Citrus Sinensis ID: 044448


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MSRTSHKTGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEFLRLNKFADLTREKFLASYTGYKPPPTDHPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGSYCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL
ccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccEECccEEEcccccHHHHHHHHHccccEEEECccccccccccEEcccccccccEEEEEEEccccccccccccEEEEEcccccccccccEEEEECcccccccccccccccccc
********GNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEFLRLNKFADLTREKFLASYTGY******************LNSSKMSFYDSIDWNERGAVTPVKDQGSYCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL
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MSRTSHKTGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEFLRLNKFADLTREKFLASYTGYKPPPTDHPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGSYCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cysteine proteinase 3 probableQ23894
Cathepsin K Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation.probableP43236
Cathepsin S Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L and cathepsin N.probableQ8HY81

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1S4V, chain A
Confidence level:very confident
Coverage over the Query: 91-308
View the alignment between query and template
View the model in PyMOL
Template: 1PCI, chain A
Confidence level:very confident
Coverage over the Query: 5-308
View the alignment between query and template
View the model in PyMOL