Citrus Sinensis ID: 044362

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEGLTMMPVSSSAKKKGKRSVKNEGDQEQKQRSKQPVKDEKQA
Secondary Structure (PSIPRED)
cccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccEEccccEEEEEEcccccccccccccccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEcccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccEEEEEccccEEEEEEccccccccccEccccccHHHHcccccccccccc
Coil and Loop (DISEMBL)
kkkkakydgrthslphkkngpytcpkcnqAFAKSQIYAAHVssghykfetPEQRAERLAArypkrntlqpvdtsegltmmpvsssakkkgkrsvknegdqeqkqrskqpvkdekqa
Flexible Loop (DISEMBL)
kkkkakydgrthslphkkngpytCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLaarypkrntlqpvdtsegltmmpvsssakkkgkrsvknegdqeqkqrskqpvkdekqa
Low Complexity Region (SEG)
KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEGLTMMPVSSSAKKKGKRSVKNEGDQEQKQRSKQPVKDEKQA
Disordered region (IsUnstruct)
*********************YTCPKCNQAFAKSQIYAAHVSSGHY**********************************************************************
Disordered Region (DISOPRED)
******Y*GRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHV****************************PVDTSEGLTM*************************************
Disordered Region (DISEMBL)
**********THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEGLTMMP***********************************
Disordered Region (DISPRO)
*****KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEGLTMMPVSSS*******************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEGLTMMPVSSSAKKKGKRSVKNEGDQEQKQRSKQPVKDEKQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
255647072	325	unknown [Glycine max]	0.646	0.230	0.605	7e-18
356536552	325	PREDICTED: uncharacterized protein LOC10	0.646	0.230	0.605	7e-18
255574424	475	hypothetical protein RCOM_0146500 [Ricin	0.818	0.2	0.505	1e-17
297812445	340	zinc finger family protein [Arabidopsis	0.551	0.188	0.625	2e-15
15237189	324	C2H2-like zinc finger protein [Arabidops	0.543	0.194	0.603	3e-14
116830465	302	unknown [Arabidopsis thaliana]	0.517	0.198	0.639	5e-14
91805447	301	zinc finger family protein [Arabidopsis	0.517	0.199	0.639	5e-14
357462875	256	C2H2-type zinc finger protein-like prote	0.767	0.347	0.472	6e-14
15224184	251	C2H2-like zinc finger protein [Arabidops	0.517	0.239	0.639	6e-14
297836188	330	zinc finger family protein [Arabidopsis	0.517	0.181	0.622	2e-13

>gi|255647072|gb|ACU24004.1| unknown [Glycine max]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)

Query: 6   KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKR 65
           KYDGR HS P+KKNGPYTCPKC   F  SQ +AAHVSS HYK+ET  +R +RL A+  KR
Sbjct: 186 KYDGRMHSYPYKKNGPYTCPKCGHVFETSQRFAAHVSSSHYKYETKSERKKRLMAKIRKR 245

Query: 66  NTLQPVDTSEGLTMMP 81
           N L+    S GLT++P
Sbjct: 246 N-LRIEWVSGGLTVVP 260

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536552|ref|XP_003536801.1| PREDICTED: uncharacterized protein LOC100788426 [Glycine max]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)

Query: 6   KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKR 65
           KYDGR HS P+KKNGPYTCPKC   F  SQ +AAHVSS HYK+ET  +R +RL A+  KR
Sbjct: 186 KYDGRMHSYPYKKNGPYTCPKCGHVFETSQRFAAHVSSSHYKYETKSERKKRLMAKIRKR 245

Query: 66  NTLQPVDTSEGLTMMP 81
           N L+    S GLT++P
Sbjct: 246 N-LRIEWVSGGLTVVP 260

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574424|ref|XP_002528125.1| hypothetical protein RCOM_0146500 [Ricinus communis] gi|223532464|gb|EEF34255.1| hypothetical protein RCOM_0146500 [Ricinus communis]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 2/97 (2%)

Query: 8   DGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNT 67
           DGRTHSLPH+K GPYTCPKC   F+ SQ +AAH+ + HYK E+ +QR +RLAA+Y KR  
Sbjct: 298 DGRTHSLPHEKYGPYTCPKCRNVFSVSQTFAAHMLT-HYKNESSDQRKKRLAAKY-KRKN 355

Query: 68  LQPVDTSEGLTMMPVSSSAKKKGKRSVKNEGDQEQKQ 104
           L+ V    G+T++P SS A+ K    V N   + + Q
Sbjct: 356 LRLVYRRGGMTLLPESSKARGKSVNMVDNSNVRNEVQ 392

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812445|ref|XP_002874106.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297319943|gb|EFH50365.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 49/64 (76%)

Query: 2   KKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAAR 61
           K+  +YDGRTHSLP+KK GPYTCPKCN+ F  SQ +AAH+SS HYK ET E++ +R  AR
Sbjct: 222 KENGEYDGRTHSLPYKKYGPYTCPKCNRVFDTSQKFAAHISSMHYKNETIEEKFKRYNAR 281

Query: 62  YPKR 65
             KR
Sbjct: 282 NKKR 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237189|ref|NP_197690.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|10177246|dbj|BAB10620.1| C2H2-type zinc finger protein-like [Arabidopsis thaliana] gi|332005722|gb|AED93105.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query: 3   KKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARY 62
           K  +YDGRTHSLP++K GPYTCPKCN  F  SQ +AAH+SS HYK E+ E++ +R  AR 
Sbjct: 227 KDIEYDGRTHSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYKNESIEEKFKRYNARN 286

Query: 63  PKR 65
            KR
Sbjct: 287 KKR 289

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830465|gb|ABK28190.1| unknown [Arabidopsis thaliana]

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 1   KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAA 60
           K   A+YDGR HSLP+KK GPYTCPKCN  F  SQ +AAH+SS HYK ET ++RA+R  A
Sbjct: 198 KSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSS-HYKSETNKERAQRFRA 256

Query: 61  R 61
           R
Sbjct: 257 R 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|91805447|gb|ABE65452.1| zinc finger family protein [Arabidopsis thaliana]

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 1   KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAA 60
           K   A+YDGR HSLP+KK GPYTCPKCN  F  SQ +AAH+SS HYK ET ++RA+R  A
Sbjct: 198 KSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSS-HYKSETNKERAQRFRA 256

Query: 61  R 61
           R
Sbjct: 257 R 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462875|ref|XP_003601719.1| C2H2-type zinc finger protein-like protein [Medicago truncatula] gi|355490767|gb|AES71970.1| C2H2-type zinc finger protein-like protein [Medicago truncatula]

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 2/91 (2%)

Query: 8   DGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNT 67
           DG+ HSLPH+K+GPY C +CN+ F  SQ +A HVSS HYKFE+ E R +R  +R  KR  
Sbjct: 144 DGKIHSLPHEKHGPYPCSQCNKIFETSQKFANHVSSSHYKFESEEDRKKRYNSRIRKRPR 203

Query: 68  LQPVDTSEG-LTMMPVSSSAKKKGKRSVKNE 97
           LQ    ++G  T +PV + A  K   S+ N+
Sbjct: 204 LQIQKLNDGRTTFVPVVACA-DKSHASINND 233

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224184|ref|NP_179439.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|4218009|gb|AAD12217.1| putative C2H2-type zinc finger protein [Arabidopsis thaliana] gi|225898116|dbj|BAH30390.1| hypothetical protein [Arabidopsis thaliana] gi|330251680|gb|AEC06774.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 1   KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAA 60
           K   A+YDGR HSLP+KK GPYTCPKCN  F  SQ +AAH+SS HYK ET ++RA+R  A
Sbjct: 148 KSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSS-HYKSETNKERAQRFRA 206

Query: 61  R 61
           R
Sbjct: 207 R 207

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836188|ref|XP_002885976.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297331816|gb|EFH62235.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 1/61 (1%)

Query: 1   KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAA 60
           K    +YDGRTHSLP++K GPYTCPKCN  F  SQ +AAH+SS HYK ET E+R  RL A
Sbjct: 224 KSNDDQYDGRTHSLPYEKYGPYTCPKCNGVFDTSQKFAAHMSS-HYKNETSEEREHRLRA 282

Query: 61  R 61
           +
Sbjct: 283 K 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
TAIR|locus:2046318	251	AT2G18490 "AT2G18490" [Arabido	0.810	0.374	0.475	4.1e-17
TAIR|locus:2172716	324	AT5G22990 "AT5G22990" [Arabido	0.543	0.194	0.603	1.9e-16
TAIR|locus:2053598	329	AT2G15740 "AT2G15740" [Arabido	0.491	0.173	0.603	1.2e-14
TAIR|locus:2163857	300	AT5G42640 "AT5G42640" [Arabido	0.508	0.196	0.583	3.5e-14
ZFIN|ZDB-GENE-030131-9559	2620	znf292b "zinc finger protein 2	0.784	0.034	0.298	0.00085

TAIR|locus:2046318 AT2G18490 "AT2G18490" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 49/103 (47%), Positives = 61/103 (59%)

Query:     1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAA 60
             K   A+YDGR HSLP+KK GPYTCPKCN  F  SQ +AAH+SS HYK ET ++RA+R  A
Sbjct:   148 KSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSS-HYKSETNKERAQRFRA 206

Query:    61 RYPKRNTLQPVDTSEGLTMMPVSSSAKKKGKRSVKNEGDQEQK 103
             R  KR   +       L +     S K K +  V N+G  + K
Sbjct:   207 RN-KRKYRK-------LNLEVYGESQKIKQEDGVHNDGRSDDK 241

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2172716 AT5G22990 "AT5G22990" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query:     3 KKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARY 62
             K  +YDGRTHSLP++K GPYTCPKCN  F  SQ +AAH+SS HYK E+ E++ +R  AR 
Sbjct:   227 KDIEYDGRTHSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYKNESIEEKFKRYNARN 286

Query:    63 PKR 65
              KR
Sbjct:   287 KKR 289

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2053598 AT2G15740 "AT2G15740" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 35/58 (60%), Positives = 45/58 (77%)

Query:     8 DGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKR 65
             DGRTHSLP++K GPYTCPKCN  F  SQ +AAH+SS HYK ET E+R +R+ A+  ++
Sbjct:   230 DGRTHSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSS-HYKNETSEEREQRIRAKNKRK 286

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2163857 AT5G42640 "AT5G42640" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 35/60 (58%), Positives = 43/60 (71%)

Query:     6 KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKR 65
             +YDGRTHSLP+ K GPYTCP+CN  F  SQ +AAH+ S HY  ET ++R +R  AR  KR
Sbjct:   227 QYDGRTHSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLS-HYNNETDKERDQRFRARNKKR 285

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

ZFIN|ZDB-GENE-030131-9559 znf292b "zinc finger protein 292b" [Danio rerio (taxid:7955)]

 Score = 102 (41.0 bits), Expect = 0.00085, P = 0.00085
 Identities = 29/97 (29%), Positives = 41/97 (42%)

Query:    12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPV 71
             H++ H K+G Y CP C + F   +    HV+S H K    E    RLAA    +    P 
Sbjct:   550 HAVTHFKDGSYFCPICLETFETKETLEPHVAS-HVKLSCKE----RLAAMKTSKQLASPK 604

Query:    72 DTSEGLTMMPVSSSAKKKGKRSVKNE-GDQEQKQRSK 107
               +  +  +   SS  +  K   K+  G Q  K  SK
Sbjct:   605 TATPDIPSLKAKSSENQVRKPKTKSSSGGQANKLSSK 641


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.122   0.345    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      116       116   0.00091  102 3  11 23  0.43    31
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  116 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.71u 0.14s 18.85t   Elapsed:  00:00:01
  Total cpu time:  18.71u 0.14s 18.85t   Elapsed:  00:00:01
  Start:  Thu May  9 14:12:55 2013   End:  Thu May  9 14:12:56 2013

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_602360.1 annotation not avaliable (340 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	116
PRK12862	763	PRK12862, PRK12862, malic enzyme; Reviewed	4e-04

>gnl|CDD|183799 PRK12862, PRK12862, malic enzyme; Reviewed

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 76  GLTMMPVSSSAKKKGKRSVKNEGDQEQKQRSKQPVKDEKQA 116
           GL M PV ++AK   KR V  EG+ E+  R+ Q V DE  A
Sbjct: 433 GLIMKPVFAAAKAAPKRVVFAEGEDERVLRAAQVVVDEGLA 473

Length = 763

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.26
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.94
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.78
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.65
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.62
KOG3576	267	consensus Ovo and related transcription factors [T	98.58
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.54
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.4
KOG3576	267	consensus Ovo and related transcription factors [T	98.12
PHA02768	55	hypothetical protein; Provisional	98.04
PHA00616	44	hypothetical protein	97.9
PHA02768	55	hypothetical protein; Provisional	97.76
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.63
KOG3608	467	consensus Zn finger proteins [General function pre	97.54
PHA00733	128	hypothetical protein	97.49
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.37
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.34
PHA00733	128	hypothetical protein	97.16
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.75
smart00355	26	ZnF_C2H2 zinc finger.	96.69
KOG3608	467	consensus Zn finger proteins [General function pre	96.37
PHA00732	79	hypothetical protein	96.08
PHA00732	79	hypothetical protein	96.04
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.57
KOG3993	500	consensus Transcription factor (contains Zn finger	95.49
PHA00616	44	hypothetical protein	95.22
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.61
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.26
COG5048	467	FOG: Zn-finger [General function prediction only]	93.21
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.07
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.99
PLN03086	567	PRLI-interacting factor K; Provisional	92.94
COG5189	423	SFP1 Putative transcriptional repressor regulating	92.89
PLN03086	567	PRLI-interacting factor K; Provisional	92.71
KOG3993	500	consensus Transcription factor (contains Zn finger	92.21
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	91.35
COG5189	423	SFP1 Putative transcriptional repressor regulating	90.96
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.98
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.92
COG4049	65	Uncharacterized protein containing archaeal-type C	87.21

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.26  E-value=1.5e-12  Score=94.68  Aligned_cols=50  Identities=26%  Similarity=0.495  Sum_probs=44.3

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      |.|.-.=-|..|+|+|||||||.|+.|+++|...+||+.|+.+ |.+.+.+
T Consensus       195 KaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQT-HS~~K~~  244 (279)
T KOG2462|consen  195 KAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQT-HSDVKKH  244 (279)
T ss_pred             ccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHh-hcCCccc
Confidence            4555555689999999999999999999999999999999999 9998754

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.94  E-value=2e-10  Score=55.82  Aligned_cols=26  Identities=35%  Similarity=0.839  Sum_probs=23.9

Q ss_pred             hhhhhccccCCCcceeccccchhccC
Q 044362            8 DGRTHSLPHKKNGPYTCPKCNQAFAK   33 (116)
Q Consensus         8 ~L~~H~r~Htgekp~~C~~C~k~F~~   33 (116)
                      +|..|+++|+|++||.|+.|++.|..
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999863

...

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.78  E-value=2.2e-09  Score=87.71  Aligned_cols=71  Identities=17%  Similarity=0.276  Sum_probs=54.4

Q ss_pred             cCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhh---cCCCCCCCceecCCCc
Q 044362            3 KKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAAR---YPKRNTLQPVDTSEGL   77 (116)
Q Consensus         3 ~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   77 (116)
                      -.+.+.|.-|.|+||||+||+|.+||++|..+.+|+.|+-+ |.......   -.+.|.   ++.+.+...+.+..++
T Consensus       615 lSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v-Hka~p~~R---~q~ScP~~~ic~~kftn~V~lpQhI  688 (958)
T KOG1074|consen  615 LSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV-HKAKPPAR---VQFSCPSTFICQKKFTNAVTLPQHI  688 (958)
T ss_pred             ccchhhhhhhhhcccCcCccccccccchhccccchhhcccc-cccCcccc---ccccCCchhhhcccccccccccceE
Confidence            45678999999999999999999999999999999999998 76544332   234455   6666666655554444

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.65  E-value=7.8e-09  Score=84.61  Aligned_cols=51  Identities=22%  Similarity=0.394  Sum_probs=47.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPE   52 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~   52 (116)
                      +.|...+.|..|+++|+|+|||.|.+|++.|....+|+.||.+ |+|..++.
T Consensus       887 k~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgt-H~w~q~~s  937 (958)
T KOG1074|consen  887 KQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGT-HMWVQPPS  937 (958)
T ss_pred             hcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhcc-ccccCCCc
Confidence            4688899999999999999999999999999999999999999 99988773

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.62  E-value=7.5e-09  Score=75.56  Aligned_cols=43  Identities=26%  Similarity=0.437  Sum_probs=41.4

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |+|.+.++|+.|+.+|++.|+|.|..|+|+|+..+.|.+|...
T Consensus       223 kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  223 KAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             chhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            6899999999999999999999999999999999999999875

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.58  E-value=2.2e-08  Score=70.76  Aligned_cols=51  Identities=24%  Similarity=0.404  Sum_probs=43.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      |-|.+-.+|.+|+|+|||.+||.|..|+++|.+...|..|++.+|.....+
T Consensus       153 kgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~y  203 (267)
T KOG3576|consen  153 KGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQY  203 (267)
T ss_pred             CcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHH
Confidence            457888899999999999999999999999999999999988536554433

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.54  E-value=1.8e-08  Score=81.78  Aligned_cols=43  Identities=35%  Similarity=0.618  Sum_probs=40.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |+|+.+-.|+.|+|+|.|||||+|+.|+++|+.++.+..||-.
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            6899999999999999999999999999999999999998864

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.40  E-value=6.4e-08  Score=78.63  Aligned_cols=52  Identities=21%  Similarity=0.316  Sum_probs=44.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhH
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQ   53 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~   53 (116)
                      |.|...++|.+|..-|+|.+||.|.+|.++|..+.+|..|+|. |.|.+++.+
T Consensus       902 K~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRL-HSGEKPfQC  953 (1007)
T KOG3623|consen  902 KAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRL-HSGEKPFQC  953 (1007)
T ss_pred             HHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhh-ccCCCcchh
Confidence            4577778899999899999999999999999999999999999 998877654

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.12  E-value=9.9e-08  Score=67.46  Aligned_cols=65  Identities=15%  Similarity=0.105  Sum_probs=52.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      |.|.-.-.|.+|+..|...+.|.|..||+.|.....|++|+++ |+|..++       +|..|.+.+.+...+
T Consensus       125 K~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rt-htgvrpy-------kc~~c~kaftqrcsl  189 (267)
T KOG3576|consen  125 KKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRT-HTGVRPY-------KCSLCEKAFTQRCSL  189 (267)
T ss_pred             hhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcc-ccCcccc-------chhhhhHHHHhhccH
Confidence            4566667789999999999999999999999999999999999 9999875       444444444444333

>PHA02768 hypothetical protein; Provisional

Probab=98.04  E-value=1.1e-06  Score=49.78  Aligned_cols=25  Identities=28%  Similarity=0.731  Sum_probs=22.3

Q ss_pred             ceeccccchhccCchhhHHHhHhccC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      -|.|+.||+.|...++|..|+++ |+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~-H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRK-HN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHh-cC
Confidence            37899999999999999999999 77

>PHA00616 hypothetical protein

Probab=97.90  E-value=4.7e-06  Score=45.11  Aligned_cols=29  Identities=28%  Similarity=0.453  Sum_probs=26.3

Q ss_pred             ceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      ||.|+.||+.|.....|..|++. |+|.+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~-~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLS-VHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHH-hcCCCc
Confidence            79999999999999999999999 887644

>PHA02768 hypothetical protein; Provisional

Probab=97.76  E-value=1.3e-05  Score=45.49  Aligned_cols=36  Identities=14%  Similarity=0.135  Sum_probs=32.3

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhH
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYA   38 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~   38 (116)
                      |.|...++|..|+++|+  +||.|..|++.|...+.|.
T Consensus        13 K~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768         13 EIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             CeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            56889999999999999  7999999999999887764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.63  E-value=2.3e-05  Score=36.30  Aligned_cols=22  Identities=27%  Similarity=0.777  Sum_probs=20.8

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            7899999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.54  E-value=5.3e-05  Score=57.65  Aligned_cols=42  Identities=24%  Similarity=0.450  Sum_probs=39.8

Q ss_pred             CcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHh
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .+++++.|+.|+++|+++|-..|+.||..|++...|..|.+.
T Consensus       188 ~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rR  229 (467)
T KOG3608|consen  188 HMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRR  229 (467)
T ss_pred             hhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHh
Confidence            578999999999999999999999999999999999999885

>PHA00733 hypothetical protein

Probab=97.49  E-value=7.4e-05  Score=49.45  Aligned_cols=52  Identities=15%  Similarity=0.172  Sum_probs=37.3

Q ss_pred             hhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362            7 YDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus         7 s~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      +.|..|+.++ +.+||.|+.|++.|.....|..|+++ |..   +      +.|..+.+.+..
T Consensus        60 ~~l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~-h~~---~------~~C~~CgK~F~~  111 (128)
T PHA00733         60 SYLYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRY-TEH---S------KVCPVCGKEFRN  111 (128)
T ss_pred             HHHHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhc-CCc---C------ccCCCCCCccCC
Confidence            3455665544 48899999999999999999999987 532   1      556666555543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.37  E-value=9.4e-05  Score=35.54  Aligned_cols=25  Identities=28%  Similarity=0.737  Sum_probs=23.0

Q ss_pred             ceeccccchhccCchhhHHHhHhccC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      ||.|..|++.|.....|..|++. |.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~-h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRS-HC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCT-TT
T ss_pred             CCCCCccCCccCChhHHHHHhHH-hc
Confidence            69999999999999999999988 53

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.34  E-value=0.00012  Score=33.66  Aligned_cols=22  Identities=23%  Similarity=0.739  Sum_probs=18.9

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |.|+.|+..|.....|..|+..
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            7899999999999999999987

...

>PHA00733 hypothetical protein

Probab=97.16  E-value=0.00039  Score=46.00  Aligned_cols=44  Identities=16%  Similarity=0.260  Sum_probs=37.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|.....|..|+++|  +.+|.|..|++.|.....|..|+.. ..+
T Consensus        81 k~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~-~h~  124 (128)
T PHA00733         81 MPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCK-KHN  124 (128)
T ss_pred             CcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHH-hcC
Confidence            4678888999999877  3579999999999999999999886 443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.75  E-value=0.0015  Score=36.36  Aligned_cols=31  Identities=23%  Similarity=0.441  Sum_probs=22.3

Q ss_pred             cCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362           16 HKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        16 Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +..+.|-.|++|+..+++..+|.+|+.+ +.+
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~-~H~   49 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEI-RHF   49 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHH-HTT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHH-Hhc
Confidence            4567899999999999999999999987 544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.69  E-value=0.001  Score=30.71  Aligned_cols=24  Identities=29%  Similarity=0.863  Sum_probs=21.5

Q ss_pred             eeccccchhccCchhhHHHhHhccC
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |.|..|++.|.....|..|++. |.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~-H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT-HX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH-hc
Confidence            5799999999999999999987 54

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=96.37  E-value=0.0021  Score=49.22  Aligned_cols=42  Identities=26%  Similarity=0.460  Sum_probs=33.0

Q ss_pred             CCchhhhhhccc-cCCCcceeccccchhccCchhhHHHhHhccC
Q 044362            4 KAKYDGRTHSLP-HKKNGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus         4 ~~ks~L~~H~r~-Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      ...+.|.+|++. |+.+|||+|+.|.+.|.+.+.|.+|..+ |.
T Consensus       274 ~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~-HS  316 (467)
T KOG3608|consen  274 SSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV-HS  316 (467)
T ss_pred             CChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh-cc
Confidence            345678888765 7778888888888888888888888877 65

>PHA00732 hypothetical protein

Probab=96.08  E-value=0.0034  Score=38.19  Aligned_cols=22  Identities=18%  Similarity=0.418  Sum_probs=11.6

Q ss_pred             ceeccccchhccCchhhHHHhH
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVS   42 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~   42 (116)
                      ||.|..|++.|.....|..|++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r   22 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHAR   22 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhh
Confidence            3455555555555555555554

>PHA00732 hypothetical protein

Probab=96.04  E-value=0.0034  Score=38.17  Aligned_cols=37  Identities=22%  Similarity=0.418  Sum_probs=29.7

Q ss_pred             CCcCCchhhhhhcc-ccCCCcceeccccchhccCchhhHHHhHh
Q 044362            1 KKKKAKYDGRTHSL-PHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      +.|...+.|..|++ .|++   +.|+.|++.|.   .+..|..+
T Consensus         9 k~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          9 FTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            46888999999998 4764   58999999998   47777765

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.57  E-value=0.0056  Score=28.56  Aligned_cols=22  Identities=27%  Similarity=0.699  Sum_probs=20.4

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |.|..|+..|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6899999999999999999875

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=95.49  E-value=0.0068  Score=47.29  Aligned_cols=48  Identities=19%  Similarity=0.305  Sum_probs=38.4

Q ss_pred             CCcCCchhhhhhccccC--------CCc-------------------------ceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHK--------KNG-------------------------PYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Ht--------gek-------------------------p~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |.|.+--+|..|.|+|-        |..                         -|.|..|++.|.+...|+.|+.+ |..
T Consensus       303 KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlt-hq~  381 (500)
T KOG3993|consen  303 KVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLT-HQR  381 (500)
T ss_pred             ccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHh-hhc
Confidence            57888888888888882        222                         38999999999999999999998 544


Q ss_pred             CC
Q 044362           48 FE   49 (116)
Q Consensus        48 ~~   49 (116)
                      ..
T Consensus       382 ~~  383 (500)
T KOG3993|consen  382 AP  383 (500)
T ss_pred             cc
Confidence            33

>PHA00616 hypothetical protein

Probab=95.22  E-value=0.0036  Score=33.85  Aligned_cols=26  Identities=19%  Similarity=0.038  Sum_probs=23.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|..++.|..|++.|+|++|+.|+.
T Consensus         9 ~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          9 GIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             HHHhhHHHHHHHHHHhcCCCccceeE
Confidence            45888999999999999999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.61  E-value=0.01  Score=28.35  Aligned_cols=22  Identities=23%  Similarity=0.653  Sum_probs=20.0

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |-|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999998875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.26  E-value=0.05  Score=27.20  Aligned_cols=23  Identities=26%  Similarity=0.566  Sum_probs=20.5

Q ss_pred             ceeccccchhccCchhhHHHhHh
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      +|.|..|+..|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            68899999999999999888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.21  E-value=0.045  Score=41.06  Aligned_cols=49  Identities=18%  Similarity=0.406  Sum_probs=43.2

Q ss_pred             CcCCchhhhhhcc--ccCCC--cceecc--ccchhccCchhhHHHhHhccCCCCCh
Q 044362            2 KKKAKYDGRTHSL--PHKKN--GPYTCP--KCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         2 ~~~~ks~L~~H~r--~Htge--kp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      .|.....|..|.+  .|+++  +|+.|+  .|++.|.+...+..|... |++....
T Consensus       298 ~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~  352 (467)
T COG5048         298 SFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILL-HTSISPA  352 (467)
T ss_pred             CccccccccccccccccccccCCceeeeccCCCccccccccccCCccc-ccCCCcc
Confidence            4677788999999  89999  999999  799999999999999999 8876643

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.07  E-value=0.054  Score=25.59  Aligned_cols=21  Identities=24%  Similarity=0.599  Sum_probs=17.2

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ..|+.||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4699999999 66788888765

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.99  E-value=0.046  Score=25.16  Aligned_cols=21  Identities=24%  Similarity=0.675  Sum_probs=16.5

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |.|+.|+-... ...|..|++.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            78999998777 8899999887

>PLN03086 PRLI-interacting factor K; Provisional

Probab=92.94  E-value=0.068  Score=43.44  Aligned_cols=50  Identities=16%  Similarity=0.349  Sum_probs=30.5

Q ss_pred             chhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCC
Q 044362            6 KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNT   67 (116)
Q Consensus         6 ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~   67 (116)
                      ...|..|+.+|+  +|+.|+ |+..| ....|..|+.+ |.....       +.|.+|....
T Consensus       465 ~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~t-hCp~Kp-------i~C~fC~~~v  514 (567)
T PLN03086        465 QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAS-TCPLRL-------ITCRFCGDMV  514 (567)
T ss_pred             hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhc-cCCCCc-------eeCCCCCCcc
Confidence            345777777664  677777 77544 45677777766 555432       5566665443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=92.89  E-value=0.039  Score=41.85  Aligned_cols=51  Identities=18%  Similarity=0.378  Sum_probs=34.8

Q ss_pred             CCcceeccc--cchhccCchhhHHHhHhccCCC-----------CChhHHHHHHHhhcCCCCCC
Q 044362           18 KNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKF-----------ETPEQRAERLAARYPKRNTL   68 (116)
Q Consensus        18 gekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~-----------~~~~~~~~~~~~~~~~~~~~   68 (116)
                      ++|||+|++  |.+.+....-|+.|+.-+|-.-           ..+....+.|.|.+|-+...
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYK  409 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYK  409 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhc
Confidence            359999988  9999999999999998645110           01112235677777755444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=92.71  E-value=0.083  Score=42.96  Aligned_cols=39  Identities=18%  Similarity=0.107  Sum_probs=32.9

Q ss_pred             CchhhhhhccccCCCcceeccccchhccC----------chhhHHHhHh
Q 044362            5 AKYDGRTHSLPHKKNGPYTCPKCNQAFAK----------SQIYAAHVSS   43 (116)
Q Consensus         5 ~ks~L~~H~r~Htgekp~~C~~C~k~F~~----------~~~l~~H~~~   43 (116)
                      ....|..|+.+|.+++|+.|..|+..|..          ...|..|...
T Consensus       488 ~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~  536 (567)
T PLN03086        488 EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI  536 (567)
T ss_pred             chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh
Confidence            45678999999999999999999998852          3478899887

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=92.21  E-value=0.061  Score=42.18  Aligned_cols=43  Identities=23%  Similarity=0.451  Sum_probs=31.8

Q ss_pred             cCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccC
Q 044362            3 KKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus         3 ~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |.+-..|..|.-.-.--.-|.|+.|+|.|+-..||..|.|. |.
T Consensus       277 YeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRW-HK  319 (500)
T KOG3993|consen  277 YEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRW-HK  319 (500)
T ss_pred             hhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcc-cC
Confidence            44555677775322222348999999999999999999998 63

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=91.35  E-value=0.18  Score=28.10  Aligned_cols=36  Identities=19%  Similarity=0.372  Sum_probs=20.4

Q ss_pred             chhhhhhcc-ccCCC-cceeccccchhccCchhhHHHhHh
Q 044362            6 KYDGRTHSL-PHKKN-GPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         6 ks~L~~H~r-~Htge-kp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ...|..|.. .|.++ +.+.|++|...+.  .+|..|+..
T Consensus        14 ~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen   14 ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            345666643 34443 4567777766433  366666665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=90.96  E-value=0.093  Score=39.88  Aligned_cols=24  Identities=21%  Similarity=0.574  Sum_probs=21.7

Q ss_pred             CcceeccccchhccCchhhHHHhH
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVS   42 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~   42 (116)
                      .|||.|++|++.+....-|+.|+.
T Consensus       396 ~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         396 DKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CCceeccccchhhccCccceeccc
Confidence            489999999999999999988875

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.98  E-value=0.23  Score=27.64  Aligned_cols=37  Identities=16%  Similarity=0.352  Sum_probs=25.8

Q ss_pred             ceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPK   64 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~   64 (116)
                      -|.|++|++. .....|..|....|......      +.|.++.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~------v~CPiC~   38 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKN------VVCPICS   38 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCC------ccCCCch
Confidence            3889999994 55678999987636654433      5666664

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.92  E-value=0.32  Score=29.50  Aligned_cols=23  Identities=30%  Similarity=0.816  Sum_probs=20.9

Q ss_pred             ceeccccchhccCchhhHHHhHh
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .+.|..|+..|.....|..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            69999999999999999999996

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.21  E-value=0.34  Score=27.53  Aligned_cols=31  Identities=23%  Similarity=0.521  Sum_probs=26.4

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHh
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      +++--||.-+.|+.|+..|...-...+|..-
T Consensus         9 v~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049           9 VRDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eeccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            3456788889999999999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.47
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.25
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.2
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.15
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.13
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.08
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.02
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.02
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.01
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.98
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.98
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.97
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.97
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.94
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.92
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.91
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.9
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.89
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.88
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.88
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.87
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.87
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.86
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.86
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.85
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.83
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.8
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.79
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.78
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.78
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.77
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.77
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.77
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.76
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.76
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.75
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.73
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.73
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.71
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.68
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.68
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.66
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.66
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.65
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.63
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.62
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.62
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.61
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.6
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.6
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.59
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.59
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.58
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.58
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.58
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.57
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.56
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.56
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.52
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.51
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.48
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.46
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.45
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.44
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.43
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.36
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.35
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.34
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.32
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.3
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.3
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.29
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.29
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.6
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.25
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.25
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.24
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.23
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.54
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.21
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.13
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.13
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.1
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.08
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.03
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.03
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.03
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.03
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.03
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.03
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.02
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.01
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.01
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.0
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.99
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.98
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.97
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	97.97
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.97
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.97
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.97
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.96
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.96
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.95
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.95
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.95
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.94
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.93
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.93
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.93
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.92
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.92
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.92
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.92
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.91
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	97.9
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	97.89
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.87
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.8
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.77
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.76
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	97.71
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.7
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.69
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.69
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.68
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.68
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.68
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.67
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.66
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.65
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.65
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.64
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.63
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	97.63
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.62
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.61
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.59
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.59
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.59
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.58
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.58
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.58
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.58
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.57
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.56
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.55
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.55
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.54
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.53
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.52
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.52
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.51
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.5
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.5
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.48
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.46
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.46
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.45
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.45
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.43
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.43
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.41
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.39
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.33
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.31
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.31
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.24
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.17
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.13
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.07
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.04
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.03
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.01
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	96.94
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.88
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.53
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	96.24
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	95.93
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	95.81
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	95.54
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.38
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	95.33
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	94.98
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.93
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	94.89
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	93.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	94.65
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.56
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	94.53
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.25
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	94.23
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.92
1paa_A	30	Yeast transcription factor ADR1; transcription reg	93.89
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.37
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	92.8
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	89.84
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	89.21
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	88.99
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	85.17
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	80.91

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.47  E-value=7.5e-15  Score=84.34  Aligned_cols=47  Identities=21%  Similarity=0.382  Sum_probs=44.9

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |.|...+.|..|+++|+|++||.|..|+++|...++|..|+++ |+|.
T Consensus        12 k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Htge   58 (60)
T 4gzn_C           12 KTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQNK   58 (60)
T ss_dssp             CEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GSCC
T ss_pred             CEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cCCC
Confidence            5789999999999999999999999999999999999999999 9985

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.25  E-value=1.6e-12  Score=72.05  Aligned_cols=49  Identities=18%  Similarity=0.255  Sum_probs=45.4

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      |.|...+.|..|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   52 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLEL-RHFAKP   52 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHH-HTTTSC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHH-hccCCC
Confidence            5788889999999999999999999999999999999999999 988654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.20  E-value=6.7e-12  Score=76.60  Aligned_cols=48  Identities=17%  Similarity=0.182  Sum_probs=42.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |.|...+.|..|+++|++++||.|..|++.|....+|..|++..|++.
T Consensus        36 k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           36 ESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            578999999999999999999999999999999999999975327764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.15  E-value=1.2e-11  Score=72.37  Aligned_cols=49  Identities=20%  Similarity=0.336  Sum_probs=45.0

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +.|...+.|..|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus        25 k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   73 (74)
T 2lce_A           25 ASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI-HSGEKP   73 (74)
T ss_dssp             CCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH-HCCSCC
T ss_pred             ceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh-cCCCCC
Confidence            5688899999999999999999999999999999999999999 887643

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.14  E-value=2.3e-11  Score=67.41  Aligned_cols=47  Identities=23%  Similarity=0.347  Sum_probs=43.8

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|...+.|..|+++|++++||.|..|++.|.....|..|+++ |++.
T Consensus         9 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~   55 (57)
T 1bbo_A            9 IRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS-KAHS   55 (57)
T ss_dssp             CBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS-SSSC
T ss_pred             CcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH-hccc
Confidence            4688899999999999999999999999999999999999999 7764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=3.6e-11  Score=70.78  Aligned_cols=50  Identities=24%  Similarity=0.384  Sum_probs=45.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++..++
T Consensus        26 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~p~   75 (77)
T 2cot_A           26 KSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV-HTGSGPS   75 (77)
T ss_dssp             CBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGG-SCCCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHH-hCCCCCC
Confidence            4688899999999999999999999999999999999999999 9886543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.08  E-value=5.3e-11  Score=60.39  Aligned_cols=36  Identities=25%  Similarity=0.560  Sum_probs=33.8

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      .|+++|++++||.|+.|++.|.....|..|+++ |++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~   36 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHH-hcc
Confidence            378999999999999999999999999999999 876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.08  E-value=2.4e-11  Score=67.36  Aligned_cols=45  Identities=27%  Similarity=0.394  Sum_probs=42.0

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      +.|...+.|..|+++|++++||.|+.|++.|.....|..|+++ |.
T Consensus        12 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-hh   56 (57)
T 3uk3_C           12 KFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER-HH   56 (57)
T ss_dssp             CBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH-HC
T ss_pred             chhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH-hc
Confidence            4688999999999999999999999999999999999999998 54

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.07  E-value=7.1e-11  Score=61.63  Aligned_cols=38  Identities=24%  Similarity=0.474  Sum_probs=35.4

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      |+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   38 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRT-HAGESG   38 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGG-GCCCCS
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHh-cCCCCC
Confidence            78899999999999999999999999999999 988654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.6e-11  Score=62.58  Aligned_cols=40  Identities=23%  Similarity=0.503  Sum_probs=36.8

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~   41 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERT-HAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGG-GSSCSCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhH-hcCCCCC
Confidence            589999999999999999999999999999999 9886553

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=3.7e-11  Score=69.50  Aligned_cols=48  Identities=17%  Similarity=0.202  Sum_probs=43.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFE   49 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~   49 (116)
                      +.|.....|..|+++|++++||.|.+|++.|.....|..|+++ |++..
T Consensus        17 k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~   64 (70)
T 1x5w_A           17 YSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDM   64 (70)
T ss_dssp             CEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHH-HHSSS
T ss_pred             cccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHH-HhCCC
Confidence            4688889999999999999999999999999999999999999 76644

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=8.9e-11  Score=61.90  Aligned_cols=39  Identities=18%  Similarity=0.497  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HARKSG   40 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHH-CCCCCS
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.8e-11  Score=61.37  Aligned_cols=38  Identities=21%  Similarity=0.434  Sum_probs=35.3

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      |+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   38 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKM-HTVKSG   38 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHH-TSCCSS
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHH-hCCCCC
Confidence            78899999999999999999999999999999 988654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.9e-11  Score=61.84  Aligned_cols=39  Identities=23%  Similarity=0.439  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|+|++||.|..|++.|.....|..|+++ |++..+
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   39 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HTGSGP   39 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGG-TSCCSC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHH-hCCCCC
Confidence            488999999999999999999999999999999 988654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=9e-11  Score=65.70  Aligned_cols=47  Identities=23%  Similarity=0.451  Sum_probs=43.0

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHh-HhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHV-SSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~-~~~h~~~   48 (116)
                      +.|...+.|..|+++|++++||.|..|++.|.....|..|+ ++ |.+.
T Consensus        10 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~-H~~~   57 (60)
T 2adr_A           10 RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKI-HSGN   57 (60)
T ss_dssp             CCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTT-SCCS
T ss_pred             cccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHH-cCCc
Confidence            46888999999999999999999999999999999999997 56 8764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=4.1e-11  Score=69.73  Aligned_cols=47  Identities=23%  Similarity=0.301  Sum_probs=34.3

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++.
T Consensus        22 k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~   68 (72)
T 1x6e_A           22 KAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI-HTSG   68 (72)
T ss_dssp             CEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH-HHSS
T ss_pred             CccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh-cCCC
Confidence            3466677777777777777777777777777777777777777 6553

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.3e-11  Score=61.66  Aligned_cols=39  Identities=21%  Similarity=0.414  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HTGESG   40 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHH-TTTSSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHH-hCCCCC
Confidence            689999999999999999999999999999999 988654

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=62.02  Aligned_cols=39  Identities=23%  Similarity=0.439  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-HTKQKP   40 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHH-TSCCCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHH-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=62.28  Aligned_cols=39  Identities=21%  Similarity=0.396  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI-HTGEKP   40 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTT-TSCCCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8e-11  Score=62.74  Aligned_cols=39  Identities=23%  Similarity=0.443  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERH   40 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHH-HTCCCB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=1.2e-10  Score=61.81  Aligned_cols=39  Identities=21%  Similarity=0.428  Sum_probs=36.5

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HTGVKP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGG-SSSCCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHH-hCCCCC
Confidence            689999999999999999999999999999999 988654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=61.96  Aligned_cols=39  Identities=23%  Similarity=0.452  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGG-GSSCCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHH-hcCCCC
Confidence            689999999999999999999999999999999 988654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=62.22  Aligned_cols=39  Identities=21%  Similarity=0.413  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKP   40 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTT-TTTSCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8e-11  Score=62.59  Aligned_cols=39  Identities=23%  Similarity=0.461  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HSGEKP   40 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHH-HCCCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=61.99  Aligned_cols=39  Identities=15%  Similarity=0.404  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKP   40 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG-GTTCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHh-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=62.13  Aligned_cols=39  Identities=23%  Similarity=0.468  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKP   40 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGG-GCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.03  E-value=1.1e-10  Score=62.23  Aligned_cols=39  Identities=21%  Similarity=0.447  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HTGEKP   40 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHH-HSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHH-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=1e-10  Score=62.33  Aligned_cols=39  Identities=21%  Similarity=0.428  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHH-HTTSCS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.6e-11  Score=62.43  Aligned_cols=39  Identities=23%  Similarity=0.430  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETL   40 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHH-HSSCCS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHH-hCCCCC
Confidence            689999999999999999999999999999999 888654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=61.81  Aligned_cols=39  Identities=18%  Similarity=0.376  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKP   40 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGG-GCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.4e-10  Score=61.60  Aligned_cols=39  Identities=18%  Similarity=0.393  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p   40 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKP   40 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGG-TSSCCS
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.9e-11  Score=61.56  Aligned_cols=39  Identities=21%  Similarity=0.405  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HTGESG   40 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT-TCCSSS
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=61.56  Aligned_cols=39  Identities=15%  Similarity=0.369  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HTGEKP   40 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGG-TSCSSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=61.42  Aligned_cols=39  Identities=18%  Similarity=0.358  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-HVDDKH   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHH-CCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHH-hCCCCC
Confidence            689999999999999999999999999999999 988654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1e-10  Score=61.56  Aligned_cols=39  Identities=18%  Similarity=0.463  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSG   40 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTT-SSSSCS
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 888654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.3e-10  Score=60.67  Aligned_cols=39  Identities=23%  Similarity=0.369  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   39 (42)
T 2eos_A            1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGP   39 (42)
T ss_dssp             CCCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT-TSCCSS
T ss_pred             CCCcccCCCCCEECCCCCCccCCHHHHHHHHHh-cCCCCC
Confidence            378999999999999999999999999999999 988654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.4e-10  Score=61.68  Aligned_cols=39  Identities=21%  Similarity=0.436  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKP   40 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGG-TSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.02  E-value=1.6e-10  Score=60.14  Aligned_cols=38  Identities=24%  Similarity=0.399  Sum_probs=35.5

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      |+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~k~   39 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGP   39 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHH-TTCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhh-cCCCCC
Confidence            78999999999999999999999999999999 988654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=62.25  Aligned_cols=40  Identities=18%  Similarity=0.379  Sum_probs=36.5

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   41 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSS   41 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH-CSSCCSC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCC
Confidence            488999999999999999999999999999999 9886543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=61.92  Aligned_cols=39  Identities=13%  Similarity=0.327  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~   40 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-HVGEKP   40 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGG-GSSSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=62.07  Aligned_cols=39  Identities=18%  Similarity=0.417  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT-TTTSSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHh-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=61.78  Aligned_cols=39  Identities=15%  Similarity=0.353  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKP   40 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH-CCSSSC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=61.73  Aligned_cols=39  Identities=18%  Similarity=0.332  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHH-HSCCCT
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=61.89  Aligned_cols=39  Identities=23%  Similarity=0.460  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~   40 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHH-HCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.5e-11  Score=61.30  Aligned_cols=39  Identities=26%  Similarity=0.377  Sum_probs=35.7

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   39 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGP   39 (42)
T ss_dssp             CCCCCCCSSCSEECTTTCCEESSHHHHHHHTHH-HHSCCS
T ss_pred             CCCcccCCCCCEeCCCcChhhCCHHHHHHHHHH-cCCCCC
Confidence            378999999999999999999999999999999 887654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=1.2e-10  Score=61.89  Aligned_cols=39  Identities=15%  Similarity=0.376  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HTGEKP   40 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTG-GGCCCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=61.99  Aligned_cols=39  Identities=23%  Similarity=0.427  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS-HTGEKP   40 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHH-HSSSSC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=61.88  Aligned_cols=39  Identities=21%  Similarity=0.472  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRT-HAGEKP   40 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHH-HTTSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=61.79  Aligned_cols=39  Identities=21%  Similarity=0.422  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HTGENP   40 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGG-GSSSCC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHH-hCCCCC
Confidence            689999999999999999999999999999999 988654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.4e-10  Score=61.56  Aligned_cols=39  Identities=18%  Similarity=0.420  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HTGEKP   40 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHT-SCSSSS
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.1e-11  Score=62.44  Aligned_cols=39  Identities=21%  Similarity=0.437  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKP   40 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT-TSCSCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.8e-10  Score=60.73  Aligned_cols=40  Identities=20%  Similarity=0.406  Sum_probs=36.7

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~   41 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKT-HAAKSGP   41 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGG-GCCCCCT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCc
Confidence            689999999999999999999999999999999 9886543

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=61.71  Aligned_cols=39  Identities=15%  Similarity=0.300  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HTGENP   40 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTT-TTTSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHH-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.6e-11  Score=62.61  Aligned_cols=39  Identities=18%  Similarity=0.549  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|+|++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HFREKS   40 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HHSTTS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHH-HcCCCC
Confidence            689999999999999999999999999999999 887644

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=61.39  Aligned_cols=39  Identities=21%  Similarity=0.418  Sum_probs=36.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HTGEKP   40 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHT-TSSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=61.81  Aligned_cols=39  Identities=21%  Similarity=0.403  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT-TCCSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.5e-10  Score=61.49  Aligned_cols=39  Identities=23%  Similarity=0.435  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTT-TSSCCS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 888654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.4e-10  Score=61.11  Aligned_cols=38  Identities=21%  Similarity=0.422  Sum_probs=35.3

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      |+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   38 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQT-HAEEKP   38 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHH-HTSSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            78899999999999999999999999999999 887654

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.6e-10  Score=61.43  Aligned_cols=39  Identities=18%  Similarity=0.420  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HTGEKP   40 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTT-TCCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhh-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=61.39  Aligned_cols=39  Identities=15%  Similarity=0.345  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HTAEKP   40 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHH-TTCCCS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.6e-10  Score=61.39  Aligned_cols=39  Identities=15%  Similarity=0.255  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKC   40 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTT-TCCSCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.00  E-value=2.2e-11  Score=79.78  Aligned_cols=65  Identities=14%  Similarity=0.104  Sum_probs=45.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      +.|...+.|..|+++|+|++||.|+.|++.|.....|..|+++ |++..+       +.|.++.+.+.....+
T Consensus        30 k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~-------~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           30 RSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-HTGERR-------YQCLACGKSFINYQFM   94 (133)
T ss_dssp             CEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-HHTCCC-------EEESSSCCEESSHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc-cCCCcc-------ccCCCCCCCcCCHHHH
Confidence            4577777777787777777778887788778777778778777 776543       4566666555544333

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=61.98  Aligned_cols=39  Identities=18%  Similarity=0.319  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKP   40 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT-TSSSCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=61.50  Aligned_cols=39  Identities=18%  Similarity=0.414  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HTGEKP   40 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHH-HSSSSC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHH-HCCCCC
Confidence            689999999999999999999999999999999 988654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=61.47  Aligned_cols=39  Identities=21%  Similarity=0.473  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~   40 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKP   40 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGG-GSCCCS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.7e-10  Score=61.31  Aligned_cols=39  Identities=21%  Similarity=0.418  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKP   40 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTT-TCCCCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCC
Confidence            588999999999999999999999999999999 988654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.7e-10  Score=61.35  Aligned_cols=39  Identities=15%  Similarity=0.376  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HTGERP   40 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT-TSCCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.00  E-value=2.1e-10  Score=60.93  Aligned_cols=39  Identities=18%  Similarity=0.387  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKP   40 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGG-GTSCCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=62.02  Aligned_cols=39  Identities=21%  Similarity=0.388  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKP   40 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHH-HHCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 887654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=61.70  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=36.0

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERP   40 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTT-TTSCCS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHh-cCCCCC
Confidence            478999999999999999999999999999999 988654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=61.36  Aligned_cols=39  Identities=18%  Similarity=0.380  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HTGERH   40 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHH-HSCCSS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHh-cCCCCC
Confidence            689999999999999999999999999999999 888654

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=61.75  Aligned_cols=39  Identities=21%  Similarity=0.428  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HTGGKP   40 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHH-HHSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 887654

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.1e-10  Score=60.94  Aligned_cols=39  Identities=23%  Similarity=0.381  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|+.|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HTGEKP   40 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGG-GCCCSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHh-cCCCCC
Confidence            689999999999999999999999999999999 988654

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=61.23  Aligned_cols=40  Identities=20%  Similarity=0.434  Sum_probs=36.6

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~   41 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSGP   41 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHH-HCCCCCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHH-hCCCCCC
Confidence            589999999999999999999999999999999 8886543

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.1e-10  Score=61.02  Aligned_cols=39  Identities=15%  Similarity=0.407  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKP   40 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGG-GSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=61.79  Aligned_cols=39  Identities=21%  Similarity=0.368  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHH-HHCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 887654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.99  E-value=2e-10  Score=61.18  Aligned_cols=39  Identities=15%  Similarity=0.405  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHH-HSCCSS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHH-cCCCCC
Confidence            489999999999999999999999999999999 988654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.3e-10  Score=60.89  Aligned_cols=39  Identities=21%  Similarity=0.462  Sum_probs=35.8

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCC-CCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK-FET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~-~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++ ..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~   41 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI-HTRGVKS   41 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTT-CCSCCTT
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHH-cCCCCCC
Confidence            589999999999999999999999999999999 887 543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=61.19  Aligned_cols=39  Identities=13%  Similarity=0.363  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGG-GSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.1e-10  Score=61.04  Aligned_cols=39  Identities=13%  Similarity=0.240  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTT-TSCSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHH-hCCCCC
Confidence            689999999999999999999999999999999 988654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=61.29  Aligned_cols=39  Identities=21%  Similarity=0.439  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKP   40 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTT-SCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 988654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=61.11  Aligned_cols=39  Identities=21%  Similarity=0.502  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HTGYRP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHH-HTCCCS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.7e-10  Score=60.54  Aligned_cols=39  Identities=18%  Similarity=0.346  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKP   40 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGG-GTTCCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHH-hCCCCC
Confidence            488999999999999999999999999999999 988654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=61.31  Aligned_cols=39  Identities=23%  Similarity=0.466  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-HTGEKP   40 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTT-TTTCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 887654

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.8e-10  Score=60.53  Aligned_cols=39  Identities=21%  Similarity=0.412  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKP   40 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGG-SCCSCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCC
Confidence            478899999999999999999999999999999 988654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=62.12  Aligned_cols=39  Identities=21%  Similarity=0.421  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~   40 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-HERTDP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHH-HHHSCC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 877554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.4e-10  Score=60.85  Aligned_cols=39  Identities=18%  Similarity=0.406  Sum_probs=36.0

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~   40 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGEKT   40 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGG-GGSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHh-cCCCCC
Confidence            488999999999999999999999999999999 888654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=8.6e-11  Score=68.28  Aligned_cols=42  Identities=19%  Similarity=0.423  Sum_probs=27.7

Q ss_pred             CcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHh
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .|.....|..|+++|++++||.|..|++.|.....|..|+++
T Consensus        30 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           30 RFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             ccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            455566666666666666666666666666666666666665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=60.82  Aligned_cols=39  Identities=18%  Similarity=0.336  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HTGEKP   40 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTT-TTTCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHH-hCCCCC
Confidence            488999999999999999999999999999999 988654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=61.10  Aligned_cols=39  Identities=15%  Similarity=0.336  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-HTGEKP   40 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHH-HTSSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHH-cCCCCC
Confidence            588999999999999999999999999999999 988654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=60.87  Aligned_cols=39  Identities=23%  Similarity=0.523  Sum_probs=36.3

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HTGEKP   40 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHH-HSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHH-cCCCCC
Confidence            589999999999999999999999999999999 988654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=1.9e-10  Score=72.37  Aligned_cols=58  Identities=22%  Similarity=0.221  Sum_probs=48.6

Q ss_pred             CCcCCchhhhhhcc-cc---CCCcceeccccchhccCchhhHHH-hHhccCCCCChhHHHHHHHhhcCCCC
Q 044362            1 KKKKAKYDGRTHSL-PH---KKNGPYTCPKCNQAFAKSQIYAAH-VSSGHYKFETPEQRAERLAARYPKRN   66 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~H---tgekp~~C~~C~k~F~~~~~l~~H-~~~~h~~~~~~~~~~~~~~~~~~~~~   66 (116)
                      +.|...+.|..|++ +|   ++++||.|..|++.|.....|..| +++ |++..+       |.|.+.+.+
T Consensus        26 k~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~-Htgekp-------y~C~~~~~~   88 (102)
T 2ghf_A           26 FQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY-HPGEEN-------FKLTMVKRN   88 (102)
T ss_dssp             CEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT-STTCCC-------EEEEECCCS
T ss_pred             CccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh-cCCCCC-------eeCCcccCC
Confidence            46888999999997 59   678999999999999999999999 789 998655       566664443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=60.61  Aligned_cols=39  Identities=21%  Similarity=0.476  Sum_probs=36.0

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HSGEKP   40 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT-TCCSCS
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHH-hCCCCC
Confidence            488999999999999999999999999999999 988654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.97  E-value=3e-10  Score=60.45  Aligned_cols=39  Identities=18%  Similarity=0.414  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HTREKP   40 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            588999999999999999999999999999999 988654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.2e-10  Score=60.25  Aligned_cols=39  Identities=18%  Similarity=0.392  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HSGEKP   40 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHH-hCCCCC
Confidence            588999999999999999999999999999999 988654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=60.54  Aligned_cols=39  Identities=18%  Similarity=0.367  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HTGERP   40 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTT-SCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHh-hCCCCC
Confidence            588999999999999999999999999999999 988654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=61.10  Aligned_cols=39  Identities=21%  Similarity=0.425  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   40 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKP   40 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHH-HHSCCC
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh-cCCCCC
Confidence            589999999999999999999999999999999 887654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=1.6e-10  Score=71.52  Aligned_cols=38  Identities=16%  Similarity=0.241  Sum_probs=18.6

Q ss_pred             chhhhhhccccCCCcceeccccchhc-cCchhhHHHhHh
Q 044362            6 KYDGRTHSLPHKKNGPYTCPKCNQAF-AKSQIYAAHVSS   43 (116)
Q Consensus         6 ks~L~~H~r~Htgekp~~C~~C~k~F-~~~~~l~~H~~~   43 (116)
                      .+.|..|.+.|++++||.|+.|++.| ....+|..|+++
T Consensus        19 ~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~   57 (96)
T 2ctd_A           19 GSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMEN   57 (96)
T ss_dssp             TCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHH
T ss_pred             chHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHH
Confidence            33444444444445555555555555 445555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.8e-10  Score=60.58  Aligned_cols=39  Identities=21%  Similarity=0.450  Sum_probs=36.1

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-HTGEKP   40 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHH-HCCCCS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHH-hCCCCC
Confidence            588999999999999999999999999999999 988654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.6e-10  Score=57.72  Aligned_cols=35  Identities=17%  Similarity=0.556  Sum_probs=32.4

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +++|++++||.|..|++.|.....|..|+++ |++.
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~   35 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHPE   35 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCSS
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcCC
Confidence            4689999999999999999999999999999 8875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.8e-10  Score=60.60  Aligned_cols=39  Identities=21%  Similarity=0.391  Sum_probs=36.0

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhH-hccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVS-SGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~-~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|++ + |++..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~-H~~~k~   41 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYY-HTGEKP   41 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTT-TTTSCS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhh-cCCCCC
Confidence            58999999999999999999999999999999 8 887654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.3e-10  Score=60.20  Aligned_cols=39  Identities=13%  Similarity=0.253  Sum_probs=36.2

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVL-HMGQKN   40 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHH-HSCCSC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHH-hCCCCC
Confidence            588999999999999999999999999999999 988654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.9e-10  Score=57.40  Aligned_cols=35  Identities=14%  Similarity=0.345  Sum_probs=31.8

Q ss_pred             ccccCCCcceeccccchhccCchhhHHH-hHhccCCC
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAH-VSSGHYKF   48 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H-~~~~h~~~   48 (116)
                      +++|++++||.|..|++.|.....|..| +++ |++.
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~-H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQK-HSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHH-TCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHH-ccCc
Confidence            4689999999999999999999999999 888 8763

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=61.61  Aligned_cols=39  Identities=18%  Similarity=0.497  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HSREKS   40 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH-HHHTTC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            589999999999999999999999999999999 887544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=2.1e-10  Score=67.39  Aligned_cols=57  Identities=14%  Similarity=0.323  Sum_probs=49.0

Q ss_pred             CCcCCchhhhhhcc-ccCCCcceeccc--cchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCC
Q 044362            1 KKKKAKYDGRTHSL-PHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKR   65 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~   65 (116)
                      +.|.....|..|++ .|++++||.|..  |++.|.....|..|+++ |++..+       |.|.++.+
T Consensus        17 ~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~~~-------~~C~~C~k   76 (79)
T 2dlk_A           17 RIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL-HSDTRD-------YICEFSGP   76 (79)
T ss_dssp             CEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHH-HHTSCC-------CSCCSSSC
T ss_pred             CccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHH-hCCCCC-------eeCCCCCC
Confidence            46888999999999 799999999999  99999999999999999 887644       55655544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.3e-10  Score=59.26  Aligned_cols=39  Identities=15%  Similarity=0.288  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQAL-HAGESG   40 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH-HTTSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-HCCCCC
Confidence            478999999999999999999999999999999 988654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1e-10  Score=72.17  Aligned_cols=68  Identities=12%  Similarity=0.114  Sum_probs=51.2

Q ss_pred             cCCchhhhhhccccCCCcceeccccchhcc-CchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceecCCCc
Q 044362            3 KKAKYDGRTHSLPHKKNGPYTCPKCNQAFA-KSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEGL   77 (116)
Q Consensus         3 ~~~ks~L~~H~r~Htgekp~~C~~C~k~F~-~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (116)
                      +...+.+..|+++|++++||.|..|++.|. ....|..|+++ |++.      .+.|.|.+|.+.+.....+..++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~------~~~~~C~~C~k~F~~~~~L~~H~   74 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEV-CQKL------QDALKCQHCRKQFKSKAGLNYHT   74 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHH-HHHH------HHHHSCSSSCCCCSCHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHH-HcCC------CCCEECCCCCCccCCHHHHHHHH
Confidence            445566788888999999999999999999 89999999888 6541      24488888887777655554443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3e-10  Score=60.51  Aligned_cols=39  Identities=21%  Similarity=0.422  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HTGQRP   40 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHH-HHSCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHH-cCCCCC
Confidence            488999999999999999999999999999999 887654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.91  E-value=6.3e-10  Score=68.77  Aligned_cols=66  Identities=21%  Similarity=0.332  Sum_probs=52.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceecC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTS   74 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++...       |.|.++.+.+.....+.
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           25 RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI-HSKEKP-------FKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG-SCCCCT-------TSCSSSCCCCSSHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH-hCCCCC-------eECCCcCCcccCHHHHH
Confidence            4678888899999999999999999999999999999999998 877543       67777777776554443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=3.9e-10  Score=64.20  Aligned_cols=46  Identities=24%  Similarity=0.368  Sum_probs=35.5

Q ss_pred             CCcCCchhhhhhccc-c-CCCcceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLP-H-KKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~-H-tgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|...+.|..|+++ | ++++||.|+.|++.|.....|..|+++ |.+
T Consensus        18 k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~-~H~   65 (66)
T 2drp_A           18 RVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI-IHK   65 (66)
T ss_dssp             CEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHH-HTC
T ss_pred             chhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHH-HcC
Confidence            357777788888877 6 578888888888888888888888877 544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.8e-10  Score=59.62  Aligned_cols=39  Identities=15%  Similarity=0.336  Sum_probs=35.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~   40 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-HTGEKL   40 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHH-HHCCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHH-HcCCCC
Confidence            478999999999999999999999999999999 887654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=2.2e-10  Score=67.29  Aligned_cols=60  Identities=17%  Similarity=0.267  Sum_probs=46.5

Q ss_pred             hhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362            8 DGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus         8 ~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      +|.+|+++|++++||.|..|++.|.....|..|++.+|.+...+      |.|.++.+.+.....+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~------~~C~~C~~~f~~~~~L   61 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK------FHCPHCDTVIARKSDL   61 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS------EECSSSSCEESSHHHH
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc------cCCCCCCCccCCHHHH
Confidence            46789999999999999999999999999999987327765344      7777777666554433

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.90  E-value=5.1e-10  Score=67.92  Aligned_cols=65  Identities=22%  Similarity=0.226  Sum_probs=52.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |.+...       |.|.++.+.+.....+
T Consensus        16 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A           16 KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSDERP-------FKCQICPYASRNSSQL   80 (96)
T ss_dssp             BCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCCCC-------EECSSSSCEESSHHHH
T ss_pred             CccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHH-hCCCCC-------ccCCCCCCccCCHHHH
Confidence            4678888999999999999999999999999999999999999 877544       5677776665554333

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.89  E-value=3.4e-10  Score=74.04  Aligned_cols=64  Identities=16%  Similarity=0.220  Sum_probs=50.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRN   66 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~   66 (116)
                      +.|...+.|..|+++|+|++||.|+.|++.|.....|..|+++ |++.++. ...+.|.|.++...
T Consensus        58 k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-hh~~~p~-~~~k~~~C~~C~k~  121 (133)
T 2lt7_A           58 KVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS-VHSQDPS-GDSKLYRLHPCRSL  121 (133)
T ss_dssp             CEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHH-HTCCCTT-SSSCCEEECCCCSS
T ss_pred             eecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHH-hcCCCCC-CCCCCeecCCCCch
Confidence            4688999999999999999999999999999999999999999 6654332 11223566666543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.89  E-value=1.1e-09  Score=54.50  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=30.8

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +|++++||.|..|++.|.....|..|+++ |++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~   33 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIRE-VHGA   33 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHH-TSCT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHH-HcCC
Confidence            48899999999999999999999999999 8874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.88  E-value=2.8e-10  Score=67.02  Aligned_cols=61  Identities=23%  Similarity=0.263  Sum_probs=48.1

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++..+       +.|.++.+.+..
T Consensus         9 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~   69 (82)
T 2kmk_A            9 KSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTGEKP-------HKCQVCGKAFSQ   69 (82)
T ss_dssp             CEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHH-HHTCCC-------EECTTTSCEESS
T ss_pred             ccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHH-hcCCCC-------CcCCCcchhhCC
Confidence            4577888899999999999999999999999999999999988 776543       556666554443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.88  E-value=1.2e-09  Score=54.49  Aligned_cols=34  Identities=24%  Similarity=0.412  Sum_probs=31.2

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCCC
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFE   49 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~   49 (116)
                      +|++++||.|..|++.|.....|..|+++ |++..
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKV-HTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGG-GTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHH-cCCCC
Confidence            58999999999999999999999999999 88743

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.87  E-value=3.7e-10  Score=67.67  Aligned_cols=62  Identities=18%  Similarity=0.307  Sum_probs=46.8

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+...
T Consensus        14 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~   75 (90)
T 1a1h_A           14 RRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEKP-------FACDICGRKFARS   75 (90)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCCCC-------EECTTTCCEESSH
T ss_pred             CccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHH-cCCCCC-------ccCCCCCchhCCH
Confidence            3577778888888888888888888888888888888888888 776543       5566665554443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1e-09  Score=57.14  Aligned_cols=33  Identities=18%  Similarity=0.354  Sum_probs=30.6

Q ss_pred             ccCCCcceeccc--cchhccCchhhHHHhHhccCCC
Q 044362           15 PHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        15 ~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .++|++||.|..  |+++|...+.|..|+++ |++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~-Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKV-HTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHH-HSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCCC
Confidence            578999999986  99999999999999999 9875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1e-09  Score=58.01  Aligned_cols=38  Identities=16%  Similarity=0.372  Sum_probs=34.9

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +.++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKS   40 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTT-TSSCCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHH-hCCCCC
Confidence            56889999999999999999999999999999 988654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.86  E-value=1e-09  Score=59.31  Aligned_cols=36  Identities=22%  Similarity=0.481  Sum_probs=30.1

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhH-hccCCCCCh
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVS-SGHYKFETP   51 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~-~~h~~~~~~   51 (116)
                      +|+|++||.|.+|++.|....+|..|++ + |++....
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~-H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHS-HLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHS-SCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhh-cCCCCCC
Confidence            5899999999999999999999999999 8 9886544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.86  E-value=5.3e-10  Score=68.24  Aligned_cols=62  Identities=21%  Similarity=0.324  Sum_probs=51.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecc--ccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      +.|.....|..|+++|++++||.|.  .|++.|.....|..|+++ |++..+       |.|.++.+.+...
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~   88 (100)
T 2ebt_A           25 KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTGAKP-------FQCGVCNRSFSRS   88 (100)
T ss_dssp             CEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHH-HTSCCS-------CBCSSSCCBCSSH
T ss_pred             CcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHH-hCCCCC-------eECCCCcCccCCH
Confidence            4578888999999999999999996  599999999999999999 887544       6777777666544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.85  E-value=5.5e-10  Score=64.70  Aligned_cols=43  Identities=23%  Similarity=0.461  Sum_probs=37.1

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~   43 (116)
                      +.|...+.|..|+++|++++||.|.+  |++.|.....|..|+++
T Consensus        27 k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           27 KTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            45778888999999999999999965  99999999999999876

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.7e-09  Score=55.95  Aligned_cols=37  Identities=19%  Similarity=0.327  Sum_probs=33.7

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   38 (41)
T 2ept_A            2 SSGSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGP   38 (41)
T ss_dssp             CSSCCCCCCEECSSSCCEESSHHHHHHHGGG-CCCCSC
T ss_pred             CCccCCCCCeECCCCCCCcCCHHHHHHHHHH-hCCCCC
Confidence            3679999999999999999999999999999 988654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=5.5e-10  Score=65.65  Aligned_cols=48  Identities=25%  Similarity=0.316  Sum_probs=37.9

Q ss_pred             CCcCCchhhhhhccccCC---CcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKK---NGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htg---ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|.....|..|+++|++   ++||.|..|++.|.....|..|++.+|.+.
T Consensus        15 k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A           15 FTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            457778888888888886   788888888888888888888885535553

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.84  E-value=7e-10  Score=67.20  Aligned_cols=68  Identities=25%  Similarity=0.419  Sum_probs=55.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC-CChhHHHHHHHhhcCCCCCCCceecCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF-ETPEQRAERLAARYPKRNTLQPVDTSE   75 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |.+. ..+      |.|.++.+.+.....+..
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~------~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A           15 KIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKP------YICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHH-HCCCCCSS------BCCSSSCCCBSSHHHHHH
T ss_pred             CccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH-hcCCCCCc------eECCCccchhCCHHHHHH
Confidence            4688889999999999999999999999999999999999999 7775 233      778888776665444433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.84  E-value=9.7e-10  Score=67.90  Aligned_cols=50  Identities=28%  Similarity=0.569  Sum_probs=45.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++..++
T Consensus        53 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~  102 (106)
T 2ee8_A           53 KAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL-HMQTSSP  102 (106)
T ss_dssp             CBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHH-TTSCCCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHH-hCCCCCC
Confidence            4688889999999999999999999999999999999999999 8886554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.83  E-value=9.5e-10  Score=66.70  Aligned_cols=50  Identities=22%  Similarity=0.292  Sum_probs=45.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++...+
T Consensus        44 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~p   93 (96)
T 2dmd_A           44 YAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS-HTGDSGP   93 (96)
T ss_dssp             CEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTT-CCSCCCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH-hcCCCCC
Confidence            4578888999999999999999999999999999999999999 8876544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.4e-09  Score=53.80  Aligned_cols=34  Identities=21%  Similarity=0.369  Sum_probs=31.4

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ++|++++||.|..|++.|.....|..|+++ |++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNR-HSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHH-SSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHH-hccC
Confidence            468999999999999999999999999999 8764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.6e-09  Score=57.57  Aligned_cols=38  Identities=13%  Similarity=0.250  Sum_probs=34.8

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      ++++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~   40 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRI-HTGEKP   40 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHH-HSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHH-hCCCCC
Confidence            46889999999999999999999999999999 988654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.5e-09  Score=54.86  Aligned_cols=34  Identities=21%  Similarity=0.372  Sum_probs=31.3

Q ss_pred             cccCCCcceeccccchhccCc-hhhHHHhHhccCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKS-QIYAAHVSSGHYKF   48 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~-~~l~~H~~~~h~~~   48 (116)
                      ++|++++||.|..|++.|... ..|..|+++ |++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~-H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWA-HEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHH-HHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHh-cCCC
Confidence            579999999999999999999 999999999 8763

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.3e-09  Score=56.82  Aligned_cols=38  Identities=18%  Similarity=0.374  Sum_probs=34.8

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      ++++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-HTGEKP   40 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTT-TSSSCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHH-hCCCCC
Confidence            57889999999999999999999999999999 888654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.80  E-value=9.8e-10  Score=65.67  Aligned_cols=62  Identities=21%  Similarity=0.326  Sum_probs=51.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecc--ccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      +.|.....|..|+++|++++||.|+  .|++.|.....|..|+++ |++..+       |.|.++.+.+...
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~   78 (89)
T 2wbs_A           15 KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HTGHRP-------FQCQKCDRAFSRS   78 (89)
T ss_dssp             CEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHH-HHCCCC-------EECSSSSCEESSH
T ss_pred             CcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHH-cCCCCC-------ccCCCCCcccCCH
Confidence            4578888999999999999999997  599999999999999999 887654       5666666655443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.9e-09  Score=53.47  Aligned_cols=34  Identities=18%  Similarity=0.233  Sum_probs=31.2

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|++++||.|..|++.|.....|..|+++ |++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLV-HGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTT-TSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHH-hcCC
Confidence            468999999999999999999999999999 8763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.9e-09  Score=66.73  Aligned_cols=40  Identities=15%  Similarity=0.156  Sum_probs=34.2

Q ss_pred             CCchhhhhhccccCCCcceeccccchhccCchhhHHHhHh
Q 044362            4 KAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         4 ~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .....|..|+++|++++||.|..|++.|.....|..|+++
T Consensus        63 ~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             CCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             ccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHH
Confidence            6777888888888888888888888888888888888887

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.78  E-value=3.3e-09  Score=54.31  Aligned_cols=35  Identities=23%  Similarity=0.447  Sum_probs=31.4

Q ss_pred             cCCCcceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           16 HKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        16 Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      |++++||.|..|++.|.....|..|+++ |++..++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNV-HRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHT-TCCSCTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHH-cCCCccc
Confidence            6889999999999999999999999999 9886654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=3.1e-09  Score=55.69  Aligned_cols=37  Identities=19%  Similarity=0.360  Sum_probs=33.7

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   38 (43)
T 2yrm_A            2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQ-THSDKS   38 (43)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHH-HTCTTC
T ss_pred             CcCcCCCCCEECCCCCCeeCChHHHHHHHHh-hCCCCC
Confidence            4679999999999999999999999999999 988654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3.2e-09  Score=53.14  Aligned_cols=34  Identities=26%  Similarity=0.460  Sum_probs=31.3

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .+|++++||.|..|++.|.....|..|+++ |++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRK-HTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHH-HTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHH-ccCC
Confidence            468999999999999999999999999999 8764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.2e-10  Score=69.39  Aligned_cols=49  Identities=12%  Similarity=0.189  Sum_probs=44.6

Q ss_pred             CCcC-CchhhhhhccccCC-CcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362            1 KKKK-AKYDGRTHSLPHKK-NGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus         1 k~~~-~ks~L~~H~r~Htg-ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +.|. ....|..|+++|++ ++||.|.+|++.|.....|..|+++ |++..+
T Consensus        32 k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~-h~~~kp   82 (98)
T 2gqj_A           32 VVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA-EHSAKP   82 (98)
T ss_dssp             CCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHH-HSCSCS
T ss_pred             CChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHH-HcCCCC
Confidence            4688 89999999999999 9999999999999999999999999 777543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.77  E-value=2.9e-09  Score=62.39  Aligned_cols=49  Identities=18%  Similarity=0.441  Sum_probs=42.2

Q ss_pred             CCcCCchhhhhhcc-ccCCC-cceeccccchhccCchhhHHHhHhccCCCCC
Q 044362            1 KKKKAKYDGRTHSL-PHKKN-GPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htge-kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +.|.....|..|++ .|+++ +||.|+.|++.|.....|..|++. +.+.+.
T Consensus        23 k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~-~H~~~~   73 (77)
T 2ct1_A           23 ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK-QHSYSG   73 (77)
T ss_dssp             CEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH-TSCCSC
T ss_pred             chhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH-hCCCCC
Confidence            46888999999997 78875 899999999999999999999998 554443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.77  E-value=1.6e-09  Score=65.71  Aligned_cols=50  Identities=16%  Similarity=0.186  Sum_probs=45.3

Q ss_pred             CCcCCchhhhhhccc-cCCCcc--------eeccccchhccCchhhHHHhHhccCCCCCh
Q 044362            1 KKKKAKYDGRTHSLP-HKKNGP--------YTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus         1 k~~~~ks~L~~H~r~-Htgekp--------~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      +.|.....|..|+++ |++++|        |.|..|++.|.....|..|+++ |++..++
T Consensus        33 k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~   91 (95)
T 2ej4_A           33 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV-HTGEKSG   91 (95)
T ss_dssp             CCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHH-HHTCCCC
T ss_pred             cccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHh-cCCCCCC
Confidence            468889999999998 999988        9999999999999999999999 9886553

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.77  E-value=3e-09  Score=57.02  Aligned_cols=40  Identities=13%  Similarity=0.357  Sum_probs=35.1

Q ss_pred             hhhhhccccCCCcceecc--ccchhccCchhhHHHhHhccCCC
Q 044362            8 DGRTHSLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         8 ~L~~H~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .+..|...|+|++||.|.  .|++.|....+|..|+++ |++.
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~-H~~e   46 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLED   46 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHH-HTTT
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHH-ccCC
Confidence            456667789999999996  699999999999999999 8874

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.76  E-value=8.8e-10  Score=66.01  Aligned_cols=47  Identities=23%  Similarity=0.408  Sum_probs=43.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++.
T Consensus        42 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~~~   88 (90)
T 1a1h_A           42 RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI-HLRQ   88 (90)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGG-GGC-
T ss_pred             cccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHH-hccc
Confidence            4678889999999999999999999999999999999999999 8774

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2e-09  Score=61.56  Aligned_cols=45  Identities=16%  Similarity=0.233  Sum_probs=40.4

Q ss_pred             CCcCCchhhhhhccccCCCcceecc-ccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP-KCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~-~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|. .+.|..|+++ ++++||.|+ .|++.|.....|..|+++ |...
T Consensus        18 k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~-hc~~   63 (66)
T 2eod_A           18 KEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD-SCNT   63 (66)
T ss_dssp             CEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT-TSSS
T ss_pred             CccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh-hccc
Confidence            4577 8889999999 999999999 999999999999999998 7653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.76  E-value=2.8e-09  Score=67.19  Aligned_cols=64  Identities=19%  Similarity=0.209  Sum_probs=42.3

Q ss_pred             CCcCCchhhhhhcc---ccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCcee
Q 044362            1 KKKKAKYDGRTHSL---PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVD   72 (116)
Q Consensus         1 k~~~~ks~L~~H~r---~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (116)
                      +.|.....|..|++   .|.+++||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+.....
T Consensus        43 ~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~~~  109 (124)
T 2dlq_A           43 KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS-HTGEMP-------YKCSSCSQQFMQKKD  109 (124)
T ss_dssp             CBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HSSSCS-------EECSSSCCEESSHHH
T ss_pred             chhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCC-------ccCCCccchhCCHHH
Confidence            35666777777776   35677777777777777777777777777 666433       556666555554333

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.75  E-value=1.9e-09  Score=67.04  Aligned_cols=68  Identities=16%  Similarity=0.204  Sum_probs=53.0

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceecCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTSEG   76 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |.+...       |.|.++.+.+.....+..+
T Consensus        17 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A           17 KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-HTGIKP-------YECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT-TCCCCC-------EECSSSCCEESCHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHH-cCCCCC-------eeCCCCcchhcCHHHHHHH
Confidence            4577888899999999999999999999999999999999998 877543       5677777666654444333

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.75  E-value=1.4e-09  Score=65.33  Aligned_cols=46  Identities=22%  Similarity=0.338  Sum_probs=42.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|...+.|..|+++|++++||.|..|++.|.....|..|+++ |.+
T Consensus        11 k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-h~~   56 (88)
T 1llm_C           11 RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHI   56 (88)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHH-HTH
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHH-hCC
Confidence            4688899999999999999999999999999999999999999 653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.74  E-value=1.9e-09  Score=63.94  Aligned_cols=59  Identities=14%  Similarity=0.311  Sum_probs=45.0

Q ss_pred             hhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCC---ChhHHHHHHHhhcCCCCCCCceec
Q 044362            8 DGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFE---TPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus         8 ~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~---~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      +|..|+++|++++||.|..|++.|.....|..|++. |....   .+      |.|.++.+.+.....+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~~~~~------~~C~~C~~~f~~~~~L   63 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDPNFVPAA------FVCSKCGKTFTRRNTM   63 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHH-TTCSSCCCCC------EECSSSCCEESCHHHH
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHH-hcCCcCCCcc------eECCCCCChhCCHHHH
Confidence            478899999999999999999999999999999987 55432   23      6777776666544333

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.73  E-value=3.9e-09  Score=65.46  Aligned_cols=46  Identities=17%  Similarity=0.151  Sum_probs=31.5

Q ss_pred             CcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhH-hccCCCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVS-SGHYKFE   49 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~-~~h~~~~   49 (116)
                      .|.....|..|++ |++++||.|..|++.|.....|..|++ + |++..
T Consensus        51 ~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~-H~~~~   97 (107)
T 1wjp_A           51 RFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEV-HNQNN   97 (107)
T ss_dssp             CBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHT-SCCCC
T ss_pred             ccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHH-cCCCC
Confidence            4666666777764 777777777777777777777777776 4 65543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.73  E-value=7.5e-10  Score=65.12  Aligned_cols=46  Identities=28%  Similarity=0.492  Sum_probs=42.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |+|
T Consensus        37 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~g   82 (82)
T 2kmk_A           37 KRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK-HTG   82 (82)
T ss_dssp             CEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH-HC-
T ss_pred             hhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh-hCC
Confidence            4578889999999999999999999999999999999999999 764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.71  E-value=2.3e-09  Score=72.68  Aligned_cols=62  Identities=19%  Similarity=0.342  Sum_probs=47.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      +.|.....|..|+++|++++||.|+.|++.|.....|..|+++ |++..+       |.|.++.+.+...
T Consensus       113 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~-------~~C~~C~~~f~~~  174 (190)
T 2i13_A          113 KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT-HTGEKP-------YKCPECGKSFSRR  174 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCCCC-------EECTTTCCEESSH
T ss_pred             CccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh-cCCCCC-------eECCCCCCccCCH
Confidence            3577778888888888888888888888888888888888888 777543       5666666555543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.70  E-value=4.9e-09  Score=68.83  Aligned_cols=65  Identities=28%  Similarity=0.445  Sum_probs=49.8

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCCCCChhHHHHHHHhhc--CCCCCCCceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARY--PKRNTLQPVDT   73 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   73 (116)
                      +.|.....|..|+++|++++||.|..  |++.|.....|..|+++ |++..+       |.|.+  +.+.+.....+
T Consensus        70 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-h~~~~~-------~~C~~~~C~k~f~~~~~L  138 (155)
T 2rpc_A           70 KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGEKP-------FKCEFEGCDRRFANSSDR  138 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTT-TCSSCS-------BCCSSTTCCCCBSSHHHH
T ss_pred             cccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHh-hCCCCC-------ccCCCCCCCCccCCHHHH
Confidence            46778888899999999999999987  99999999999999888 877544       56665  65555544333

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=7.2e-09  Score=51.79  Aligned_cols=33  Identities=15%  Similarity=0.231  Sum_probs=30.7

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +|++++||.|..|++.|.....|..|+++ |++.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL-HTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHH-HSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHH-hcCC
Confidence            58999999999999999999999999999 8764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.9e-09  Score=56.48  Aligned_cols=38  Identities=21%  Similarity=0.464  Sum_probs=34.3

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .+++|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT-HTREKP   40 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTH-HHHCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            46789999999999999999999999999999 887544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=8.1e-09  Score=54.43  Aligned_cols=36  Identities=28%  Similarity=0.493  Sum_probs=33.1

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      ..|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~   38 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVG   38 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHH-HSCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHH-ccCCCC
Confidence            579999999999999999999999999999 988654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.68  E-value=2.4e-09  Score=63.17  Aligned_cols=46  Identities=26%  Similarity=0.522  Sum_probs=42.9

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|...+.|..|+++|++++||.|+.  |++.|.....|..|+++ |++
T Consensus        11 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~   58 (85)
T 2j7j_A           11 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG   58 (85)
T ss_dssp             CEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHS
T ss_pred             cccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHH-hCC
Confidence            46888899999999999999999988  99999999999999999 776

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1e-08  Score=54.54  Aligned_cols=39  Identities=21%  Similarity=0.445  Sum_probs=35.3

Q ss_pred             hhccccCCCcceecc--ccchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .|.++|++++||.|.  .|++.|.....|..|+++ |++..+
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~   42 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSGVKP   42 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTT-SCCCCS
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHH-hCCCCC
Confidence            367899999999998  899999999999999999 988654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.68  E-value=9.7e-10  Score=62.70  Aligned_cols=48  Identities=10%  Similarity=0.279  Sum_probs=39.9

Q ss_pred             CCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362           18 KNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus        18 gekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      .||||.|..|++.|.....|..|+++ |++..+       |.|..+.+.+.....+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~-Ht~ekp-------~~C~~C~k~F~~~~~L   48 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRA-HLGYRP-------RSCPECGKCFRDQSEV   48 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHH-HHTCCC-------EECTTTCCEESSHHHH
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHH-hCCCcC-------eECCCCCCCcCCHHHH
Confidence            47999999999999999999999999 998765       6777777766654433

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.67  E-value=6.1e-09  Score=66.55  Aligned_cols=60  Identities=15%  Similarity=0.143  Sum_probs=41.4

Q ss_pred             cCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362            3 KKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus         3 ~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      |.....|..|+ .|++++||.|..|++.|.....|..|+++ |   +.+      |.|.++.+.+.....+
T Consensus        57 ~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H---~~~------~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           57 LDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRY-T---EHT------KVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             TTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHH-T---CCC------CBCTTTCCBCSSHHHH
T ss_pred             cCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHH-C---CCC------CCCCCCCcccCCHHHH
Confidence            34555566666 57888888888888888888888888888 6   222      5677776666554433

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.67  E-value=3.5e-09  Score=66.37  Aligned_cols=45  Identities=24%  Similarity=0.431  Sum_probs=23.9

Q ss_pred             CcCCchhhhhhccccCCCcceecc--ccchhccCchhhHHHhHhccCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      .|.....|..|+++|++++||.|.  .|++.|.....|..|+++ |.+
T Consensus        17 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~   63 (119)
T 2jp9_A           17 RYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTG   63 (119)
T ss_dssp             CBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHC
T ss_pred             hhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-cCC
Confidence            344555555555555555555555  355555555555555555 444

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.66  E-value=8.5e-09  Score=64.06  Aligned_cols=46  Identities=33%  Similarity=0.399  Sum_probs=42.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|++. |..
T Consensus        45 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~   90 (110)
T 2csh_A           45 KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS-CTK   90 (110)
T ss_dssp             CEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH-HHH
T ss_pred             cccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH-ccc
Confidence            4688899999999999999999999999999999999999998 543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.1e-08  Score=51.22  Aligned_cols=33  Identities=24%  Similarity=0.416  Sum_probs=30.4

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .|++++||.|..|++.|.....|..|+++ |++.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRI-HTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHH-HCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHH-hCCC
Confidence            57899999999999999999999999999 8764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.66  E-value=9.8e-09  Score=60.81  Aligned_cols=49  Identities=18%  Similarity=0.276  Sum_probs=42.8

Q ss_pred             CCcCCchhhhhhccccCCC----cceeccccchhccCchhhHHHhHhccCCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN----GPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge----kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +.|.....|..|+++|.++    +||.|..|++.|.....|..|+++ |++...
T Consensus        23 ~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~   75 (86)
T 1x6h_A           23 KTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN-CAGPDG   75 (86)
T ss_dssp             CEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHH-CCCCCS
T ss_pred             CccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHH-ccCCCC
Confidence            4688889999999877665    799999999999999999999999 887654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.3e-08  Score=59.84  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=32.0

Q ss_pred             ccCCCcceeccc--cchhccCchhhHHHh-HhccCCCCCh
Q 044362           15 PHKKNGPYTCPK--CNQAFAKSQIYAAHV-SSGHYKFETP   51 (116)
Q Consensus        15 ~Htgekp~~C~~--C~k~F~~~~~l~~H~-~~~h~~~~~~   51 (116)
                      .++|+|||.|..  |+++|.+.++|..|+ ++ |++..+.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rri-HTgEKP~   59 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAV-HKSDLPA   59 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHH-SSSCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhh-CCCCCCc
Confidence            478999999975  999999999999997 68 9997665

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.63  E-value=1.1e-08  Score=61.83  Aligned_cols=47  Identities=23%  Similarity=0.429  Sum_probs=42.4

Q ss_pred             CCcCCchhhhhhccccCCC--cceeccccchhccCchhhHHHhH-hccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN--GPYTCPKCNQAFAKSQIYAAHVS-SGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge--kp~~C~~C~k~F~~~~~l~~H~~-~~h~~~   48 (116)
                      +.|.....|..|+++|+++  +||.|..|++.|.....|..|++ + |.+.
T Consensus        43 ~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~-H~~~   92 (95)
T 2yt9_A           43 LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV-HSGP   92 (95)
T ss_dssp             CEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHT-SCCC
T ss_pred             CccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHh-cCCC
Confidence            4578889999999999997  99999999999999999999986 6 8764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.3e-08  Score=62.54  Aligned_cols=39  Identities=13%  Similarity=0.321  Sum_probs=36.5

Q ss_pred             CchhhhhhccccCCCcceeccccchhccCchhhHHHhHh
Q 044362            5 AKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         5 ~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ..+.|..|+++|++++||.|..|++.|.....|..|+++
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH
Confidence            456799999999999999999999999999999999986

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.62  E-value=1.4e-08  Score=64.22  Aligned_cols=46  Identities=22%  Similarity=0.330  Sum_probs=29.7

Q ss_pred             CcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .|.....|..|+++|++++||.|..  |++.|.....|..|+++ |++.
T Consensus        43 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~   90 (124)
T 1ubd_C           43 AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-HTGD   90 (124)
T ss_dssp             EESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHH-HHCC
T ss_pred             hhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHH-hCCC
Confidence            4556666666666666666666654  66666666666666666 5554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.62  E-value=1.1e-08  Score=62.27  Aligned_cols=46  Identities=24%  Similarity=0.431  Sum_probs=42.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++
T Consensus        55 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~~  100 (100)
T 2ebt_A           55 WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR-HQN  100 (100)
T ss_dssp             CEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHH-HCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHH-hCC
Confidence            3578888999999999999999999999999999999999999 764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.62  E-value=5.3e-09  Score=62.40  Aligned_cols=45  Identities=29%  Similarity=0.544  Sum_probs=41.4

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |+
T Consensus        45 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~   89 (89)
T 2wbs_A           45 WKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR-HF   89 (89)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGG-GC
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHh-hC
Confidence            3577888999999999999999999999999999999999998 64

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.61  E-value=6.2e-09  Score=65.84  Aligned_cols=48  Identities=35%  Similarity=0.651  Sum_probs=41.8

Q ss_pred             CCcCCchhhhhhccccCCCcceecc--ccchhccCchhhHHHhHhccCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKFE   49 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~   49 (116)
                      +.|.....|..|+++|++++||.|+  .|++.|.....|..|+++ |++..
T Consensus        72 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~~k  121 (124)
T 1ubd_C           72 KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HAKAK  121 (124)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHH-HC---
T ss_pred             CccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHH-Hcccc
Confidence            4678889999999999999999996  599999999999999999 88754

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.60  E-value=5.5e-09  Score=59.27  Aligned_cols=49  Identities=12%  Similarity=0.218  Sum_probs=40.5

Q ss_pred             hhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCC
Q 044362            9 GRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTL   68 (116)
Q Consensus         9 L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~   68 (116)
                      |..|+++|+|++||.|+.|++.|.....|.   ++ |++..+       |.|.++.+.+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~-H~~~k~-------~~C~~C~k~f~   50 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LF-DPMTGT-------FRCTFCHTEVE   50 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HE-ETTTTE-------EBCSSSCCBCE
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hh-cCCCCC-------EECCCCCCccc
Confidence            678999999999999999999999988886   67 887543       67777776554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.60  E-value=5.3e-09  Score=68.65  Aligned_cols=44  Identities=23%  Similarity=0.408  Sum_probs=20.9

Q ss_pred             cCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCC
Q 044362            3 KKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         3 ~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |.....|..|+++|++++||.|.+  |++.|.....|..|+++ |++
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~  147 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV-HTS  147 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT-TTS
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH-hcC
Confidence            344444444444444444444443  44444444444444444 444

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.59  E-value=3.6e-09  Score=71.73  Aligned_cols=60  Identities=20%  Similarity=0.369  Sum_probs=40.5

Q ss_pred             CcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      .|.....|..|+++|++++||.|+.|++.|.....|..|+++ |++..+       |.|.++.+.+..
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~  145 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTGEKP-------YKCPECGKSFSR  145 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHH-HHCCCC-------EECTTTCCEESC
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH-hCCCCC-------eECCCCCcccCC
Confidence            466667777777777777777777777777777777777777 665443       455555554443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.59  E-value=1.1e-08  Score=63.05  Aligned_cols=46  Identities=17%  Similarity=0.252  Sum_probs=42.5

Q ss_pred             CCc-CCchhhhhhccccCCCcceeccccchhccCchhhHHH-hHhccCCC
Q 044362            1 KKK-KAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAH-VSSGHYKF   48 (116)
Q Consensus         1 k~~-~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H-~~~~h~~~   48 (116)
                      +.| ...+.|..|+++| +++||.|.+|++.|.....|..| +++ |++.
T Consensus        42 k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~-H~~~   89 (96)
T 2ctd_A           42 AVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMAN-HNSL   89 (96)
T ss_dssp             SCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHH-TCCC
T ss_pred             CCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHh-cCCC
Confidence            568 8899999999999 99999999999999999999999 888 8763

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.59  E-value=9.5e-09  Score=64.32  Aligned_cols=61  Identities=15%  Similarity=0.330  Sum_probs=50.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHh--hcCCCCCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAA--RYPKRNTLQ   69 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~--~~~~~~~~~   69 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+++ |++..+       |.|  ..+.+.+..
T Consensus        46 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           46 RRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT-HTGEKP-------FSCRWPSCQKKFAR  108 (119)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHTCCC-------EECCSTTCCCEESS
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHH-hcCCCC-------eeCCCCCCccccCC
Confidence            4688889999999999999999999999999999999999999 887654       455  455554443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.58  E-value=1.4e-08  Score=68.70  Aligned_cols=45  Identities=24%  Similarity=0.510  Sum_probs=31.6

Q ss_pred             CcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      .|...+.|..|+++|++++||.|+.  |++.|.....|..|+++ |++
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~~  161 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG  161 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS-SCS
T ss_pred             ccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH-hCC
Confidence            4666667777777777777777766  77777777777777776 665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.58  E-value=1.1e-08  Score=59.21  Aligned_cols=55  Identities=24%  Similarity=0.300  Sum_probs=44.9

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      .+.++|++++||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+.....+
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~-------~~C~~C~~~f~~~~~L   58 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGEKP-------YKCLECGKAFSQNSGL   58 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCSCC-------EECSSSCCEESSHHHH
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHh-cCCCCC-------eECCCCCcccCCHHHH
Confidence            457889999999999999999999999999999 887544       6777777666544333

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=2e-08  Score=50.88  Aligned_cols=34  Identities=24%  Similarity=0.465  Sum_probs=30.5

Q ss_pred             cCCCcceecc--ccchhccCchhhHHHhHhccCCCCC
Q 044362           16 HKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        16 Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      |+|++||.|.  .|++.|.....|..|+++ |++..+
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHK-HEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHH-HHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHH-hCCCCC
Confidence            6899999999  599999999999999999 887543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.57  E-value=1.3e-08  Score=66.60  Aligned_cols=46  Identities=24%  Similarity=0.370  Sum_probs=27.8

Q ss_pred             CcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .|.....|..|+++|++++||.|.+  |++.|.....|..|+++ |++.
T Consensus        48 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~   95 (155)
T 2gli_A           48 PFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGE   95 (155)
T ss_dssp             CCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHH-TTTC
T ss_pred             hhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHH-cCCC
Confidence            4555556666666666666666653  66666666666666666 5554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.56  E-value=2.5e-08  Score=65.15  Aligned_cols=62  Identities=23%  Similarity=0.387  Sum_probs=51.0

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc--cchhccCchhhHHHh-HhccCCCCChhHHHHHHHhhc--CCCCCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHV-SSGHYKFETPEQRAERLAARY--PKRNTLQP   70 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~-~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~   70 (116)
                      +.|.....|..|+++|++++||.|+.  |++.|.....|..|+ ++ |++..+       |.|.+  +.+.+...
T Consensus        77 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~-H~~~~~-------~~C~~~~C~~~f~~~  143 (155)
T 2gli_A           77 KSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT-HSNEKP-------YVCKLPGCTKRYTDP  143 (155)
T ss_dssp             CCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHT-TCSCCC-------EECCSTTTCCEESSH
T ss_pred             CcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHh-cCCCCC-------eeCCCCCCccccCCH
Confidence            46888999999999999999999998  999999999999998 67 887654       56666  66555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.56  E-value=2.6e-08  Score=50.41  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=30.0

Q ss_pred             ccCCCcceeccc--cchhccCchhhHHHhHhccCCC
Q 044362           15 PHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        15 ~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .|++++||.|.+  |++.|...+.|..|+++ |++.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRW-HTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHH-HHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCCC
Confidence            488999999985  99999999999999999 8764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.52  E-value=3.1e-08  Score=50.85  Aligned_cols=29  Identities=24%  Similarity=0.439  Sum_probs=26.4

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHh
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .++|++||.|..|+++|.+.++|..|+..
T Consensus         2 ~~~gekp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            2 SLLKPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CSSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCCccCeECCCCCCccCCHhHccCcCCe
Confidence            36899999999999999999999999854

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=7.9e-08  Score=52.71  Aligned_cols=46  Identities=15%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhH-hccCCCCChhHHHHHHHhhcCCCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVS-SGHYKFETPEQRAERLAARYPKRNT   67 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~-~~h~~~~~~~~~~~~~~~~~~~~~~   67 (116)
                      ..|++++||.|..|++.|.....|..|++ + |++..+       |.|.++.+.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~-H~~~k~-------~~C~~C~k~F   51 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQV-HTSERP-------HKCQVWVSGP   51 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHT-SCCCCC-------CCSSSSCCSS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHh-cCCCCC-------ccCCCCCCCC
Confidence            46899999999999999999999999997 8 887644       5666666544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=6e-08  Score=51.81  Aligned_cols=36  Identities=17%  Similarity=0.239  Sum_probs=32.3

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      ..|++++||.|..|++.|.....|..|+++ |++..+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~   40 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKP   40 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGG-SCSCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHh-cCCCCC
Confidence            357889999999999999999999999999 988654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=2.9e-08  Score=54.48  Aligned_cols=33  Identities=15%  Similarity=0.068  Sum_probs=30.1

Q ss_pred             CCcCCchhhhhhcc-ccCCCcceeccccchhccC
Q 044362            1 KKKKAKYDGRTHSL-PHKKNGPYTCPKCNQAFAK   33 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htgekp~~C~~C~k~F~~   33 (116)
                      +.|.....|..|++ +|++++||.|.+|++.|.+
T Consensus        20 k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           20 KGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             cccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            46888999999997 9999999999999999976

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=4.9e-08  Score=56.66  Aligned_cols=36  Identities=19%  Similarity=0.335  Sum_probs=32.4

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHhccCCCC
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFE   49 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~   49 (116)
                      ...|.+++||.|..|++.|....+|..|+++ |++..
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~-Htg~~   40 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQ-HGVTS   40 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHH-HTTTS
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhh-hCCCc
Confidence            3458899999999999999999999999999 98854

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=2.7e-08  Score=56.35  Aligned_cols=51  Identities=10%  Similarity=0.303  Sum_probs=39.2

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      +++|+|++||.|..|++.|.....|..|++.+|...+.+      |.|.++.+.+..
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~------~~C~~C~k~f~~   52 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV------YPCPFCFKEFTR   52 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC------EECTTTCCEESC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC------eECCCCCCccCC
Confidence            468999999999999999999999999998735223333      677777665543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=1e-07  Score=58.06  Aligned_cols=37  Identities=19%  Similarity=0.447  Sum_probs=33.0

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .|.++|++++||.|..|++.|.....|..|+++ |++.
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~-Ht~e   51 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNI-HNEE   51 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHH-HHHH
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHH-hCCC
Confidence            345679999999999999999999999999999 8763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.46  E-value=6e-08  Score=47.86  Aligned_cols=31  Identities=23%  Similarity=0.579  Sum_probs=28.0

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      +||.|..|++.|.....|..|+++ |++..+.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITL-HELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHH-HTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHH-hCCCCCC
Confidence            589999999999999999999999 9886543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=7.6e-08  Score=45.21  Aligned_cols=28  Identities=25%  Similarity=0.586  Sum_probs=25.7

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      ++||.|..|++.|.....|..|+++ |++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRV-HTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTT-SCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHh-cCC
Confidence            5799999999999999999999998 764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.7e-08  Score=59.12  Aligned_cols=52  Identities=10%  Similarity=0.155  Sum_probs=41.3

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCC--CChhHHHHHHHhhcCCCCCCCceec
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF--ETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      +|+|++||.|..|++.|.....|..|+++ |++.  +.+      |.|.++.+.+.....+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~------~~C~~C~k~f~~~~~L   54 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRK-HAETVAALR------FPCEFCGKRFEKPDSV   54 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHH-HHHHTTTCC------EECTTTCCEESSHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHH-hhccCCCcc------cCCCCCCchhCCHHHH
Confidence            48999999999999999999999999999 8752  233      7777777666654333

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.44  E-value=4e-08  Score=61.75  Aligned_cols=65  Identities=18%  Similarity=0.362  Sum_probs=47.3

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhc--cCCCCChhHHHHHHHhhcCCCCCCCcee
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSG--HYKFETPEQRAERLAARYPKRNTLQPVD   72 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~--h~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (116)
                      +.|.....|..|+++|++++||.|..|++.|.....|..|+..+  |.+. .+      +.|.++.+.+.....
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~-~~------~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A           15 KKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE-QV------FTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCC-CC------EECSSSCCEESSHHH
T ss_pred             CcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCC-CC------eECCCCCCccCCHHH
Confidence            46778888889988888888999999999999988999998862  2222 22      566666665554433

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.44  E-value=3.2e-08  Score=63.16  Aligned_cols=45  Identities=16%  Similarity=0.264  Sum_probs=41.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|...+.|..|+++|  ++||.|..|++.|.....|..|+++ |++.
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~-h~~~  126 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK-KHNI  126 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHH-TTCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHH-HCCc
Confidence            4688899999999999  8999999999999999999999999 8775

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=8.8e-08  Score=44.72  Aligned_cols=27  Identities=22%  Similarity=0.511  Sum_probs=24.9

Q ss_pred             CcceeccccchhccCchhhHHHhHhccC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      ++||.|..|++.|.....|..|+++ |+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~-H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRT-HG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHH-CC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHH-cc
Confidence            5799999999999999999999998 64

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=1.2e-07  Score=44.87  Aligned_cols=29  Identities=24%  Similarity=0.545  Sum_probs=26.6

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ++||.|..|++.|.....|..|+++ |++.
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~-h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLET-HDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHT-TCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHH-hccC
Confidence            4799999999999999999999999 8764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=7.5e-08  Score=45.17  Aligned_cols=27  Identities=30%  Similarity=0.666  Sum_probs=24.8

Q ss_pred             CcceeccccchhccCchhhHHHhHhccC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      ++||.|..|++.|.....|..|+++ |+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRG-HS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTT-CC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHh-cC
Confidence            4799999999999999999999998 64

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.36  E-value=1.8e-07  Score=44.02  Aligned_cols=28  Identities=25%  Similarity=0.571  Sum_probs=25.8

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|..|++.|.....|..|+++ |++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILL-HENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTG-GGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHH-hcCC
Confidence            589999999999999999999999 8764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=9.2e-08  Score=51.05  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccch
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQ   29 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k   29 (116)
                      +.|...+.|..|+++|++++||.|.+|++
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           20 KIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             EEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            46888999999999999999999999985

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.34  E-value=9.6e-08  Score=54.74  Aligned_cols=51  Identities=18%  Similarity=0.307  Sum_probs=41.8

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      +|++++||.|..|++.|.....|..|+++ |++...       |.|.++.+.+.....+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~-------~~C~~C~~~f~~~~~L   53 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERI-HCTDRP-------FKCNYCSFDTKQPSNL   53 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSCS-------EECSSSSCEESSHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCC-------EeCCCCCCccCCHHHH
Confidence            58899999999999999999999999999 887644       6777777666544433

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.32  E-value=1.4e-07  Score=63.71  Aligned_cols=45  Identities=18%  Similarity=0.421  Sum_probs=23.0

Q ss_pred             CcCCchhhhhhccccCCCcceec--cccchhccCchhhHHHhHhccCC
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTC--PKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C--~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      .|.....|..|+++|++++||.|  ..|++.|.....|..|+++ |.+
T Consensus        23 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~   69 (190)
T 1tf6_A           23 AYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTG   69 (190)
T ss_dssp             BCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTT-TTT
T ss_pred             hhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHH-ccC
Confidence            34444455555555555555555  4455555555555555555 444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=3.4e-07  Score=44.26  Aligned_cols=29  Identities=31%  Similarity=0.700  Sum_probs=26.5

Q ss_pred             Ccceecc--ccchhccCchhhHHHhHhccCCC
Q 044362           19 NGPYTCP--KCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        19 ekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ++||.|.  .|++.|.....|..|+++ |++.
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKS-HQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGG-GTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHH-ccCC
Confidence            4799999  899999999999999999 8864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.30  E-value=4.8e-08  Score=47.84  Aligned_cols=30  Identities=20%  Similarity=0.621  Sum_probs=27.1

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      +||.|..|++.|...++|..|+++ |++..+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKT-AFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTS-SSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH-HccCCC
Confidence            589999999999999999999999 987643

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.30  E-value=2.7e-07  Score=43.35  Aligned_cols=28  Identities=29%  Similarity=0.577  Sum_probs=25.7

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|..|++.|.....|..|+++ |++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRS-HTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHH-HSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH-hcCC
Confidence            589999999999999999999999 8763

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.29  E-value=1.8e-07  Score=56.69  Aligned_cols=55  Identities=13%  Similarity=0.156  Sum_probs=44.4

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceecC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDTS   74 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (116)
                      .+.++.+.++|.|++|++.|.....|..|+++ |++..+       |.|.+|.+.+.....+.
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~-H~~~k~-------~~C~~C~k~F~~~~~L~   73 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRL-LHAAQV-------FPCKYCPATFYSSPGLT   73 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHT-TSCSSS-------EECTTSSCEESSHHHHH
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhh-ccCCCc-------cCCCCCCCEeCCHHHHH
Confidence            34567788999999999999999999999999 988654       77888877766544443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.29  E-value=3.2e-07  Score=43.27  Aligned_cols=29  Identities=24%  Similarity=0.399  Sum_probs=26.0

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFE   49 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~   49 (116)
                      +||.|..|++.|.....|..|+++ |++.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKT-KHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH-HTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHH-HccCC
Confidence            589999999999999999999999 77643

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=2.3e-07  Score=43.48  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=25.5

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|..|++.|.....|..|+++ |++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI-HIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH-HHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH-hccC
Confidence            589999999999999999999999 7763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.60  E-value=1e-07  Score=45.26  Aligned_cols=29  Identities=31%  Similarity=0.567  Sum_probs=26.2

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ++||.|..|++.|.....|..|+++ |++.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRI-HTGE   29 (30)
Confidence            4799999999999999999999999 8763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=2.9e-07  Score=43.15  Aligned_cols=28  Identities=29%  Similarity=0.587  Sum_probs=25.6

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|..|++.|.....|..|+++ |++.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRI-HSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHH-HHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHH-hcCC
Confidence            589999999999999999999999 8763

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.25  E-value=1.2e-07  Score=55.34  Aligned_cols=32  Identities=19%  Similarity=0.187  Sum_probs=29.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhcc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFA   32 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~   32 (116)
                      +.|.....|..|+++|++++||.|..|++.|.
T Consensus        48 k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           48 KSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            46888999999999999999999999999884

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.3e-07  Score=44.72  Aligned_cols=28  Identities=32%  Similarity=0.581  Sum_probs=25.5

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|..|++.|.....|..|+++ |++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQ-HTGE   28 (29)
Confidence            589999999999999999999999 8763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.24  E-value=4.5e-07  Score=43.54  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=25.7

Q ss_pred             cceecc--ccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCP--KCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~--~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|.  .|++.|.....|..|+++ |++.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~-H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHH-hcCC
Confidence            589998  899999999999999999 8874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.23  E-value=4.4e-07  Score=41.98  Aligned_cols=26  Identities=23%  Similarity=0.617  Sum_probs=23.6

Q ss_pred             ceeccccchhccCchhhHHHhHhccCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      ||.|..|++.|.....|..|+++ |++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~-h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRV-HKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGG-TCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHH-cCC
Confidence            68999999999999999999999 875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.54  E-value=1.5e-07  Score=43.53  Aligned_cols=25  Identities=36%  Similarity=0.889  Sum_probs=23.4

Q ss_pred             cceeccccchhccCchhhHHHhHhcc
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGH   45 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h   45 (116)
                      +||.|..|++.|.....|..|+++ |
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~-H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH-H   25 (26)
Confidence            589999999999999999999988 6

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.22  E-value=9.3e-08  Score=59.12  Aligned_cols=59  Identities=17%  Similarity=0.267  Sum_probs=39.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      +.|.....|..|+++|  .+||.|..|++.|.....|..|+ . |++..+       |.|.++.+.+...
T Consensus        24 ~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~-------~~C~~C~~~f~~~   82 (107)
T 1wjp_A           24 AKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKK-------LTCLECMRTFKSS   82 (107)
T ss_dssp             CBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGG-------GEEGGGTEECSSH
T ss_pred             CccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCC-------ccCccccchhCCH
Confidence            3566777777777777  36777777877777777777777 4 655432       5666666555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=6e-07  Score=42.48  Aligned_cols=28  Identities=29%  Similarity=0.592  Sum_probs=25.2

Q ss_pred             cceeccccchhccCchhhHHH-hHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAH-VSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H-~~~~h~~~   48 (116)
                      +||.|..|++.|.....|..| +++ |++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~-H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKI-HSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTT-SCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHH-ccCC
Confidence            589999999999999999999 788 8764

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=8.6e-07  Score=46.49  Aligned_cols=27  Identities=15%  Similarity=-0.049  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|++|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           20 KVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=4.9e-07  Score=51.56  Aligned_cols=35  Identities=14%  Similarity=0.280  Sum_probs=31.1

Q ss_pred             CchhhhhhccccCCCcceeccccchhccCchhhHH
Q 044362            5 AKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAA   39 (116)
Q Consensus         5 ~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~   39 (116)
                      ..+.|..|+++|++++||.|..|++.|.....|..
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~   36 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR   36 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc
Confidence            45679999999999999999999999998888765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.13  E-value=4.7e-07  Score=52.32  Aligned_cols=50  Identities=20%  Similarity=0.335  Sum_probs=40.2

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      ...+++++||.|..|++.|.....|..|+++ |++...       |.|.++.+.+...
T Consensus         9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~-------~~C~~C~k~f~~~   58 (74)
T 2lce_A            9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTV-HTGEKP-------YRCNICGAQFNRP   58 (74)
T ss_dssp             --CCCCCCSBCCTTSSCCBSCHHHHHHHHHH-HCCCCS-------EECTTTCCEESCH
T ss_pred             ccccCCCCCeECCCCCceeCCHHHHHHHHHH-cCCCCC-------EECCCCCchhCCH
Confidence            3467899999999999999999999999999 887654       6777777665543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.13  E-value=3.9e-07  Score=49.84  Aligned_cols=43  Identities=12%  Similarity=0.265  Sum_probs=32.2

Q ss_pred             CCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCC
Q 044362           18 KNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTL   68 (116)
Q Consensus        18 gekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~   68 (116)
                      |++||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~   43 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRT-HTGEKP-------YKCEFCEYAAA   43 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHH-HHCCCC-------EECSSSSCEES
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHH-cCCCCC-------cCCCCCcchhC
Confidence            57899999999999999999999999 887654       56666665444

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.12  E-value=4.8e-07  Score=52.68  Aligned_cols=56  Identities=14%  Similarity=0.271  Sum_probs=44.4

Q ss_pred             hhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCceec
Q 044362           10 RTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQPVDT   73 (116)
Q Consensus        10 ~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (116)
                      ..+...+.+++||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+.....+
T Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~~~~L   62 (77)
T 2cot_A            7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGEKP-------YKCDECGKAFIQRSHL   62 (77)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCSCS-------EECSSSCCEESSHHHH
T ss_pred             CCCcCcCCCCCCEECCCCCcccCCHHHHHHHHHH-cCCCcC-------eeCCCCCCccCCHHHH
Confidence            4455678899999999999999999999999999 887543       6777777666544333

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=1.2e-06  Score=45.95  Aligned_cols=27  Identities=15%  Similarity=-0.071  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           20 MCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            578999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.10  E-value=8.9e-07  Score=46.37  Aligned_cols=27  Identities=19%  Similarity=0.007  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           20 KTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.1e-06  Score=46.06  Aligned_cols=27  Identities=15%  Similarity=0.079  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           20 KSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.2e-06  Score=45.95  Aligned_cols=27  Identities=11%  Similarity=-0.025  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           20 KGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             chhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.1e-06  Score=46.03  Aligned_cols=27  Identities=15%  Similarity=0.015  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           20 KAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             ceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.1e-06  Score=46.10  Aligned_cols=27  Identities=19%  Similarity=-0.009  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           20 KAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             hhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578999999999999999999999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.07  E-value=1.5e-06  Score=40.62  Aligned_cols=27  Identities=22%  Similarity=0.486  Sum_probs=24.7

Q ss_pred             cceecc--ccchhccCchhhHHHhHhccCC
Q 044362           20 GPYTCP--KCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        20 kp~~C~--~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +||.|.  .|++.|.....|..|+++ |++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~-H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKI-HTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGG-GTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHH-hCC
Confidence            589999  999999999999999999 764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.07  E-value=8e-07  Score=52.03  Aligned_cols=40  Identities=25%  Similarity=0.388  Sum_probs=37.4

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc---cchhccCchhhHHHhHh
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK---CNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~---C~k~F~~~~~l~~H~~~   43 (116)
                      +.|.....|..|+++|++   |.|..   |++.|.....|..|+++
T Consensus        41 ~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           41 KRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             CEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            468888999999999999   99999   99999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=1.3e-06  Score=45.75  Aligned_cols=27  Identities=15%  Similarity=-0.016  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           20 KSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=1.1e-06  Score=46.15  Aligned_cols=27  Identities=22%  Similarity=0.134  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      |.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           20 KGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=1.5e-06  Score=45.50  Aligned_cols=27  Identities=15%  Similarity=-0.009  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           20 KAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=1.2e-06  Score=45.95  Aligned_cols=27  Identities=19%  Similarity=0.020  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           20 KAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=1.1e-06  Score=46.10  Aligned_cols=27  Identities=19%  Similarity=0.086  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|.+|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           20 KVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=1.1e-06  Score=46.09  Aligned_cols=27  Identities=15%  Similarity=-0.027  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           20 KVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             chhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.1e-06  Score=46.11  Aligned_cols=27  Identities=15%  Similarity=0.015  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           20 RGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.04  E-value=1.1e-06  Score=46.08  Aligned_cols=27  Identities=19%  Similarity=0.090  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           20 KSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=9.8e-07  Score=46.21  Aligned_cols=27  Identities=15%  Similarity=-0.047  Sum_probs=24.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           20 KVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             EECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             hhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            468899999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.03  E-value=1.1e-06  Score=46.07  Aligned_cols=27  Identities=15%  Similarity=0.014  Sum_probs=25.3

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           20 KGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=1.1e-06  Score=46.05  Aligned_cols=27  Identities=19%  Similarity=0.063  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|+|++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           20 KSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            468899999999999999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.03  E-value=6.5e-07  Score=46.82  Aligned_cols=28  Identities=18%  Similarity=0.057  Sum_probs=25.8

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCN   28 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~   28 (116)
                      +.|...+.|..|+++|++++||.|+.||
T Consensus        18 k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A           18 LRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             EECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4688899999999999999999999996

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=1.3e-06  Score=45.81  Aligned_cols=27  Identities=15%  Similarity=-0.002  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|.+|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           20 KSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             cccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=1.1e-06  Score=45.94  Aligned_cols=27  Identities=15%  Similarity=-0.086  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           20 KSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             BCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=1.3e-06  Score=45.75  Aligned_cols=27  Identities=15%  Similarity=-0.171  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           20 KNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568889999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=1.3e-06  Score=45.78  Aligned_cols=27  Identities=15%  Similarity=0.025  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           20 KAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            568899999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=1.2e-06  Score=45.85  Aligned_cols=27  Identities=19%  Similarity=0.108  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           20 KSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.01  E-value=1.3e-06  Score=45.78  Aligned_cols=27  Identities=15%  Similarity=-0.007  Sum_probs=24.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           20 KVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             chhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.00  E-value=1.6e-06  Score=45.33  Aligned_cols=27  Identities=15%  Similarity=-0.070  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           20 KSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             cccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.99  E-value=1.2e-06  Score=46.01  Aligned_cols=27  Identities=15%  Similarity=-0.020  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           20 KAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=1e-06  Score=46.17  Aligned_cols=27  Identities=15%  Similarity=-0.022  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           20 KAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=1.7e-06  Score=45.21  Aligned_cols=27  Identities=15%  Similarity=-0.029  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           20 KAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             hhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            468889999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=1.3e-06  Score=45.73  Aligned_cols=27  Identities=15%  Similarity=0.052  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           20 KGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=1.8e-06  Score=45.46  Aligned_cols=27  Identities=11%  Similarity=-0.043  Sum_probs=24.8

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        22 k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           22 WRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            468889999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=1.4e-06  Score=45.67  Aligned_cols=27  Identities=19%  Similarity=0.178  Sum_probs=24.8

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|.+|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           20 KGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             EEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            468889999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=1.1e-06  Score=46.09  Aligned_cols=27  Identities=15%  Similarity=-0.047  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           20 KVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            568899999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=1.6e-06  Score=45.30  Aligned_cols=27  Identities=15%  Similarity=-0.130  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|+|++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           20 KAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=9.8e-07  Score=46.34  Aligned_cols=27  Identities=19%  Similarity=0.221  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           20 KSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=1.2e-06  Score=45.95  Aligned_cols=27  Identities=15%  Similarity=-0.018  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           20 KVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             chhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=1.1e-06  Score=46.08  Aligned_cols=27  Identities=15%  Similarity=-0.054  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           20 KSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             hhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=1.7e-06  Score=45.34  Aligned_cols=27  Identities=15%  Similarity=0.089  Sum_probs=24.8

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           20 KRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             EEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            468889999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=1.2e-06  Score=45.87  Aligned_cols=27  Identities=22%  Similarity=0.175  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           20 KAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             cccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=1.2e-06  Score=46.11  Aligned_cols=27  Identities=15%  Similarity=0.023  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           20 KAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             BCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=1.3e-06  Score=45.39  Aligned_cols=27  Identities=19%  Similarity=0.050  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        18 k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A           18 KAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568899999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=1.8e-06  Score=45.18  Aligned_cols=27  Identities=19%  Similarity=-0.066  Sum_probs=25.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           20 KSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             hhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=1.4e-06  Score=45.66  Aligned_cols=27  Identities=7%  Similarity=-0.207  Sum_probs=24.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           20 EIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             hhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            568889999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=1.1e-06  Score=46.11  Aligned_cols=27  Identities=19%  Similarity=0.005  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           20 KGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             chhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            568899999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=3.1e-06  Score=44.33  Aligned_cols=27  Identities=15%  Similarity=-0.098  Sum_probs=25.1

Q ss_pred             CCcCCchhhhhhcc-ccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSL-PHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|++ +|++++||.|..|
T Consensus        20 k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           20 KAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             chhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            57899999999999 9999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=1.1e-06  Score=46.06  Aligned_cols=27  Identities=19%  Similarity=0.055  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|+|++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           20 KAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.92  E-value=2.8e-06  Score=48.68  Aligned_cols=53  Identities=25%  Similarity=0.436  Sum_probs=40.6

Q ss_pred             hhhh-ccccCCCcceecc--ccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362            9 GRTH-SLPHKKNGPYTCP--KCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus         9 L~~H-~r~Htgekp~~C~--~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      |..| ..+|++++||.|+  .|++.|.....|..|+++ |.+..+       |.|.++.+.+..
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~   61 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI-HTGQKP-------FQCRICMRNFSR   61 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH-HHCCCC-------EECTTTCCEESC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHh-hCCCCC-------eECCCCCchhCC
Confidence            4444 4578999999997  599999999999999999 887654       567776665543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.92  E-value=1.8e-06  Score=45.21  Aligned_cols=27  Identities=19%  Similarity=0.070  Sum_probs=24.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|++|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           20 KAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             hhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            468899999999999999999999986

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.92  E-value=2.7e-06  Score=44.52  Aligned_cols=27  Identities=19%  Similarity=0.046  Sum_probs=24.6

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|++|
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           20 KAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999999999875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.92  E-value=1.1e-06  Score=46.05  Aligned_cols=27  Identities=19%  Similarity=0.031  Sum_probs=24.8

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|..|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           20 KTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             EEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            468889999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=1.2e-06  Score=45.95  Aligned_cols=27  Identities=15%  Similarity=0.026  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|++|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           20 KAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             chhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            568899999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.90  E-value=2.8e-06  Score=53.06  Aligned_cols=53  Identities=17%  Similarity=0.229  Sum_probs=39.7

Q ss_pred             ccccCCCcceeccccchhccCchhhHHHhH-hccCC--CCChhHHHHHHHhhcCCCCCCCcee
Q 044362           13 SLPHKKNGPYTCPKCNQAFAKSQIYAAHVS-SGHYK--FETPEQRAERLAARYPKRNTLQPVD   72 (116)
Q Consensus        13 ~r~Htgekp~~C~~C~k~F~~~~~l~~H~~-~~h~~--~~~~~~~~~~~~~~~~~~~~~~~~~   72 (116)
                      +...+|++||.|..|++.|.....|..|++ + |++  .+.+      |.|.+|.+.+.....
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~-H~~~~~ekp------f~C~~Cgk~F~~~~~   65 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSE-HPNVVLNSS------YVCVECNFLTKRYDA   65 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHH-CSSCCCSCC------EEETTTTEEESSTHH
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhh-CCCCCCCCC------cCCCCCCcccCCHHH
Confidence            345689999999999999999999999997 6 853  1333      677777665554333

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=97.89  E-value=3.8e-06  Score=46.29  Aligned_cols=42  Identities=21%  Similarity=0.395  Sum_probs=34.4

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      +||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~   42 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEKP-------YPCGLCNRAFTR   42 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TTSSCS-------EECTTTCCEESS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHH-hCCCCC-------ccCCCCCCccCC
Confidence            589999999999999999999999 887644       566666665543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.87  E-value=1.6e-06  Score=45.50  Aligned_cols=27  Identities=11%  Similarity=-0.119  Sum_probs=25.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           20 KNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             cccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            568899999999999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=1.1e-06  Score=51.66  Aligned_cols=50  Identities=12%  Similarity=0.046  Sum_probs=39.1

Q ss_pred             chhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCC
Q 044362            6 KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKR   65 (116)
Q Consensus         6 ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~   65 (116)
                      ++.|..|+++|.+++||.|..|++.|. ...|..|+ . |.+..+       +.|..+.+
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~-~c~~~~-------~~C~~C~~   51 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-D-YCGART-------ELCGNCGR   51 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-H-HHHHCE-------EECSSSCC
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-h-HcCCCc-------eEcccCCC
Confidence            457889999999999999999999994 88999998 6 655433       45555554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.77  E-value=1.7e-06  Score=49.27  Aligned_cols=31  Identities=13%  Similarity=0.196  Sum_probs=28.4

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCCCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      ++||.|..|++.|.....|..|+++ |++..+
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~-H~~~~~   67 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGN-ESGKKT   67 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSC-CCCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHh-hcCCCC
Confidence            7899999999999999999999999 887654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=4e-06  Score=43.88  Aligned_cols=27  Identities=15%  Similarity=0.038  Sum_probs=24.5

Q ss_pred             CCcCCchhhhhhccccCCCcceecccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKC   27 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C   27 (116)
                      +.|...+.|..|+++|++++||.|+.|
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           20 KAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            468889999999999999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=97.71  E-value=6e-06  Score=44.90  Aligned_cols=41  Identities=17%  Similarity=0.388  Sum_probs=33.6

Q ss_pred             ceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQ   69 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~   69 (116)
                      ||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-------~~C~~C~~~f~~   41 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRT-HTDVRP-------YHCTYCNFSFKT   41 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH-TSSCCC-------EECSSSSCEESS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHh-cCCCCC-------ccCCCCCchhcC
Confidence            79999999999999999999999 888654       566666655543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.70  E-value=3.8e-06  Score=47.19  Aligned_cols=35  Identities=11%  Similarity=0.232  Sum_probs=27.8

Q ss_pred             CcCCchhhhhhccccCCCcceeccccchhccCchhhHH
Q 044362            2 KKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAA   39 (116)
Q Consensus         2 ~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~   39 (116)
                      .|...+.|.   ++|+|++||.|..|++.|....++..
T Consensus        23 ~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A           23 TFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             EEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            455555565   78999999999999999998876643

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.69  E-value=1.5e-05  Score=41.53  Aligned_cols=26  Identities=15%  Similarity=0.027  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           20 KAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.69  E-value=1.3e-05  Score=41.71  Aligned_cols=26  Identities=15%  Similarity=-0.044  Sum_probs=23.8

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A           20 KVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             cccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            57899999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.68  E-value=1.4e-05  Score=41.69  Aligned_cols=26  Identities=19%  Similarity=0.107  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A           20 KEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.68  E-value=1.3e-05  Score=41.74  Aligned_cols=26  Identities=19%  Similarity=0.028  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A           20 KVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.68  E-value=1.9e-05  Score=41.13  Aligned_cols=26  Identities=15%  Similarity=0.029  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A           20 KAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999963

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.68  E-value=1.4e-05  Score=41.74  Aligned_cols=26  Identities=15%  Similarity=0.045  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A           20 KAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             cccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            57899999999999999999999974

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.67  E-value=5.7e-06  Score=49.16  Aligned_cols=44  Identities=20%  Similarity=0.424  Sum_probs=35.8

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      ++||.|..|++.|.....|..|+++ |++..+       |.|.++.+.+...
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~-------~~C~~C~k~f~~~   44 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRT-HTGEKP-------FACDICGRKFARS   44 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH-HHCCCC-------EECTTTCCEESSH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHH-cCCCCC-------ccCCCCCCccCCH
Confidence            5899999999999999999999999 887544       5666666655543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.66  E-value=1.4e-05  Score=41.60  Aligned_cols=26  Identities=15%  Similarity=-0.026  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           20 KVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             cccCChhHHHHHhHhcCCCCCCCCCC
Confidence            57899999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.65  E-value=1.6e-05  Score=41.31  Aligned_cols=26  Identities=19%  Similarity=0.074  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A           20 KSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.65  E-value=1.4e-05  Score=41.55  Aligned_cols=26  Identities=19%  Similarity=0.040  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           20 KSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             hhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            56889999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.64  E-value=1.3e-05  Score=41.85  Aligned_cols=26  Identities=19%  Similarity=0.010  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A           20 KAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.63  E-value=1.8e-05  Score=41.25  Aligned_cols=26  Identities=15%  Similarity=0.111  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A           20 KRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57889999999999999999999964

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.63  E-value=9.8e-06  Score=41.83  Aligned_cols=26  Identities=8%  Similarity=0.041  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        18 k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A           18 CRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57889999999999999999999963

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=1.3e-05  Score=41.75  Aligned_cols=26  Identities=19%  Similarity=0.111  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           20 KAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=1.2e-05  Score=41.83  Aligned_cols=26  Identities=23%  Similarity=0.063  Sum_probs=23.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      |.|.....|..|+++|++++||.|++
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A           20 KSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             EEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CccCChHHHHHHHHHhCCCCCCCCCC
Confidence            46888999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.59  E-value=2.2e-05  Score=40.35  Aligned_cols=25  Identities=16%  Similarity=0.021  Sum_probs=22.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           20 KAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5788999999999999999999984

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.59  E-value=2.1e-05  Score=40.90  Aligned_cols=26  Identities=23%  Similarity=0.202  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A           20 KAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             hhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999963

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.59  E-value=9e-06  Score=47.68  Aligned_cols=40  Identities=10%  Similarity=0.057  Sum_probs=35.9

Q ss_pred             chhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            6 KYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         6 ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .+.|..|+ .|.+++||.|+.|++.|.. ..|..|+.+ |.+.
T Consensus        29 ~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~-c~~~   68 (75)
T 2d9k_A           29 ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEV-CGRE   68 (75)
T ss_dssp             HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHH-BTTB
T ss_pred             HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHH-ccCC
Confidence            67899999 8999999999999999885 899999999 7774

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=1.7e-05  Score=41.19  Aligned_cols=26  Identities=19%  Similarity=0.075  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A           20 KAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999963

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=1.3e-05  Score=41.77  Aligned_cols=26  Identities=15%  Similarity=0.031  Sum_probs=23.7

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A           20 KTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.58  E-value=1.1e-05  Score=42.12  Aligned_cols=26  Identities=23%  Similarity=0.112  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           20 KAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56888999999999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.58  E-value=1.4e-05  Score=41.83  Aligned_cols=26  Identities=15%  Similarity=-0.069  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|.+
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           20 KFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999963

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.57  E-value=2.7e-05  Score=39.57  Aligned_cols=24  Identities=25%  Similarity=0.144  Sum_probs=22.3

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|++++||.|
T Consensus        19 k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A           19 KAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCC
Confidence            578899999999999999999987

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.56  E-value=2.1e-05  Score=39.95  Aligned_cols=24  Identities=25%  Similarity=0.216  Sum_probs=22.1

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|++++||.|
T Consensus        18 k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A           18 KSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468889999999999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.55  E-value=1.9e-05  Score=40.20  Aligned_cols=25  Identities=16%  Similarity=0.014  Sum_probs=22.7

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|+|++||.|+
T Consensus        18 k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A           18 KAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             hhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4688899999999999999999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.55  E-value=2e-05  Score=41.08  Aligned_cols=26  Identities=12%  Similarity=-0.129  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A           20 KTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999963

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.54  E-value=2.1e-05  Score=40.97  Aligned_cols=26  Identities=19%  Similarity=0.055  Sum_probs=23.4

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A           20 KAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             cccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            56888999999999999999999963

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.53  E-value=1.4e-05  Score=41.68  Aligned_cols=26  Identities=19%  Similarity=0.089  Sum_probs=23.6

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           20 KAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.52  E-value=1.9e-05  Score=51.01  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=29.3

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHh
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      +...|+|++||.|..|++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            45669999999999999999999999999986

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.52  E-value=1.4e-05  Score=41.60  Aligned_cols=26  Identities=19%  Similarity=0.158  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A           20 KAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46888999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.51  E-value=1.4e-05  Score=41.73  Aligned_cols=26  Identities=19%  Similarity=0.055  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           20 KSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56889999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.50  E-value=1.1e-05  Score=42.00  Aligned_cols=26  Identities=15%  Similarity=0.019  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|++
T Consensus        20 k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           20 KAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46888999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.50  E-value=2.1e-05  Score=40.59  Aligned_cols=25  Identities=12%  Similarity=-0.120  Sum_probs=22.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           20 KIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             cccCCHHHHHHHHHHHCCCCCCCCC
Confidence            5788999999999999999999984

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.48  E-value=3.2e-05  Score=39.39  Aligned_cols=24  Identities=17%  Similarity=0.199  Sum_probs=22.2

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|++++||.|
T Consensus        19 k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A           19 TRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CccCCHHHHHHHHHhcCCCCCCCC
Confidence            578899999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.46  E-value=2.7e-05  Score=40.10  Aligned_cols=25  Identities=8%  Similarity=-0.049  Sum_probs=22.6

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           20 ATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4688899999999999999999984

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.46  E-value=3.1e-05  Score=39.34  Aligned_cols=25  Identities=8%  Similarity=-0.089  Sum_probs=22.8

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|.
T Consensus        18 k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A           18 ETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999984

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.45  E-value=5.8e-05  Score=42.90  Aligned_cols=39  Identities=18%  Similarity=0.334  Sum_probs=33.5

Q ss_pred             hhccccCCCcceeccc--cchhccCchhhHHHhHhccCCCCC
Q 044362           11 THSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKFET   50 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~~~   50 (116)
                      .....++..++|.|..  |++.|.....|..|+++ |++..+
T Consensus         7 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~~~   47 (72)
T 2epa_A            7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-HTGEKP   47 (72)
T ss_dssp             CCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHH-HSSSCS
T ss_pred             CCCCCccccCceeCCCCCCccccCCHHHHHHHHHh-cCCCCC
Confidence            3455678889999998  99999999999999999 887654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.45  E-value=2.3e-05  Score=40.27  Aligned_cols=25  Identities=16%  Similarity=0.056  Sum_probs=22.7

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           20 KAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             cccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4688899999999999999999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.43  E-value=3.2e-05  Score=40.16  Aligned_cols=26  Identities=19%  Similarity=0.105  Sum_probs=23.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A           20 KAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             EECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             hhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46888999999999999999999963

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.43  E-value=4e-05  Score=39.86  Aligned_cols=26  Identities=12%  Similarity=-0.074  Sum_probs=23.4

Q ss_pred             CCcCCchhhhhhccccCC-Ccceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKK-NGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htg-ekp~~C~~   26 (116)
                      +.|...+.|..|+++|++ ++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A           20 KTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            568899999999999999 99999963

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.41  E-value=3.5e-05  Score=39.61  Aligned_cols=25  Identities=16%  Similarity=-0.001  Sum_probs=22.6

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           20 KVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             EECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4688899999999999999999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.39  E-value=2.9e-05  Score=39.42  Aligned_cols=24  Identities=17%  Similarity=0.162  Sum_probs=22.1

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|++++||.|
T Consensus        19 k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A           19 KSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cccCCHHHHHHHhhhcCCCCCCCC
Confidence            568899999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.33  E-value=2.5e-05  Score=40.71  Aligned_cols=25  Identities=12%  Similarity=-0.065  Sum_probs=23.2

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A           20 KGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999996

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.33  E-value=2.6e-05  Score=40.60  Aligned_cols=25  Identities=16%  Similarity=-0.009  Sum_probs=23.0

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|+
T Consensus        20 k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A           20 KAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4688899999999999999999986

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.31  E-value=4.9e-05  Score=39.07  Aligned_cols=25  Identities=8%  Similarity=-0.016  Sum_probs=22.7

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|.
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A           20 RVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             chhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4688999999999999999999984

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=2.6e-05  Score=40.63  Aligned_cols=26  Identities=12%  Similarity=-0.123  Sum_probs=23.2

Q ss_pred             CCcCCchhhhhhccccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~   26 (116)
                      +.|...+.|..|+++|++++||.|+.
T Consensus        20 k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A           20 KAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             EEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             hhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46888999999999999999999973

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=3.2e-05  Score=39.33  Aligned_cols=24  Identities=25%  Similarity=0.260  Sum_probs=22.1

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|++++||.|
T Consensus        19 k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A           19 ARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             hhhCCHHHHHHHHHHcCCCCCCCC
Confidence            468889999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.24  E-value=3.9e-05  Score=39.46  Aligned_cols=25  Identities=12%  Similarity=0.061  Sum_probs=22.4

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|.
T Consensus        20 k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A           20 KAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             EEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4688999999999999999999884

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.17  E-value=0.0001  Score=43.17  Aligned_cols=26  Identities=15%  Similarity=0.029  Sum_probs=23.5

Q ss_pred             CCcCCchhhhhhc-cccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHS-LPHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~-r~Htgekp~~C~~   26 (116)
                      |+|...++|..|+ ++|++++||.|..
T Consensus        37 KaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           37 AAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             hhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            6799999999997 7999999999965

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=4.2e-05  Score=39.73  Aligned_cols=25  Identities=12%  Similarity=-0.002  Sum_probs=22.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.|.
T Consensus        20 k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           20 MNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             hhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4688999999999999999999986

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.07  E-value=0.00011  Score=35.50  Aligned_cols=24  Identities=17%  Similarity=-0.032  Sum_probs=21.4

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|+|++||.+
T Consensus        10 k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A           10 KRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             chhCCHHHHHHHHHHhCCCCCCCC
Confidence            578899999999999999999853

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.04  E-value=1.5e-05  Score=48.21  Aligned_cols=43  Identities=7%  Similarity=-0.042  Sum_probs=35.1

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|...+.|..|+++|++++||.|..|.    ....|..|.++ |.+.
T Consensus        33 k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~-~~~~   75 (88)
T 1x6f_A           33 SKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKY-ADGA   75 (88)
T ss_dssp             CEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCC-CCCS
T ss_pred             CEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcc-cccc
Confidence            4688889999999999999999997654    56667777777 7664

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=0.00024  Score=39.79  Aligned_cols=43  Identities=16%  Similarity=0.237  Sum_probs=32.8

Q ss_pred             cCCCcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhh-cCCCCCC
Q 044362           16 HKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAAR-YPKRNTL   68 (116)
Q Consensus        16 Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~-~~~~~~~   68 (116)
                      ..+++||.|..|++.|. ...|..|+++  ++. .+      |.|. .+.+.+.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~--~~~-~p------~~C~~~C~k~f~   48 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ--CPR-LP------VACPNQCGVGTV   48 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH--CSS-SE------EECTTCCSCCEE
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH--cCC-cC------ccCCcccCcccc
Confidence            56789999999999999 9999999986  333 22      6666 5655443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=0.00018  Score=36.98  Aligned_cols=24  Identities=17%  Similarity=-0.164  Sum_probs=21.9

Q ss_pred             CCcCCchhhhhhccccCCCcceec
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTC   24 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C   24 (116)
                      +.|...+.|..|+++|++++||.|
T Consensus        20 k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           20 KAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cccCchHHHHHHHhHhcCCCCCCC
Confidence            468889999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=96.94  E-value=0.00016  Score=36.09  Aligned_cols=25  Identities=8%  Similarity=0.010  Sum_probs=21.9

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      +.|...+.|..|+++|++++||.+.
T Consensus        14 k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A           14 REFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             CEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             cccCCHHHHHHHHHHcCCCccceec
Confidence            4688899999999999999999763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.88  E-value=0.00014  Score=34.83  Aligned_cols=23  Identities=9%  Similarity=-0.246  Sum_probs=20.0

Q ss_pred             CCcCCchhhhhhccccCCCccee
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYT   23 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~   23 (116)
                      |.|...+.|..|+++|++++||.
T Consensus        10 k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A           10 KRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             TTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             cccCCHHHHHHHHHHHccCCCCC
Confidence            46778889999999999999973

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.53  E-value=0.0013  Score=37.26  Aligned_cols=43  Identities=16%  Similarity=0.365  Sum_probs=36.6

Q ss_pred             CCcCCchhhhhhc-cccCCCc------ceecc--ccchhccCchhhHHHhHh
Q 044362            1 KKKKAKYDGRTHS-LPHKKNG------PYTCP--KCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus         1 k~~~~ks~L~~H~-r~Htgek------p~~C~--~C~k~F~~~~~l~~H~~~   43 (116)
                      +.|.+...|..|+ ..|.|.+      +|.|.  .|++.+.....|..|+++
T Consensus        11 ~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A           11 ESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            4688888999998 5798776      89997  599998888999999986

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.24  E-value=0.00047  Score=33.96  Aligned_cols=23  Identities=9%  Similarity=0.052  Sum_probs=20.3

Q ss_pred             CCcCCchhhhhhccccCCCccee
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYT   23 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~   23 (116)
                      +.|...+.|..|+++|++++||.
T Consensus        16 k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A           16 QRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CEESSHHHHHHHHHHHHTTTTTC
T ss_pred             cccCCHHHHHHHHHHhCCCCCCC
Confidence            46888999999999999999873

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=95.93  E-value=0.0012  Score=35.31  Aligned_cols=23  Identities=13%  Similarity=-0.029  Sum_probs=20.4

Q ss_pred             CCcCCchhhhhhccccCCCccee
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYT   23 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~   23 (116)
                      +.|...+.|..|+++|+|++||.
T Consensus        32 k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           32 AVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCHHHHHHHHHHhccCCCCC
Confidence            46888999999999999999974

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=95.81  E-value=0.0034  Score=29.17  Aligned_cols=20  Identities=15%  Similarity=0.132  Sum_probs=17.7

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|+|++
T Consensus        12 k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A           12 KRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCSSHHHHHHHHTTTSCCC
T ss_pred             cccCCHhHHHHHHHHhcCCC
Confidence            57889999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.54  E-value=0.0056  Score=28.51  Aligned_cols=20  Identities=20%  Similarity=0.134  Sum_probs=17.7

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|+|++
T Consensus        13 k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A           13 KAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCBSSSHHHHHHHGGGTCCC
T ss_pred             CccCCHHHHHHHHHHccCCC
Confidence            57889999999999999874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.38  E-value=0.0033  Score=29.91  Aligned_cols=21  Identities=19%  Similarity=0.041  Sum_probs=18.6

Q ss_pred             CCcCCchhhhhhccccCCCcc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGP   21 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp   21 (116)
                      +.|...+.|..|+++|++++|
T Consensus        15 k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A           15 KKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CEESSHHHHHHHHHHTSCTTC
T ss_pred             chhCCHHHHHHHHHHHcCCCC
Confidence            468889999999999999876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=95.33  E-value=0.0048  Score=29.41  Aligned_cols=21  Identities=14%  Similarity=0.012  Sum_probs=18.5

Q ss_pred             CCcCCchhhhhhccccCCCcc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGP   21 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp   21 (116)
                      +.|...+.|..|+++|++++|
T Consensus        15 k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A           15 SAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CEESSHHHHHHHHGGGTSCCC
T ss_pred             cccCCHHHHHHHHHHcCCCCC
Confidence            468889999999999999876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.08  E-value=0.0032  Score=30.48  Aligned_cols=21  Identities=10%  Similarity=-0.062  Sum_probs=18.6

Q ss_pred             CCcCCchhhhhhccccCCCcc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGP   21 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp   21 (116)
                      +.|...+.|..|+++|++++|
T Consensus        17 k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A           17 KSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             EECSSHHHHHHHHHHHCSSCC
T ss_pred             CccCCHHHHHHHHHHHcCCCC
Confidence            468889999999999999886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.98  E-value=0.015  Score=34.12  Aligned_cols=52  Identities=10%  Similarity=0.043  Sum_probs=33.3

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCCChh-HHHHHHHhhcCCCCCCCce
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPE-QRAERLAARYPKRNTLQPV   71 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~   71 (116)
                      ..|.|..|++.|.....|..|++++|.+..... .....+.|.++.+.+....
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~   76 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY   76 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHH
Confidence            347799999999999999999996466543210 0000045666666555433

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.93  E-value=0.0039  Score=31.59  Aligned_cols=19  Identities=21%  Similarity=0.162  Sum_probs=17.4

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |+|..++.|..|+++|+|+
T Consensus        19 k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A           19 YSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CEESCHHHHHHHHHHHSCC
T ss_pred             CccCCHHHHHHHHHhcCCC
Confidence            5799999999999999986

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=94.89  E-value=0.0081  Score=27.05  Aligned_cols=20  Identities=20%  Similarity=0.102  Sum_probs=17.3

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|+|++
T Consensus        10 k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A           10 KRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEESCSHHHHHHHTGGGSCC
T ss_pred             chhCCHHHHHHHHHHhcCCC
Confidence            46888999999999999874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=93.73  E-value=0.0054  Score=27.81  Aligned_cols=20  Identities=15%  Similarity=-0.017  Sum_probs=17.2

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|++++
T Consensus        10 k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A           10 KAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46888999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=94.65  E-value=0.0092  Score=26.88  Aligned_cols=21  Identities=10%  Similarity=0.048  Sum_probs=18.2

Q ss_pred             CCcCCchhhhhhccccCCCcc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGP   21 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp   21 (116)
                      +.|...+.|..|+++|++++|
T Consensus        10 k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A           10 FRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCHHHHHHHHHHHccCCC
Confidence            468889999999999998864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.56  E-value=0.013  Score=31.33  Aligned_cols=24  Identities=29%  Similarity=0.729  Sum_probs=22.6

Q ss_pred             cceeccccchhccCchhhHHHhHh
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .+|.|+.|+..|.....|..||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            579999999999999999999996

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=94.53  E-value=0.015  Score=25.69  Aligned_cols=19  Identities=21%  Similarity=0.106  Sum_probs=16.0

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      +.|...+.|..|+++|+++
T Consensus         9 k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            9 RSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSHHHHHHHGGGTCC-
T ss_pred             CcCCCHHHHHHHHHHcCCC
Confidence            5688899999999999874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.25  E-value=0.013  Score=28.02  Aligned_cols=20  Identities=30%  Similarity=0.316  Sum_probs=17.4

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|++++
T Consensus        17 k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A           17 RKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CEESSHHHHHHHHTTTSTTC
T ss_pred             CccCCHHHHHHHHHHhcCCC
Confidence            46888999999999999874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=94.23  E-value=0.0056  Score=29.82  Aligned_cols=20  Identities=20%  Similarity=-0.014  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |.|...+.|..|+++|+|++
T Consensus        18 k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A           18 KVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CEESCHHHHHHHHHHHHTTC
T ss_pred             CccCCHHHHHHHHHhcCCCC
Confidence            56889999999999999874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.92  E-value=0.013  Score=27.91  Aligned_cols=20  Identities=40%  Similarity=0.479  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|++++
T Consensus        17 k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A           17 KKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CBCSSHHHHHHHHHHHSSCC
T ss_pred             CCcCchHHHHHHHHHhcCCC
Confidence            57889999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.89  E-value=0.031  Score=25.13  Aligned_cols=20  Identities=15%  Similarity=-0.109  Sum_probs=17.2

Q ss_pred             CCcCCchhhhhh-ccccCCCc
Q 044362            1 KKKKAKYDGRTH-SLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H-~r~Htgek   20 (116)
                      +.|...+.|..| +++|+|++
T Consensus        10 k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A           10 RAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CBCSSSHHHHHHHTTTSCCCC
T ss_pred             cccCChHHHHHHHHHHccCCC
Confidence            468899999999 89999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.37  E-value=0.013  Score=27.95  Aligned_cols=20  Identities=25%  Similarity=0.071  Sum_probs=17.3

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      +.|...+.|..|+++|++++
T Consensus        17 k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A           17 KVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CEESSHHHHHHHHHHHCCCC
T ss_pred             ceeCCHHHHHHHHHHhCCCC
Confidence            46888999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=92.80  E-value=0.019  Score=29.52  Aligned_cols=20  Identities=30%  Similarity=0.434  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |.|...+.|..|+++|+|++
T Consensus        28 k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           28 KTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEECSSSSHHHHHHHHTTTC
T ss_pred             CccCCHHHHHHHHHHccCCC
Confidence            56888999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=89.84  E-value=0.073  Score=27.41  Aligned_cols=21  Identities=19%  Similarity=0.102  Sum_probs=16.4

Q ss_pred             CCcCCchhhhhhcc-ccCCCcc
Q 044362            1 KKKKAKYDGRTHSL-PHKKNGP   21 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htgekp   21 (116)
                      |.|...+.|..|++ +|+|+.+
T Consensus        15 k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A           15 KRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CEESSHHHHHHHHHHSSCC---
T ss_pred             cccCCHHHHHHHhhhhcCCCCC
Confidence            57889999999999 9999864

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=89.21  E-value=0.24  Score=29.77  Aligned_cols=29  Identities=21%  Similarity=0.505  Sum_probs=22.5

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCCChh
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPE   52 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~   52 (116)
                      .-..|.+||+.|.   .|.+|+.. |+|..+.+
T Consensus        20 d~iiClecGK~fK---~LkRHL~~-~hgltpee   48 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTT-HHSMTPEE   48 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHH-TTCSCHHH
T ss_pred             CceEecccchhhH---HHHHHHHH-ccCCCHHH
Confidence            3468999999988   58899999 77765544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=88.99  E-value=0.093  Score=29.69  Aligned_cols=27  Identities=15%  Similarity=0.015  Sum_probs=21.4

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCN   28 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~   28 (116)
                      |.|...+.|..|+++|+++. +.|.++.
T Consensus        21 K~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A           21 KVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            67999999999999999975 3454444

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=85.17  E-value=0.44  Score=23.54  Aligned_cols=26  Identities=19%  Similarity=0.523  Sum_probs=22.0

Q ss_pred             ceeccccchhccCchhhHHHhHhccC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      .|.|+.|.+.|.....|..|-...|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            49999999999999999999764243

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=80.91  E-value=0.65  Score=29.43  Aligned_cols=29  Identities=21%  Similarity=0.516  Sum_probs=24.9

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHh
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .+.+...|-|..|...|.+...+..|...
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence            45667789999999999999999999763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	116
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.46
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.44
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.38
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.37
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.37
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.34
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.29
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.18
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.15
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.01
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.0
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.97
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.86
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.78
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.68
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.49
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.47
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.46
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.0
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.98
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.69
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.68
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.43
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.42
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.39
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.34
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.34
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.33
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.32
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.26
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.23
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.18
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.02
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.02
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.92
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.91
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.82
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.69
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.61
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.56
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	96.51
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.29
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.27
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.15
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.13
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.92
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.86
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.82
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.79
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.64
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.02
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.86
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.72
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.64
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.39
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.3
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	93.91
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	93.91
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	92.04
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.2
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.17
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.59
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	89.95
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.56
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.14
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.13
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.09
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	85.39
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.86

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=8.5e-15  Score=75.56  Aligned_cols=37  Identities=19%  Similarity=0.444  Sum_probs=35.4

Q ss_pred             hhccccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           11 THSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        11 ~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +|+++|++++||.|..||++|.+.++|..|+++ |+|.
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~-HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc-CCCC
Confidence            689999999999999999999999999999999 9983

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.1e-14  Score=73.59  Aligned_cols=35  Identities=26%  Similarity=0.586  Sum_probs=33.5

Q ss_pred             hccccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362           12 HSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        12 H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |.|+|||||||.|..|+++|.+.++|..|+++ |.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~-H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhc-CcC
Confidence            78999999999999999999999999999999 875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=8.8e-14  Score=69.35  Aligned_cols=33  Identities=33%  Similarity=0.634  Sum_probs=31.4

Q ss_pred             ccCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           15 PHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        15 ~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +|||+|||.|..|+++|...++|..|+++ |+|.
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~-HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc-cCCC
Confidence            69999999999999999999999999999 9873

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.9e-14  Score=77.61  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=42.0

Q ss_pred             CCcCCchhhhhhccccCCCcceeccccchhccCchhhHHHhHhcc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGH   45 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h   45 (116)
                      |+|...+.|..|+++|+|++||.|..|+++|...++|..|+++ |
T Consensus        10 k~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~-H   53 (53)
T d2csha1          10 KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-H   53 (53)
T ss_dssp             CEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT-T
T ss_pred             CeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc-C
Confidence            5789999999999999999999999999999999999999988 5

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-13  Score=70.26  Aligned_cols=33  Identities=24%  Similarity=0.623  Sum_probs=31.3

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |+||||+||.|..|+++|.+.++|..|+++ |++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~-H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHH-TTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcc-cCC
Confidence            689999999999999999999999999999 765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.3e-13  Score=69.20  Aligned_cols=34  Identities=26%  Similarity=0.550  Sum_probs=30.2

Q ss_pred             cccCCCcceeccccchhccCchhhHHHhHhccCC
Q 044362           14 LPHKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        14 r~Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |+||||+||.|+.|++.|.+.++|..|++.+|+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            6899999999999999999999999998652543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=6.2e-13  Score=67.02  Aligned_cols=32  Identities=25%  Similarity=0.483  Sum_probs=30.3

Q ss_pred             cCCCcceeccccchhccCchhhHHHhHhccCCC
Q 044362           16 HKKNGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        16 Htgekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |||+|||.|.+|++.|.+.++|..|+++ |+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~-Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc-cCCc
Confidence            7999999999999999999999999999 8764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=3.2e-12  Score=68.53  Aligned_cols=40  Identities=13%  Similarity=0.243  Sum_probs=36.3

Q ss_pred             hhhhhhccccCCCcceeccc--cchhccCchhhHHHhHhccCCC
Q 044362            7 YDGRTHSLPHKKNGPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus         7 s~L~~H~r~Htgekp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ..|..|+. |+|++||.|.+  |+++|.+.++|..|+++ |+|.
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~-Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHH-HTTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhccc-ccCC
Confidence            45777875 99999999987  99999999999999999 9985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=3.6e-12  Score=61.06  Aligned_cols=28  Identities=25%  Similarity=0.686  Sum_probs=26.8

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      ||||.|..|+++|.++++|..|+++ |+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~-HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT-HTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH-HHC
T ss_pred             CcCccCCCCcCEecccccccccCCC-ccC
Confidence            6899999999999999999999999 876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.01  E-value=5.7e-11  Score=57.26  Aligned_cols=28  Identities=29%  Similarity=0.577  Sum_probs=26.8

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|++|+++|.+.++|..|+++ |+|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~-HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRS-HTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCc-ccCC
Confidence            699999999999999999999999 9985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=6.4e-11  Score=57.06  Aligned_cols=28  Identities=25%  Similarity=0.701  Sum_probs=26.8

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |||.|.+|+++|.++++|..|+++ |+|.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~-Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKT-HQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHG-GGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCc-cCCc
Confidence            699999999999999999999999 9985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=5.2e-11  Score=55.76  Aligned_cols=26  Identities=31%  Similarity=0.671  Sum_probs=24.6

Q ss_pred             cceeccccchhccCchhhHHHhHhccC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |||.|..||++|.+.++|..|+++ |+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri-HT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI-HT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH-HH
T ss_pred             CCccCCCCcCeeccCcccccCccC-CC
Confidence            699999999999999999999999 74

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=6.1e-10  Score=57.07  Aligned_cols=34  Identities=21%  Similarity=0.548  Sum_probs=30.2

Q ss_pred             CCCcceeccccchhccCchhhHHHhH-hccCCCCCh
Q 044362           17 KKNGPYTCPKCNQAFAKSQIYAAHVS-SGHYKFETP   51 (116)
Q Consensus        17 tgekp~~C~~C~k~F~~~~~l~~H~~-~~h~~~~~~   51 (116)
                      +.+|||.|..||++|...++|..|++ + |++..++
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~-Ht~ekpy   35 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQV-HTSERPH   35 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHT-SCCCCCC
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCc-cCCCcCc
Confidence            35799999999999999999999976 7 9998764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.1e-09  Score=52.93  Aligned_cols=28  Identities=21%  Similarity=0.500  Sum_probs=26.3

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |||.|++  |+++|.++++|..|+++ |+|.
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRS-HTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHH-TTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCc-CcCC
Confidence            6999988  99999999999999999 9983

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.3e-09  Score=52.66  Aligned_cols=28  Identities=25%  Similarity=0.473  Sum_probs=26.1

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |||.|++  |+++|.+.++|..|+++ |+|.
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI-HTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH-HHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccc-cCCC
Confidence            6999987  99999999999999999 9873

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.5e-09  Score=51.53  Aligned_cols=28  Identities=25%  Similarity=0.555  Sum_probs=25.9

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +||.|++  |++.|.+.++|..|+++ |+|.
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~-Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCc-cccc
Confidence            6999964  99999999999999999 9985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=6.3e-09  Score=50.90  Aligned_cols=28  Identities=32%  Similarity=0.784  Sum_probs=26.3

Q ss_pred             Ccceeccc--cchhccCchhhHHHhHhccCC
Q 044362           19 NGPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        19 ekp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |+||.|.+  |++.|.+.++|..|+++ |+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~-Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKS-HQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGG-GTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhh-ccC
Confidence            68999988  99999999999999999 875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=3.2e-09  Score=50.84  Aligned_cols=27  Identities=33%  Similarity=0.816  Sum_probs=25.3

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccCC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |||.|++  |+++|.+.++|..|+++ |+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~-HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI-HTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH-HHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc-cCC
Confidence            6999988  99999999999999999 876

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=8.3e-09  Score=48.91  Aligned_cols=26  Identities=42%  Similarity=0.895  Sum_probs=24.3

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~   46 (116)
                      +||.|++  |+++|.+.++|..|+++ |+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~-HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILT-HA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHH-HC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhh-cc
Confidence            6999988  99999999999999999 75

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=2.9e-08  Score=45.88  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=25.3

Q ss_pred             CcceeccccchhccCchhhHHHhHhccC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |+||.|..||+.|.++....+|.++ |.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~ki-H~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKI-HL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGG-GC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhh-cc
Confidence            6899999999999999999999998 75

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.6e-08  Score=44.73  Aligned_cols=26  Identities=23%  Similarity=0.630  Sum_probs=24.3

Q ss_pred             ceeccccchhccCchhhHHHhHhccCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      |..|+.|++.|++...|..|++. |+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~-htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRC-HTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-CCC
T ss_pred             CCccchhhhHhcchhHHHHHhhc-cCC
Confidence            67899999999999999999999 876

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=6.7e-09  Score=52.17  Aligned_cols=25  Identities=24%  Similarity=0.295  Sum_probs=23.3

Q ss_pred             CCcCCchhhhhhccccCCCcceecc
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYTCP   25 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~C~   25 (116)
                      |+|...+.|.+|+++|+|++||.|+
T Consensus        11 k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2          11 KSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             CEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CeeCChhHhccccCeeCCCCCEeCC
Confidence            5789999999999999999999997

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.3e-08  Score=55.22  Aligned_cols=43  Identities=16%  Similarity=0.346  Sum_probs=36.4

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCCCChhHHHHHHHhhcCCCCCCCc
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKFETPEQRAERLAARYPKRNTLQP   70 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~   70 (116)
                      ||||.|. ||+.|.....|..|+++ |++..+       |.|.++.+.+...
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~-Ht~ekp-------y~C~~C~k~F~~~   43 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSM-HLGLRP-------YGCGVCGKKFKMK   43 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHH-HSCCCS-------EECTTTSCEESSS
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhc-cccccC-------CcCCCcCCEecCH
Confidence            6899995 99999999999999999 999754       6787777766544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=6.3e-08  Score=49.31  Aligned_cols=26  Identities=19%  Similarity=0.151  Sum_probs=23.2

Q ss_pred             CCcCCchhhhhhcc-ccCCCcceeccc
Q 044362            1 KKKKAKYDGRTHSL-PHKKNGPYTCPK   26 (116)
Q Consensus         1 k~~~~ks~L~~H~r-~Htgekp~~C~~   26 (116)
                      |.|...++|..|++ +|+|++||.|++
T Consensus        13 k~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1          13 KGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCcCChHHhhccCcCccCCCcCcCCcC
Confidence            57999999999975 899999999974

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=8.6e-07  Score=40.58  Aligned_cols=29  Identities=28%  Similarity=0.462  Sum_probs=26.8

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ++||+|..|...-+.++.|..|++. |+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~-htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS-HTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT-CCSC
T ss_pred             CCcceeeecccccCCchheEEeeec-ccCc
Confidence            5899999999999999999999999 9873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=6.3e-07  Score=41.95  Aligned_cols=29  Identities=34%  Similarity=0.702  Sum_probs=26.5

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |+||.|++|...|.++..+..|.+. |-|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs-hdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS-HDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH-HSCC
T ss_pred             CCCcccchHHHHhhccccceEeeec-ccCc
Confidence            6899999999999999999999999 7653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=7.7e-07  Score=44.35  Aligned_cols=29  Identities=21%  Similarity=0.565  Sum_probs=26.4

Q ss_pred             eeccc--cchhccCchhhHHHhHhccCCCCCh
Q 044362           22 YTCPK--CNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        22 ~~C~~--C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      |.|+.  |+++|.+..+|..|+++ |+|..++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~-Htgekpy   32 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKL-HSDTRDY   32 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHH-HHTSCCC
T ss_pred             eECCCCCCCCeeCChhHhccccCe-eCCCCCE
Confidence            78876  99999999999999999 9998764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.4e-06  Score=43.87  Aligned_cols=27  Identities=30%  Similarity=0.612  Sum_probs=24.9

Q ss_pred             CCCcceeccccchhccCchhhHHHhHh
Q 044362           17 KKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        17 tgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ||-|||.|..|++.|.+..++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            588999999999999999999999765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.1e-05  Score=36.57  Aligned_cols=26  Identities=27%  Similarity=0.446  Sum_probs=23.8

Q ss_pred             eeccccchhccCchhhHHHhHhccCCC
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ..|..||++|..++.|++|..+ |+|.
T Consensus         3 hvc~ecgkaf~essklkrh~lv-htge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLV-HTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGG-TSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhc-ccCC
Confidence            5799999999999999999999 9873

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.1e-05  Score=38.35  Aligned_cols=31  Identities=19%  Similarity=0.244  Sum_probs=27.3

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCCCCh
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKFETP   51 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~~~~   51 (116)
                      +...|.+||+.|.....|.+|... |++..++
T Consensus         4 k~~~ce~cgk~frdvyhlnrhkls-hs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLS-HSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGG-SCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcc-cCCCCCC
Confidence            457899999999999999999999 9987654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.43  E-value=1.8e-05  Score=37.29  Aligned_cols=20  Identities=10%  Similarity=0.074  Sum_probs=18.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |+|...+.|..|+++|||||
T Consensus        10 k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1          10 RAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBSCHHHHHHHHHTTTSSC
T ss_pred             CCCCCchHcccccCcccCCC
Confidence            67999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=3.7e-05  Score=35.60  Aligned_cols=24  Identities=25%  Similarity=0.708  Sum_probs=22.5

Q ss_pred             cceeccc--cchhccCchhhHHHhHh
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~   43 (116)
                      |||.|.+  |++++...++|..|++.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHh
Confidence            6999988  99999999999999997

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=4.4e-05  Score=34.44  Aligned_cols=26  Identities=35%  Similarity=0.644  Sum_probs=24.3

Q ss_pred             cceeccccchhccCchhhHHHhHhccC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      +||+|..|..+-..+++|..|+++ |.
T Consensus         2 kp~kck~cdyaaadsssl~kh~ri-hs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRI-HS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH-SC
T ss_pred             CCcccccccchhcchhhHhhhhhc-cc
Confidence            799999999999999999999999 75

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.6e-05  Score=35.32  Aligned_cols=26  Identities=35%  Similarity=0.745  Sum_probs=23.3

Q ss_pred             cceeccc--cchhccCchhhHHHh-HhccC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHV-SSGHY   46 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~-~~~h~   46 (116)
                      +||.|..  |.++|+..+....|+ |+ |.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRT-Hs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRT-HS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHT-TC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccc-cc
Confidence            6999988  999999999999997 77 65

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.3e-05  Score=34.57  Aligned_cols=26  Identities=23%  Similarity=0.599  Sum_probs=24.4

Q ss_pred             eeccccchhccCchhhHHHhHhccCCC
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |.|+.|+..+...+-|..|+++ |++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRs-HT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRT-HTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH-TSSC
T ss_pred             ccccccCcccCCHHHHHHHHHH-hcCC
Confidence            7899999999999999999999 9874

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=3e-05  Score=36.49  Aligned_cols=20  Identities=15%  Similarity=0.069  Sum_probs=18.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |+|..++.|..|+++|||||
T Consensus        10 k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_          10 KRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCCSCSHHHHHHHHGGGCCC
T ss_pred             CeecchHHhhhhcCccCCcC
Confidence            68999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=3.4e-05  Score=36.87  Aligned_cols=20  Identities=15%  Similarity=0.132  Sum_probs=18.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |.|...++|..|+++|||||
T Consensus        12 k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_          12 KRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCSSHHHHHHHHTTTSCCC
T ss_pred             cCcCChhHhhhhcCcccccC
Confidence            67999999999999999986

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.26  E-value=4.7e-05  Score=34.71  Aligned_cols=25  Identities=32%  Similarity=0.768  Sum_probs=22.7

Q ss_pred             cceeccc--cchhccCchhhHHHhHhcc
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGH   45 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h   45 (116)
                      .||.|+.  |++.|+..+.|++|.++ |
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv-h   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV-H   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH-H
T ss_pred             CCccCCccCccccccCHHHHhhhhhc-c
Confidence            5899987  99999999999999887 5

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.23  E-value=7.3e-05  Score=34.91  Aligned_cols=28  Identities=32%  Similarity=0.675  Sum_probs=24.1

Q ss_pred             ceeccccchhccCchhhHHHhHhccCCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      ||.|.+|++.|++..-|.+|..-.|.|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            8999999999999999999966337764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00011  Score=33.65  Aligned_cols=26  Identities=27%  Similarity=0.523  Sum_probs=23.3

Q ss_pred             cceeccccchhccCchhhHHHhHhcc
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGH   45 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h   45 (116)
                      +||.|..|......+++|..|.++-|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999998734

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=7e-05  Score=35.43  Aligned_cols=19  Identities=21%  Similarity=0.123  Sum_probs=17.8

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |.|...+.|.+|+++||||
T Consensus        12 k~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3          12 KSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCSSHHHHHHHHHHTTTC
T ss_pred             ceECChhHhhhhcCcCcCC
Confidence            6899999999999999997

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.00016  Score=31.69  Aligned_cols=24  Identities=25%  Similarity=0.642  Sum_probs=22.0

Q ss_pred             eeccccchhccCchhhHHHhHhccC
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |.|..|.+.|...+.|.+|+++ |.
T Consensus         1 ykcglcersfveksalsrhqrv-hk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV-HK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG-TC
T ss_pred             CcccchHHHHHHHHHHHHHHHh-hc
Confidence            6899999999999999999998 64

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00018  Score=32.82  Aligned_cols=23  Identities=35%  Similarity=0.746  Sum_probs=21.9

Q ss_pred             ceeccccchhccCchhhHHHhHh
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ||.|..|.-.|....+|..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=4.3e-05  Score=36.22  Aligned_cols=19  Identities=26%  Similarity=0.344  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |+|...++|..|+++||||
T Consensus        12 k~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3          12 KRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEESCHHHHHHHHHHHHCC
T ss_pred             ceECcHHHcCccccccCCC
Confidence            6799999999999999996

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.00023  Score=32.52  Aligned_cols=27  Identities=22%  Similarity=0.620  Sum_probs=24.4

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccCC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +||.|..  |.+.|.....|.+|..+ |+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~t-htg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLT-HTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHH-HHT
T ss_pred             CCcCcccccccccchhhhhhhhhhcc-ccC
Confidence            5899976  99999999999999988 876

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00013  Score=34.55  Aligned_cols=23  Identities=30%  Similarity=0.502  Sum_probs=20.7

Q ss_pred             CCcCCchhhhhhccccCCCccee
Q 044362            1 KKKKAKYDGRTHSLPHKKNGPYT   23 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgekp~~   23 (116)
                      |.|.+.+.|.+|...|+||+||.
T Consensus        13 k~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1          13 KIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             EEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHhhhcccCCCCCCC
Confidence            46889999999999999999984

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.69  E-value=0.00053  Score=33.66  Aligned_cols=28  Identities=29%  Similarity=0.625  Sum_probs=25.0

Q ss_pred             cceeccccchhccCchhhHHHhHhccCCC
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      +.|.|..|++.|.+...|--|++. |...
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~-Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNV-HRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHT-TCCS
T ss_pred             CccCCCCCCCccCCcccccchHhh-hcch
Confidence            569999999999999999999999 7553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.61  E-value=0.00042  Score=30.78  Aligned_cols=25  Identities=24%  Similarity=0.521  Sum_probs=22.8

Q ss_pred             eccccchhccCchhhHHHhHhccCCC
Q 044362           23 TCPKCNQAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        23 ~C~~C~k~F~~~~~l~~H~~~~h~~~   48 (116)
                      .|+.|.+.|.+...|..|-+. |+|.
T Consensus         2 qcp~c~k~f~skyylkvhnr~-htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRK-HTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHH-HSSC
T ss_pred             cCcchHHHHHHhHhhhhcccc-ccCC
Confidence            699999999999999999998 8885

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.56  E-value=0.00037  Score=31.23  Aligned_cols=23  Identities=26%  Similarity=0.827  Sum_probs=20.6

Q ss_pred             ceeccccchhccCchhhHHHhHh
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ||.|..||+.+.++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999998653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00039  Score=34.43  Aligned_cols=19  Identities=21%  Similarity=0.130  Sum_probs=17.9

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |+|...++|..|+++||||
T Consensus        20 K~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          20 KSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CBCSCHHHHHHHHTTTCCS
T ss_pred             ceeeCHHHHHHhCccCCCC
Confidence            6899999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.00037  Score=33.53  Aligned_cols=19  Identities=16%  Similarity=-0.083  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |+|...++|..|+++|+||
T Consensus        15 k~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1          15 KAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             CEESSHHHHHHHHHGGGCS
T ss_pred             CEeCchHHhHhhccccCCC
Confidence            5799999999999999997

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.00093  Score=32.67  Aligned_cols=26  Identities=31%  Similarity=0.756  Sum_probs=23.2

Q ss_pred             CCcceec--cccchhccCchhhHHHhHh
Q 044362           18 KNGPYTC--PKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        18 gekp~~C--~~C~k~F~~~~~l~~H~~~   43 (116)
                      .+|||.|  +.|+..|.....|..|..-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhh
Confidence            4899999  4599999999999999876

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.15  E-value=0.0015  Score=29.59  Aligned_cols=28  Identities=25%  Similarity=0.543  Sum_probs=25.7

Q ss_pred             CcceeccccchhccCchhhHHHhHhccCC
Q 044362           19 NGPYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        19 ekp~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.-|.|.+|...|.+.-.|..|+-. |+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvs-htg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVS-HTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHH-HSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeec-ccC
Confidence            4679999999999999999999999 887

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.00042  Score=33.15  Aligned_cols=19  Identities=26%  Similarity=0.207  Sum_probs=14.1

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      +.|+..+.|..|+|+||||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4577777788888888775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.06  E-value=0.00046  Score=35.80  Aligned_cols=20  Identities=30%  Similarity=0.434  Sum_probs=18.4

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |.|...++|..|+++|||||
T Consensus        28 k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          28 KTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEECSSSSHHHHHHHHTTTC
T ss_pred             ccccCchHHHhhcccccCCC
Confidence            57899999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.92  E-value=0.00036  Score=32.34  Aligned_cols=18  Identities=17%  Similarity=0.047  Sum_probs=16.5

Q ss_pred             CCcCCchhhhhhccccCC
Q 044362            1 KKKKAKYDGRTHSLPHKK   18 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htg   18 (116)
                      |.|...++|..|+++|||
T Consensus        11 k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2          11 RNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CEESCHHHHHHHHHHHHC
T ss_pred             CEecccccccccCCCccC
Confidence            578999999999999997

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.86  E-value=0.0017  Score=28.30  Aligned_cols=22  Identities=32%  Similarity=0.828  Sum_probs=20.6

Q ss_pred             ceeccccchhccCchhhHHHhH
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVS   42 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~   42 (116)
                      ||.|..|..-|.....|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999975

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0021  Score=29.20  Aligned_cols=24  Identities=17%  Similarity=0.487  Sum_probs=21.4

Q ss_pred             cceeccccchhccCchhhHHHhHh
Q 044362           20 GPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        20 kp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      +||+|..|.-.-.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            599999999888899999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.79  E-value=0.002  Score=28.20  Aligned_cols=22  Identities=36%  Similarity=0.797  Sum_probs=20.6

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |.|+.|-+-|.+..++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999886

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.64  E-value=0.00062  Score=31.75  Aligned_cols=18  Identities=17%  Similarity=0.073  Sum_probs=16.6

Q ss_pred             CCcCCchhhhhhccccCC
Q 044362            1 KKKKAKYDGRTHSLPHKK   18 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htg   18 (116)
                      |+|...++|.+|+++|||
T Consensus        12 k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1          12 RRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEESSHHHHHHHTHHHHT
T ss_pred             cEECchhHhhhhcCccCC
Confidence            679999999999999987

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.0057  Score=27.33  Aligned_cols=25  Identities=20%  Similarity=0.476  Sum_probs=22.6

Q ss_pred             ceeccccchhccCchhhHHHhHhccC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |-+|+.|...++....|..|.++ |-
T Consensus         2 pekc~ecsyscsskaalrvh~ri-hc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERI-HC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG-GC
T ss_pred             CccCcccccccCcHHHHHHhhcc-cc
Confidence            67899999999999999999998 64

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.0074  Score=26.86  Aligned_cols=22  Identities=23%  Similarity=0.745  Sum_probs=20.6

Q ss_pred             eeccccchhccCchhhHHHhHh
Q 044362           22 YTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        22 ~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |.|+.|+....+++.|..|++-
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            7899999999999999999884

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.011  Score=27.91  Aligned_cols=26  Identities=23%  Similarity=0.631  Sum_probs=22.6

Q ss_pred             ceeccccchhccCchhhHHHhHhccCC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      .|.|..|+++|.+...+.+|-.. .+|
T Consensus         4 afvcskcgktftrrntm~rha~n-c~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN-CAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH-CCC
T ss_pred             eeeecccccchhcchHHHHHhhh-cCC
Confidence            48999999999999999999876 555

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.64  E-value=0.0037  Score=27.61  Aligned_cols=20  Identities=30%  Similarity=0.293  Sum_probs=18.3

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |+|..++.|..|-|.||||+
T Consensus         8 k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           8 KKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCCSSHHHHHHHHHHHSSCC
T ss_pred             HHHHHhHhhhhccccccCCC
Confidence            68999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.0064  Score=27.16  Aligned_cols=19  Identities=21%  Similarity=0.158  Sum_probs=17.0

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |+|...+.|.+|..+||||
T Consensus        10 kaf~essklkrh~lvhtge   28 (28)
T d1ubdc2          10 KAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEESSHHHHHHHGGGTSCC
T ss_pred             HHHHHHHHHHHHhhcccCC
Confidence            5788889999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.0043  Score=28.47  Aligned_cols=17  Identities=29%  Similarity=0.327  Sum_probs=15.7

Q ss_pred             CCcCCchhhhhhccccC
Q 044362            1 KKKKAKYDGRTHSLPHK   17 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Ht   17 (116)
                      |+|...++|.+|+++||
T Consensus        12 K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4          12 KKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCSSTTTTHHHHHHHC
T ss_pred             CcCCCHHHHHHHHhhcc
Confidence            68999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.91  E-value=0.012  Score=27.78  Aligned_cols=19  Identities=21%  Similarity=0.132  Sum_probs=17.0

Q ss_pred             CCcCCchhhhhhccccCCC
Q 044362            1 KKKKAKYDGRTHSLPHKKN   19 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htge   19 (116)
                      |+|...++|.+|+++|+..
T Consensus        13 k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_          13 KAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCBSSSHHHHHHHGGGTCC
T ss_pred             CeeCCHHHHHHHhhhccCC
Confidence            6899999999999999863

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.91  E-value=0.0072  Score=29.12  Aligned_cols=20  Identities=15%  Similarity=0.006  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |.|..+++|..|+++|+...
T Consensus        15 k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_          15 SAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CEESSHHHHHHHHGGGTSCC
T ss_pred             CcccChHHHHHHccccCCcC
Confidence            57999999999999999763

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.04  E-value=0.015  Score=27.95  Aligned_cols=20  Identities=15%  Similarity=-0.109  Sum_probs=17.6

Q ss_pred             CCcCCchhhhhhccccCCCc
Q 044362            1 KKKKAKYDGRTHSLPHKKNG   20 (116)
Q Consensus         1 k~~~~ks~L~~H~r~Htgek   20 (116)
                      |+|..++.|..|+++|+++.
T Consensus        16 k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2          16 KTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             CEESSHHHHHHHHHHTTCSS
T ss_pred             CCcCCHhHHHHhCcccCCCC
Confidence            57899999999999998763

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.20  E-value=0.056  Score=27.41  Aligned_cols=27  Identities=26%  Similarity=0.543  Sum_probs=24.4

Q ss_pred             CCCcceeccccchhccCchhhHHHhHh
Q 044362           17 KKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        17 tgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      ..+.|-.|+.|+-...++.+|.+|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999875

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.17  E-value=0.04  Score=25.13  Aligned_cols=27  Identities=33%  Similarity=0.584  Sum_probs=23.5

Q ss_pred             cceeccc--cchhccCchhhHHHhHhccCC
Q 044362           20 GPYTCPK--CNQAFAKSQIYAAHVSSGHYK   47 (116)
Q Consensus        20 kp~~C~~--C~k~F~~~~~l~~H~~~~h~~   47 (116)
                      +.|.|..  |+-.|.....|..|+.. |+|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLck-HTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSK-HTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHH-HHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhh-hcC
Confidence            4688865  99999999999999998 887

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.59  E-value=0.064  Score=23.80  Aligned_cols=22  Identities=27%  Similarity=0.821  Sum_probs=18.7

Q ss_pred             eccc--cchhccCchhhHHHhHhcc
Q 044362           23 TCPK--CNQAFAKSQIYAAHVSSGH   45 (116)
Q Consensus        23 ~C~~--C~k~F~~~~~l~~H~~~~h   45 (116)
                      .|+.  |.+.|...+.+..|+.+ |
T Consensus         3 ~CphkgC~K~Frd~saMRKHlht-H   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHT-H   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGG-G
T ss_pred             cCCcccHHHHhhchHHHHHHhhc-c
Confidence            4555  99999999999999987 5

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.95  E-value=0.05  Score=27.68  Aligned_cols=25  Identities=20%  Similarity=0.440  Sum_probs=22.2

Q ss_pred             ceeccccchhccCchhhHHHhHhccC
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~~h~   46 (116)
                      -|.|-.|++.|.....|+.|... |.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQ-HG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQ-HG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHH-HT
T ss_pred             eeeccccccccCCHHHHhHhHHh-cC
Confidence            58899999999999999999887 53

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.56  E-value=0.083  Score=24.54  Aligned_cols=23  Identities=26%  Similarity=0.564  Sum_probs=20.6

Q ss_pred             ceeccccchhccCchhhHHHhHh
Q 044362           21 PYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        21 p~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .|.|.-||-.|+..+.|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            48899999999999999999874

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.14  E-value=0.073  Score=23.33  Aligned_cols=24  Identities=38%  Similarity=0.650  Sum_probs=19.6

Q ss_pred             eeccc--cchhccCchhhHHHhHhccC
Q 044362           22 YTCPK--CNQAFAKSQIYAAHVSSGHY   46 (116)
Q Consensus        22 ~~C~~--C~k~F~~~~~l~~H~~~~h~   46 (116)
                      |.|..  |+++|.....|+.|+-+ |+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~-ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFS-HT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHH-HH
T ss_pred             eEEEecCchHHHhhccceEEEeec-cc
Confidence            55644  99999999999999877 54

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.13  E-value=0.07  Score=25.08  Aligned_cols=26  Identities=19%  Similarity=0.512  Sum_probs=20.4

Q ss_pred             eeccc--cc---hhccCchhhHHHhHhccCCC
Q 044362           22 YTCPK--CN---QAFAKSQIYAAHVSSGHYKF   48 (116)
Q Consensus        22 ~~C~~--C~---k~F~~~~~l~~H~~~~h~~~   48 (116)
                      |.|..  |.   +.|.....|..|+|. |+|.
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~-HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRR-HTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHH-HHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhh-cCCC
Confidence            55544  54   579999999999999 9873

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.09  E-value=0.066  Score=29.31  Aligned_cols=26  Identities=27%  Similarity=0.448  Sum_probs=22.8

Q ss_pred             CCcceeccccchhccCchhhHHHhHh
Q 044362           18 KNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        18 gekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      |..-|-|..|++.|.+...|..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44558999999999999999999886

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.39  E-value=0.2  Score=22.27  Aligned_cols=19  Identities=26%  Similarity=0.548  Sum_probs=16.4

Q ss_pred             cccchhccCchhhHHHhHh
Q 044362           25 PKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        25 ~~C~k~F~~~~~l~~H~~~   43 (116)
                      +.|++.|+....|.-|.+.
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4599999999999988774

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.86  E-value=0.15  Score=23.85  Aligned_cols=27  Identities=15%  Similarity=0.529  Sum_probs=23.3

Q ss_pred             CCCcceeccccchhccCchhhHHHhHh
Q 044362           17 KKNGPYTCPKCNQAFAKSQIYAAHVSS   43 (116)
Q Consensus        17 tgekp~~C~~C~k~F~~~~~l~~H~~~   43 (116)
                      .|+..|.|.+|.+.+..-+++-+|-.+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            466689999999999999999999665