 8999986533333333

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=96.27  E-value=0.0038  Score=53.82  Aligned_cols=67  Identities=16%  Similarity=0.067  Sum_probs=52.5

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCC---cceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVAD---IGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Ad---vgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-....++++||+. ||..+.+.|+   ++++++ +..+..++.+|+++  +++..+..+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~--~~~~el~~~l~  227 (234)
T 3u26_A          157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIV--SDLREVIKIVD  227 (234)
T ss_dssp             SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEee--CCHHHHHHHHH
Confidence            34445667777776667899999998 9999999999   688888 66666677999998  45888777664

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=96.06  E-value=0.0048  Score=53.43  Aligned_cols=42  Identities=17%  Similarity=0.054  Sum_probs=33.1

Q ss_pred             ChhhHHHHHHhhc-CCC------cEEEEecCCCCCCcccccCCcceecC
Q 044334          249 SVPDKLLTVQSLK-PKG------YVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       249 ~P~~K~~iv~~l~-~~g------~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      .+..|.+.++.+. +.|      ..+.++||+.||.++++.|+.++++.
T Consensus       156 ~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~  204 (232)
T 3fvv_A          156 FREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN  204 (232)
T ss_dssp             STHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred             cchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence            3567876665543 233      57999999999999999999999986

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=95.80  E-value=0.0042  Score=53.29  Aligned_cols=66  Identities=9%  Similarity=0.029  Sum_probs=47.9

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc-eecCCCchH-------HHHhc-CCEEEeCCCcchHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG-PWMGIEGTK-------WAKEG-SDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg-ia~~~~~~~-------~a~~~-adiil~~~~~~~i~~~i~  318 (358)
                      |+--..+.+.+.-....++++||+.||..+++.|+++ +.++ ++..       ..++. +|+++.  ++..+..+++
T Consensus       146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~  220 (229)
T 2fdr_A          146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA  220 (229)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence            3444566666765566899999999999999999998 6676 4433       35555 999984  5777776653

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=95.78  E-value=0.0046  Score=53.31  Aligned_cols=65  Identities=23%  Similarity=0.214  Sum_probs=44.0

Q ss_pred             hhHHHHHHhhcCC-C-cEEEEecCCCCCCcccccCCcceecCCCc-hHHHHhcCCEEEeCCCcchHHHHH
Q 044334          251 PDKLLTVQSLKPK-G-YVVAVTGDGTNDAPAPKVADIGPWMGIEG-TKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       251 ~~K~~iv~~l~~~-g-~~v~~vGDG~ND~~al~~Advgia~~~~~-~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      ..|.++++.+.++ | ..++|+||+.||..+.+.|+++|+++... .+.....+|+++.  ++..+..++
T Consensus       156 ~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l  223 (225)
T 1nnl_A          156 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL  223 (225)
T ss_dssp             THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred             CchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence            3576666655332 3 57999999999999999999988887322 2344556898884  466655443

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=95.67  E-value=0.0019  Score=55.15  Aligned_cols=65  Identities=22%  Similarity=0.119  Sum_probs=43.9

Q ss_pred             hhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceec----CCCchHHHHhc-CCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWM----GIEGTKWAKEG-SDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~----~~~~~~~a~~~-adiil~~~~~~~i~~~i~  318 (358)
                      +-...+.+.+.-....++++||+.||.++++.|++++++    + +..+..+.. +|+++.  ++..+.+.++
T Consensus       149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l~  218 (225)
T 3d6j_A          149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVPE  218 (225)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC----
T ss_pred             HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence            444566666665556789999999999999999998877    3 333334444 899884  4666665553

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=95.62  E-value=0.0035  Score=54.17  Aligned_cols=54  Identities=17%  Similarity=0.006  Sum_probs=39.9

Q ss_pred             hHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeC
Q 044334          252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMD  307 (358)
Q Consensus       252 ~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~  307 (358)
                      --..+.+.+.-....++|+||+.||..+.+.|+++++|. +..+..+ .+|+++.+
T Consensus       151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s  204 (233)
T 3nas_A          151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQ  204 (233)
T ss_dssp             HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSS
T ss_pred             HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCC
Confidence            336677777766678999999999999999999999998 5555555 89999865

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=95.40  E-value=0.0031  Score=53.82  Aligned_cols=63  Identities=13%  Similarity=0.023  Sum_probs=47.8

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceec----CCCchHHHHhcCCEEEeCCCcchHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWM----GIEGTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~----~~~~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      |+-...+.+.++-....++++||+.||.++++.|++++++    + ++.+..+..||+++.  ++..+..
T Consensus       153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el~~  219 (226)
T 1te2_A          153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTELTA  219 (226)
T ss_dssp             THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGCCH
T ss_pred             hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHHhH
Confidence            5555667777776667899999999999999999999998    4 444455788999884  4555443

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=95.37  E-value=0.0092  Score=52.77  Aligned_cols=69  Identities=13%  Similarity=-0.034  Sum_probs=50.3

Q ss_pred             ChhhHHHHHHhhcCCC-cEEEEecCCCCCCcccccCC---cceecCCC-----------------------chHHHH-hc
Q 044334          249 SVPDKLLTVQSLKPKG-YVVAVTGDGTNDAPAPKVAD---IGPWMGIE-----------------------GTKWAK-EG  300 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g-~~v~~vGDG~ND~~al~~Ad---vgia~~~~-----------------------~~~~a~-~~  300 (358)
                      .|+--..+.+.+.-.. ..++||||+.||..+.+.|+   +++++|.+                       ..+..+ ..
T Consensus       170 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  249 (277)
T 3iru_A          170 FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAG  249 (277)
T ss_dssp             SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCC
Confidence            3445566777777666 78999999999999999999   56777732                       123333 45


Q ss_pred             CCEEEeCCCcchHHHHHHH
Q 044334          301 SDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       301 adiil~~~~~~~i~~~i~~  319 (358)
                      +|+++  +++..++.+++.
T Consensus       250 ad~v~--~~~~el~~~l~~  266 (277)
T 3iru_A          250 AHYVI--DSVADLETVITD  266 (277)
T ss_dssp             CSEEE--SSGGGTHHHHHH
T ss_pred             CCEEe--cCHHHHHHHHHH
Confidence            99999  558888887753

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=95.29  E-value=0.015  Score=50.47  Aligned_cols=68  Identities=12%  Similarity=0.032  Sum_probs=46.9

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc-eecCC-CchH--HHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG-PWMGI-EGTK--WAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg-ia~~~-~~~~--~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|++. +.+.. ....  ..+..+|+++.  ++..+..+++
T Consensus       167 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~  238 (247)
T 3dv9_A          167 NPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE  238 (247)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence            45556667777776667899999999999999999964 33331 2222  22347999984  5777776665

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=95.15  E-value=0.013  Score=48.64  Aligned_cols=66  Identities=15%  Similarity=0.008  Sum_probs=47.5

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCchHHHH----hcCCEEEeCCCcchHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEGTKWAK----EGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~~~a~----~~adiil~~~~~~~i~~~i~  318 (358)
                      |+--..+.+.+.-....+.|+||+.||..+.+.|++   ++.+| .+.....    ..+|+++.  ++..+.+.+.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~~--~l~el~~~l~  176 (179)
T 3l8h_A          104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVCE--DLAAVAEQLL  176 (179)
T ss_dssp             SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEES--SHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEec--CHHHHHHHHH
Confidence            444456667776666779999999999999999994   77777 5544443    45788884  4777776653

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=95.11  E-value=0.013  Score=50.36  Aligned_cols=64  Identities=16%  Similarity=0.052  Sum_probs=44.3

Q ss_pred             ChhhHHHHHHhhcCCCc-EEEEecCCCCCCcccccCCc-ceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGY-VVAVTGDGTNDAPAPKVADI-GPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~-~v~~vGDG~ND~~al~~Adv-gia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-... .++++||+.||..+.+.|++ ++.++ ++.+   ..++.++  +++..+.+++.
T Consensus       161 ~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~--~~~~el~~~l~  226 (231)
T 3kzx_A          161 SPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSF--KNFYDIRNFIC  226 (231)
T ss_dssp             SSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEE--SSHHHHHHHHH
T ss_pred             ChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceee--CCHHHHHHHHH
Confidence            34555677777776655 79999999999999999997 77776 4443   3567766  45777776654

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=95.10  E-value=0.0034  Score=52.55  Aligned_cols=61  Identities=13%  Similarity=0.027  Sum_probs=46.2

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc-eecCCCchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG-PWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg-ia~~~~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      |+--..+.+.++-....++++||+.||.++++.|+++ +.|+ ++. .   .+|+++.  ++..+.+++
T Consensus       143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l  204 (207)
T 2go7_A          143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF  204 (207)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred             cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence            4455667777776667899999999999999999997 8887 554 2   6888873  566666544

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=95.00  E-value=0.0094  Score=52.07  Aligned_cols=67  Identities=15%  Similarity=0.108  Sum_probs=48.8

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhc--CCEEEeCCCcchHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEG--SDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~--adiil~~~~~~~i~~~i~~  319 (358)
                      ..+|..+++.++.....++|+||+.||.++.+.|++.+... ...+.....  +|+++  +++..+..++..
T Consensus       149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~--~~~~el~~~l~~  217 (236)
T 2fea_A          149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPY--QDFYEIRKEIEN  217 (236)
T ss_dssp             SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred             CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence            34688999999877789999999999999999999988643 222223332  56655  568777776653

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=94.96  E-value=0.0088  Score=51.93  Aligned_cols=65  Identities=20%  Similarity=0.122  Sum_probs=47.7

Q ss_pred             hhhHHHHHHhhcCC-CcEEEEecCCCCCCcccccCCc---ceecCCCchHH--HHhcCCEEEeCCCcchHHHHH
Q 044334          250 VPDKLLTVQSLKPK-GYVVAVTGDGTNDAPAPKVADI---GPWMGIEGTKW--AKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       250 P~~K~~iv~~l~~~-g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~~~--a~~~adiil~~~~~~~i~~~i  317 (358)
                      |+--..+.+.+.-. ...++++||+.||..+.+.|++   ++++| .+...  .+..+|+++.  ++..+.+++
T Consensus       169 ~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--~~~el~~~l  239 (240)
T 3sd7_A          169 NEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVE--NVESIKDIL  239 (240)
T ss_dssp             HHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence            33345566666666 6789999999999999999999   77777 44332  3578999985  577777654

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=94.90  E-value=0.014  Score=50.13  Aligned_cols=60  Identities=15%  Similarity=0.078  Sum_probs=40.7

Q ss_pred             HHHhhc--CCCcEEEEecCCCCCCcccccCC---cceecCCCchHHHHh--cCCEEEeCCCcchHHHHHH
Q 044334          256 TVQSLK--PKGYVVAVTGDGTNDAPAPKVAD---IGPWMGIEGTKWAKE--GSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       256 iv~~l~--~~g~~v~~vGDG~ND~~al~~Ad---vgia~~~~~~~~a~~--~adiil~~~~~~~i~~~i~  318 (358)
                      +.+.+.  -....++++||+.||..+.+.|+   +++.++ ........  .+|+++.  ++..+..+++
T Consensus       160 ~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~--~~~el~~~l~  226 (234)
T 2hcf_A          160 ARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFK--NFAETDEVLA  226 (234)
T ss_dssp             HHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred             HHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence            344554  34457999999999999999999   666666 33333222  3898884  4667766654

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=94.90  E-value=0.01  Score=50.91  Aligned_cols=67  Identities=10%  Similarity=-0.049  Sum_probs=47.3

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceec---CCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWM---GIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~---~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-....++++||+. ||..+.+.|++++++   + +..+..+..+|+++  +++..+..+++
T Consensus       160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~--~~~~el~~~l~  230 (235)
T 2om6_A          160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEI--PSIANLKDVIE  230 (235)
T ss_dssp             CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred             CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchH--hhHHHHHHHHH
Confidence            34444556666665556899999999 999999999999988   4 22222234577776  45777776654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=94.79  E-value=0.0058  Score=53.66  Aligned_cols=64  Identities=16%  Similarity=0.108  Sum_probs=44.6

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCccee-cCC-C--chHHHHhcCCEEEeCCCcchHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPW-MGI-E--GTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia-~~~-~--~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      |+-...+.+.+.-....++|+||+.||.++.+.|+++.. +.. .  +.+..+..+|+++.  ++..+.+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~  240 (243)
T 2hsz_A          173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK  240 (243)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred             HHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence            445556777776666789999999999999999998743 321 1  23344678899884  4665543

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=94.66  E-value=0.0079  Score=51.95  Aligned_cols=67  Identities=18%  Similarity=0.035  Sum_probs=47.2

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc-eecCC-CchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG-PWMGI-EGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg-ia~~~-~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+-...+.+.+.-....++|+||+.||.++.+.|++. +.+.. ...... ..+|+++  +++..+..++.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~  209 (222)
T 2nyv_A          141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD  209 (222)
T ss_dssp             TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred             ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence            46666777777776667899999999999999999977 44431 222111 5688887  45777776654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=94.65  E-value=0.0065  Score=53.06  Aligned_cols=68  Identities=13%  Similarity=0.044  Sum_probs=49.9

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC----Cch---HH--HHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI----EGT---KW--AKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~----~~~---~~--a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|+++++|..    .|.   +.  .+..+|+++  +++..+..++.
T Consensus       175 ~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~  251 (254)
T 3umc_A          175 DPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA  251 (254)
T ss_dssp             SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence            3444556667776566789999999999999999999999973    122   11  256789998  45877777664

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=94.57  E-value=0.0043  Score=53.49  Aligned_cols=68  Identities=6%  Similarity=-0.024  Sum_probs=52.1

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceec----CCCchHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWM----GIEGTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~----~~~~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      .|+--..+.+.+.-....++|+||+.||..+.+.|+++.++    + +..+..+..+|+++  +++..+..++..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~--~~~~el~~~l~~  228 (233)
T 3umb_A          157 APAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAG--HDMRDLLQFVQA  228 (233)
T ss_dssp             SHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEE--CCHHHHHHHHHH
Confidence            34455566677766667899999999999999999999998    5 44444566799998  458888877753

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=94.47  E-value=0.0042  Score=54.45  Aligned_cols=62  Identities=13%  Similarity=0.043  Sum_probs=46.5

Q ss_pred             hhhHHHHHHhhcCCC--cEEEEecCCCCCCcccccCC---cceecCCCchHHHHhcCCEEEeCCCcchHH
Q 044334          250 VPDKLLTVQSLKPKG--YVVAVTGDGTNDAPAPKVAD---IGPWMGIEGTKWAKEGSDIIIMDDNFTSVV  314 (358)
Q Consensus       250 P~~K~~iv~~l~~~g--~~v~~vGDG~ND~~al~~Ad---vgia~~~~~~~~a~~~adiil~~~~~~~i~  314 (358)
                      |+--..+.+.+.-.-  ..++++||+.||..+.+.|+   ++++++ ++.+..+..+|+++.  ++..+.
T Consensus       174 ~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el~  240 (250)
T 3l5k_A          174 PDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDFQ  240 (250)
T ss_dssp             THHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGCC
T ss_pred             hHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHhh
Confidence            444455666666544  78999999999999999999   677777 556667789999984  455553

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=94.44  E-value=0.025  Score=48.18  Aligned_cols=68  Identities=6%  Similarity=-0.125  Sum_probs=44.3

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceecCC------CchHHHHhcC-CEEEeCCCcchHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGI------EGTKWAKEGS-DIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~------~~~~~a~~~a-diil~~~~~~~i~~~i  317 (358)
                      -.|+--..+.+.+.-....++++||+. ||..+.+.|+++.++=.      .+....+..+ |+++  +++..+..++
T Consensus       158 pk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l  233 (234)
T 3ddh_A          158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL  233 (234)
T ss_dssp             CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred             CCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence            345555556666665567899999997 99999999999877610      2222223344 7776  4577776543

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=94.41  E-value=0.015  Score=50.68  Aligned_cols=67  Identities=13%  Similarity=0.107  Sum_probs=48.0

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc-eecCCCchH----HHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG-PWMGIEGTK----WAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg-ia~~~~~~~----~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|++. +.+. ++..    ..+..+|+++  +++..+..+++
T Consensus       168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~--~s~~el~~~l~  239 (243)
T 3qxg_A          168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLF--PSMQTLCDSWD  239 (243)
T ss_dssp             SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred             ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence            45556667777776667899999999999999999984 4444 3322    2234699998  45877776664

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=94.36  E-value=0.012  Score=52.17  Aligned_cols=47  Identities=23%  Similarity=0.133  Sum_probs=37.8

Q ss_pred             hHHHHHHhhcCCCcEEEEecC----CCCCCcccccCC-cceecCCCchHHHHh
Q 044334          252 DKLLTVQSLKPKGYVVAVTGD----GTNDAPAPKVAD-IGPWMGIEGTKWAKE  299 (358)
Q Consensus       252 ~K~~iv~~l~~~g~~v~~vGD----G~ND~~al~~Ad-vgia~~~~~~~~a~~  299 (358)
                      .|..-++.|.+....++++||    |.||.+||+.|+ +|++++ ++.+..+.
T Consensus       187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~  238 (246)
T 3f9r_A          187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAE  238 (246)
T ss_dssp             SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHH
T ss_pred             CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHH
Confidence            466666666655568999999    799999999995 899999 77777664

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=94.10  E-value=0.0057  Score=52.48  Aligned_cols=67  Identities=10%  Similarity=-0.068  Sum_probs=49.2

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC---CchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI---EGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~---~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|++++.+-.   +..+..+..+|+++.  ++..+..++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l  223 (230)
T 3um9_A          154 HQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF  223 (230)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred             ChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence            3455566777776666789999999999999999999999821   334444568898884  477666554

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=93.95  E-value=0.053  Score=46.53  Aligned_cols=68  Identities=16%  Similarity=0.094  Sum_probs=46.9

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc----ceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI----GPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv----gia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|+--..+.+.+.-....++||||+.||..+.+.|++    ++..|....+.....+|+++  +++..+.+++.
T Consensus       133 ~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~el~~~l~  204 (211)
T 2gmw_A          133 HPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK  204 (211)
T ss_dssp             SCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHHHHHHHH
Confidence            4555566667776555678999999999999999995    44444222233345689888  45888777654

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=93.92  E-value=0.026  Score=48.46  Aligned_cols=66  Identities=11%  Similarity=0.088  Sum_probs=47.5

Q ss_pred             hhhHHHHHHhhc-CCCcEEEEecCCC-CCCcccccCCcce-ecCCCc--hHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          250 VPDKLLTVQSLK-PKGYVVAVTGDGT-NDAPAPKVADIGP-WMGIEG--TKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       250 P~~K~~iv~~l~-~~g~~v~~vGDG~-ND~~al~~Advgi-a~~~~~--~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      |+--..+.+.+. -....++++||+. ||..+.+.|+++. .++ .+  .+..+..+|+++  +++..+.++++
T Consensus       161 ~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~--~~~~el~~~l~  231 (238)
T 3ed5_A          161 KEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEI--RKLEELYHILN  231 (238)
T ss_dssp             HHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred             hHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence            444555666665 4556899999998 9999999999953 333 33  445566889998  45888887764

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=93.82  E-value=0.014  Score=50.65  Aligned_cols=68  Identities=18%  Similarity=0.129  Sum_probs=48.9

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCC----ch----HH-HHhcCCEEEeCCCcchHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIE----GT----KW-AKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~----~~----~~-a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      |+--..+.+.+.-....++++||+.||..+.+.|+++++|...    |.    +. .+..+|+++  +++..+..++..
T Consensus       172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~  248 (254)
T 3umg_A          172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA  248 (254)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence            4444455566655556899999999999999999999998731    11    01 356789998  458888877753

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=93.66  E-value=0.028  Score=49.38  Aligned_cols=67  Identities=10%  Similarity=-0.056  Sum_probs=49.3

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc-eecCCCc-------h-HHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG-PWMGIEG-------T-KWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg-ia~~~~~-------~-~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      |+--..+.+.+.-....++++||+.||..+.+.|+++ +.+. .+       . +..+..+|+++  +++..+.++++.
T Consensus       171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~  246 (259)
T 4eek_A          171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE  246 (259)
T ss_dssp             SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence            4445667777776667899999999999999999998 4443 22       2 23345589998  458888888764

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=93.63  E-value=0.024  Score=48.58  Aligned_cols=68  Identities=6%  Similarity=-0.041  Sum_probs=48.0

Q ss_pred             ChhhHHHH---HHhhcCCCcEEEEecCCC-CCCcccccCCcceecCCCc----------hHHHHhcCCEEEeCCCcchHH
Q 044334          249 SVPDKLLT---VQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGIEG----------TKWAKEGSDIIIMDDNFTSVV  314 (358)
Q Consensus       249 ~P~~K~~i---v~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~~~----------~~~a~~~adiil~~~~~~~i~  314 (358)
                      .|+-....   .+.+.-....++++||+. ||..+.+.|+++.+|...+          .+..+..+|+++  +++..+.
T Consensus       154 ~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~  231 (240)
T 3smv_A          154 NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMA  231 (240)
T ss_dssp             SHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHH
Confidence            44444455   455555556799999996 9999999999999984221          123347889998  4577777


Q ss_pred             HHHH
Q 044334          315 TDQR  318 (358)
Q Consensus       315 ~~i~  318 (358)
                      +++.
T Consensus       232 ~~l~  235 (240)
T 3smv_A          232 EAHK  235 (240)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6664

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=93.57  E-value=0.0057  Score=54.85  Aligned_cols=66  Identities=6%  Similarity=-0.081  Sum_probs=47.5

Q ss_pred             ChhhHHHHHHhhcCCC-cEEEEecCCCCCCcccccCCcceecCCCchHHH------HhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKG-YVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWA------KEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g-~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a------~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+.+.+.-.. ..++|+||+.||..+.+.|++|.+|+ ......      ...+|+++  +++..+++++
T Consensus       206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l  278 (282)
T 3nuq_A          206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVI--SDILELPHVV  278 (282)
T ss_dssp             SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred             CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence            4455556667776665 78999999999999999999998886 333222      23778888  4577666554

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=93.55  E-value=0.0068  Score=51.45  Aligned_cols=63  Identities=8%  Similarity=0.043  Sum_probs=44.6

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC--C-chHHHHhcCCEEEeCCCcchHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI--E-GTKWAKEGSDIIIMDDNFTSVVT  315 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~--~-~~~~a~~~adiil~~~~~~~i~~  315 (358)
                      |+-...+.+.++-....++++||+.||..+.+.|++++.+..  . ..+..++ +|+++.  ++..+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~  206 (209)
T 2hdo_A          141 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE  206 (209)
T ss_dssp             SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred             cHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence            444466777777666789999999999999999999988631  1 2333344 898884  4555543

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=93.19  E-value=0.032  Score=47.89  Aligned_cols=67  Identities=6%  Similarity=-0.097  Sum_probs=48.3

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceecCCCchH-HHHhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGIEGTK-WAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~~~~~-~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+.+.+.-....++++||+. ||..+.+.|+++++|...+.. ..+..+|+++.  ++..+..+.
T Consensus       164 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~~  232 (240)
T 3qnm_A          164 RPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNLL  232 (240)
T ss_dssp             SHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHHT
T ss_pred             CHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHHH
Confidence            34445556666665567899999996 999999999999998733331 44567899984  466666543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=92.88  E-value=0.0094  Score=50.16  Aligned_cols=64  Identities=14%  Similarity=0.166  Sum_probs=46.7

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCc-hHHHHhcCCEEEeCCCcchHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEG-TKWAKEGSDIIIMDDNFTSVV  314 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~-~~~a~~~adiil~~~~~~~i~  314 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|+++..+..++ ....+..+|+++.  ++..+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~  211 (214)
T 3e58_A          147 NPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL  211 (214)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred             ChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence            355556777777766678999999999999999999988875332 3333467888884  465554

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=92.66  E-value=0.078  Score=44.98  Aligned_cols=69  Identities=17%  Similarity=0.121  Sum_probs=43.9

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc----eecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG----PWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg----ia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|+--....+.+.-.-..++||||..+|..+-+.|++.    +..|.+..+..+++.+..+.+  +..+.+.++
T Consensus       141 P~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~  213 (216)
T 3kbb_A          141 PDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK  213 (216)
T ss_dssp             TSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred             ccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence            345556667777776667899999999999999998874    333433344444554444433  444555443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=92.64  E-value=0.026  Score=50.45  Aligned_cols=58  Identities=21%  Similarity=0.077  Sum_probs=40.0

Q ss_pred             hhhHHHHHHhhcC-------CCcEEEEecCCCCCCcccccCCcceec---CCCchHHHHhcCCEEEeC
Q 044334          250 VPDKLLTVQSLKP-------KGYVVAVTGDGTNDAPAPKVADIGPWM---GIEGTKWAKEGSDIIIMD  307 (358)
Q Consensus       250 P~~K~~iv~~l~~-------~g~~v~~vGDG~ND~~al~~Advgia~---~~~~~~~a~~~adiil~~  307 (358)
                      |+--..+.+.+.-       ....++++||+.||..+++.|++++.+   +.+..+..+..||+++.+
T Consensus       173 ~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~  240 (275)
T 2qlt_A          173 PEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN  240 (275)
T ss_dssp             SHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred             hHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence            4445566667765       556799999999999999999966554   523233333358988743

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=92.43  E-value=0.082  Score=45.07  Aligned_cols=68  Identities=13%  Similarity=0.056  Sum_probs=49.5

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceec---CCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWM---GIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~---~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..|+--..+.+.+.-....++|+||+. ||..+.+.|+++..+   +....+. ...+|+++  +++..+.+++.
T Consensus       156 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~  227 (230)
T 3vay_A          156 PDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA  227 (230)
T ss_dssp             TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred             cCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence            345555677777776667899999998 999999999988776   2122222 56788888  45888887664

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=92.13  E-value=0.16  Score=43.79  Aligned_cols=66  Identities=18%  Similarity=0.118  Sum_probs=45.4

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceec---CCCchHHHHh---cCCEEEeCCCcchHHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWM---GIEGTKWAKE---GSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~---~~~~~~~a~~---~adiil~~~~~~~i~~~i~  318 (358)
                      |+--..+.+.+.-....++|+||+. ||..+.+.|+++...   | ........   .+|+++  +++..+..++.
T Consensus       153 ~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i--~~~~el~~~l~  225 (241)
T 2hoq_A          153 PKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEI--DNLESLLEVLA  225 (241)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence            3444556666665566799999998 999999999986543   4 33333332   689887  45777776654

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=91.87  E-value=0.043  Score=48.60  Aligned_cols=70  Identities=20%  Similarity=0.135  Sum_probs=49.5

Q ss_pred             eecCChhhHHHHHHhhcCCCcEEEEecCC-CCCCcccccCC---cceecCCCchHHHHh--------cCCEEEeCCCcch
Q 044334          245 TARSSVPDKLLTVQSLKPKGYVVAVTGDG-TNDAPAPKVAD---IGPWMGIEGTKWAKE--------GSDIIIMDDNFTS  312 (358)
Q Consensus       245 ~a~~~P~~K~~iv~~l~~~g~~v~~vGDG-~ND~~al~~Ad---vgia~~~~~~~~a~~--------~adiil~~~~~~~  312 (358)
                      .....|+--..+.+.+.-....++|+||+ .||..+.+.|+   +++.+| .+.....+        .+|+++.  ++..
T Consensus       185 ~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g-~~~~~~~~~~~~~~~~~~d~v~~--~~~e  261 (268)
T 3qgm_A          185 VGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTG-VTTRENLDQMIERHGLKPDYVFN--SLKD  261 (268)
T ss_dssp             CSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS-SCCTTTHHHHHHHHTCCCSEEES--SHHH
T ss_pred             cCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCC-CCCHHHHHhhccccCCCCCEEEC--CHHH
Confidence            33445565666777777666789999999 59999999999   688888 44432222        6899884  5766


Q ss_pred             HHHHH
Q 044334          313 VVTDQ  317 (358)
Q Consensus       313 i~~~i  317 (358)
                      +.+++
T Consensus       262 l~~~l  266 (268)
T 3qgm_A          262 MVEAL  266 (268)
T ss_dssp             HHHTC
T ss_pred             HHHHH
Confidence            66544

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=91.69  E-value=0.044  Score=46.04  Aligned_cols=64  Identities=11%  Similarity=-0.004  Sum_probs=43.8

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceec-C--CCchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWM-G--IEGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~-~--~~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      |+--..+.+.++  ...++|+||+.||..+.+.|+++..+ .  .+..+.....+|.++.  ++..+..++
T Consensus       131 ~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l  197 (201)
T 2w43_A          131 PKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI  197 (201)
T ss_dssp             HHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred             HHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence            455566667776  45788999999999999999998766 1  1222222346888774  466666554

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=91.52  E-value=0.041  Score=45.53  Aligned_cols=50  Identities=14%  Similarity=0.032  Sum_probs=36.0

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcC
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGS  301 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~a  301 (358)
                      .|+--..+.+.+.-.  .++++||+.||..+.+.|++++.+- +.....++..
T Consensus       139 ~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l  188 (190)
T 2fi1_A          139 NPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVL  188 (190)
T ss_dssp             SCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhcc
Confidence            344455666666544  7899999999999999999988876 4444444443

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=91.49  E-value=0.043  Score=48.07  Aligned_cols=68  Identities=12%  Similarity=-0.036  Sum_probs=49.0

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCC-----------------------c---hHHHHhcCC
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIE-----------------------G---TKWAKEGSD  302 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~-----------------------~---~~~a~~~ad  302 (358)
                      .|+--..+.+.+.-....++|+||+.||..+.+.|+++..+...                       +   .+..+..+|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  228 (253)
T 1qq5_A          149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPD  228 (253)
T ss_dssp             SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCS
T ss_pred             CHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCC
Confidence            44555666777765556799999999999999999999887623                       1   112235688


Q ss_pred             EEEeCCCcchHHHHHH
Q 044334          303 IIIMDDNFTSVVTDQR  318 (358)
Q Consensus       303 iil~~~~~~~i~~~i~  318 (358)
                      +++  +++..+..++.
T Consensus       229 ~~~--~~~~el~~~l~  242 (253)
T 1qq5_A          229 FVV--PALGDLPRLVR  242 (253)
T ss_dssp             EEE--SSGGGHHHHHH
T ss_pred             eee--CCHHHHHHHHH
Confidence            888  45888877664

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=91.31  E-value=0.042  Score=47.59  Aligned_cols=66  Identities=5%  Similarity=-0.136  Sum_probs=45.3

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCchHHHHhcC-CEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEGTKWAKEGS-DIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~~~~a~~~a-diil~~~~~~~i~~~i  317 (358)
                      .|+-...+.+.+.-....++++||+.||..+.+.|++   ++..+ ...+..+..+ |+++  +++..+..++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l  232 (240)
T 2no4_A          163 DPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQV--NSLSELWPLL  232 (240)
T ss_dssp             SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred             CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceee--CCHHHHHHHH
Confidence            4445556667776666679999999999999999994   44455 2222223456 8887  4577777655

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=91.22  E-value=0.075  Score=45.15  Aligned_cols=59  Identities=17%  Similarity=0.050  Sum_probs=40.6

Q ss_pred             HHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCc-hHHHH-hcCCEEEeCCCcchHHHH
Q 044334          255 LTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEG-TKWAK-EGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       255 ~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~-~~~a~-~~adiil~~~~~~~i~~~  316 (358)
                      .+.+.+.-....++|+||+.||+.+.+.|++   ++++| .+ .+..+ ..+|+++.  ++..+..+
T Consensus       145 ~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~--~~~el~~~  208 (210)
T 2ah5_A          145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAH--KPLEVLAY  208 (210)
T ss_dssp             HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred             HHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence            3344444444679999999999999999998   77777 44 33333 36898884  46655543

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=90.98  E-value=0.1  Score=45.24  Aligned_cols=66  Identities=14%  Similarity=0.128  Sum_probs=43.7

Q ss_pred             hhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc---eecCCCchHHH-HhcCCEEEeCCCcchHHHHH
Q 044334          250 VPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG---PWMGIEGTKWA-KEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       250 P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg---ia~~~~~~~~a-~~~adiil~~~~~~~i~~~i  317 (358)
                      |+-=..+.+.+.-....++|+||+.||..+.+.|++.   +.++....+.. ...+|.++.  ++..+...+
T Consensus       168 p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l  237 (240)
T 2hi0_A          168 PDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI  237 (240)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence            3434555666665566899999999999999999984   55552222333 346888874  466665544

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=90.91  E-value=0.085  Score=45.33  Aligned_cols=59  Identities=14%  Similarity=0.032  Sum_probs=39.4

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCC-CCCCcccccCCcce---ecCCCchHHHH---hcCCEEEeC
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDG-TNDAPAPKVADIGP---WMGIEGTKWAK---EGSDIIIMD  307 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG-~ND~~al~~Advgi---a~~~~~~~~a~---~~adiil~~  307 (358)
                      .|+--..+.+.+.-....++++||+ .||..+++.|+++.   .+|....+..+   ..+|+++.+
T Consensus       178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~  243 (250)
T 2c4n_A          178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS  243 (250)
T ss_dssp             STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred             CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence            3444455556665555689999999 69999999999884   44522223333   468888743

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=90.41  E-value=0.029  Score=48.23  Aligned_cols=67  Identities=12%  Similarity=-0.042  Sum_probs=46.4

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCC---CchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGI---EGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~---~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+-...+.+.+.-....++|+||+.||..+.+.|+++..+-.   +..+..+..+|+++  +++..+..++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l  222 (232)
T 1zrn_A          153 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF  222 (232)
T ss_dssp             SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred             CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence            4445556677776555678999999999999999999988721   22223345678887  3466665544

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=90.27  E-value=0.7  Score=39.94  Aligned_cols=69  Identities=6%  Similarity=-0.064  Sum_probs=47.1

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceecCCCchH--------HHHhcCCE-EEeCCCcchHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGIEGTK--------WAKEGSDI-IIMDDNFTSVVTDQ  317 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~~~~~--------~a~~~adi-il~~~~~~~i~~~i  317 (358)
                      ..|+--..+.+.+.-....++++||+. ||..+.+.|++++.+=..+..        .....+|+ ++  +++..+..++
T Consensus       163 p~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l  240 (251)
T 2pke_A          163 KDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAV  240 (251)
T ss_dssp             CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHH
T ss_pred             CCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHH
Confidence            345555667777776667899999999 999999999998775323321        11245787 66  4588887766


Q ss_pred             H
Q 044334          318 R  318 (358)
Q Consensus       318 ~  318 (358)
                      +
T Consensus       241 ~  241 (251)
T 2pke_A          241 R  241 (251)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=90.11  E-value=0.069  Score=47.19  Aligned_cols=70  Identities=10%  Similarity=0.099  Sum_probs=52.0

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceecCCCchHH-----HHhcCCEEEeCCCcchHHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGIEGTKW-----AKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~~~~~~-----a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      ..|+--..+.+.+.-....++||||+. ||..+.+.|+++..+...+...     ....+|+++  +++..+..++..
T Consensus       162 p~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~~  237 (263)
T 3k1z_A          162 PDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALDC  237 (263)
T ss_dssp             TSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHHH
Confidence            355666777777776667899999997 9999999999999886333211     223688888  458888887753

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=89.05  E-value=0.24  Score=43.16  Aligned_cols=67  Identities=13%  Similarity=0.039  Sum_probs=44.0

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceecCCCc---hH-HHH--hcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGIEG---TK-WAK--EGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~~~---~~-~a~--~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+.+.+.-....++++||+. ||..+++.|+.++++=..+   .+ ...  ..+|+++.  ++..+.+.+
T Consensus       192 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~--~~~el~~~l  265 (271)
T 2x4d_A          192 SPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVD--NLAEAVDLL  265 (271)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEES--SHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeC--CHHHHHHHH
Confidence            34444555566665556899999998 9999999999987752133   11 111  23788874  476666544

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=88.50  E-value=0.51  Score=39.34  Aligned_cols=75  Identities=11%  Similarity=-0.037  Sum_probs=52.5

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCC-CCCCcccccCCcceecCCCchH-----HH-HhcCCEEEeCCCcchHHHHHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDG-TNDAPAPKVADIGPWMGIEGTK-----WA-KEGSDIIIMDDNFTSVVTDQRWGR  321 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG-~ND~~al~~Advgia~~~~~~~-----~a-~~~adiil~~~~~~~i~~~i~~~r  321 (358)
                      .|+--..+.+.+.-....++||||+ .+|..+-+.+++....-..+..     .. ...+|.++...++..+.+++++.+
T Consensus        99 ~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~  178 (189)
T 3ib6_A           99 DKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK  178 (189)
T ss_dssp             SHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence            4555666777777666789999999 7999999999885433112221     11 127789997668999999988765


Q ss_pred             HH
Q 044334          322 CV  323 (358)
Q Consensus       322 ~~  323 (358)
                      .-
T Consensus       179 ~~  180 (189)
T 3ib6_A          179 KI  180 (189)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=88.24  E-value=0.15  Score=44.97  Aligned_cols=69  Identities=12%  Similarity=0.002  Sum_probs=45.3

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCC-CCCCcccccCCcceecCCC---chHHHHh---cCCEEEeCCCcchHHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDG-TNDAPAPKVADIGPWMGIE---GTKWAKE---GSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG-~ND~~al~~Advgia~~~~---~~~~a~~---~adiil~~~~~~~i~~~i~  318 (358)
                      ..|.--..+.+.+.-.-..++|+||+ .||..+++.|+++..+...   ..+..++   .+|+++.  ++..+..-++
T Consensus       184 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~--~~~el~~~~~  259 (266)
T 3pdw_A          184 PESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID--SLTEWIPYIE  259 (266)
T ss_dssp             TSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES--SGGGGHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC--CHHHHHHHhh
Confidence            34455556667776656789999999 7999999999986655322   2333344   4999984  4666665443

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=87.96  E-value=0.1  Score=49.51  Aligned_cols=41  Identities=20%  Similarity=0.139  Sum_probs=30.8

Q ss_pred             ChhhHHHHHHhhcCC--C-cEEEEecCCCCCCccccc-CCcceec
Q 044334          249 SVPDKLLTVQSLKPK--G-YVVAVTGDGTNDAPAPKV-ADIGPWM  289 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~--g-~~v~~vGDG~ND~~al~~-Advgia~  289 (358)
                      ..+.|...|+.+-..  | ..++++|||.||.+||+. +|.++.+
T Consensus       294 ~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l  338 (385)
T 4gxt_A          294 IREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL  338 (385)
T ss_dssp             STHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred             CCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence            457799999886422  2 368889999999999985 6666654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=87.63  E-value=0.13  Score=42.93  Aligned_cols=34  Identities=6%  Similarity=-0.219  Sum_probs=25.6

Q ss_pred             HHHHHhhcCCCcEEEEecCCCCCCcccccCCcce
Q 044334          254 LLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGP  287 (358)
Q Consensus       254 ~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgi  287 (358)
                      ..+.+.+.-....++|+||+.||..+.+.|++..
T Consensus       127 ~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~  160 (187)
T 2wm8_A          127 ERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC  160 (187)
T ss_dssp             HHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred             HHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence            4445555544567899999999999999988743

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=83.96  E-value=0.18  Score=42.36  Aligned_cols=42  Identities=10%  Similarity=-0.005  Sum_probs=34.5

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      .|+--..+.+.+.-....++++||+.||..+.+.|+++..+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~  193 (211)
T 2i6x_A          152 NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP  193 (211)
T ss_dssp             SHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred             CHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence            445556677777666678999999999999999999998886

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=82.80  E-value=0.47  Score=41.71  Aligned_cols=68  Identities=16%  Similarity=0.125  Sum_probs=45.0

Q ss_pred             CChhhHHHHHHhhcCCCcEEEEecCCC-CCCcccccCCcceecCCCc--h-HHHHh---cCCEEEeCCCcchHHHHH
Q 044334          248 SSVPDKLLTVQSLKPKGYVVAVTGDGT-NDAPAPKVADIGPWMGIEG--T-KWAKE---GSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       248 ~~P~~K~~iv~~l~~~g~~v~~vGDG~-ND~~al~~Advgia~~~~~--~-~~a~~---~adiil~~~~~~~i~~~i  317 (358)
                      ..|+--..+.+.+.-....++|+||+. ||..+++.|+++..+-..|  . +....   .+|+++  +++..+.+++
T Consensus       196 pk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i--~~l~el~~~l  270 (271)
T 1vjr_A          196 PNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV  270 (271)
T ss_dssp             TSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence            345555556666665566899999995 9999999999988762122  2 22222   578887  4466665543

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=81.50  E-value=0.42  Score=39.72  Aligned_cols=42  Identities=7%  Similarity=-0.088  Sum_probs=33.9

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      .|+-...+.+.+.-....++++||+.||..+.+.|++...+-
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~  191 (206)
T 2b0c_A          150 EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV  191 (206)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred             CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence            445566677777766678999999999999999999887765

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=80.37  E-value=0.51  Score=39.11  Aligned_cols=42  Identities=7%  Similarity=-0.011  Sum_probs=33.3

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      .|+--..+.+.+.-....++|+||+.||..+.+.|++...+-
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~  184 (200)
T 3cnh_A          143 NPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC  184 (200)
T ss_dssp             CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred             CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence            455555666777666667999999999999999999887764

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=80.29  E-value=0.82  Score=35.16  Aligned_cols=38  Identities=5%  Similarity=-0.074  Sum_probs=28.5

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG  286 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg  286 (358)
                      .|+--..+.+.+.-....+.|+||+.+|..+.+.+++-
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~  113 (137)
T 2pr7_A           76 EEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV  113 (137)
T ss_dssp             SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred             CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence            45555566666665556799999999999888888763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	358
d1wpga2	168	c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca	2e-12
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	3e-08
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	6e-07
d2b8ea1	135	c.108.1.7 (A:416-434,A:548-663) Cation-transportin	4e-06
d1wpga4	472	f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP	0.004

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 62.5 bits (151), Expect = 2e-12
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 216 EADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTN 275
           E  D    G +F +L   E           AR     K   V+ L+    + A+TGDG N
Sbjct: 65  EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVN 124

Query: 276 DAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWG 320
           DAPA K A+IG  MG  GT  AK  S++++ DDNF+++V     G
Sbjct: 125 DAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.1 bits (121), Expect = 3e-08
 Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 1/84 (1%)

Query: 246 ARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIII 305
           +      K   +  L      + + GD   D  A K++D+            +E +   +
Sbjct: 143 SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHL 201

Query: 306 MDDNFTSVVTDQRWGRCVNNNIQK 329
              +F  +  +    + V   +Q 
Sbjct: 202 PYQDFYEIRKEIENVKEVQEWLQN 225

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 48.3 bits (114), Expect = 6e-07
 Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 10/127 (7%)

Query: 191 GMNRNNTDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAK---IENIRVTAR 247
           G     T V  ++L  + +          +V+E       +   G               
Sbjct: 239 GRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNN 298

Query: 248 SSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVAD---IGPWMGIEGTKWAKE----G 300
               +  +  Q        V + GD   D  + +      IG   G++G   A E     
Sbjct: 299 RDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHH 358

Query: 301 SDIIIMD 307
           +D +I  
Sbjct: 359 ADYVINH 365

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 43.5 bits (102), Expect = 4e-06
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDD 308
               K   V+ L+    VVA  GDG NDAPA   AD+G      G+  A E  DI+++ D
Sbjct: 68  LPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRD 125

Query: 309 NFTSVVT 315
           +   VV 
Sbjct: 126 DLRDVVA 132

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 115 EFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL 149
           + +   + +   IY    AV + V AIPEGLP  +
Sbjct: 166 DPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVI 200

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	358
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	99.89
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	99.85
d1wpga1	115	Calcium ATPase, transduction domain A {Rabbit (Ory	99.31
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.02
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.58
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.55
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.49
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.41
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.21
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.17
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	98.17
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.16
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.14
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.07
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.05
d1wpga4	472	Calcium ATPase, transmembrane domain M {Rabbit (Or	98.02
d1wpga3	239	Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta	97.96
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.96
d1q3ia_	214	Sodium/potassium-transporting ATPase alpha chain {	97.78
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.73
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	97.44
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.09
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.41
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.23
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.18
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	91.72
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	90.66
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	90.58
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	89.7
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	87.3
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	84.23
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	80.73

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.89  E-value=4.5e-24  Score=179.96  Aligned_cols=99  Identities=36%  Similarity=0.488  Sum_probs=87.0

Q ss_pred             eeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhc
Q 044334          221 VIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEG  300 (358)
Q Consensus       221 ~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~  300 (358)
                      .++|.++..++..+..+......+|+|++|+||..+++.||+.|++|+|+|||.||+|||++|||||+++ +++++|+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~a  148 (168)
T d1wpga2          70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTA  148 (168)
T ss_dssp             EEEHHHHHHSCHHHHHHHHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHT
T ss_pred             cccccccchhhHHHHhhhhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHh
Confidence            3444444444444555555667899999999999999999999999999999999999999999999999 999999999


Q ss_pred             CCEEEeCCCcchHHHHHHHH
Q 044334          301 SDIIIMDDNFTSVVTDQRWG  320 (358)
Q Consensus       301 adiil~~~~~~~i~~~i~~~  320 (358)
                      ||+++++++|+.++++|+||
T Consensus       149 Adivl~~~~l~~v~~~I~~G  168 (168)
T d1wpga2         149 SEMVLADDNFSTIVAAVEEG  168 (168)
T ss_dssp             CSEEETTCCTHHHHHHHHHH
T ss_pred             CCEEEccCCHHHHHHHHHcC
Confidence            99999999999999999986

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=4.4e-22  Score=161.36  Aligned_cols=105  Identities=33%  Similarity=0.443  Sum_probs=88.6

Q ss_pred             hHHHhccCceEEEEeeccccCCceeeecccccccchhhhhhccccceeeecCChhhHHHHHHhhcCCCcEEEEecCCCCC
Q 044334          197 TDVAAKSLRCMAFARTKVAEADDEVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKLLTVQSLKPKGYVVAVTGDGTND  276 (358)
Q Consensus       197 ~~~a~~G~rvl~~a~~~~~~~~~~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND  276 (358)
                      +.+.+.|.++             .++|||+..  ..+.+++.++...++++++|++|..+++.+|++ ++|+|+|||.||
T Consensus        31 ~~L~~~Gi~v-------------~ilTGD~~~--~a~~ia~~lgI~~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD   94 (135)
T d2b8ea1          31 QELKRMGIKV-------------GMITGDNWR--SAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGIND   94 (135)
T ss_dssp             HHHHHTTCEE-------------EEECSSCHH--HHHHHHHHHTCSEEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSS
T ss_pred             HHHHHcCCEE-------------EEEcCcchh--hhhHHHhhhhhhhhccccchhHHHHHHHHHHcC-CEEEEEeCCCCc
Confidence            4666778887             699999977  677899999999999999999999999999875 599999999999


Q ss_pred             CcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          277 APAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       277 ~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +|||+.|||||+|+ ++++.++++||+++++++|+.|+++|+
T Consensus        95 ~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~  135 (135)
T d2b8ea1          95 APALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ  135 (135)
T ss_dssp             HHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred             HHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence            99999999999999 899999999999999999999998874

>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.31  E-value=2.3e-13  Score=105.98  Aligned_cols=53  Identities=28%  Similarity=0.465  Sum_probs=43.9

Q ss_pred             CCCccCCCEEEEeeC--ceEEecCCCcCCCcceeeecC------------CceEEE------------Eeeecccccch
Q 044334           60 TGDQIPADGLFLNGH--SLKVDECSMTGETDRWLWLRA------------RHFCWN------------EHCLGTRDEMG  112 (358)
Q Consensus        60 ~G~~IPaDg~vl~g~--~~~vDes~lTGEs~Pv~k~~~------------~~~~~~------------V~~~G~~T~~g  112 (358)
                      +||+|||||+|++++  ++.||||+|||||.|+.|.++            .+++|+            |++||.+|.+|
T Consensus        31 ~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G  109 (115)
T d1wpga1          31 VGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIG  109 (115)
T ss_dssp             TTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHH
T ss_pred             CCCEEeeceEEEEeeccceEEEEeecccceEEEEeecccccccccccccccceEEeccEEEeeeEEEEEEEEccccHHH
Confidence            999999999999752  478999999999999999742            223332            99999999987

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.02  E-value=3e-11  Score=113.66  Aligned_cols=72  Identities=18%  Similarity=0.196  Sum_probs=64.0

Q ss_pred             eeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCC---cceecCCCchHHHHh----cCCEEEeCCCcchHHHH
Q 044334          244 VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVAD---IGPWMGIEGTKWAKE----GSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Ad---vgia~~~~~~~~a~~----~adiil~~~~~~~i~~~  316 (358)
                      .+++.+|++|..+++.++..++.|+|+|||.||++|++.||   |||+||..+++..++    .||+++  +++..+..+
T Consensus       295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~i  372 (380)
T d1qyia_         295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGV  372 (380)
T ss_dssp             HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHH
T ss_pred             HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHH
Confidence            56789999999999999999999999999999999999999   999999777766554    899999  568888766


Q ss_pred             H
Q 044334          317 Q  317 (358)
Q Consensus       317 i  317 (358)
                      +
T Consensus       373 l  373 (380)
T d1qyia_         373 L  373 (380)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.58  E-value=3.6e-08  Score=82.14  Aligned_cols=96  Identities=11%  Similarity=0.044  Sum_probs=70.9

Q ss_pred             eeeecccccccchhhhhhccccceeeecCChhhHH--HHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHH
Q 044334          220 EVIEGVQFRNLSAEEGVAKIENIRVTARSSVPDKL--LTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWA  297 (358)
Q Consensus       220 ~~ltGd~~~~~~~~~~~~~~~~~~v~a~~~P~~K~--~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a  297 (358)
                      .++||+...  ........++...++....+..+.  .+.+.++-....|+++||+.||.|+|+.+++|++++ ++.+.+
T Consensus        52 ~iis~~~~~--~v~~~~~~l~~~~~~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~v  128 (177)
T d1k1ea_          52 AVLSGRDSP--ILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYV  128 (177)
T ss_dssp             EEEESCCCH--HHHHHHHHHTCCEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHH
T ss_pred             EEecCCchh--HHHHHHhhhcccccccccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHH
Confidence            578888755  344556666666666665543332  234444444578999999999999999999999999 999999


Q ss_pred             HhcCCEEEeCCCcch-HHHHHH
Q 044334          298 KEGSDIIIMDDNFTS-VVTDQR  318 (358)
Q Consensus       298 ~~~adiil~~~~~~~-i~~~i~  318 (358)
                      ++.||+|+..+.=.+ +.++++
T Consensus       129 k~~A~~Vt~~~GG~GavrE~~e  150 (177)
T d1k1ea_         129 KNAVDHVLSTHGGKGAFREMSD  150 (177)
T ss_dssp             HTTSSEECSSCTTTTHHHHHHH
T ss_pred             HHhCCEEeCCCCCCchHHHHHH
Confidence            999999998876444 555554

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.55  E-value=2.1e-08  Score=84.15  Aligned_cols=73  Identities=16%  Similarity=0.105  Sum_probs=60.0

Q ss_pred             eeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          244 VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ......+..+...++.++.....|+++|||.||.+||+.|++||||+ ...++.++++|++.. .+...+...+.
T Consensus       125 ~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~  197 (206)
T d1rkua_         125 GYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFL  197 (206)
T ss_dssp             EEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHH
T ss_pred             cccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHH
Confidence            34455666777788888888889999999999999999999999996 778888888899886 46777776554

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.49  E-value=2.2e-08  Score=85.59  Aligned_cols=68  Identities=24%  Similarity=0.130  Sum_probs=57.0

Q ss_pred             hhHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          251 PDKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       251 ~~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      ..|...++.+    .-....++++|||.||.+|++.|++||+|+ ++.+.+++.||+|+..++..++.++++.
T Consensus       151 ~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~  222 (230)
T d1wr8a_         151 INKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH  222 (230)
T ss_dssp             CCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred             cCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence            4566656554    333467999999999999999999999999 9999999999999998888888887764

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.41  E-value=6.6e-08  Score=83.10  Aligned_cols=67  Identities=22%  Similarity=0.141  Sum_probs=57.1

Q ss_pred             hhHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          251 PDKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       251 ~~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .+|...++.+.+    ....|+++|||.||.+|++.|++||+|+ ++.+.+++.||++...++..++.++++
T Consensus       150 ~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~  220 (225)
T d1l6ra_         150 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK  220 (225)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred             cchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence            467766665533    3356899999999999999999999999 899999999999999999889888876

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.21  E-value=1.2e-07  Score=79.37  Aligned_cols=65  Identities=18%  Similarity=0.057  Sum_probs=53.2

Q ss_pred             hhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHH
Q 044334          251 PDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       251 ~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .-...+.+.++.....+.++|||.||.+|++.|++||+|  ++.+..++.||+++..+|+..|.+.+
T Consensus       145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l  209 (210)
T d1j97a_         145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI  209 (210)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred             chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence            334445555555566799999999999999999999999  57888899999999888888887654

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.17  E-value=7.3e-07  Score=76.08  Aligned_cols=81  Identities=14%  Similarity=0.054  Sum_probs=62.3

Q ss_pred             eeecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHHHHHHH
Q 044334          244 VTARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRWGRCV  323 (358)
Q Consensus       244 v~a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~~r~~  323 (358)
                      ......|+.|..+++.++..++.|+|+||+.||.+|++.||++++++ ...+.+++..--...-++|+.|...++.-..+
T Consensus       141 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~  219 (226)
T d2feaa1         141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEIENVKEV  219 (226)
T ss_dssp             TCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHHHTSHHH
T ss_pred             ccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeeecCCHHHHHHHHHHHHHH
Confidence            34567889999999999999999999999999999999999999998 55555554433233346888888777654444


Q ss_pred             HH
Q 044334          324 NN  325 (358)
Q Consensus       324 ~~  325 (358)
                      ..
T Consensus       220 ~~  221 (226)
T d2feaa1         220 QE  221 (226)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=98.17  E-value=2.4e-07  Score=81.64  Aligned_cols=71  Identities=24%  Similarity=0.187  Sum_probs=59.8

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +++|.  .|...++.+.+.    ...|+++|||.||.+||+.+++|++|+ ++.+.+|+.||+++..++-.++.++++
T Consensus       183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~  259 (267)
T d1nf2a_         183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE  259 (267)
T ss_dssp             EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred             eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence            44554  588888776432    346889999999999999999999999 999999999999999888888888775

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=3.1e-07  Score=80.66  Aligned_cols=71  Identities=23%  Similarity=0.201  Sum_probs=60.4

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +.+|.  .|...++.|.+.    ...|+++|||.||.+||+.|+.|++|+ ++.+..|+.|++++..++-.++.+.++
T Consensus       183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~  259 (269)
T d1rlma_         183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ  259 (269)
T ss_dssp             EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred             EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence            44554  599888887543    246999999999999999999999999 999999999999998888888887775

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.14  E-value=3.7e-07  Score=80.74  Aligned_cols=71  Identities=21%  Similarity=0.170  Sum_probs=59.3

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +.+|.  .|..-++.+.+.    ...|+++|||.||.+||+.|+.|++|+ ++.+.+++.||++...++-.++.++++
T Consensus       206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~  282 (285)
T d1nrwa_         206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK  282 (285)
T ss_dssp             EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred             EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence            45554  687777776532    346999999999999999999999999 999999999999998877778887775

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.07  E-value=6.7e-07  Score=78.31  Aligned_cols=72  Identities=21%  Similarity=0.198  Sum_probs=60.0

Q ss_pred             ecCChh--hHHHHHHhhcC----CCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          246 ARSSVP--DKLLTVQSLKP----KGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       246 a~~~P~--~K~~iv~~l~~----~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .+..|.  .|...++.|.+    ....++++|||.||.+||+.|+.|++|+ ++.+.+|+.||+|...++-.++.++++
T Consensus       178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~  255 (260)
T d2rbka1         178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK  255 (260)
T ss_dssp             CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence            344453  58777777643    3457889999999999999999999999 999999999999998888888888875

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.05  E-value=8.8e-07  Score=77.84  Aligned_cols=66  Identities=20%  Similarity=0.115  Sum_probs=52.0

Q ss_pred             hHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCc-chHHHHHH
Q 044334          252 DKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNF-TSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~-~~i~~~i~  318 (358)
                      .|...++.+    +-....|+++|||.||.+||+.|+.|++|+ ++.+.+|+.||+++..++- ..+.++++
T Consensus       207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~  277 (283)
T d2b30a1         207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK  277 (283)
T ss_dssp             CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred             hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence            355555544    334568999999999999999999999999 9999999999999976544 34555554

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.02  E-value=9.7e-08  Score=91.71  Aligned_cols=115  Identities=18%  Similarity=0.185  Sum_probs=82.3

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeCCCccCCCEEEEeeCceEEecCCCcCCCcceeeecC
Q 044334           16 KEGWFDGDGVISAVLVVVIVSAVSNFKQSRQFQALANESSDIRVTGDQIPADGLFLNGHSLKVDECSMTGETDRWLWLRA   95 (358)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~V~G~~IPaDg~vl~g~~~~vDes~lTGEs~Pv~k~~~   95 (358)
                      ...|+|+++|+++++++..++.+||+|+++.+++++++.+ ....||++|+|.++.+           +||+.+....  
T Consensus        85 ~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~-~~~~~~~~P~d~~l~~-----------~g~~i~~~~~--  150 (472)
T d1wpga4          85 ITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEP-AATEQDKTPLQQKLDE-----------FGEQLSKVIS--  150 (472)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSC-CCCCCCCCHHHHHHHH-----------HHHHHHHHHH--
T ss_pred             chhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcc-ccccccCchHHHHHHH-----------HHHHHHHHHH--
Confidence            3479999999999999999999999999999999987752 2347999999987654           4555443221  


Q ss_pred             CceEEEEeeecccccch-hHHhhhcccccchHHHHHHHHHHHHHhhcCCchhHHH
Q 044334           96 RHFCWNEHCLGTRDEMG-NREFLGTNTKVDDVIYIIAAAVTIIVVAIPEGLPLAL  149 (358)
Q Consensus        96 ~~~~~~V~~~G~~T~~g-~~~~~~~~~~~~~~~~~~~~~~~~lv~a~P~~L~la~  149 (358)
                           .+..+|..|.+| .............+...+..++++++.++|+|||+++
T Consensus       151 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~v  200 (472)
T d1wpga4         151 -----LICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVI  200 (472)
T ss_dssp             -----HHHHHHHHHCCTTSSSCCSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhChhhHHHHH
Confidence                 134455555555 1111111111235677889999999999999999999

>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Calcium ATPase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.96  E-value=5.5e-06  Score=71.85  Aligned_cols=44  Identities=16%  Similarity=0.170  Sum_probs=38.1

Q ss_pred             HHHHHhhCceeeEeecCCCCceeEcCCccHHHHHHHHHHhcCCCC
Q 044334          150 LQEAVGLNTICNVYKSNSESTTEITGSPTEKAILSWAVFDLGMNR  194 (358)
Q Consensus       150 ~~~~~~l~~t~t~~~~~~~~~~~~~g~~~e~all~~a~~~~~~~~  194 (358)
                      ++.+.++|++++++.+.+++.+...|+|+|.||+.++. +.|.+.
T Consensus        53 ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~-k~g~~~   96 (239)
T d1wpga3          53 LATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE-KMNVFN   96 (239)
T ss_dssp             HHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHH-HHCTTC
T ss_pred             HHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHH-HhCCCh
Confidence            46788999999998876667899999999999999999 887654

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=1.7e-06  Score=75.70  Aligned_cols=71  Identities=18%  Similarity=0.099  Sum_probs=58.7

Q ss_pred             cCChh--hHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          247 RSSVP--DKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       247 ~~~P~--~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      +.+|.  +|...++.+.+.    ...++++|||.||.+||+.|+.|++|+ ++.+..++.|++++..++=.++.++++
T Consensus       190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~  266 (271)
T d1rkqa_         190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE  266 (271)
T ss_dssp             EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred             EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence            34454  588888777543    346899999999999999999999999 999999999999998777677877765

>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Sodium/potassium-transporting ATPase alpha chain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.78  E-value=5e-06  Score=70.88  Aligned_cols=44  Identities=18%  Similarity=0.148  Sum_probs=31.5

Q ss_pred             HHHHHhhCceeeEeecCCC---CceeEcCCccHHHHHHHHHHhcCCCC
Q 044334          150 LQEAVGLNTICNVYKSNSE---STTEITGSPTEKAILSWAVFDLGMNR  194 (358)
Q Consensus       150 ~~~~~~l~~t~t~~~~~~~---~~~~~~g~~~e~all~~a~~~~~~~~  194 (358)
                      +.++.++|+++++..+++.   ..+...|||+|.||+.++. +.+.+.
T Consensus        37 l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~-~~~~~~   83 (214)
T d1q3ia_          37 LSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE-LSCGSV   83 (214)
T ss_dssp             HHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH-HHHSCH
T ss_pred             HHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH-HhCCCH
Confidence            5788999999988765422   3456789999999999998 776654

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=8.5e-06  Score=69.36  Aligned_cols=59  Identities=25%  Similarity=0.156  Sum_probs=47.6

Q ss_pred             ChhhHHHHHHhhcCC--CcEEEEecCCCCCCcccccCCcceecCCC-chHHHHhcCCEEEeC
Q 044334          249 SVPDKLLTVQSLKPK--GYVVAVTGDGTNDAPAPKVADIGPWMGIE-GTKWAKEGSDIIIMD  307 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~--g~~v~~vGDG~ND~~al~~Advgia~~~~-~~~~a~~~adiil~~  307 (358)
                      .+..|.++++.++.+  -..+.++|||.||.+|++.|+.+++++.+ .....++.+|.++.+
T Consensus       150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~  211 (217)
T d1nnla_         150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD  211 (217)
T ss_dssp             STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred             ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence            457799999998753  24689999999999999999999999733 345667889998843

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.44  E-value=1.8e-05  Score=67.96  Aligned_cols=69  Identities=14%  Similarity=0.026  Sum_probs=53.8

Q ss_pred             ChhhHHHHHHhhcCC----CcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCC-------EEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPK----GYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD-------IIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~----g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~ad-------iil~~~~~~~i~~~i  317 (358)
                      ....|...++.+.+.    ...++++|||.||.+||+.++.|++|+ ++.+..++.||       ++...++..++.+++
T Consensus       159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l  237 (244)
T d1s2oa1         159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAI  237 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHH
T ss_pred             CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHH
Confidence            345688888777543    245889999999999999999999999 89998888887       555555666666665


Q ss_pred             H
Q 044334          318 R  318 (358)
Q Consensus       318 ~  318 (358)
                      +
T Consensus       238 ~  238 (244)
T d1s2oa1         238 A  238 (244)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.09  E-value=4.1e-05  Score=65.10  Aligned_cols=37  Identities=22%  Similarity=0.127  Sum_probs=31.6

Q ss_pred             cEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCC
Q 044334          265 YVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSD  302 (358)
Q Consensus       265 ~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~ad  302 (358)
                      ..++++|||.||.+||+.|+.|++|+ ++.+..++.+|
T Consensus       197 ~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~  233 (243)
T d1wzca1         197 IESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVS  233 (243)
T ss_dssp             EEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEES
T ss_pred             ccEEEEcCCHhHHHHHHcCCcEEEeC-CCChHHHhhhh
Confidence            47889999999999999999999999 88766655443

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00023  Score=59.76  Aligned_cols=52  Identities=17%  Similarity=0.142  Sum_probs=42.3

Q ss_pred             HHHHHHhhcC-CCcEEEEecC----CCCCCcccccCC-cceecCCCchHHHHhcCCEEE
Q 044334          253 KLLTVQSLKP-KGYVVAVTGD----GTNDAPAPKVAD-IGPWMGIEGTKWAKEGSDIII  305 (358)
Q Consensus       253 K~~iv~~l~~-~g~~v~~vGD----G~ND~~al~~Ad-vgia~~~~~~~~a~~~adiil  305 (358)
                      |...++.|.+ ....|+++||    |.||.+||+.|. .|++|+ ++.+..+..+|+++
T Consensus       186 Kg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~  243 (244)
T d2fuea1         186 KRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF  243 (244)
T ss_dssp             TTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence            5566666644 3557999999    569999999997 699999 99999998888765

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.23  E-value=0.00047  Score=57.41  Aligned_cols=61  Identities=15%  Similarity=0.205  Sum_probs=44.1

Q ss_pred             hHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcceecCCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          252 DKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIGPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       252 ~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advgia~~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      .|...++.|.++. .++++||+.||.+||+.++.|++|+ .|..  +..|++.+.+  ...+..+++
T Consensus       159 ~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l~  219 (229)
T d1u02a_         159 NKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKILK  219 (229)
T ss_dssp             CHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHHH
T ss_pred             CHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHHH
Confidence            4888888887664 5778999999999999997776664 3322  4678888854  444544443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.00071  Score=56.40  Aligned_cols=44  Identities=23%  Similarity=0.175  Sum_probs=32.1

Q ss_pred             cCChhhHHHHHHhh----cCCCcEEEEecCCCCCCcccccCCcceecC
Q 044334          247 RSSVPDKLLTVQSL----KPKGYVVAVTGDGTNDAPAPKVADIGPWMG  290 (358)
Q Consensus       247 ~~~P~~K~~iv~~l----~~~g~~v~~vGDG~ND~~al~~Advgia~~  290 (358)
                      ..+-..+.+.+..+    .-.-..++++|||.||.+||+.|++||+|.
T Consensus       182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~  229 (232)
T d1xvia_         182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK  229 (232)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred             CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEEe
Confidence            34445555544432    123446889999999999999999999997

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=91.72  E-value=0.015  Score=47.56  Aligned_cols=67  Identities=19%  Similarity=0.186  Sum_probs=46.0

Q ss_pred             ChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCC-chHHHHhcCCEEEeCCCcchHHHHH
Q 044334          249 SVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIE-GTKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       249 ~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~-~~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      .|+--..+.+.++-....++|+||..+|..+-+.|++   ++..|.. ..+.....+|+++  +++..+++++
T Consensus       153 ~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii  223 (224)
T d2hsza1         153 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT  223 (224)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred             cchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence            4565666777777777889999999999999888876   3333311 1234455688888  4577766543

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=90.66  E-value=0.055  Score=43.36  Aligned_cols=71  Identities=17%  Similarity=0.168  Sum_probs=52.5

Q ss_pred             ecCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCcc--eec--CCCchHHHHhcCCEEEeCCCcchHHHHHH
Q 044334          246 ARSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADIG--PWM--GIEGTKWAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       246 a~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Advg--ia~--~~~~~~~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ..-.|.--..+.+.++-.-..+.||||..+|..|=+.|+++  +..  |....+.....+|+++  +++..++++++
T Consensus       107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~~~ik  181 (182)
T d2gmwa1         107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK  181 (182)
T ss_dssp             STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred             cCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHHHHHhc
Confidence            35566667778888877767899999999999988899885  222  3222355566799998  56888888775

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.037  Score=45.49  Aligned_cols=31  Identities=19%  Similarity=0.124  Sum_probs=23.6

Q ss_pred             CcEEEEecC----CCCCCcccccCC-cceecCCCchH
Q 044334          264 GYVVAVTGD----GTNDAPAPKVAD-IGPWMGIEGTK  295 (358)
Q Consensus       264 g~~v~~vGD----G~ND~~al~~Ad-vgia~~~~~~~  295 (358)
                      ...++++||    |.||.+||+.|+ .|++++ +..+
T Consensus       198 ~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~  233 (243)
T d2amya1         198 YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APED  233 (243)
T ss_dssp             CSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHH
T ss_pred             cceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHH
Confidence            457999999    789999999997 688886 5433

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=89.70  E-value=0.09  Score=43.10  Aligned_cols=53  Identities=17%  Similarity=0.187  Sum_probs=39.1

Q ss_pred             CcEEEEecCCCCCCcccccCC---cceecCCCchH-HHHhcCCEEEeCCCcchHHHHHH
Q 044334          264 GYVVAVTGDGTNDAPAPKVAD---IGPWMGIEGTK-WAKEGSDIIIMDDNFTSVVTDQR  318 (358)
Q Consensus       264 g~~v~~vGDG~ND~~al~~Ad---vgia~~~~~~~-~a~~~adiil~~~~~~~i~~~i~  318 (358)
                      ...+.||||+.+|..+-+.|+   |+|+.|....+ ..+..+|+++  ++++.+.+++.
T Consensus       168 p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~  224 (228)
T d2hcfa1         168 PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA  224 (228)
T ss_dssp             GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred             hhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence            357999999999999999888   45555533333 3445689998  56888888775

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.30  E-value=0.1  Score=42.00  Aligned_cols=68  Identities=13%  Similarity=0.038  Sum_probs=45.6

Q ss_pred             cCChhhHHHHHHhhcCCCcEEEEecCCCCCCcccccCCc---ceecCCCc-hHHHHhcCCEEEeCCCcchHHHH
Q 044334          247 RSSVPDKLLTVQSLKPKGYVVAVTGDGTNDAPAPKVADI---GPWMGIEG-TKWAKEGSDIIIMDDNFTSVVTD  316 (358)
Q Consensus       247 ~~~P~~K~~iv~~l~~~g~~v~~vGDG~ND~~al~~Adv---gia~~~~~-~~~a~~~adiil~~~~~~~i~~~  316 (358)
                      ...|+-...+++.++-....++||||+.||..+-+.|++   ++..|... .+.....+|+++  +++..+...
T Consensus       137 ~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~  208 (210)
T d2ah5a1         137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY  208 (210)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred             cccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence            334555666667776666789999999999999999987   44444222 233334588987  447666554

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.23  E-value=0.15  Score=42.82  Aligned_cols=54  Identities=20%  Similarity=0.249  Sum_probs=44.9

Q ss_pred             EEEEecCCCCCCcccccCCc--ceecCCCchHHHHhcCCEEEeCCCcchHHHHHHH
Q 044334          266 VVAVTGDGTNDAPAPKVADI--GPWMGIEGTKWAKEGSDIIIMDDNFTSVVTDQRW  319 (358)
Q Consensus       266 ~v~~vGDG~ND~~al~~Adv--gia~~~~~~~~a~~~adiil~~~~~~~i~~~i~~  319 (358)
                      ..++|||++.|..+|+.+.=  |++++=+|.+=+...||+.+...+...+..++.+
T Consensus       201 ~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~VaiiS~~~~a~~~i~dl  256 (308)
T d1y8aa1         201 FPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADVVIISPTAMSEAKVIEL  256 (308)
T ss_dssp             SCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCSEEEECSSTHHHHHHHHH
T ss_pred             cceeccCccccHHHHHHHhcCCCeeEEecCccccccccceEEeccchhHHHHHHHH
Confidence            34789999999999998744  6666558999999999999999988888777764

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.73  E-value=0.93  Score=38.92  Aligned_cols=55  Identities=15%  Similarity=0.171  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCCCCCccccc---CCcceecCC--Cc----hHHHHhcCCEEEeCCCcchHHHHH
Q 044334          263 KGYVVAVTGDGTNDAPAPKV---ADIGPWMGI--EG----TKWAKEGSDIIIMDDNFTSVVTDQ  317 (358)
Q Consensus       263 ~g~~v~~vGDG~ND~~al~~---Advgia~~~--~~----~~~a~~~adiil~~~~~~~i~~~i  317 (358)
                      ....+.++|||.||..|.+.   ++..++.|-  ..    .+.-.++-|||+.+|.--.++..+
T Consensus       223 ~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~i  286 (291)
T d2bdua1         223 DNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI  286 (291)
T ss_dssp             TCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred             CcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHHH
Confidence            34578999999999999864   334333321  11    123347899999987766665443