Citrus Sinensis ID: 044454
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 286 | ||||||
| 359488516 | 1393 | PREDICTED: receptor-like protein kinase | 0.923 | 0.189 | 0.467 | 5e-58 | |
| 296082190 | 599 | unnamed protein product [Vitis vinifera] | 0.919 | 0.439 | 0.465 | 2e-55 | |
| 296082193 | 932 | unnamed protein product [Vitis vinifera] | 0.926 | 0.284 | 0.452 | 3e-55 | |
| 359488514 | 863 | PREDICTED: receptor-like protein kinase | 0.923 | 0.305 | 0.473 | 7e-54 | |
| 147778506 | 827 | hypothetical protein VITISV_015218 [Viti | 0.926 | 0.320 | 0.473 | 8e-54 | |
| 147778507 | 511 | hypothetical protein VITISV_015219 [Viti | 0.926 | 0.518 | 0.440 | 1e-52 | |
| 359488520 | 894 | PREDICTED: receptor-like protein kinase | 0.926 | 0.296 | 0.446 | 2e-50 | |
| 255580328 | 904 | kinase, putative [Ricinus communis] gi|2 | 0.937 | 0.296 | 0.436 | 1e-49 | |
| 356568798 | 883 | PREDICTED: receptor-like protein kinase | 0.860 | 0.278 | 0.450 | 3e-47 | |
| 359488331 | 1419 | PREDICTED: receptor-like protein kinase | 0.842 | 0.169 | 0.459 | 4e-47 |
| >gi|359488516|ref|XP_003633769.1| PREDICTED: receptor-like protein kinase FERONIA-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 175/278 (62%), Gaps = 14/278 (5%)
Query: 12 FFFFSCHHLAVVVTGDSNYPLAESNIFLACGWLGNTGPPGQTWVGDVNSQYSPHEDASAP 71
+ F H+L + + G + P N + CG N + W GDV+S++SP E
Sbjct: 519 YLFIFLHYLTIPIAGYTYTP--TENFAINCGSAENWQALARNWTGDVDSKFSPSEKGELS 576
Query: 72 KSTIVTEN--KQVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSPKPGFNTSAAFFSVK 129
+++ E + PYS +R+S ++FTY F +TAGQK+IRLHFYPS F+ S AFFSVK
Sbjct: 577 TTSLAAEQPFESFPYSTARLSRNEFTYSFPLTAGQKYIRLHFYPSSYGEFDRSKAFFSVK 636
Query: 130 -AASFTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGI 188
+TLL NFSA+LAA + +EFCIN ++ LNITFTP+ D+YAFINGI
Sbjct: 637 TGGGYTLLSNFSAALAAEDIQKETIVREFCINFNEEGEKLNITFTPTAG-ADAYAFINGI 695
Query: 189 EIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGM 248
EIVSMP N YYTA D GGF+F+GQ N + + +AL +YR+NVGGK +SP+DDT GM
Sbjct: 696 EIVSMPDNLYYTAQD---GGFQFIGQQNSFFVETDHALENVYRLNVGGKSLSPTDDT-GM 751
Query: 249 YRTWEMDDPYLTDARPSALPVNQSIHL--TWIRNYSAP 284
+RTW+ DD Y + + +P N SI+L T I NY+AP
Sbjct: 752 FRTWDADDEYC--VKLAFVPANTSINLKFTQIPNYTAP 787
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082190|emb|CBI21195.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296082193|emb|CBI21198.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359488514|ref|XP_003633768.1| PREDICTED: receptor-like protein kinase FERONIA-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147778506|emb|CAN76103.1| hypothetical protein VITISV_015218 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147778507|emb|CAN76104.1| hypothetical protein VITISV_015219 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359488520|ref|XP_003633771.1| PREDICTED: receptor-like protein kinase FERONIA-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255580328|ref|XP_002530992.1| kinase, putative [Ricinus communis] gi|223529419|gb|EEF31380.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356568798|ref|XP_003552595.1| PREDICTED: receptor-like protein kinase FERONIA-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359488331|ref|XP_002277688.2| PREDICTED: receptor-like protein kinase FERONIA [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 286 | ||||||
| TAIR|locus:2081895 | 895 | FER "FERONIA" [Arabidopsis tha | 0.891 | 0.284 | 0.384 | 1.2e-36 | |
| TAIR|locus:2152312 | 880 | AT5G38990 [Arabidopsis thalian | 0.884 | 0.287 | 0.340 | 1.3e-28 | |
| TAIR|locus:2177202 | 873 | AT5G39000 [Arabidopsis thalian | 0.835 | 0.273 | 0.351 | 2.5e-27 | |
| TAIR|locus:2177152 | 806 | AT5G39030 [Arabidopsis thalian | 0.772 | 0.274 | 0.360 | 2e-26 | |
| TAIR|locus:2177142 | 813 | AT5G39020 [Arabidopsis thalian | 0.776 | 0.273 | 0.346 | 8.9e-26 | |
| TAIR|locus:2084953 | 850 | ANX1 "ANXUR1" [Arabidopsis tha | 0.594 | 0.2 | 0.360 | 2e-22 | |
| TAIR|locus:2148830 | 858 | ANX2 "ANXUR2" [Arabidopsis tha | 0.597 | 0.199 | 0.351 | 1.2e-21 | |
| TAIR|locus:2151349 | 855 | THE1 "THESEUS1" [Arabidopsis t | 0.716 | 0.239 | 0.302 | 9.8e-17 | |
| TAIR|locus:2050080 | 871 | AT2G21480 [Arabidopsis thalian | 0.720 | 0.236 | 0.329 | 5.7e-16 | |
| TAIR|locus:2136338 | 878 | AT4G39110 [Arabidopsis thalian | 0.790 | 0.257 | 0.314 | 2.5e-15 |
| TAIR|locus:2081895 FER "FERONIA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 105/273 (38%), Positives = 142/273 (52%)
Query: 21 AVVVTGDSNYPLAESNIFLACGW-LGN-TGPPGQTWVGDVNSQY--SPHEDA-SAPKSTI 75
A + ++Y E I L CG N T + W+ DV S++ S ED+ ++P T
Sbjct: 21 AATLISAADYSPTEK-ILLNCGGGASNLTDTDNRIWISDVKSKFLSSSSEDSKTSPALTQ 79
Query: 76 VTENKQVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSPKPGFNTXXXXXXXXXXXXTL 135
+VPY +RV S FTY F V +G+KF+RL+FYP+ G N TL
Sbjct: 80 DPSVPEVPYMTARVFRSPFTYTFPVASGRKFVRLYFYPNSYDGLNATNSLFSVSFGPYTL 139
Query: 136 LRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPL 195
L+NFSAS A + KEF +N+E LN+TFTP +++YAF+NGIE+ SMP
Sbjct: 140 LKNFSASQTAEALTYAFIIKEFVVNVEGGT--LNMTFTPESAPSNAYAFVNGIEVTSMP- 196
Query: 196 NFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMD 255
Y++ D G VG +I N AL +YR+NVGG ISPS DTG +YR+W D
Sbjct: 197 -DMYSSTD---GTLTMVGSSGSVTIDNSTALENVYRLNVGGNDISPSADTG-LYRSWYDD 251
Query: 256 DPYLTDAR---PSALPVNQSI-HLTWIRNYSAP 284
PY+ A P N +I + T Y AP
Sbjct: 252 QPYIFGAGLGIPETADPNMTIKYPTGTPTYVAP 284
|
|
| TAIR|locus:2152312 AT5G38990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177202 AT5G39000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177152 AT5G39030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177142 AT5G39020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2084953 ANX1 "ANXUR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2148830 ANX2 "ANXUR2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2151349 THE1 "THESEUS1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00038045001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (895 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 286 | |||
| pfam12819 | 335 | pfam12819, Malectin_like, Carbohydrate-binding pro | 1e-13 |
| >gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-13
Identities = 50/260 (19%), Positives = 83/260 (31%), Gaps = 49/260 (18%)
Query: 39 LACGWLGNTGPP----GQTWVGDVNSQYSPHEDASAPKSTIVTENKQVPYSKSRV--SHS 92
+ CG N G TWV D + + +++ + PY R
Sbjct: 1 IDCGLPSNESYTDPSTGITWVSDAGFIDTGKSGNISKENS--SSFLSKPYKTLRSFPDGK 58
Query: 93 QFTYIFNVTAGQK---FIRLHFYPSPKPGFNTSAAFFSVKAASFTLL--RNFSASLAAYG 147
+ Y VT G+ IR F G N+ SF L N ++
Sbjct: 59 RNCYTLPVTPGKGTKYLIRATFLYGNYDGLNSV-----SSPPSFDLYLGVNLWTTVNLSN 113
Query: 148 NDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGG 207
+ KE+ I++ L ++ + FI+ +E+ +P + Y ++
Sbjct: 114 DSGDSVVKEYIIHVTKSDTL-SVCLVNT---GTGTPFISALELRPLPDSLYPSSGGS--- 166
Query: 208 GFRFVGQDNPYSILNINALATLYRINVG--GKQISPSDDTGGMYRTWEMDDPYLTDARPS 265
AL + R+N G I DD R WE ++ S
Sbjct: 167 ----------------QALKLVARLNFGGSEGTIRYPDDVYD--RIWEPFFSSPGWSQIS 208
Query: 266 -ALPVNQSIHLTWIRNYSAP 284
+L V+ S + Y P
Sbjct: 209 TSLSVDISSNNAP---YIPP 225
|
Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 286 | |||
| PLN03150 | 623 | hypothetical protein; Provisional | 100.0 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 100.0 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.89 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.89 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 99.8 | |
| KOG3593 | 355 | consensus Predicted receptor-like serine/threonine | 97.47 |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=326.94 Aligned_cols=220 Identities=20% Similarity=0.225 Sum_probs=162.2
Q ss_pred CCCCCCeEEEeeCCCCC--CCCCCCeeeCCCCCCCcCCCCccccccccCCCCCCcccceeeecCC----CceEEEEecC-
Q 044454 30 YPLAESNIFLACGWLGN--TGPPGQTWVGDVNSQYSPHEDASAPKSTIVTENKQVPYSKSRVSHS----QFTYIFNVTA- 102 (286)
Q Consensus 30 ~~p~~~~~~InCG~~~~--~d~~gr~W~~D~~~~~~~~~~~~~~~~~~~p~~p~~~Y~TAR~f~~----~~tY~fpV~~- 102 (286)
++|+.+.|+||||++++ +|.+||+|++|.. +. ++.. ... ..|+.++++|+|+|+|+. ..||+||+.+
T Consensus 19 ~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~--~~-~~~~-~~~--~~~~~~~~~~~t~R~F~~~~g~~~cY~~~~~~~ 92 (623)
T PLN03150 19 ASPEPFTMRISCGARVNVRTAPTNTLWYKDFA--YT-GGIP-ANA--TRPSFIAPPLKTLRYFPLSDGPENCYNINRVPK 92 (623)
T ss_pred ccCCCccEEEeCCCCCCcccCCCCCEEcCCcc--cc-cCcc-ccc--cCcccccchhhccccCCcccccccceEeeecCC
Confidence 44433799999999984 4578999999965 43 2211 111 122334578999999996 5699999876
Q ss_pred CcEEEEEEeecCCCCCCCCCCceEEEEECC---EEEEeecccchhccCCCCCcEEEEEEEEecCCCCeEEEEEEeCCCCC
Q 044454 103 GQKFIRLHFYPSPKPGFNTSAAFFSVKAAS---FTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYN 179 (286)
Q Consensus 103 G~YlVRLHF~~~~~~~~~~~~~~FdV~in~---~~ll~~fd~~~~a~~~~~~~~~kEf~v~v~~~~~~L~I~f~P~~~~~ 179 (286)
|+|+|||||++..|++++ ..+.|||++|+ .+++.+|+.. ...++||+++++ +++.|.|||.|.+
T Consensus 93 g~ylVRl~F~~~~y~~~~-~~~~Fdv~~~~~~~~tv~~~~~~~-------~~~v~~E~i~~~--~~~~l~vcf~~~~--- 159 (623)
T PLN03150 93 GHYSVRVFFGLVAEPNFD-SEPLFDVSVEGTQISSLKSGWSSH-------DEQVFAEALVFL--TDGSASICFHSTG--- 159 (623)
T ss_pred CcEEEEEEeecCCcCCCC-CCCceEEEECcEEEEEEecCcccC-------CCcEEEEEEEEe--cCCcEEEEEecCC---
Confidence 899999999988887766 56899999999 6666666532 246899999999 8899999999986
Q ss_pred CCceeEEEEEeEEcCCccccccCCCCCCCeeeecCCCCcccchhhhhheeeeEeeCCcc----cCCCCCCCCCcceecCC
Q 044454 180 DSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQ----ISPSDDTGGMYRTWEMD 255 (286)
Q Consensus 180 ~~~afINaIEI~~lp~~ly~~~~d~~~~~~~~vg~~~~~~~~~~~aLet~yRlNvGG~~----I~~~~Dt~~l~R~W~~D 255 (286)
++.||||||||++||+++|..+. . . ..+.+||++||+||||+. +++++|..|+||+|.+|
T Consensus 160 ~~~pFIs~iEv~~l~~~~y~~~~-------~-~--------~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d 223 (623)
T PLN03150 160 HGDPAILSIEILQVDDKAYNFGP-------S-W--------GQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRM 223 (623)
T ss_pred CCCCceeEEEEEEcCcccccccc-------c-c--------cCceEEEEEEEEEecCcccccccCCCCCcccCccccCcC
Confidence 67899999999999999996211 0 0 125679999999999975 56777883469999999
Q ss_pred CCCcccCCCCCCccccceecCCCCCCCCCC
Q 044454 256 DPYLTDARPSALPVNQSIHLTWIRNYSAPD 285 (286)
Q Consensus 256 ~~yl~~~~~~~~~~~~~i~y~~~~~~~AP~ 285 (286)
++|+.+... .......|+|+..+.++||.
T Consensus 224 ~~~~~~~~~-~~st~~~I~~~~~~~~~~P~ 252 (623)
T PLN03150 224 QTFGSGSDQ-AISTENVIKKASNAPNFYPE 252 (623)
T ss_pred cccCCCccc-ccccccccccccCCCccChH
Confidence 999844321 11223445654445666664
|
|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 286 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 1e-09 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 1e-09
Identities = 24/170 (14%), Positives = 48/170 (28%), Gaps = 21/170 (12%)
Query: 41 CGWLGNTGPPGQTWVGDVNSQYSPHEDASAPKSTIVTENK--QVPYSKSRVSHSQFTYIF 98
G + G + D K I+ N QV Y R + F Y
Sbjct: 12 AGGESHVDVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNEDSFGYDI 71
Query: 99 NVTA-GQKFIRLHFYPSPKPGFNTSAAFFSVKAASFTLLRNFSASLAAYGNDRSPFFKEF 157
+ G+ + L F F V+ T++++ + + +
Sbjct: 72 PIKEEGEYVLVLKFAEVYFAQSQQK--VFDVRVNGHTVVKDLDIFDRVGHS--TAHDEII 127
Query: 158 CINIEDDQRL-----------LNITFTPSPDYNDSYAFINGIEIVSMPLN 196
I+I+ + L++ F N + + I+ +
Sbjct: 128 PISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDN---PKVCALFIMKGTAD 174
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 286 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 100.0 | |
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 97.17 | |
| 2w47_A | 144 | Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. | 93.1 | |
| 2vzp_A | 127 | Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS | 90.64 | |
| 2w3j_A | 145 | Carbohydrate binding module; sugar-binding protein | 89.97 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 87.27 | |
| 2w87_A | 139 | Esterase D, XYL-CBM35; plant cell WALL degradation | 84.63 | |
| 2wz8_A | 156 | Cellulosome protein dockerin type I; sugar binding | 83.92 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=247.51 Aligned_cols=151 Identities=15% Similarity=0.124 Sum_probs=119.6
Q ss_pred CeEEEeeCCCCCCCCCCCeeeCCCCCCCcCCCCcc---ccccccCCC-CCCcccceeeecCCCceEEEEecC-CcEEEEE
Q 044454 35 SNIFLACGWLGNTGPPGQTWVGDVNSQYSPHEDAS---APKSTIVTE-NKQVPYSKSRVSHSQFTYIFNVTA-GQKFIRL 109 (286)
Q Consensus 35 ~~~~InCG~~~~~d~~gr~W~~D~~~~~~~~~~~~---~~~~~~~p~-~p~~~Y~TAR~f~~~~tY~fpV~~-G~YlVRL 109 (286)
..|||||||+..+|.+||+|.+|.. |...+..+ ......... +|+.+|+|||+++.+++|.|||.+ |+|+|||
T Consensus 6 ~~~~INcGg~~~~d~~gr~w~~D~~--~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrL 83 (174)
T 2jwp_A 6 VIWAVNAGGESHVDVHGIHYRKDPL--EGRVGRASDYGMKLPILRSNPEDQVLYQTERYNEDSFGYDIPIKEEGEYVLVL 83 (174)
T ss_dssp EEEEEEETSSSEEETTTEEECSSCS--STTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCSCEEEEEECCSCEEEEEEE
T ss_pred EEEEEECCCCCccCCCCCEEcCCcC--cccCCcccccccceEecccCCCCchhhhhhccCCCCeEEEEEeCCCeEEEEEE
Confidence 5799999998866778999999975 43222110 000001111 356799999999999999999985 8999999
Q ss_pred EeecCCCCCCCCCCceEEEEECCEEEEeecccchhccCCCCCcEEEEEEEEecC-----------CCCeEEEEEEeCCCC
Q 044454 110 HFYPSPKPGFNTSAAFFSVKAASFTLLRNFSASLAAYGNDRSPFFKEFCINIED-----------DQRLLNITFTPSPDY 178 (286)
Q Consensus 110 HF~~~~~~~~~~~~~~FdV~in~~~ll~~fd~~~~a~~~~~~~~~kEf~v~v~~-----------~~~~L~I~f~P~~~~ 178 (286)
||||+.++. .++|+|||+|||.+++++||+..++++ ..|++|||.+++.+ .+++|+|+|.|..
T Consensus 84 hF~ei~~~~--~~~rvFdV~ing~~~l~~fdi~~~ag~--~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~-- 157 (174)
T 2jwp_A 84 KFAEVYFAQ--SQQKVFDVRVNGHTVVKDLDIFDRVGH--STAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGY-- 157 (174)
T ss_dssp EEECCSCCC--SSSSCEEEEETTEEEEEEECHHHHHSS--SSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSS--
T ss_pred EEeccccCC--CCCeEeEEEECCEEeecCcCHHHhhCC--CeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccC--
Confidence 999998875 788999999999999999999988864 47899999887421 5678999999875
Q ss_pred CCCceeEEEEEeEEcC
Q 044454 179 NDSYAFINGIEIVSMP 194 (286)
Q Consensus 179 ~~~~afINaIEI~~lp 194 (286)
...||||||||++.+
T Consensus 158 -~~~a~inaIEI~~~~ 172 (174)
T 2jwp_A 158 -YDNPKVCALFIMKGT 172 (174)
T ss_dssp -SCSSSEEEEEEESSC
T ss_pred -CCCcEEEEEEEEeCc
Confidence 567999999999864
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
| >2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A | Back alignment and structure |
|---|
| >2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* | Back alignment and structure |
|---|
| >2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
| >2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A | Back alignment and structure |
|---|
| >2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 286 | |||
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 98.24 |
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: YxiM N-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=98.24 E-value=6.8e-06 Score=66.31 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=64.7
Q ss_pred CceEEEEecCCcEEEEEEeecCCCCCCCCCCceEEEEECCEEEEeecccchhccCCCCCcEEEEEEEEecCCCCeEEEEE
Q 044454 93 QFTYIFNVTAGQKFIRLHFYPSPKPGFNTSAAFFSVKAASFTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITF 172 (286)
Q Consensus 93 ~~tY~fpV~~G~YlVRLHF~~~~~~~~~~~~~~FdV~in~~~ll~~fd~~~~a~~~~~~~~~kEf~v~v~~~~~~L~I~f 172 (286)
...|+++|++|.|.|+++|-+. ...+|.+.|...+.++.. ...-+.|.|++ .+++|+|.|
T Consensus 64 ~~~f~v~vPnG~Y~Vtv~~Gd~---------~~~~~~~eg~~~~~~~~g---------~~~~~~~~V~V--tDG~L~l~f 123 (146)
T d2o14a1 64 NNTFNVDLPNGLYEVKVTLGNT---------ARASVAAEGVFQVINMTG---------DGAEDTFQIPV--TDGQLNLLV 123 (146)
T ss_dssp SCCEEEECCSEEEEEEEEESSC---------SEEEEEETTEEEEEEEES---------TTCEEEEEEEE--CSSEEEEEE
T ss_pred CceEEEECCCCeEEEEEEEecC---------CCccEEEeeEEeccccCC---------ccEEEEEEEEE--ECCeEEEEE
Confidence 4589999999999999999862 246789999887776532 34567899999 899999999
Q ss_pred EeCCCCCCCceeEEEEEeEEcCC
Q 044454 173 TPSPDYNDSYAFINGIEIVSMPL 195 (286)
Q Consensus 173 ~P~~~~~~~~afINaIEI~~lp~ 195 (286)
..... +.++-||+|||-++++
T Consensus 124 t~~~~--G~~~~in~l~I~~~~d 144 (146)
T d2o14a1 124 TEGKA--GTAFTLSALKIKKLSD 144 (146)
T ss_dssp EESST--TSCCEEEEEEEEEEES
T ss_pred ecCCC--CCccEEEEEEEEeccc
Confidence 85542 4579999999999875
|