Citrus Sinensis ID: 044522

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
Protein Sequence
MSNVTKSPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNLCGPN
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHccccccccccccccEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEEcccEEEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEHHEEEcccccccccccccccEEccEcccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEEEEcccccHHHHHcccc
Coil and Loop (DISEMBL)
msnvtksppmppplcspckiiastlgktprrggfgavykgalrdGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYgypcngsldhnlcgpn
Flexible Loop (DISEMBL)
msnvtksppmppplcSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNgsldhnlcgpn
Low Complexity Region (SEG)
MSNVTKsppmppplcspcKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNLCGPN
Disordered region (IsUnstruct)
**************CSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNL****
Disordered Region (DISOPRED)
************PLCSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAV***************FISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNLCG**
Disordered Region (DISEMBL)
***********PPLCSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNLCGPN
Disordered Region (DISPRO)
******SPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNLCGPN
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNVTKSPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNLCGPN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	113	2.2.26 [Sep-21-2011]
P0DH62	567	Inactive protein kinase S	N/A	no	0.920	0.183	0.460	1e-23
Q9CAL8	710	Proline-rich receptor-lik	no	no	0.690	0.109	0.530	3e-13
Q9ZUE0	720	Proline-rich receptor-lik	no	no	0.690	0.108	0.530	7e-13
Q9FFW5	681	Proline-rich receptor-lik	no	no	0.707	0.117	0.506	9e-13
Q9SGY7	718	Putative proline-rich rec	no	no	0.707	0.111	0.481	1e-11
Q1PEM5	513	Proline-rich receptor-lik	no	no	0.690	0.152	0.506	2e-11
C0LGH3	1033	Probable LRR receptor-lik	no	no	0.690	0.075	0.530	6e-11
Q9LK03	717	Proline-rich receptor-lik	no	no	0.699	0.110	0.475	7e-11
Q9FXF2	1021	Probable LRR receptor-lik	no	no	0.699	0.077	0.475	7e-11
Q9LK35	855	Receptor-like protein kin	no	no	0.707	0.093	0.481	7e-11

>sp|P0DH62|Y4407_SELML Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/128 (46%), Positives = 74/128 (57%), Gaps = 24/128 (18%)

Query: 6   KSPPMPPPLCSPCKIIASTLGKTPRR---------------------GGFGAVYKGALRD 44
           +S P PPPLCS C+      GK PR+                     GG+G+VY+G L D
Sbjct: 217 QSSPQPPPLCSICQHKTPVFGKPPRKFTFAELQLATGGFSDVNFLAEGGYGSVYRGRLPD 276

Query: 45  GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-IVWLLVYGYPCNG 103
           GQ VAVK HK+  A  Q   +F +E E+LSCAQ R+LV+L+GYC E    LLVY + CNG
Sbjct: 277 GQAVAVKQHKL--ASTQGDKEFCAEVEVLSCAQQRNLVMLIGYCAEDKKRLLVYEFVCNG 334

Query: 104 SLDHNLCG 111
           SLD +L G
Sbjct: 335 SLDSHLYG 342

Selaginella moellendorffii (taxid: 88036)

>sp|Q9CAL8|PEK13_ARATH Proline-rich receptor-like protein kinase PERK13 OS=Arabidopsis thaliana GN=PERK13 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 3/81 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
           GGFG VYKG L DG++VAVK  KV S   Q   +F +E EI+S   HR LV LVGYCI +
Sbjct: 362 GGFGCVYKGKLNDGKLVAVKQLKVGS--GQGDREFKAEVEIISRVHHRHLVSLVGYCIAD 419

Query: 91  IVWLLVYGYPCNGSLDHNLCG 111
              LL+Y Y  N +L+H+L G
Sbjct: 420 SERLLIYEYVPNQTLEHHLHG 440

Regulates negatively root hairs elongation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZUE0|PEK12_ARATH Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana GN=PERK12 PE=2 SV=2

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 3/81 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
           GGFG VYKG L+DG+VVAVK  K  S   Q   +F +E EI+S   HR LV LVGYCI +
Sbjct: 380 GGFGCVYKGTLQDGKVVAVKQLKAGS--GQGDREFKAEVEIISRVHHRHLVSLVGYCISD 437

Query: 91  IVWLLVYGYPCNGSLDHNLCG 111
              LL+Y Y  N +L+H+L G
Sbjct: 438 QHRLLIYEYVSNQTLEHHLHG 458

Regulates the auxin-related MAX (More Axillary Growth) pathway during the shoot branching.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FFW5|PERK8_ARATH Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI- 89
            GGFG VYKG L DG+ VAVK  K+    +Q   +F +E EI+S   HR LV LVGYCI 
Sbjct: 347 EGGFGCVYKGVLSDGREVAVKQLKI--GGSQGEREFKAEVEIISRVHHRHLVTLVGYCIS 404

Query: 90  EIVWLLVYGYPCNGSLDHNLCGP 112
           E   LLVY Y  N +L ++L  P
Sbjct: 405 EQHRLLVYDYVPNNTLHYHLHAP 427

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SGY7|PEK11_ARATH Putative proline-rich receptor-like protein kinase PERK11 OS=Arabidopsis thaliana GN=PERK11 PE=2 SV=2

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
           GGFG VYKG L +G+ VA+K  K +S  A+   +F +E EI+S   HR LV LVGYCI E
Sbjct: 379 GGFGCVYKGILFEGKPVAIKQLKSVS--AEGYREFKAEVEIISRVHHRHLVSLVGYCISE 436

Query: 91  IVWLLVYGYPCNGSLDHNLCGPN 113
               L+Y +  N +LD++L G N
Sbjct: 437 QHRFLIYEFVPNNTLDYHLHGKN 459

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1PEM5|PERK3_ARATH Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 3/81 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE- 90
           GGFG VYKG L +G  VAVK  KV SA  +  FQ  +E  I+S   HR+LV LVGYCI  
Sbjct: 192 GGFGFVYKGILNNGNEVAVKQLKVGSAQGEKEFQ--AEVNIISQIHHRNLVSLVGYCIAG 249

Query: 91  IVWLLVYGYPCNGSLDHNLCG 111
              LLVY +  N +L+ +L G
Sbjct: 250 AQRLLVYEFVPNNTLEFHLHG 270

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 3/81 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
           GGFG VYKG L DG+ VAVK   V S   Q   QF++E   +S  QHR+LV L G C E 
Sbjct: 702 GGFGPVYKGKLNDGREVAVKLLSVGS--RQGKGQFVAEIVAISAVQHRNLVKLYGCCYEG 759

Query: 92  VW-LLVYGYPCNGSLDHNLCG 111
              LLVY Y  NGSLD  L G
Sbjct: 760 EHRLLVYEYLPNGSLDQALFG 780

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LK03|PERK2_ARATH Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI- 89
           +GGFG V+KG LR+G+ VAVK  K  S+  +  FQ  +E  I+S   HR LV LVGYCI 
Sbjct: 362 QGGFGYVFKGMLRNGKEVAVKQLKEGSSQGEREFQ--AEVGIISRVHHRHLVALVGYCIA 419

Query: 90  EIVWLLVYGYPCNGSLDHNLCG 111
           +   LLVY +  N +L+ +L G
Sbjct: 420 DAQRLLVYEFVPNNTLEFHLHG 441

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FXF2|RKF1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 3/82 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
           GGFGAV+KG L DG+VVAVK  ++ S   Q   +F++E   +SC QH +LV L G+C+E 
Sbjct: 690 GGFGAVFKGVLADGRVVAVK--QLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVER 747

Query: 92  VWLLV-YGYPCNGSLDHNLCGP 112
             LL+ Y Y  N SL   L  P
Sbjct: 748 AQLLLAYEYMENNSLSSALFSP 769

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE- 90
           GGFG VYKG L DG  VAVK     S    A F+  +E E+LS  +HR LV L+GYC E 
Sbjct: 519 GGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFR--TEIEMLSKLRHRHLVSLIGYCDER 576

Query: 91  IVWLLVYGYPCNGSLDHNLCGPN 113
              +LVY Y  NG L  +L G +
Sbjct: 577 SEMILVYEYMANGPLRSHLYGAD 599

Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner. Mediates the response of growing plant cells to the perturbation of cellulose synthesis and may act as a cell-wall-integrity sensor. Controls ectopic-lignin accumulation in cellulose-deficient mutant backgrounds.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
255543084	815	conserved hypothetical protein [Ricinus	0.964	0.133	0.545	6e-30
296085192	736	unnamed protein product [Vitis vinifera]	0.964	0.148	0.530	2e-29
356550454	698	PREDICTED: LOW QUALITY PROTEIN: inactive	0.911	0.147	0.488	9e-23
225442323	737	PREDICTED: inactive protein kinase SELMO	0.911	0.139	0.496	1e-22
357135430	758	PREDICTED: uncharacterized protein LOC10	0.929	0.138	0.472	1e-22
449531434	751	PREDICTED: LOW QUALITY PROTEIN: tyrosine	0.911	0.137	0.488	1e-22
449458185	751	PREDICTED: tyrosine-protein kinase Lck-l	0.911	0.137	0.488	2e-22
297743103	645	unnamed protein product [Vitis vinifera]	0.911	0.159	0.496	2e-22
297738688	731	unnamed protein product [Vitis vinifera]	0.929	0.143	0.480	2e-22
147839162	761	hypothetical protein VITISV_043993 [Viti	0.929	0.137	0.480	2e-22

>gi|255543084|ref|XP_002512605.1| conserved hypothetical protein [Ricinus communis] gi|223548566|gb|EEF50057.1| conserved hypothetical protein [Ricinus communis]

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/132 (54%), Positives = 83/132 (62%), Gaps = 23/132 (17%)

Query: 1   MSNVTKSPPMPPPLCSPCKIIASTLGKTPRR---------------------GGFGAVYK 39
           MS   K PP PPPLCS CK  A   GK PR+                     GG+G V+K
Sbjct: 386 MSLSIKHPPTPPPLCSICKNNAPIFGKAPRKFTYREIEKATDGFSSDNLLADGGYGLVFK 445

Query: 40  GALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY 99
           G L DGQVVAVK HK +SA  Q A +F SE EILSCAQHR+LV+L+GYCIEI WLL+Y +
Sbjct: 446 GILDDGQVVAVKQHKRLSA--QGASEFCSEVEILSCAQHRNLVMLIGYCIEIEWLLIYEF 503

Query: 100 PCNGSLDHNLCG 111
            CNGSLD +L G
Sbjct: 504 ACNGSLDKHLYG 515

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085192|emb|CBI28687.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/132 (53%), Positives = 84/132 (63%), Gaps = 23/132 (17%)

Query: 1   MSNVTKSPPMPPPLCSPCKIIASTLGKTPRR---------------------GGFGAVYK 39
           MS   K PP PPPLCS CK  A   GK PR+                     GG+GAVY+
Sbjct: 453 MSLSIKHPPTPPPLCSVCKHNAPIFGKAPRKFDYKEIIKATDGFSRQNFLAEGGYGAVYR 512

Query: 40  GALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY 99
           G L DGQVVAVK HK++SA  Q A +F SE E+L CAQHR+LV+LVGYC+E+ W+LVY +
Sbjct: 513 GVLPDGQVVAVKQHKMLSA--QGASEFCSEVEVLRCAQHRNLVMLVGYCVEVKWILVYEF 570

Query: 100 PCNGSLDHNLCG 111
            CNGSLD +L G
Sbjct: 571 ACNGSLDKHLYG 582

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550454|ref|XP_003543602.1| PREDICTED: LOW QUALITY PROTEIN: inactive protein kinase SELMODRAFT_444075-like [Glycine max]

 Score =  110 bits (275), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 78/127 (61%), Gaps = 24/127 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GGFG+V++G L DG
Sbjct: 368 TPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFXKANFLAEGGFGSVHRGLLPDG 427

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIV-WLLVYGYPCNGS 104
           QV+AVK HK+  A +Q   +F SE E+LSCAQHR++V+L+G+CIE    LLVY Y CNGS
Sbjct: 428 QVIAVKQHKL--ASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGS 485

Query: 105 LDHNLCG 111
           LD +L G
Sbjct: 486 LDSHLYG 492

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442323|ref|XP_002280107.1| PREDICTED: inactive protein kinase SELMODRAFT_444075 isoform 2 [Vitis vinifera]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 24/127 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GGFG+V++G L DG
Sbjct: 357 APPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG 416

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS 104
           Q VAVK HK+  A +Q   +F SE E+LSCAQHR++V+L+GYCIE    LLVY Y CNGS
Sbjct: 417 QAVAVKQHKL--ASSQGDVEFCSEVEVLSCAQHRNVVMLIGYCIEDRRRLLVYEYICNGS 474

Query: 105 LDHNLCG 111
           LD +L G
Sbjct: 475 LDSHLYG 481

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357135430|ref|XP_003569312.1| PREDICTED: uncharacterized protein LOC100839513 [Brachypodium distachyon]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 78/129 (60%), Gaps = 24/129 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GGFG+V++G L DG
Sbjct: 379 APPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG 438

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-EIVWLLVYGYPCNGS 104
           Q +AVK HK+  A +Q   +F SE E+LSCAQHR++V+L+G+C+ E   LLVY Y CNGS
Sbjct: 439 QAIAVKQHKL--ASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCVEERRRLLVYEYICNGS 496

Query: 105 LDHNLCGPN 113
           LD +L G N
Sbjct: 497 LDSHLYGRN 505

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531434|ref|XP_004172691.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein kinase Lck-like [Cucumis sativus]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 78/127 (61%), Gaps = 24/127 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GG+G+V++G L DG
Sbjct: 368 TPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDG 427

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-EIVWLLVYGYPCNGS 104
           QVVAVK HK+  A +Q   +F SE E+LSCAQHR++V+L+G+CI E   LLVY Y CNGS
Sbjct: 428 QVVAVKQHKL--ASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGS 485

Query: 105 LDHNLCG 111
           LD +L G
Sbjct: 486 LDSHLYG 492

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458185|ref|XP_004146828.1| PREDICTED: tyrosine-protein kinase Lck-like [Cucumis sativus]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 78/127 (61%), Gaps = 24/127 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GG+G+V++G L DG
Sbjct: 368 TPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDG 427

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-EIVWLLVYGYPCNGS 104
           QVVAVK HK+  A +Q   +F SE E+LSCAQHR++V+L+G+CI E   LLVY Y CNGS
Sbjct: 428 QVVAVKQHKL--ASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGS 485

Query: 105 LDHNLCG 111
           LD +L G
Sbjct: 486 LDSHLYG 492

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743103|emb|CBI35970.3| unnamed protein product [Vitis vinifera]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 24/127 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GGFG+V++G L DG
Sbjct: 265 APPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG 324

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS 104
           Q VAVK HK+  A +Q   +F SE E+LSCAQHR++V+L+GYCIE    LLVY Y CNGS
Sbjct: 325 QAVAVKQHKL--ASSQGDVEFCSEVEVLSCAQHRNVVMLIGYCIEDRRRLLVYEYICNGS 382

Query: 105 LDHNLCG 111
           LD +L G
Sbjct: 383 LDSHLYG 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738688|emb|CBI27933.3| unnamed protein product [Vitis vinifera]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 79/129 (61%), Gaps = 24/129 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GGFG+V++G L DG
Sbjct: 359 TPPGPPPLCSICQHKAPVFGKPPRWFTYAELELATGGFSHVNFLAEGGFGSVHRGILPDG 418

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS 104
           QVVAVK HK+  A +Q   +F SE E+LSCAQHR++V+L+G+C+E    LLVY Y CNGS
Sbjct: 419 QVVAVKQHKL--ASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS 476

Query: 105 LDHNLCGPN 113
           LD +L G +
Sbjct: 477 LDSHLYGRD 485

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147839162|emb|CAN76926.1| hypothetical protein VITISV_043993 [Vitis vinifera]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 79/129 (61%), Gaps = 24/129 (18%)

Query: 7   SPPMPPPLCSPCKIIASTLGKTPR---------------------RGGFGAVYKGALRDG 45
           +PP PPPLCS C+  A   GK PR                      GGFG+V++G L DG
Sbjct: 381 TPPGPPPLCSICQHKAPVFGKPPRWFTYAELELATGGFSHVNFLAEGGFGSVHRGILPDG 440

Query: 46  QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS 104
           QVVAVK HK+  A +Q   +F SE E+LSCAQHR++V+L+G+C+E    LLVY Y CNGS
Sbjct: 441 QVVAVKQHKL--ASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS 498

Query: 105 LDHNLCGPN 113
           LD +L G +
Sbjct: 499 LDSHLYGRD 507

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
TAIR|locus:2035686	676	AT1G55200 [Arabidopsis thalian	0.690	0.115	0.592	9.9e-19
TAIR|locus:2091511	753	AT3G13690 [Arabidopsis thalian	0.690	0.103	0.580	5.3e-18
TAIR|locus:2165041	669	AT5G56790 [Arabidopsis thalian	0.690	0.116	0.543	3.7e-16
TAIR|locus:2016154	394	AT1G70450 [Arabidopsis thalian	0.690	0.197	0.530	2.2e-13
TAIR|locus:2028911	720	PERK12 "proline-rich extensin-	0.690	0.108	0.530	8.9e-13
TAIR|locus:2026846	710	PERK13 "proline-rich extensin-	0.690	0.109	0.530	1.1e-12
TAIR|locus:2159873	681	PERK8 "proline-rich extensin-l	0.699	0.116	0.512	5.9e-12
TAIR|locus:2156992	946	AT5G49770 [Arabidopsis thalian	0.707	0.084	0.445	2e-11
TAIR|locus:2019863	971	AT1G79620 [Arabidopsis thalian	0.690	0.080	0.456	2.6e-11
TAIR|locus:2019938	718	PERK11 "proline-rich extensin-	0.707	0.111	0.481	3.6e-11

TAIR|locus:2035686 AT1G55200 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.9e-19, P = 9.9e-19
 Identities = 48/81 (59%), Positives = 61/81 (75%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
             GGFG+V++G L +GQ+VAVK HKV S   Q   +F SE E+LSCAQHR++V+L+G+CIE 
Sbjct:   388 GGFGSVHRGVLPEGQIVAVKQHKVAST--QGDVEFCSEVEVLSCAQHRNVVMLIGFCIED 445

Query:    92 VW-LLVYGYPCNGSLDHNLCG 111
                LLVY Y CNGSLD +L G
Sbjct:   446 TRRLLVYEYICNGSLDSHLYG 466

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2091511 AT3G13690 [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 5.3e-18, P = 5.3e-18
 Identities = 47/81 (58%), Positives = 62/81 (76%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
             GG+G+V++G L +GQVVAVK HK+ S+  Q   +F SE E+LSCAQHR++V+L+G+CIE 
Sbjct:   420 GGYGSVHRGVLPEGQVVAVKQHKLASS--QGDVEFCSEVEVLSCAQHRNVVMLIGFCIED 477

Query:    92 VW-LLVYGYPCNGSLDHNLCG 111
                LLVY Y CNGSLD +L G
Sbjct:   478 SRRLLVYEYICNGSLDSHLYG 498

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2165041 AT5G56790 [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 44/81 (54%), Positives = 58/81 (71%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
             GGFG+V+ G L DGQ++AVK +K+ S   Q   +F SE E+LSCAQHR++V+L+G C+E 
Sbjct:   399 GGFGSVHLGTLPDGQIIAVKQYKIAST--QGDREFCSEVEVLSCAQHRNVVMLIGLCVED 456

Query:    92 -VWLLVYGYPCNGSLDHNLCG 111
                LLVY Y CNGSL  +L G
Sbjct:   457 GKRLLVYEYICNGSLHSHLYG 477

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2016154 AT1G70450 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 43/81 (53%), Positives = 54/81 (66%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
             GGFG VYKG L+DG++VAVK  KV S   Q   +F +E EI+S   HR LV LVGYCI +
Sbjct:    58 GGFGCVYKGKLKDGKLVAVKQLKVGSG--QGDREFKAEVEIISRVHHRHLVSLVGYCIAD 115

Query:    91 IVWLLVYGYPCNGSLDHNLCG 111
                LL+Y Y  N +L+H+L G
Sbjct:   116 SERLLIYEYVPNQTLEHHLHG 136

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2028911 PERK12 "proline-rich extensin-like receptor kinase 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 8.9e-13, P = 8.9e-13
 Identities = 43/81 (53%), Positives = 52/81 (64%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
             GGFG VYKG L+DG+VVAVK  K  S   Q   +F +E EI+S   HR LV LVGYCI  
Sbjct:   380 GGFGCVYKGTLQDGKVVAVKQLKAGSG--QGDREFKAEVEIISRVHHRHLVSLVGYCISD 437

Query:    92 VW-LLVYGYPCNGSLDHNLCG 111
                LL+Y Y  N +L+H+L G
Sbjct:   438 QHRLLIYEYVSNQTLEHHLHG 458

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0032502 "developmental process" evidence=IMP

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2026846 PERK13 "proline-rich extensin-like receptor kinase 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 43/81 (53%), Positives = 53/81 (65%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
             GGFG VYKG L DG++VAVK  KV S   Q   +F +E EI+S   HR LV LVGYCI +
Sbjct:   362 GGFGCVYKGKLNDGKLVAVKQLKVGSG--QGDREFKAEVEIISRVHHRHLVSLVGYCIAD 419

Query:    91 IVWLLVYGYPCNGSLDHNLCG 111
                LL+Y Y  N +L+H+L G
Sbjct:   420 SERLLIYEYVPNQTLEHHLHG 440

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2159873 PERK8 "proline-rich extensin-like receptor kinase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 5.9e-12, P = 5.9e-12
 Identities = 42/82 (51%), Positives = 51/82 (62%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
             GGFG VYKG L DG+ VAVK  K+  +  Q   +F +E EI+S   HR LV LVGYCI E
Sbjct:   348 GGFGCVYKGVLSDGREVAVKQLKIGGS--QGEREFKAEVEIISRVHHRHLVTLVGYCISE 405

Query:    91 IVWLLVYGYPCNGSLDHNLCGP 112
                LLVY Y  N +L ++L  P
Sbjct:   406 QHRLLVYDYVPNNTLHYHLHAP 427

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005199 "structural constituent of cell wall" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2156992 AT5G49770 [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 37/83 (44%), Positives = 52/83 (62%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
             GG+G VYKG L +GQV+A+K  +      Q AF+F +E E+LS   H+++V L+G+C + 
Sbjct:   643 GGYGQVYKGTLPNGQVIAIK--RAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQ 700

Query:    92 V-WLLVYGYPCNGSLDHNLCGPN 113
                +LVY Y  NGSL   L G N
Sbjct:   701 KEQMLVYEYIPNGSLRDGLSGKN 723

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019863 AT1G79620 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 37/81 (45%), Positives = 50/81 (61%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
             GG+G VYKG L+DG +VA+K  +      Q   +F +E E+LS   H++LV LVG+C E 
Sbjct:   647 GGYGKVYKGMLQDGHMVAIK--RAQQGSTQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ 704

Query:    92 -VWLLVYGYPCNGSLDHNLCG 111
                +LVY Y  NGSL  +L G
Sbjct:   705 GEQILVYEYMSNGSLKDSLTG 725

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2019938 PERK11 "proline-rich extensin-like receptor kinase 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 3.6e-11, P = 3.6e-11
 Identities = 40/83 (48%), Positives = 53/83 (63%)

Query:    32 GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-E 90
             GGFG VYKG L +G+ VA+K  K +SA  +   +F +E EI+S   HR LV LVGYCI E
Sbjct:   379 GGFGCVYKGILFEGKPVAIKQLKSVSA--EGYREFKAEVEIISRVHHRHLVSLVGYCISE 436

Query:    91 IVWLLVYGYPCNGSLDHNLCGPN 113
                 L+Y +  N +LD++L G N
Sbjct:   437 QHRFLIYEFVPNNTLDYHLHGKN 459

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	113
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-07
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	6e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	0.001
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.002
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.003
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.004
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	0.004
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.004
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.004

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            LG T  +G FG V  G  R GQ VAVK  K  S  AQ    F++E  +++  +H +LV 
Sbjct: 9   KLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQ---AFLAEASVMTTLRHPNLVQ 64

Query: 84  LVGYCIEIVWL-LVYGYPCNGSL 105
           L+G  ++   L +V  Y   GSL
Sbjct: 65  LLGVVLQGNPLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 31 RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
          +G FG VYKG L+    VAVK  +  +       +F+ E EIL    H ++V L+G C++
Sbjct: 5  KGNFGDVYKGVLKGNTEVAVKTCR-STLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ 63

Query: 91 -----IVWLLVYG 98
               IV  LV G
Sbjct: 64 KQPIYIVMELVPG 76

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 32  GGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
           G FG V+ G         D ++VAVK  K  ++   A   F  E E+L+  QH ++V   
Sbjct: 16  GAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFY 74

Query: 86  GYCIE-IVWLLVYGYPCNGSLDHNL 109
           G C E    ++V+ Y  +G L+  L
Sbjct: 75  GVCTEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG-----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQH 78
           TLGK    G FG VYKG L+         VAVK  K   A  Q   +F+ E  I+    H
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLK-EDASEQQIEEFLREARIMRKLDH 60

Query: 79  RSLVVLVGYCIE---IVWLLVYGYPCNGSLDH 107
            ++V L+G C E   +  ++V  Y   G L  
Sbjct: 61  PNIVKLLGVCTEEEPL--MIVMEYMPGGDLLD 90

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 43.1 bits (101), Expect = 6e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 31 RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC-- 88
          +G FG V+KG L+D   VAVK  K      +   +F+SE  IL    H ++V L+G C  
Sbjct: 5  KGNFGEVFKGTLKDKTPVAVKTCK-EDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ 63

Query: 89 ---IEIVWLLVYG 98
             I IV  LV G
Sbjct: 64 RQPIYIVMELVPG 76

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 15/94 (15%)

Query: 24  TLGKTPRRGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAA--FQFISEDEILSCA 76
           TLGK    G FG VYKG L+         VAVK    +   A      +F+ E  I+   
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVK---TLKEDASEQQIEEFLREARIMRKL 58

Query: 77  QHRSLVVLVGYCIE---IVWLLVYGYPCNGSLDH 107
            H ++V L+G C E   +   +V  Y   G L  
Sbjct: 59  DHPNVVKLLGVCTEEEPL--YIVMEYMEGGDLLS 90

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 31  RGGFGAVYKGALRDGQ----VVAVKHHKVMSACAQAAFQ--FISEDEILSCAQHRSLVVL 84
            G FG VYKG L+        VAVK    +   A    +  F+ E  ++    H ++V L
Sbjct: 5   EGAFGEVYKGKLKGKDGKTTEVAVK---TLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61

Query: 85  VGYCIEIVWL-LVYGYPCNGSLDH 107
           +G C E   L LV  Y   G L  
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLD 85

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 4e-05
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 31 RGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV 82
          RG FG VYKG  L  G  VA+K   +     +A    + E ++L   +H ++V
Sbjct: 10 RGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIV 62

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 39.9 bits (93), Expect = 8e-05
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%)

Query: 24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
          TLG+    G FGAV +G    GQ VAVK+ K    C   A  F+ E  +++   H++LV 
Sbjct: 9  TLGEIIGEGEFGAVLQGEYT-GQKVAVKNIK----CDVTAQAFLEETAVMTKLHHKNLVR 63

Query: 84 LVG 86
          L+G
Sbjct: 64 LLG 66

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 31  RGGFGAVYKGALRD-----GQVVAVK--HHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            G FG VYKG L+         VAVK           +    F+ E  I+    H ++V 
Sbjct: 9   EGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREE---FLEEASIMKKLSHPNIVR 65

Query: 84  LVGYCI-EIVWLLVYGYPCNGSLDH 107
           L+G C       +V  Y   G L  
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLD 90

Length = 258

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 37.1 bits (86), Expect = 6e-04
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 24 TLGKTPRRGGFGAVYKGALR--DG--QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
           LGK    G FG+V +G L   DG    VAVK  K+         +F+SE   +    H 
Sbjct: 2  KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHP 61

Query: 80 SLVVLVGYCIE 90
          +++ L+G C E
Sbjct: 62 NVMKLIGVCFE 72

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 36.1 bits (84), Expect = 0.001
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVVLVGY 87
            GGFG VY     + G+ VA+   K++     ++   + + E EIL    H ++V L G 
Sbjct: 3   EGGFGTVYLARDKKTGKKVAI---KIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGV 59

Query: 88  CIEIVWL-LVYGYPCNGSL 105
             +   L LV  Y   GSL
Sbjct: 60  FEDENHLYLVMEYCEGGSL 78

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           T  K    G FG V+ G  R    VA+K   ++   A +   FI E +++    H +LV 
Sbjct: 7   TFLKELGSGQFGVVHLGKWRGKIDVAIK---MIREGAMSEDDFIEEAKVMMKLSHPNLVQ 63

Query: 84  LVGYCIEIVWL-LVYGYPCNGSL 105
           L G C +   + +V  Y  NG L
Sbjct: 64  LYGVCTKQRPIFIVTEYMANGCL 86

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           L +T  +G FG V  G  R G  VAVK  K   A AQA   F++E  +++  +H +LV 
Sbjct: 9  KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK-NDATAQA---FLAEASVMTQLRHSNLVQ 63

Query: 84 LVGYCIE 90
          L+G  +E
Sbjct: 64 LLGVIVE 70

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 17/79 (21%)

Query: 31 RGGFGAVYKGALR-DGQVVAVKHHKVMSACAQA-----AFQFISEDEILSCAQHRSLVVL 84
          RG FG V+ G LR D   VAVK      +C +        +F+ E  IL    H ++V L
Sbjct: 5  RGNFGEVFSGRLRADNTPVAVK------SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 58

Query: 85 VGYC-----IEIVWLLVYG 98
          +G C     I IV  LV G
Sbjct: 59 IGVCTQKQPIYIVMELVQG 77

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 35.1 bits (81), Expect = 0.004
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 24 TLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEIL-SCA 76
          TLGK    G FG V K              VAVK  K   A  +     +SE E++    
Sbjct: 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLK-DDATEKDLSDLVSEMEMMKMIG 73

Query: 77 QHRSLVVLVGYC 88
          +H++++ L+G C
Sbjct: 74 KHKNIINLLGVC 85

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 31  RGGFGAVYKGALRDGQVVA---VKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGY 87
            G FG V  G    G   A   VK  +  SA       F+ E +      H +++  +G 
Sbjct: 5   NGWFGKVLLGEAHRGMSKARVVVKELRA-SATPDEQLLFLQEVQPYRELNHPNVLQCLGQ 63

Query: 88  CIE-IVWLLVYGYPCNGSL 105
           CIE I +LLV  +   G L
Sbjct: 64  CIESIPYLLVLEFCPLGDL 82

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 34.8 bits (81), Expect = 0.004
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 24 TLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH 78
          T G+   RG FG+VY    +D G+++AVK  ++     +       E  ILS  QH
Sbjct: 3  TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH 58

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 31 RGGFGAVYKGALRD-------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           G FG VY+G   D          VAVK  +   A  Q   +F+ E  ++S   H ++V 
Sbjct: 5  SGAFGEVYEGTATDILGPGSGPIRVAVKTLR-KGATDQEKKEFLKEAHLMSNFNHPNIVK 63

Query: 84 LVGYCIE 90
          L+G C+ 
Sbjct: 64 LLGVCLL 70

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	113
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.8
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.76
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.71
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.69
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.68
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.66
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.63
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.62
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.6
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.6
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.58
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.55
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.5
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.5
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.5
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.49
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.49
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.48
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.48
KOG0605	550	consensus NDR and related serine/threonine kinases	99.47
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.47
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.46
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.46
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.45
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.45
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.45
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.45
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.45
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.44
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.44
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.43
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.43
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.42
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.42
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.42
KOG0586	596	consensus Serine/threonine protein kinase [General	99.42
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.42
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.41
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.41
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.41
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.41
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.4
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.4
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.4
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.4
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.4
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.4
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.4
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.4
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.39
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.39
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.39
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.39
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.39
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.39
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.38
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.38
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.38
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.37
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.37
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.37
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.37
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.36
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.36
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.36
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.35
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.35
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.35
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.35
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.35
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.35
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.34
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.34
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.34
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.34
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.34
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.33
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.33
KOG0610	459	consensus Putative serine/threonine protein kinase	99.33
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.33
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.33
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.33
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.33
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.33
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.33
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.33
PHA02988	283	hypothetical protein; Provisional	99.33
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.32
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.32
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.32
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.32
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.32
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.32
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.32
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.32
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.32
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.32
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.32
PTZ00267	478	NIMA-related protein kinase; Provisional	99.31
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.31
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.31
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.3
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.3
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.3
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.3
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.3
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.3
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.3
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.3
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.3
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.3
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.3
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.3
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.3
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.3
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.29
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.29
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.29
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.29
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.29
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.29
KOG0589	426	consensus Serine/threonine protein kinase [General	99.29
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.29
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.29
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.28
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.28
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.28
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.28
KOG0198	313	consensus MEKK and related serine/threonine protei	99.28
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.28
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.28
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.28
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.28
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.28
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.28
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.27
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.27
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.27
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.27
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.27
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.27
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.27
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.27
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.27
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.27
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.27
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.27
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.26
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.26
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.26
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.26
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.26
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.26
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.26
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.26
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.26
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.26
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.26
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.26
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.26
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.26
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.26
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.26
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.26
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.25
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.25
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.25
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.25
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.25
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.25
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.25
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.25
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.25
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.25
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.25
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.25
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.24
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.24
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.24
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.24
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.24
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.24
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.24
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.24
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.24
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.24
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.23
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.23
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.23
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.23
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.23
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.23
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.23
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.23
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.23
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.23
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.22
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.22
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.22
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.22
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.22
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.22
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.22
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.22
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.22
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.22
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.21
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.21
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.21
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.21
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.21
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.21
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.21
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.21
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.21
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.21
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.21
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.21
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.21
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.21
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.21
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.2
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.2
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.2
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.2
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.2
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.2
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.2
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.2
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.2
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.19
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.19
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.19
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.18
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.18
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.18
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.18
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.18
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.18
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.18
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.17
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.17
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.17
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.17
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.17
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.17
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.17
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.17
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.16
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.16
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.16
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.16
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.16
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.16
KOG0584	632	consensus Serine/threonine protein kinase [General	99.15
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.15
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.15
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.15
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.15
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.15
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.15
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.15
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.14
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.14
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.14
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.14
PTZ00283	496	serine/threonine protein kinase; Provisional	99.13
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.13
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.13
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.13
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.13
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.13
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.13
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.12
PLN00009	294	cyclin-dependent kinase A; Provisional	99.11
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.1
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.1
KOG0578	550	consensus p21-activated serine/threonine protein k	99.1
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.1
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.09
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.09
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.09
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.09
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.09
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.08
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.08
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.08
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.07
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.07
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.07
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.06
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.06
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.06
PHA03212	391	serine/threonine kinase US3; Provisional	99.06
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.05
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.05
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.05
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.04
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.04
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.04
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.04
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.03
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.03
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.03
KOG3653	534	consensus Transforming growth factor beta/activin	99.01
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.01
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.01
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.01
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.01
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.0
PRK09188	365	serine/threonine protein kinase; Provisional	99.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.99
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.99
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.99
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.98
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.98
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.95
PHA03211	461	serine/threonine kinase US3; Provisional	98.95
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.94
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.94
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.93
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.92
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.92
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.91
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.91
PRK10345	210	hypothetical protein; Provisional	98.91
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.91
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.91
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.9
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.9
PTZ00036	440	glycogen synthase kinase; Provisional	98.9
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.89
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.88
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.88
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.88
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.87
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.87
PHA03209	357	serine/threonine kinase US3; Provisional	98.87
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.86
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.85
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.85
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.84
PHA03207	392	serine/threonine kinase US3; Provisional	98.84
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.83
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.83
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.82
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.82
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.8
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.8
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.8
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.8
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.79
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.78
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.77
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.77
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.76
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.76
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.75
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.75
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.73
PTZ00284	467	protein kinase; Provisional	98.72
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.72
PHA03210	501	serine/threonine kinase US3; Provisional	98.7
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.65
PRK14879	211	serine/threonine protein kinase; Provisional	98.63
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.63
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.58
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.57
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.56
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.55
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.54
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.54
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.54
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.49
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.48
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.48
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.46
KOG1152	772	consensus Signal transduction serine/threonine kin	98.45
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.43
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.43
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.41
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.39
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.35
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.26
smart00090	237	RIO RIO-like kinase.	98.21
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.17
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.08
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.06
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.04
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.95
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.94
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.86
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.86
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.82
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	97.79
PRK12274	218	serine/threonine protein kinase; Provisional	97.71
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.71
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.67
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.6
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.58
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.53
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.51
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.37
PHA02882	294	putative serine/threonine kinase; Provisional	97.36
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.33
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.29
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.16
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.09
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.88
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.77
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.62
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.6
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.71
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	94.83
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.66
KOG1235	538	consensus Predicted unusual protein kinase [Genera	94.58
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	93.96
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	93.74
COG0478	304	RIO-like serine/threonine protein kinase fused to	93.72
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	93.33
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	93.01
PLN02876	822	acyl-CoA dehydrogenase	92.45
PRK10593	297	hypothetical protein; Provisional	92.12
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	92.03
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	91.65
KOG1243	690	consensus Protein kinase [General function predict	90.31
KOG0590	601	consensus Checkpoint kinase and related serine/thr	90.19
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	90.17
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	87.9
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	87.24
PF01636	239	APH: Phosphotransferase enzyme family This family	86.46
PRK09550	401	mtnK methylthioribose kinase; Reviewed	86.04
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	85.0
KOG3087	229	consensus Serine/threonine protein kinase [General	81.13
KOG0590	601	consensus Checkpoint kinase and related serine/thr	81.04
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	80.9

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.80  E-value=6.8e-19  Score=112.50  Aligned_cols=92  Identities=25%  Similarity=0.275  Sum_probs=80.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..|.+.+.||+|+|+.||+|.++ .+..+|||.+.......+..+.+..|+.+++.++|+|+|.++.++.++ .+++|||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            34556777999999999999975 478899999987643356667788999999999999999999999999 9999999


Q ss_pred             cCCCCChhhhccCC
Q 044522           99 YPCNGSLDHNLCGP  112 (113)
Q Consensus        99 ~~~~g~L~~~l~~~  112 (113)
                      ||.+|+|..+|++.
T Consensus        90 yC~gGDLs~yi~~~  103 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRR  103 (429)
T ss_pred             eCCCCCHHHHHHHc
Confidence            99999999999865

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-17  Score=108.00  Aligned_cols=94  Identities=45%  Similarity=0.670  Sum_probs=79.9

Q ss_pred             hhHHHHhHhc--CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e-
Q 044522           17 PCKIIASTLG--KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V-   92 (113)
Q Consensus        17 ~~~~~~~~~~--~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~-   92 (113)
                      .....+..|.  +.||+|+||.||+|.+.++..+|||.+..... .. ..+|..|+.++..++|+|+++|+|+|.+. . 
T Consensus        69 el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~-~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~  146 (361)
T KOG1187|consen   69 ELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSG-QG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEH  146 (361)
T ss_pred             HHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCC-cc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCce
Confidence            3455666676  68999999999999998888999998776542 11 55699999999999999999999999988 5 


Q ss_pred             EEEEEecCCCCChhhhccCC
Q 044522           93 WLLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~~  112 (113)
                      ..+|+||+++|+|.++++..
T Consensus       147 ~~LVYEym~nGsL~d~L~~~  166 (361)
T KOG1187|consen  147 RLLVYEYMPNGSLEDHLHGK  166 (361)
T ss_pred             EEEEEEccCCCCHHHHhCCC
Confidence            99999999999999998764

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.71  E-value=4.2e-17  Score=106.81  Aligned_cols=91  Identities=30%  Similarity=0.318  Sum_probs=80.3

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .......+.+.||+|.||.||.|.+.....+++|.+....   .....|.+|+.+|..++|+++|+++|+|..+ +++||
T Consensus       203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~---m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS---MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc---cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence            3555667788999999999999999877789999998753   3445678999999999999999999999998 89999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +|||+.|+|.++++.
T Consensus       280 tE~m~~GsLl~yLr~  294 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRT  294 (468)
T ss_pred             EEecccCcHHHHhhh
Confidence            999999999999986

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.69  E-value=2.4e-16  Score=104.12  Aligned_cols=89  Identities=34%  Similarity=0.443  Sum_probs=75.6

Q ss_pred             HhcCccccCCCceEEEEEeCC--C--cE-EEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALRD--G--QV-VAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~--~--~~-~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .+.++||+|+||.||.|.+..  +  .. ||+|...... .......++.+|+.+|+.++|+|+++++|++... +++++
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence            356899999999999998632  2  23 7999888522 3356778899999999999999999999999999 99999


Q ss_pred             EecCCCCChhhhccCC
Q 044522           97 YGYPCNGSLDHNLCGP  112 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~~  112 (113)
                      +|++.+|+|.++|++.
T Consensus       240 mEl~~gGsL~~~L~k~  255 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKN  255 (474)
T ss_pred             EEecCCCcHHHHHHhC
Confidence            9999999999998864

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.68  E-value=4.1e-16  Score=100.85  Aligned_cols=90  Identities=30%  Similarity=0.355  Sum_probs=76.7

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e~   99 (113)
                      ...+.+.+|+|+||.||+|.+++...+++|.+............|.+|+.++..++|||+++++|+|.++  ...+|+||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            3345677999999999999997555599999987653333467899999999999999999999999998  58999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|..++++
T Consensus       122 ~~~GsL~~~l~~  133 (362)
T KOG0192|consen  122 MPGGSLSVLLHK  133 (362)
T ss_pred             CCCCcHHHHHhh
Confidence            999999999865

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.66  E-value=6.7e-17  Score=110.68  Aligned_cols=92  Identities=32%  Similarity=0.383  Sum_probs=77.7

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-   91 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-   91 (113)
                      +.....+.+.||+|.||+||.+...      ....||||.++.... .+....|.+|+.++..++|+|||+++|+|..+ 
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            3344456788999999999998731      245799999987652 34677899999999999999999999999999 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      +.++|+|||..|||.++|+-
T Consensus       563 P~~MvFEYm~~GDL~eFLra  582 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEFLRA  582 (774)
T ss_pred             eeEEEEEecccccHHHHHHh
Confidence            99999999999999999863

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=2.2e-15  Score=100.44  Aligned_cols=101  Identities=23%  Similarity=0.232  Sum_probs=85.1

Q ss_pred             CCCCCchhHHHHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEE
Q 044522           11 PPPLCSPCKIIASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYC   88 (113)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~   88 (113)
                      |..+....+ ..|..++.||+|+|+.+|.+.. ..|..+|+|.++.... ...+.....+|+.+.+.+.|+|||+++.++
T Consensus         9 p~~i~D~~~-~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F   87 (592)
T KOG0575|consen    9 PEVIEDPRS-KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF   87 (592)
T ss_pred             CCeeecCCc-ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe
Confidence            334444445 7788899999999999999986 5689999999986432 245667789999999999999999999999


Q ss_pred             Eec-eEEEEEecCCCCChhhhccCC
Q 044522           89 IEI-VWLLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        89 ~~~-~~~lv~e~~~~g~L~~~l~~~  112 (113)
                      ++. ++|++.|++..++|.++++.+
T Consensus        88 EDs~nVYivLELC~~~sL~el~Krr  112 (592)
T KOG0575|consen   88 EDSNNVYIVLELCHRGSLMELLKRR  112 (592)
T ss_pred             ecCCceEEEEEecCCccHHHHHHhc
Confidence            999 999999999999999888743

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.5e-15  Score=107.09  Aligned_cols=90  Identities=33%  Similarity=0.488  Sum_probs=77.2

Q ss_pred             HhHhcCccccCCCceEEEEEeCC--C----cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD--G----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~--~----~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ...+...||+|.||.||.|.+.+  +    ..+++|.+..... .+....|.+|..+|+.++|+|+++++|+|.+. ..+
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            34567889999999999998632  2    3488888876542 56677899999999999999999999999999 999


Q ss_pred             EEEecCCCCChhhhccCC
Q 044522           95 LVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~~  112 (113)
                      |++|||++|+|..+|++.
T Consensus       772 i~leyM~gGDL~sflr~~  789 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRES  789 (1025)
T ss_pred             EEehhcccCcHHHHHHhc
Confidence            999999999999999876

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.60  E-value=7.3e-16  Score=104.20  Aligned_cols=86  Identities=27%  Similarity=0.443  Sum_probs=77.2

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ...+||-|.+|.||.|.|+ ....+++|.++.+.   -...+|..|+.+|..+.|+|+|+|+|+|... .+|||+|||.+
T Consensus       271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY  347 (1157)
T ss_pred             eeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence            4577999999999999986 47889999998763   5678899999999999999999999999999 99999999999


Q ss_pred             CChhhhccCCC
Q 044522          103 GSLDHNLCGPN  113 (113)
Q Consensus       103 g~L~~~l~~~~  113 (113)
                      |+|.+++++.+
T Consensus       348 GNLLdYLRecn  358 (1157)
T KOG4278|consen  348 GNLLDYLRECN  358 (1157)
T ss_pred             ccHHHHHHHhc
Confidence            99999998653

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.60  E-value=1.8e-15  Score=103.76  Aligned_cols=88  Identities=28%  Similarity=0.369  Sum_probs=78.0

Q ss_pred             HhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           24 TLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.++||.|.||.|++|.++    ....||||.++.... .++...|..|+.+|.+++||||++|-|+.... +++|+.|
T Consensus       632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE  710 (996)
T KOG0196|consen  632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE  710 (996)
T ss_pred             EEEEEEecccccceecccccCCCCcceeEEEeeeccCcc-HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence            46789999999999999863    245799999998643 56677899999999999999999999999999 9999999


Q ss_pred             cCCCCChhhhccCC
Q 044522           99 YPCNGSLDHNLCGP  112 (113)
Q Consensus        99 ~~~~g~L~~~l~~~  112 (113)
                      ||++|+|+.+|++.
T Consensus       711 yMENGsLDsFLR~~  724 (996)
T KOG0196|consen  711 YMENGSLDSFLRQN  724 (996)
T ss_pred             hhhCCcHHHHHhhc
Confidence            99999999999864

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.58  E-value=2.5e-15  Score=100.60  Aligned_cols=87  Identities=28%  Similarity=0.365  Sum_probs=77.1

Q ss_pred             HhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      .+.++||+|.||.|..|....+..+|+|.++.... ......|.+|+.+|.++.|||++.|+|+|..+ ++.+++||+++
T Consensus       541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn  619 (807)
T KOG1094|consen  541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN  619 (807)
T ss_pred             ehhhhhcCcccceeEEEEecCceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence            46799999999999999876678999999998652 34457899999999999999999999999998 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++..
T Consensus       620 GDLnqFl~a  628 (807)
T KOG1094|consen  620 GDLNQFLSA  628 (807)
T ss_pred             CcHHHHHHh
Confidence            999998754

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=2e-14  Score=92.70  Aligned_cols=91  Identities=22%  Similarity=0.189  Sum_probs=74.5

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH-H----HHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA-Q----AAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~-~----~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ...+.+.+.+|+|.||.|-.+..+ .+..+|+|.++...... .    ......+|+.+|..++|||+|++++++..+ .
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            345557899999999999999864 58899999998653211 0    122357999999999999999999999999 8


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .|+|+||+.||+|.+.+-
T Consensus       251 ~YmVlE~v~GGeLfd~vv  268 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVV  268 (475)
T ss_pred             eEEEEEEecCccHHHHHH
Confidence            999999999999998764

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=1.3e-13  Score=90.82  Aligned_cols=89  Identities=22%  Similarity=0.254  Sum_probs=73.0

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~   97 (113)
                      .+...++||+|.||.||++.. ..+..||+|.++.............+|+.+++.++|+||++|.++..+.   .+|+|+
T Consensus       118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF  197 (560)
T KOG0600|consen  118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF  197 (560)
T ss_pred             HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence            334457899999999999985 4588999999987664455667788999999999999999999998765   899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      |||++ +|.-++.+
T Consensus       198 eYMdh-DL~GLl~~  210 (560)
T KOG0600|consen  198 EYMDH-DLSGLLSS  210 (560)
T ss_pred             ecccc-hhhhhhcC
Confidence            99986 56555443

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.50  E-value=1.2e-13  Score=93.53  Aligned_cols=89  Identities=29%  Similarity=0.413  Sum_probs=74.9

Q ss_pred             hHhcCccccCCCceEEEEEeC---C--CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR---D--GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~---~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~   97 (113)
                      ..+.+.||.|.||.||+|.+.   .  ...||+|.-+.++. ....+.|..|+.+|+.++||++++++|+|...+.++||
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t-~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~Wivm  469 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT-PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVM  469 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC-hhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEE
Confidence            346788999999999999962   2  33578888776443 45577899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhccCC
Q 044522           98 GYPCNGSLDHNLCGP  112 (113)
Q Consensus        98 e~~~~g~L~~~l~~~  112 (113)
                      |..+.|+|..+++..
T Consensus       470 EL~~~GELr~yLq~n  484 (974)
T KOG4257|consen  470 ELAPLGELREYLQQN  484 (974)
T ss_pred             ecccchhHHHHHHhc
Confidence            999999999988653

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.50  E-value=2e-13  Score=89.79  Aligned_cols=90  Identities=27%  Similarity=0.323  Sum_probs=73.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+++.||+|+||.||+|...      .+..+++|.+..... ......+.+|+.++..+. |+|++++++++... .
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            45567899999999999998742      134689999875432 334567889999999995 99999999999888 9


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|.+++..
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             eEEEEEecCCCcHHHHHHH
Confidence            9999999999999988754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.49  E-value=5e-14  Score=96.20  Aligned_cols=89  Identities=27%  Similarity=0.284  Sum_probs=77.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC--CC--cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR--DG--QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~--~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~   97 (113)
                      ...+.+.||+|.||.|++|.|.  +|  ..||+|+++.... ......|.+|+.+|..++|+++++|+|+..++...+|+
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l-~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~  189 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL-NAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVF  189 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc-chhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHh
Confidence            4456789999999999999974  23  3689999988764 34778899999999999999999999999998899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      |..+.|+|.+.+++
T Consensus       190 ELaplGSLldrLrk  203 (1039)
T KOG0199|consen  190 ELAPLGSLLDRLRK  203 (1039)
T ss_pred             hhcccchHHHHHhh
Confidence            99999999998876

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.49  E-value=8.5e-14  Score=93.32  Aligned_cols=86  Identities=26%  Similarity=0.390  Sum_probs=77.3

Q ss_pred             HhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCC
Q 044522           24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNG  103 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g  103 (113)
                      .+++.||+|.||+||+|.|.  ..||||.++.........+.|.+|+..++..+|.||+-+.|+|..+...||+.|+.|.
T Consensus       395 ~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGs  472 (678)
T KOG0193|consen  395 LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGS  472 (678)
T ss_pred             hccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCc
Confidence            45788999999999999986  3699999988776577889999999999999999999999999999559999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|+.+++-
T Consensus       473 SLY~hlHv  480 (678)
T KOG0193|consen  473 SLYTHLHV  480 (678)
T ss_pred             hhhhhccc
Confidence            99999874

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.48  E-value=3.6e-14  Score=94.99  Aligned_cols=89  Identities=24%  Similarity=0.211  Sum_probs=77.4

Q ss_pred             HhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .|.+-+.||+|+||.||+|..+. ...+|+|.+.......+..+.+.+|+++++.+.|+|++.++.+++.. +.++|.||
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            45667889999999999998654 66799999987665567788899999999999999999999999999 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+ +|..++..
T Consensus        83 a~g-~L~~il~~   93 (808)
T KOG0597|consen   83 AVG-DLFTILEQ   93 (808)
T ss_pred             hhh-hHHHHHHh
Confidence            986 89887754

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.48  E-value=2.6e-13  Score=88.55  Aligned_cols=90  Identities=30%  Similarity=0.347  Sum_probs=73.8

Q ss_pred             HHhHhcCccccCCCceEEEEEe------CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL------RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+++.||+|+||.||++.+      ..+..+++|.++.... ......+.+|+.++..+ .|+|++++++.+... .
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            3566789999999999999863      1245799999875432 23445688899999998 899999999999988 9


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|..+++.
T Consensus       114 ~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             ceeeehhccCCcHHHHHHh
Confidence            9999999999999988864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.47  E-value=3.5e-13  Score=89.15  Aligned_cols=88  Identities=22%  Similarity=0.187  Sum_probs=75.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.++||+|+||.||.+.-+ .|..+|+|.++.... ...+...+..|-.+|...+++++|+|+..+.+. ++||||||+
T Consensus       144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEyl  223 (550)
T KOG0605|consen  144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYL  223 (550)
T ss_pred             hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEec
Confidence            35688999999999999854 488899999987653 345677788888999999999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      +||++-.+|.+
T Consensus       224 PGGD~mTLL~~  234 (550)
T KOG0605|consen  224 PGGDMMTLLMR  234 (550)
T ss_pred             CCccHHHHHHh
Confidence            99999887754

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.47  E-value=9.1e-13  Score=86.76  Aligned_cols=93  Identities=27%  Similarity=0.294  Sum_probs=75.9

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEe
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIE   90 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~   90 (113)
                      .....+.+.+.||+|+||.||++.+.      .+..+++|.++.... ......+.+|+.++..+. |+|++++++.+..
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~  112 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTK  112 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence            34455667899999999999999853      235799999976432 233456888999999997 9999999999988


Q ss_pred             c-eEEEEEecCCCCChhhhccC
Q 044522           91 I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      . ..++++||+.+|+|.++++.
T Consensus       113 ~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         113 GGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             CCCcEEEEeccCCCcHHHHHHh
Confidence            8 99999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=6.6e-14  Score=84.89  Aligned_cols=91  Identities=26%  Similarity=0.300  Sum_probs=76.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ....+++.||+|-||.||.+..+ ....+++|++..... ..+...++.+|+.+...+.|||+++++++..+. .+++++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            34467899999999999999975 466789999876542 123356688999999999999999999999999 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||..+|+++..++.
T Consensus       102 Eya~~gel~k~L~~  115 (281)
T KOG0580|consen  102 EYAPRGELYKDLQE  115 (281)
T ss_pred             EecCCchHHHHHHh
Confidence            99999999988763

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.46  E-value=9.1e-13  Score=82.09  Aligned_cols=90  Identities=23%  Similarity=0.323  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ..+.+.+.||+|+||.||++.+.    .+..+++|.++.... ......+.+|+..+..+.|+|++++.+.+... ..++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            34567888999999999999753    255789998876432 33445688899999999999999999999888 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|..++.+
T Consensus        84 v~e~~~~~~L~~~l~~   99 (266)
T cd05064          84 VTEYMSNGALDSFLRK   99 (266)
T ss_pred             EEEeCCCCcHHHHHHh
Confidence            9999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.45  E-value=1.1e-13  Score=89.95  Aligned_cols=92  Identities=20%  Similarity=0.227  Sum_probs=78.8

Q ss_pred             HHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      -.+.+.+.||+|.+|.|-++.. ..|..||||.++.... +.+..-...+|+.+|..++||++++++.++... .+.+||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            3556789999999999998874 4689999999987542 244556688999999999999999999999998 999999


Q ss_pred             ecCCCCChhhhccCC
Q 044522           98 GYPCNGSLDHNLCGP  112 (113)
Q Consensus        98 e~~~~g~L~~~l~~~  112 (113)
                      ||..+|+|++++.++
T Consensus       133 EYaS~GeLYDYiSer  147 (668)
T KOG0611|consen  133 EYASGGELYDYISER  147 (668)
T ss_pred             EecCCccHHHHHHHh
Confidence            999999999998754

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.45  E-value=1.2e-12  Score=83.27  Aligned_cols=85  Identities=26%  Similarity=0.197  Sum_probs=73.3

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e-EEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V-WLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~-~~lv~e~~~  101 (113)
                      ....||+|+.|.|+++.++ .+..+|+|.+..... ....+++.+|+.+++..+||++|.++|++... . +.++||||.
T Consensus        83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~-~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNID-PALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCC-HHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            3567999999999999975 577899999955432 45567789999999999999999999999988 5 999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      +|+|+..+.
T Consensus       162 gGSLd~~~k  170 (364)
T KOG0581|consen  162 GGSLDDILK  170 (364)
T ss_pred             CCCHHHHHh
Confidence            999998765

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.45  E-value=5.5e-13  Score=83.14  Aligned_cols=92  Identities=23%  Similarity=0.148  Sum_probs=78.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ....+...+|.|+||+|.....+ .+..+|+|.+.... ...++.+...+|..++..+.||+++.+++.+.+. ++++||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            44456788999999999988764 47889999998654 2355677788999999999999999999999999 999999


Q ss_pred             ecCCCCChhhhccCC
Q 044522           98 GYPCNGSLDHNLCGP  112 (113)
Q Consensus        98 e~~~~g~L~~~l~~~  112 (113)
                      ||++||+|+.++++.
T Consensus       124 eyv~GGElFS~Lrk~  138 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKS  138 (355)
T ss_pred             eccCCccHHHHHHhc
Confidence            999999999999874

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.45  E-value=1.5e-12  Score=82.56  Aligned_cols=89  Identities=25%  Similarity=0.340  Sum_probs=72.4

Q ss_pred             HhHhcCccccCCCceEEEEEeCC-----------------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCcccee
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD-----------------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL   84 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~-----------------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l   84 (113)
                      .+.+.+.||+|+||.||.+.+..                 +..+++|.+..... ......+.+|+.++..+.|+|++++
T Consensus         6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            44567889999999999987421                 23689998876432 3445668899999999999999999


Q ss_pred             eeEEEec-eEEEEEecCCCCChhhhccC
Q 044522           85 VGYCIEI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        85 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++... ..++++||+.+|+|.+++..
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSS  112 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHh
Confidence            9999888 89999999999999887643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.45  E-value=2.9e-13  Score=83.25  Aligned_cols=90  Identities=20%  Similarity=0.208  Sum_probs=75.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +|...+.+|+|.||.||++... .+..||||.+........-.....+|+.++..++|+|++.+.+++... .+.+|+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            4555678999999999999864 588999999988754333456688999999999999999999999888 99999999


Q ss_pred             CCCCChhhhccCC
Q 044522          100 PCNGSLDHNLCGP  112 (113)
Q Consensus       100 ~~~g~L~~~l~~~  112 (113)
                      ++. +|...|+++
T Consensus        83 m~t-dLe~vIkd~   94 (318)
T KOG0659|consen   83 MPT-DLEVVIKDK   94 (318)
T ss_pred             ccc-cHHHHhccc
Confidence            985 788877764

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.44  E-value=1.2e-12  Score=85.58  Aligned_cols=88  Identities=20%  Similarity=0.134  Sum_probs=73.1

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+.+. ..++++||+
T Consensus         4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~   83 (381)
T cd05626           4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI   83 (381)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecC
Confidence            34577999999999999864 477899999875431 123456688899999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus        84 ~gg~L~~~l~~   94 (381)
T cd05626          84 PGGDMMSLLIR   94 (381)
T ss_pred             CCCcHHHHHHh
Confidence            99999887753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1e-14  Score=90.43  Aligned_cols=91  Identities=25%  Similarity=0.254  Sum_probs=75.8

Q ss_pred             HHHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe-c--eEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-I--VWLL   95 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~-~--~~~l   95 (113)
                      ...+.+.++||+|+||.||+... .++..+|.|.++-...+.+....+..|+.+++.++|||++++++.... .  -+.|
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            35667889999999999999874 568889999888665556677789999999999999999999884433 3  4899


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      +||++.+|+|...|+
T Consensus        98 vmE~c~~GDLsqmIk  112 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIK  112 (375)
T ss_pred             HHHhhcccCHHHHHH
Confidence            999999999988764

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.43  E-value=8.1e-13  Score=84.87  Aligned_cols=90  Identities=28%  Similarity=0.327  Sum_probs=71.9

Q ss_pred             HHhHhcCccccCCCceEEEEEe------CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL------RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--   91 (113)
                      ..+.+.+.||+|+||.||++..      ..+..+++|.+..... ......+.+|+.++..+ +|+|++++++.+...  
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            3456788999999999999863      1245799998875321 33456688899999998 899999999988765  


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+++|+|.+++..
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHh
Confidence            68899999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.43  E-value=3.8e-12  Score=81.84  Aligned_cols=90  Identities=20%  Similarity=0.091  Sum_probs=75.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            34567788999999999999865 477788888775421 34456688999999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|.+++.+
T Consensus        84 ~~~~~~L~~~l~~   96 (333)
T cd06650          84 HMDGGSLDQVLKK   96 (333)
T ss_pred             cCCCCcHHHHHHH
Confidence            9999999988754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=2e-12  Score=84.33  Aligned_cols=88  Identities=18%  Similarity=0.151  Sum_probs=72.6

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+.+. ..++++||+
T Consensus         4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~   83 (377)
T cd05629           4 HTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFL   83 (377)
T ss_pred             eEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCC
Confidence            45678999999999999864 578899999865321 123445678899999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|..++.+
T Consensus        84 ~gg~L~~~l~~   94 (377)
T cd05629          84 PGGDLMTMLIK   94 (377)
T ss_pred             CCCcHHHHHHh
Confidence            99999887753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.42  E-value=1.3e-12  Score=83.88  Aligned_cols=92  Identities=20%  Similarity=0.203  Sum_probs=76.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ...+.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++.+... ..+++
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            455667889999999999999875 478899999875321 123445678899999999999999999999988 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+.+|+|.+++.+
T Consensus        97 ~e~~~~~~L~~~l~~  111 (329)
T PTZ00263         97 LEFVVGGELFTHLRK  111 (329)
T ss_pred             EcCCCCChHHHHHHH
Confidence            999999999887754

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.42  E-value=7.1e-13  Score=84.24  Aligned_cols=93  Identities=24%  Similarity=0.193  Sum_probs=77.7

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .....+.++||+|+||.|+..... .+..+|+|+++.... ..........|..++..++||.++.++..+.+. ..|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            344456789999999999998754 478899999986542 233566788899999999999999999999999 99999


Q ss_pred             EecCCCCChhhhccCC
Q 044522           97 YGYPCNGSLDHNLCGP  112 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~~  112 (113)
                      +||+.||+|..+|++.
T Consensus       104 ld~~~GGeLf~hL~~e  119 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQRE  119 (357)
T ss_pred             EeccCCccHHHHHHhc
Confidence            9999999999988754

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.42  E-value=1.1e-12  Score=87.87  Aligned_cols=91  Identities=22%  Similarity=0.176  Sum_probs=79.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      -.+.+..+||+|.|+.|..+... .+..|++|.++...........+.+|+.+|..++|||+++++++...+ .+++|+|
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e  135 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME  135 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence            34556788999999999998853 588999999988765455556689999999999999999999999999 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |..+|++++++.+
T Consensus       136 ya~~ge~~~yl~~  148 (596)
T KOG0586|consen  136 YASGGELFDYLVK  148 (596)
T ss_pred             eccCchhHHHHHh
Confidence            9999999998764

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=1.4e-12  Score=84.54  Aligned_cols=89  Identities=21%  Similarity=0.173  Sum_probs=73.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+... ..++++||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEY   82 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECC
Confidence            345678999999999999864 478899999875321 123445577899999999999999999999988 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|.+++.+
T Consensus        83 ~~~g~L~~~l~~   94 (364)
T cd05599          83 LPGGDMMTLLMK   94 (364)
T ss_pred             CCCcHHHHHHHH
Confidence            999999988754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.41  E-value=2.7e-12  Score=82.84  Aligned_cols=94  Identities=22%  Similarity=0.186  Sum_probs=76.0

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeCC--CcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALRD--GQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      .....+.+.+.||+|+||.||.+....  +..+++|.+..... .......+.+|+.++..++|+|++++++++... ..
T Consensus        27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~  106 (340)
T PTZ00426         27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL  106 (340)
T ss_pred             CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence            345566778899999999999998543  35799998865321 123455678899999999999999999999988 99


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+|+|..++.+
T Consensus       107 ~lv~Ey~~~g~L~~~i~~  124 (340)
T PTZ00426        107 YLVLEFVIGGEFFTFLRR  124 (340)
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999988754

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.41  E-value=8.4e-14  Score=96.43  Aligned_cols=93  Identities=25%  Similarity=0.304  Sum_probs=77.7

Q ss_pred             HHHHhHhcCccccCCCceEEEEEe-CC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGAL-RD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVW   93 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~-~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~   93 (113)
                      +-......++||.|+||.||+|.| +.    +.+|++|.+..... .+...++..|+..|..++|+|+++++|+|....+
T Consensus       694 kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~  772 (1177)
T KOG1025|consen  694 KETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDHPNLLRLLGVCMLSTL  772 (1177)
T ss_pred             hhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCCchHHHHhhhcccchH
Confidence            334445678899999999999986 32    45789998876543 4567789999999999999999999999988888


Q ss_pred             EEEEecCCCCChhhhccCC
Q 044522           94 LLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~~  112 (113)
                      .||++|++.|.|.++++..
T Consensus       773 qlvtq~mP~G~LlDyvr~h  791 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREH  791 (1177)
T ss_pred             HHHHHhcccchHHHHHHHh
Confidence            8999999999999998753

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.41  E-value=2.7e-12  Score=83.85  Aligned_cols=87  Identities=21%  Similarity=0.133  Sum_probs=72.4

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ..+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++.+.+. ..++|+||++
T Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~   84 (382)
T cd05625           5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP   84 (382)
T ss_pred             EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence            4577999999999999864 477899999875321 123455688899999999999999999999988 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|..++.+
T Consensus        85 gg~L~~~l~~   94 (382)
T cd05625          85 GGDMMSLLIR   94 (382)
T ss_pred             CCcHHHHHHh
Confidence            9999888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.41  E-value=8.7e-13  Score=82.01  Aligned_cols=86  Identities=38%  Similarity=0.520  Sum_probs=69.6

Q ss_pred             hcCccccCCCceEEEEEeC-----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           25 LGKTPRRGGFGAVYKGALR-----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      +.+.||.|.||.||+|.+.     .+..+++|.+..... ......+.+|+..+..++|+|+++++|++... ..++++|
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS-EEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS-HHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc-cccceeeeeccccccccccccccccccccccccccccccc
Confidence            4577999999999999875     256789999965432 44577889999999999999999999999977 8999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|.+++..
T Consensus        82 ~~~~g~L~~~L~~   94 (259)
T PF07714_consen   82 YCPGGSLDDYLKS   94 (259)
T ss_dssp             --TTEBHHHHHHH
T ss_pred             ccccccccccccc
Confidence            9999999988764

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=2.7e-12  Score=82.39  Aligned_cols=89  Identities=21%  Similarity=0.271  Sum_probs=73.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... .......+..|+.++..+.|+|++++++.+... ..++++||
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   82 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY   82 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence            345678999999999999875 478899999875421 123345678899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|.+++.+
T Consensus        83 ~~g~~L~~~l~~   94 (333)
T cd05600          83 VPGGDFRTLLNN   94 (333)
T ss_pred             CCCCCHHHHHHH
Confidence            999999988753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.40  E-value=5.1e-12  Score=81.13  Aligned_cols=88  Identities=20%  Similarity=0.078  Sum_probs=73.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++.+... ..++++||+
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   85 (331)
T cd06649           7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   85 (331)
T ss_pred             ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecC
Confidence            445678999999999999865 477899998875421 34456688999999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus        86 ~~~~L~~~l~~   96 (331)
T cd06649          86 DGGSLDQVLKE   96 (331)
T ss_pred             CCCcHHHHHHH
Confidence            99999988754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.40  E-value=2.7e-12  Score=83.62  Aligned_cols=88  Identities=22%  Similarity=0.136  Sum_probs=72.6

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++.+... ..++++||+
T Consensus         4 ~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~   83 (376)
T cd05598           4 VKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI   83 (376)
T ss_pred             eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCC
Confidence            45678999999999999864 478899999865321 122345677899999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus        84 ~~g~L~~~i~~   94 (376)
T cd05598          84 PGGDMMSLLIR   94 (376)
T ss_pred             CCCcHHHHHHh
Confidence            99999988754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=1.7e-12  Score=84.59  Aligned_cols=92  Identities=24%  Similarity=0.251  Sum_probs=75.5

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh--H-HHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC--A-QAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~--~-~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~   93 (113)
                      ...+.+++.||+|+||.|+.+... .+..+|+|.++.....  . .....+.+|+.+++.+. |||+++++.+.... .+
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            345677899999999999999754 5789999976653110  1 23445668999999998 99999999999999 99


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++|+||+.+|+|++++.+
T Consensus        96 ~ivmEy~~gGdL~~~i~~  113 (370)
T KOG0583|consen   96 YIVMEYCSGGDLFDYIVN  113 (370)
T ss_pred             EEEEEecCCccHHHHHHH
Confidence            999999999999998876

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.40  E-value=4.6e-12  Score=78.51  Aligned_cols=89  Identities=25%  Similarity=0.241  Sum_probs=76.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||.|+||.||.+....+..+++|.+....  ......+..|+..+..++|+|++++.+++... ..++++||
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            4466788999999999999997767889999987654  33455688899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        84 ~~~~~L~~~~~~   95 (261)
T cd05148          84 MEKGSLLAFLRS   95 (261)
T ss_pred             cccCCHHHHHhc
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.40  E-value=2.9e-12  Score=80.25  Aligned_cols=82  Identities=23%  Similarity=0.303  Sum_probs=66.1

Q ss_pred             ccccCCCceEEEEEeCC-------------------------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccc
Q 044522           28 TPRRGGFGAVYKGALRD-------------------------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV   82 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~-------------------------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~   82 (113)
                      .||+|+||.||+|.+..                         ...+++|.+....  ......+.+++.++..+.|+|++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence            68999999999986410                         1347788776543  33455678888899999999999


Q ss_pred             eeeeEEEec-eEEEEEecCCCCChhhhccC
Q 044522           83 VLVGYCIEI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        83 ~l~~~~~~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++++... ..++|+||+++|+|..++++
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~  109 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRK  109 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence            999999988 89999999999999888754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.40  E-value=7.3e-12  Score=77.17  Aligned_cols=84  Identities=31%  Similarity=0.438  Sum_probs=70.8

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      +.||+|+||.||++...++..+++|.+..... ......+.+|+..+..++|+|++++.+.+... ..++++||+++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            46899999999999876778899998875432 33445688899999999999999999999888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        80 ~~~~~~   85 (250)
T cd05085          80 LSFLRK   85 (250)
T ss_pred             HHHHHh
Confidence            987753

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=6.1e-13  Score=90.21  Aligned_cols=89  Identities=25%  Similarity=0.216  Sum_probs=75.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+++.||+|+.|.|..+... .|...|||.+..+. .........-+|+.+|+-+.|+|+++++.++... +.|++.||+
T Consensus        15 kLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv   94 (786)
T KOG0588|consen   15 KLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYV   94 (786)
T ss_pred             eccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEec
Confidence            57899999999999988754 58899999998762 2233445577899999999999999999999999 999999999


Q ss_pred             CCCChhhhccCC
Q 044522          101 CNGSLDHNLCGP  112 (113)
Q Consensus       101 ~~g~L~~~l~~~  112 (113)
                      ++|+|++++.++
T Consensus        95 ~gGELFdylv~k  106 (786)
T KOG0588|consen   95 PGGELFDYLVRK  106 (786)
T ss_pred             CCchhHHHHHhh
Confidence            999999987653

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.39  E-value=1.8e-11  Score=79.25  Aligned_cols=87  Identities=22%  Similarity=0.124  Sum_probs=72.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            34556788999999999999864 578899999865431 33455688999999999999999999999888 9999999


Q ss_pred             cCCCCChhhh
Q 044522           99 YPCNGSLDHN  108 (113)
Q Consensus        99 ~~~~g~L~~~  108 (113)
                      |+.+|+|...
T Consensus       153 ~~~~~~L~~~  162 (353)
T PLN00034        153 FMDGGSLEGT  162 (353)
T ss_pred             cCCCCccccc
Confidence            9999988654

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.39  E-value=3.7e-12  Score=78.80  Aligned_cols=86  Identities=29%  Similarity=0.324  Sum_probs=72.1

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.+.||+|+||.||.+.+..+..+++|.+....   .....+..|+.++..++|+|++++++.+... ..++++||++
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA---MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             cEEeeEecCCcCceEEEEEeccCceEEEEecccCC---ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            44567899999999999987666789999876443   2234677899999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|.+++.+
T Consensus        83 ~~~L~~~~~~   92 (256)
T cd05114          83 NGCLLNYLRQ   92 (256)
T ss_pred             CCcHHHHHHh
Confidence            9999988753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.39  E-value=3.3e-12  Score=83.49  Aligned_cols=91  Identities=24%  Similarity=0.196  Sum_probs=76.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ..|.+++.||+|.||.||.+.... +..+|+|.+...... ......+.+|+.+|..+. |+|++.+.+.+.+. ..++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            345677999999999999999764 889999999865421 123457889999999998 99999999999999 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +|++.||+|++.|..
T Consensus       115 mEL~~GGeLfd~i~~  129 (382)
T KOG0032|consen  115 MELCEGGELFDRIVK  129 (382)
T ss_pred             EEecCCchHHHHHHH
Confidence            999999999987753

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.39  E-value=7.6e-12  Score=77.22  Aligned_cols=84  Identities=30%  Similarity=0.431  Sum_probs=70.5

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS  104 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~  104 (113)
                      +.||+|+||.||++... .+..+++|....... ......+.+|+.++..++|+|++++++++... ..++++||+++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            46899999999999864 577899998764321 34456788999999999999999999999888 9999999999999


Q ss_pred             hhhhccC
Q 044522          105 LDHNLCG  111 (113)
Q Consensus       105 L~~~l~~  111 (113)
                      |.+++.+
T Consensus        80 L~~~~~~   86 (252)
T cd05084          80 FLTFLRT   86 (252)
T ss_pred             HHHHHHh
Confidence            9988754

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1.6e-12  Score=82.08  Aligned_cols=89  Identities=19%  Similarity=0.111  Sum_probs=73.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++.+.+. ..++++||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   82 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY   82 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence            345678999999999999865 578899999875321 123445678899999999999999999988888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|.+++.+
T Consensus        83 ~~~~~L~~~~~~   94 (291)
T cd05612          83 VPGGELFSYLRN   94 (291)
T ss_pred             CCCCCHHHHHHH
Confidence            999999988754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.39  E-value=5.9e-12  Score=78.49  Aligned_cols=84  Identities=30%  Similarity=0.439  Sum_probs=68.1

Q ss_pred             CccccCCCceEEEEEeCC---CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALRD---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||+|...+   +..+++|.++.... ......+.+|+.++..++|+|++++++.+... ..++++||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            358999999999997532   34688888765432 23345688899999999999999999999888 89999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|.+++++
T Consensus        80 g~L~~~l~~   88 (269)
T cd05087          80 GDLKGYLRS   88 (269)
T ss_pred             CcHHHHHHH
Confidence            999988753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.38  E-value=2.8e-12  Score=83.69  Aligned_cols=91  Identities=32%  Similarity=0.356  Sum_probs=74.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-   91 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-   91 (113)
                      ...+.+.+.||+|+||.||++...      .+..+++|.+..... ......+.+|+.++..+ .|+|++++++.+... 
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            345667899999999999988741      234799999876432 33455688899999998 899999999999888 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+.+|+|.++++.
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHh
Confidence            99999999999999988754

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.38  E-value=5.4e-12  Score=81.95  Aligned_cols=88  Identities=20%  Similarity=0.143  Sum_probs=72.4

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||.+... .+..+++|.+..... .......+..|..++..++|++++++++.+.+. ..++++||+
T Consensus         4 ~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~   83 (363)
T cd05628           4 ESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFL   83 (363)
T ss_pred             eEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCC
Confidence            45678999999999999864 478899999875421 123345677888999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus        84 ~gg~L~~~l~~   94 (363)
T cd05628          84 PGGDMMTLLMK   94 (363)
T ss_pred             CCCcHHHHHHh
Confidence            99999988754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.38  E-value=9.1e-12  Score=79.75  Aligned_cols=85  Identities=22%  Similarity=0.208  Sum_probs=69.8

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..+.|+|++++.+.+... ..++++||+.+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            36899999999999864 578899999875321 123345677899999999999999999999888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|..++.+
T Consensus        81 ~L~~~l~~   88 (323)
T cd05571          81 ELFFHLSR   88 (323)
T ss_pred             cHHHHHHH
Confidence            99887654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=1.2e-11  Score=77.46  Aligned_cols=88  Identities=24%  Similarity=0.271  Sum_probs=75.6

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||.|++|.||++... .+..+++|.+....  ......+..|+.++..++|+|++++.+.+..+ ..++++||
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            4667788999999999999864 47789999987654  45566788999999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|..++.+
T Consensus        84 ~~~~~L~~~~~~   95 (280)
T cd06611          84 CDGGALDSIMLE   95 (280)
T ss_pred             cCCCcHHHHHHH
Confidence            999999888754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.37  E-value=8.6e-12  Score=79.89  Aligned_cols=85  Identities=21%  Similarity=0.207  Sum_probs=69.5

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++.+.+... ..++++||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36899999999999864 578899999875321 123445677899999999999999999999888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|..++.+
T Consensus        81 ~L~~~l~~   88 (323)
T cd05595          81 ELFFHLSR   88 (323)
T ss_pred             cHHHHHHH
Confidence            99877653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=9.1e-12  Score=79.37  Aligned_cols=83  Identities=20%  Similarity=0.202  Sum_probs=68.8

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||+|+||.||++... .+..+++|.+..... .......+.+|+.++..++|+|++++.+.+... ..++++||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            689999999999865 477899999875321 123445678899999999999999999999888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      ..++.+
T Consensus        81 ~~~l~~   86 (312)
T cd05585          81 FHHLQR   86 (312)
T ss_pred             HHHHHh
Confidence            887754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.37  E-value=9e-12  Score=79.56  Aligned_cols=85  Identities=24%  Similarity=0.217  Sum_probs=68.7

Q ss_pred             CccccCCCceEEEEEe----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           27 KTPRRGGFGAVYKGAL----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.||+|+||.||.+..    ..+..+++|.+............+..|+.++..++|+|++++++.+... ..++++||+.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5689999999998764    2467899999875432123344567788999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|..++.+
T Consensus        82 ~~~L~~~l~~   91 (318)
T cd05582          82 GGDLFTRLSK   91 (318)
T ss_pred             CCcHHHHHHH
Confidence            9999887653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.36  E-value=1.3e-11  Score=78.50  Aligned_cols=88  Identities=22%  Similarity=0.075  Sum_probs=72.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++.+..+ ..++++||+
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            345678999999999999864 467788888765421 33445688899999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++.+
T Consensus        82 ~~~~L~~~l~~   92 (308)
T cd06615          82 DGGSLDQVLKK   92 (308)
T ss_pred             CCCcHHHHHHh
Confidence            99999988754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.36  E-value=9.8e-12  Score=79.65  Aligned_cols=86  Identities=17%  Similarity=0.193  Sum_probs=70.4

Q ss_pred             hcCccccC--CCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           25 LGKTPRRG--GFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        25 ~~~~lg~g--~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.++||+|  +|+.||.+... .+..+++|.+............+.+|+.+++.++|+|++++++.+..+ ..++++||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45678999  67889998864 578899999876432234455677889999999999999999999998 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      ++|+|.+++.
T Consensus        82 ~~~~l~~~~~   91 (327)
T cd08227          82 AYGSAKDLIC   91 (327)
T ss_pred             CCCcHHHHHH
Confidence            9999988774

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.36  E-value=1.7e-11  Score=76.27  Aligned_cols=88  Identities=22%  Similarity=0.222  Sum_probs=73.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..+.|+|++++.+.+... ..++++|
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            34567888999999999999864 57789999887543  23344577889999999999999999999888 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|.+++.
T Consensus        87 ~~~~~~L~~~~~   98 (267)
T cd06646          87 YCGGGSLQDIYH   98 (267)
T ss_pred             CCCCCcHHHHHH
Confidence            999999988765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.35  E-value=8.5e-12  Score=77.37  Aligned_cols=88  Identities=27%  Similarity=0.308  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||.+...++..+++|.+....   .....+.+|+.++..++|+|++++++.+... ..++++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            3445678899999999999987667789999876543   3346788899999999999999999998888 89999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        83 ~~~~~L~~~l~~   94 (261)
T cd05072          83 MAKGSLLDFLKS   94 (261)
T ss_pred             CCCCcHHHHHHH
Confidence            999999988753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.35  E-value=1.8e-11  Score=78.62  Aligned_cols=85  Identities=22%  Similarity=0.198  Sum_probs=69.8

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..+.|+|++++.+.+... ..++|+||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            35899999999999864 578899999875421 123445678899999999999999999999888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|..++..
T Consensus        81 ~L~~~l~~   88 (328)
T cd05593          81 ELFFHLSR   88 (328)
T ss_pred             CHHHHHHh
Confidence            99877643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.35  E-value=1.4e-11  Score=76.98  Aligned_cols=91  Identities=30%  Similarity=0.405  Sum_probs=75.3

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ...+.+.+.||+|+||.||++....      +..+++|.+..... ......+.+|+.++..+.|+|++++++.+... .
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            4556778899999999999987522      46799998876432 23456788999999999999999999999988 9


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++++|.+++..
T Consensus        83 ~~lv~e~~~~~~L~~~i~~  101 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRS  101 (280)
T ss_pred             eEEEEecCCCCCHHHHHHh
Confidence            9999999999999988753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.35  E-value=1.9e-11  Score=76.09  Aligned_cols=89  Identities=29%  Similarity=0.386  Sum_probs=73.0

Q ss_pred             HhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .+.+.+.||+|+||.||++.+..    ...+++|.++.... ......+..|+.++..++|+|++++.+.+... ..+++
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            34567889999999999998632    34789998875432 34455688899999999999999999999888 89999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+++++|.+++..
T Consensus        84 ~e~~~~~~L~~~~~~   98 (266)
T cd05033          84 TEYMENGSLDKFLRE   98 (266)
T ss_pred             EEcCCCCCHHHHHHh
Confidence            999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.35  E-value=7.4e-12  Score=80.78  Aligned_cols=89  Identities=28%  Similarity=0.348  Sum_probs=71.7

Q ss_pred             HhHhcCccccCCCceEEEEEe------CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--e
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL------RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--V   92 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--~   92 (113)
                      .+.+.+.||+|+||.||++..      ..+..+++|.++.... ......+.+|+.++..+ +|+|++++++.+...  .
T Consensus         8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            456789999999999999973      2356799999875432 33455678899999998 689999999988765  7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|.++++.
T Consensus        87 ~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             eEEEEeccCCCcHHHHHHh
Confidence            8899999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.35  E-value=3.4e-11  Score=75.42  Aligned_cols=88  Identities=23%  Similarity=0.204  Sum_probs=73.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +...+.||+|+||.||++... .+..+++|.+..... ......+.+|+..+..++|+|++++++.+... ..++++||+
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            446678999999999999864 577899998765432 33456688899999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|..++.+
T Consensus        85 ~~~~l~~~i~~   95 (277)
T cd06641          85 GGGSALDLLEP   95 (277)
T ss_pred             CCCcHHHHHhc
Confidence            99999988754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.34  E-value=1.6e-11  Score=77.09  Aligned_cols=89  Identities=26%  Similarity=0.373  Sum_probs=73.0

Q ss_pred             HHhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ....+.+.||+|+||.||+|..     ..+..+++|.+..... ......+.+|+.++..+.|+|++++++.+... ..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            4456778899999999999974     1356789998875332 34456788899999999999999999999888 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+++++|.+++.
T Consensus        84 lv~e~~~~~~L~~~l~   99 (283)
T cd05090          84 MLFEYLNQGDLHEFLI   99 (283)
T ss_pred             EEEEcCCCCcHHHHHH
Confidence            9999999999988874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.34  E-value=2.2e-11  Score=76.54  Aligned_cols=91  Identities=19%  Similarity=0.093  Sum_probs=75.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.++..++|+|++++.+.+... ..++++
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            345667788999999999999864 477889998765321 33456788999999999999999999999998 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++++|..++.+
T Consensus        83 e~~~~~~L~~~~~~   96 (284)
T cd06620          83 EFMDCGSLDRIYKK   96 (284)
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999887654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.34  E-value=1.1e-11  Score=80.77  Aligned_cols=89  Identities=22%  Similarity=0.176  Sum_probs=72.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+... ..++++||
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey  124 (370)
T cd05596          45 FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEY  124 (370)
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcC
Confidence            345678999999999999864 477899999875321 122334567889999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|..++.+
T Consensus       125 ~~gg~L~~~l~~  136 (370)
T cd05596         125 MPGGDLVNLMSN  136 (370)
T ss_pred             CCCCcHHHHHHh
Confidence            999999988754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.34  E-value=1.3e-11  Score=76.62  Aligned_cols=88  Identities=28%  Similarity=0.281  Sum_probs=73.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecC
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYP  100 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~  100 (113)
                      ..+.+.+.||+|+||.||.+...++..+++|.+....   .....+.+|+.+++.++|+|++++++.......++++||+
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYM   82 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcC
Confidence            4556778899999999999987777889999987654   2234678899999999999999999886544889999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|.+++..
T Consensus        83 ~~~~L~~~~~~   93 (260)
T cd05067          83 ENGSLVDFLKT   93 (260)
T ss_pred             CCCCHHHHHHh
Confidence            99999887653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.34  E-value=1.1e-11  Score=76.87  Aligned_cols=87  Identities=28%  Similarity=0.324  Sum_probs=73.4

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.+.||+|++|.||++....+..+++|.+....   .....+.+|+.++..++|+|++++++.+... ..++++||+
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            455678899999999999987666779999987643   2345678899999999999999999998888 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++.+
T Consensus        84 ~~~~L~~~~~~   94 (261)
T cd05068          84 KYGSLLEYLQG   94 (261)
T ss_pred             cCCcHHHHHhc
Confidence            99999988754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.33  E-value=4.8e-11  Score=74.72  Aligned_cols=87  Identities=24%  Similarity=0.229  Sum_probs=73.0

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ...+.||.|+||.||.+... .+..+++|.+..... ......+.+|+.++..+.|+|++++.+.+.+. ..++++||++
T Consensus         7 ~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06640           7 TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             hhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence            34567999999999999864 477899998875432 34456788899999999999999999999998 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        86 ~~~L~~~i~~   95 (277)
T cd06640          86 GGSALDLLRA   95 (277)
T ss_pred             CCcHHHHHhc
Confidence            9999988764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.33  E-value=2.6e-11  Score=75.57  Aligned_cols=83  Identities=25%  Similarity=0.356  Sum_probs=66.8

Q ss_pred             ccccCCCceEEEEEeCC---CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           28 TPRRGGFGAVYKGALRD---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      .||+|+||.||.|....   ...+++|.+..... ......+.+|+..+..++|+|++++++.+... ..++++||+.+|
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            58999999999986422   34678887654321 34455678899999999999999999999888 899999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++.+
T Consensus        81 ~L~~~l~~   88 (269)
T cd05042          81 DLKNYLRS   88 (269)
T ss_pred             cHHHHHHh
Confidence            99988754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.33  E-value=9.3e-12  Score=80.59  Aligned_cols=89  Identities=27%  Similarity=0.158  Sum_probs=74.4

Q ss_pred             HhcCccccCCCceEEEEEeCC-CcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||.|..|.||.+..++ +..+|+|++..... ..+...+..-|..++..++||.++.|++..... ..+++||||
T Consensus        80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyC  159 (459)
T KOG0610|consen   80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYC  159 (459)
T ss_pred             HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecC
Confidence            345779999999999998764 57899999986543 133445567788899999999999999999999 999999999


Q ss_pred             CCCChhhhccCC
Q 044522          101 CNGSLDHNLCGP  112 (113)
Q Consensus       101 ~~g~L~~~l~~~  112 (113)
                      +||+|..++++.
T Consensus       160 pGGdL~~LrqkQ  171 (459)
T KOG0610|consen  160 PGGDLHSLRQKQ  171 (459)
T ss_pred             CCccHHHHHhhC
Confidence            999999887764

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=1.3e-11  Score=79.28  Aligned_cols=89  Identities=25%  Similarity=0.207  Sum_probs=72.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|..++..++|++++.+++.+... ..++++||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (331)
T cd05597           3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDY   82 (331)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEec
Confidence            345678999999999999864 478899999875321 122344577888888899999999999999988 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|..++.+
T Consensus        83 ~~g~~L~~~l~~   94 (331)
T cd05597          83 YVGGDLLTLLSK   94 (331)
T ss_pred             CCCCcHHHHHHH
Confidence            999999988753

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.33  E-value=1.6e-12  Score=81.55  Aligned_cols=83  Identities=24%  Similarity=0.230  Sum_probs=68.6

Q ss_pred             cCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      ..++|+|++|.|++|..++ |..||||.+.....+..--+-..+|+.+++.+.|+|+|.+..++... .+++|+||+...
T Consensus         7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhT   86 (396)
T KOG0593|consen    7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHT   86 (396)
T ss_pred             hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchH
Confidence            4569999999999999764 88899999876553222334468999999999999999999999998 999999999886


Q ss_pred             Chhhh
Q 044522          104 SLDHN  108 (113)
Q Consensus       104 ~L~~~  108 (113)
                      -|.++
T Consensus        87 vL~eL   91 (396)
T KOG0593|consen   87 VLHEL   91 (396)
T ss_pred             HHHHH
Confidence            66654

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.33  E-value=2.9e-11  Score=74.92  Aligned_cols=84  Identities=25%  Similarity=0.366  Sum_probs=68.7

Q ss_pred             ccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCCC
Q 044522           28 TPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGS  104 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g~  104 (113)
                      .||+|+||.||+|.+.   .+..+++|.+............+..|+.++..+.|+|++++++.+.....++++||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            5899999999999752   3677999988654432445667889999999999999999999886557789999999999


Q ss_pred             hhhhccC
Q 044522          105 LDHNLCG  111 (113)
Q Consensus       105 L~~~l~~  111 (113)
                      |.+++.+
T Consensus        82 L~~~l~~   88 (257)
T cd05116          82 LNKFLQK   88 (257)
T ss_pred             HHHHHHh
Confidence            9888754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.33  E-value=1.1e-11  Score=76.90  Aligned_cols=87  Identities=32%  Similarity=0.348  Sum_probs=72.3

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.+.||+|+||.||.+.+.++..+++|.+....   .....+.+|+..+..++|+|++++++++... ..++++||+
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence            345678899999999999987666679999887543   2235688899999999999999999999888 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++..
T Consensus        82 ~~~~l~~~i~~   92 (256)
T cd05113          82 SNGCLLNYLRE   92 (256)
T ss_pred             CCCcHHHHHHh
Confidence            99999888753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.33  E-value=2.6e-11  Score=75.35  Aligned_cols=88  Identities=24%  Similarity=0.426  Sum_probs=72.8

Q ss_pred             HhcCccccCCCceEEEEEeCCCcEEEEEEeeccch----hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSA----CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ...+.||.|+||.||++....+..+++|.+.....    .......+.+|+..+..++|+|++++.+.+... ..++++|
T Consensus         3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (265)
T cd06631           3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFME   82 (265)
T ss_pred             cccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEe
Confidence            45778999999999999876678899998764321    122345678899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++++|.+++.+
T Consensus        83 ~~~~~~L~~~l~~   95 (265)
T cd06631          83 FVPGGSISSILNR   95 (265)
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999988754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.33  E-value=1.7e-11  Score=79.60  Aligned_cols=87  Identities=20%  Similarity=0.156  Sum_probs=71.8

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.||+|+||.||.+... .+..+++|.++.... .......+..|..++..++|++++++++.+.+. ..++++||++
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~   84 (360)
T cd05627           5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP   84 (360)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence            4577999999999999864 478899999875321 123345677888999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|.+++.+
T Consensus        85 gg~L~~~l~~   94 (360)
T cd05627          85 GGDMMTLLMK   94 (360)
T ss_pred             CccHHHHHHh
Confidence            9999988754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.33  E-value=1.6e-11  Score=80.08  Aligned_cols=89  Identities=21%  Similarity=0.188  Sum_probs=71.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+... ..++++||
T Consensus        45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey  124 (370)
T cd05621          45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEY  124 (370)
T ss_pred             CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcC
Confidence            345678999999999999875 477899999864321 122344577888999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|.+++.+
T Consensus       125 ~~gg~L~~~l~~  136 (370)
T cd05621         125 MPGGDLVNLMSN  136 (370)
T ss_pred             CCCCcHHHHHHh
Confidence            999999988754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PHA02988 hypothetical protein; Provisional

Probab=99.33  E-value=2.1e-11  Score=76.84  Aligned_cols=84  Identities=17%  Similarity=0.213  Sum_probs=69.4

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEEEEecC
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLLVYGYP  100 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~lv~e~~  100 (113)
                      ..+++|+++.||+|.+ .+..+++|.+...... ......+.+|+.++..++|+|++++++++.+    . ..++++||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            4589999999999987 4678999998754321 2224667899999999999999999999877    3 688999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus       105 ~~g~L~~~l~~  115 (283)
T PHA02988        105 TRGYLREVLDK  115 (283)
T ss_pred             CCCcHHHHHhh
Confidence            99999998765

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.32  E-value=2.9e-11  Score=74.64  Aligned_cols=88  Identities=30%  Similarity=0.313  Sum_probs=73.2

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch---hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA---CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ...+.||+|++|.||++... .+..+++|.+.....   ..+..+.+.+|+.+++.++|+|++++.+.+... ..++++|
T Consensus         3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (258)
T cd06632           3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE   82 (258)
T ss_pred             cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence            35678999999999999875 578899998865321   123456788999999999999999999999888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++++|.+++.+
T Consensus        83 ~~~~~~L~~~~~~   95 (258)
T cd06632          83 LVPGGSLAKLLKK   95 (258)
T ss_pred             ecCCCcHHHHHHh
Confidence            9999999988754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.32  E-value=3.1e-11  Score=75.71  Aligned_cols=86  Identities=33%  Similarity=0.368  Sum_probs=70.6

Q ss_pred             HhcCccccCCCceEEEEEeC-----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLL   95 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~l   95 (113)
                      .+.+.||+|+||.||.+...     .+..+++|.+....  ......+.+|+.++..+.|+|++++.+.+...   ..++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           7 KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             eeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            45678999999999998742     36789999987654  45566788999999999999999999887543   6889


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++.+
T Consensus        85 v~e~~~~~~L~~~l~~  100 (284)
T cd05081          85 VMEYLPYGSLRDYLQK  100 (284)
T ss_pred             EEEecCCCCHHHHHHh
Confidence            9999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.32  E-value=3e-11  Score=77.43  Aligned_cols=85  Identities=22%  Similarity=0.218  Sum_probs=68.9

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+..|+.++..+.|+|++++.+.+... ..++|+||+.+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            36899999999998864 578899999875321 123345567888889999999999999998888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|..++.+
T Consensus        81 ~L~~~l~~   88 (325)
T cd05594          81 ELFFHLSR   88 (325)
T ss_pred             cHHHHHHh
Confidence            99877653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.32  E-value=1.7e-11  Score=78.81  Aligned_cols=89  Identities=20%  Similarity=0.160  Sum_probs=72.0

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|..++..+.|++++.+.+.+... ..++++||
T Consensus         3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey   82 (331)
T cd05624           3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY   82 (331)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            345678999999999999865 477899999875321 122344577788888899999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|..++.+
T Consensus        83 ~~gg~L~~~l~~   94 (331)
T cd05624          83 YVGGDLLTLLSK   94 (331)
T ss_pred             CCCCcHHHHHHH
Confidence            999999988754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.32  E-value=2.8e-11  Score=75.39  Aligned_cols=89  Identities=29%  Similarity=0.354  Sum_probs=72.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-C---CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-D---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .+.+.+.||+|+||.||++... .   ...+++|.+..... ......+.+|+.++..+.|+|++++.+.+... ..+++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            3456788999999999999753 1   33688888765432 34456788899999999999999999999888 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+++++|.+++.+
T Consensus        84 ~e~~~~~~L~~~~~~   98 (267)
T cd05066          84 TEYMENGSLDAFLRK   98 (267)
T ss_pred             EEcCCCCCHHHHHHh
Confidence            999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.32  E-value=3e-11  Score=77.57  Aligned_cols=85  Identities=19%  Similarity=0.175  Sum_probs=68.4

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||.+... .+..+++|.++.... .......+..|..++..+ +|+|++++++.+... ..++++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36899999999999864 478899999875421 122345577888888877 799999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~~~~   89 (329)
T cd05588          81 GDLMFHMQR   89 (329)
T ss_pred             CCHHHHHHH
Confidence            999877643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=1.6e-11  Score=77.30  Aligned_cols=87  Identities=22%  Similarity=0.240  Sum_probs=70.3

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      ...+.||+|+||.||++... .+..+++|.+...... ......+.+|+.++..++|+|++++.+.+..+ ..++++||+
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05605           3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             eEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEecc
Confidence            34577999999999999864 5788999998754321 12234467899999999999999999999888 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      .+|+|..++.
T Consensus        83 ~~~~L~~~~~   92 (285)
T cd05605          83 NGGDLKFHIY   92 (285)
T ss_pred             CCCcHHHHHH
Confidence            9999987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.32  E-value=3.3e-11  Score=75.05  Aligned_cols=84  Identities=20%  Similarity=0.190  Sum_probs=71.8

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      ...||+|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+|++++++.+..+ ..++++||++++
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   90 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG   90 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence            346999999999999864 46779999887654  45566788999999999999999999999988 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|..++.+
T Consensus        91 ~L~~~l~~   98 (268)
T cd06624          91 SLSALLRS   98 (268)
T ss_pred             CHHHHHHH
Confidence            99988764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.32  E-value=2.3e-11  Score=75.39  Aligned_cols=88  Identities=30%  Similarity=0.349  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||++...++..+++|.+....   .....+.+|+..+..++|+|++++++.+... ..++++||
T Consensus         6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc---cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            3455678899999999999987666779999887643   2235678899999999999999999999887 89999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        83 ~~~~~L~~~i~~   94 (261)
T cd05034          83 MSKGSLLDFLKS   94 (261)
T ss_pred             cCCCCHHHHHhc
Confidence            999999988754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.32  E-value=5e-11  Score=74.15  Aligned_cols=88  Identities=19%  Similarity=0.222  Sum_probs=73.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.++...  ......+.+|+.++..++|+|++++.+.+... ..++++|
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            45667788999999999999864 47789999887654  34445577888999999999999999999888 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|.+++.
T Consensus        87 ~~~~~~L~~~~~   98 (267)
T cd06645          87 FCGGGSLQDIYH   98 (267)
T ss_pred             ccCCCcHHHHHH
Confidence            999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.32  E-value=2e-11  Score=75.31  Aligned_cols=88  Identities=20%  Similarity=0.248  Sum_probs=73.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|.++.+|++... .+..+++|.+............+.+|+.+++.++|+|++++++.+... ..++++||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08529           3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAE   82 (256)
T ss_pred             eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCC
Confidence            35677999999999999864 478899998875433245566788999999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        83 ~~~L~~~l~~   92 (256)
T cd08529          83 NGDLHKLLKM   92 (256)
T ss_pred             CCcHHHHHHH
Confidence            9999988754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.31  E-value=1.9e-11  Score=82.19  Aligned_cols=86  Identities=20%  Similarity=0.145  Sum_probs=71.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-C-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-D-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||.+... . +..+++|.+....  ......+.+|+.++..++|+|++++++.+... ..++++||
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            567788999999999999753 3 5678888765543  34445677899999999999999999999988 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++|+|.+++.
T Consensus       147 ~~gg~L~~~l~  157 (478)
T PTZ00267        147 GSGGDLNKQIK  157 (478)
T ss_pred             CCCCCHHHHHH
Confidence            99999987664

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.31  E-value=2.2e-11  Score=79.44  Aligned_cols=91  Identities=21%  Similarity=0.164  Sum_probs=73.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|..++..++|+|++++++.+... ..++++
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            34556788999999999999875 477899999864321 122344567888899999999999999999888 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++|+|..++.+
T Consensus       123 Ey~~gg~L~~~~~~  136 (371)
T cd05622         123 EYMPGGDLVNLMSN  136 (371)
T ss_pred             cCCCCCcHHHHHHh
Confidence            99999999987754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.31  E-value=9.6e-12  Score=84.50  Aligned_cols=91  Identities=24%  Similarity=0.270  Sum_probs=73.5

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .....+..+||+|+||+|+.+..+ .+..+|||.++.... ..........|.+++... .||.++.++..+... +++.
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            344456789999999999999875 477899999987642 345566777777777766 599999999999888 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ||||+.||++..+++
T Consensus       447 vmey~~Ggdm~~~~~  461 (694)
T KOG0694|consen  447 VMEYVAGGDLMHHIH  461 (694)
T ss_pred             EEEecCCCcEEEEEe
Confidence            999999999665554

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.30  E-value=1.4e-11  Score=81.14  Aligned_cols=88  Identities=24%  Similarity=0.198  Sum_probs=71.7

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHH-------H-----HHHHHHHHHHHhhCCCCccceeee
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQ-------A-----AFQFISEDEILSCAQHRSLVVLVG   86 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~-------~-----~~~~~~e~~~~~~~~h~~i~~l~~   86 (113)
                      +.+|.+.+.||+|+||.|..+... .+..+|+|.++......+       .     .+.+.+|+.+|+.+.|+|+|+|+.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            346677899999999999999853 588999999976432111       1     246789999999999999999999


Q ss_pred             EEEec---eEEEEEecCCCCChhh
Q 044522           87 YCIEI---VWLLVYGYPCNGSLDH  107 (113)
Q Consensus        87 ~~~~~---~~~lv~e~~~~g~L~~  107 (113)
                      +..++   .+|+|+||+..|.+..
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w  199 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKW  199 (576)
T ss_pred             eecCcccCceEEEEEeccCCcccc
Confidence            99887   7999999999988654

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.30  E-value=2.2e-11  Score=76.70  Aligned_cols=87  Identities=22%  Similarity=0.232  Sum_probs=70.2

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      ...+.||+|+||.||++... .+..+++|.+...... ......+.+|+.++..++|++++.+.+.+... ..++++||+
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05631           3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence            34577999999999999864 5788999988754311 12234567899999999999999999999888 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      ++|+|..++.
T Consensus        83 ~~g~L~~~~~   92 (285)
T cd05631          83 NGGDLKFHIY   92 (285)
T ss_pred             CCCcHHHHHH
Confidence            9999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=1.3e-11  Score=80.61  Aligned_cols=92  Identities=17%  Similarity=0.114  Sum_probs=78.4

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .....|.+.++||.|.-+.||.+.. +.+..|+||.++...- ......+.+|+..|+.++|||++.++-.+... .+++
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc-~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC-NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh-hhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence            3445677889999999999999985 4578999999987542 23467889999999999999999999988888 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ||.||.+|++.+.++
T Consensus       102 VmpfMa~GS~ldIik  116 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIK  116 (516)
T ss_pred             eehhhcCCcHHHHHH
Confidence            999999999998775

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.30  E-value=7.3e-11  Score=74.43  Aligned_cols=88  Identities=23%  Similarity=0.268  Sum_probs=74.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||.|+||.||++... .+..+++|.+....  ......+.+|+..+..+.|+|++++.+.+... ..++++|
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            34567788999999999999864 47789999987654  45567788899999999999999999998888 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|..++.
T Consensus        90 ~~~~~~l~~~~~  101 (292)
T cd06644          90 FCPGGAVDAIML  101 (292)
T ss_pred             cCCCCcHHHHHH
Confidence            999999877654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.30  E-value=2.7e-11  Score=75.04  Aligned_cols=86  Identities=30%  Similarity=0.350  Sum_probs=71.2

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ..+.+.||+|+||.||.+.+..+..+++|.+....   .....+.+|+.++..++|+|++++.+.+... ..++++||++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             cchhhhhccCCCceEEEeEecCCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            45678899999999999987666678999876543   1223577789999999999999999998888 8999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        83 ~~~L~~~l~~   92 (256)
T cd05059          83 NGCLLNYLRE   92 (256)
T ss_pred             CCCHHHHHHh
Confidence            9999988753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.30  E-value=2.4e-11  Score=76.77  Aligned_cols=89  Identities=25%  Similarity=0.321  Sum_probs=71.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC---------------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceee
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD---------------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV   85 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~---------------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~   85 (113)
                      ..+.+.+.||+|+||.||.+....               ...+++|.++.... ......+.+|+.++..++|+|+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            455677889999999999876421               22478998875431 34455688999999999999999999


Q ss_pred             eEEEec-eEEEEEecCCCCChhhhcc
Q 044522           86 GYCIEI-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        86 ~~~~~~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      +.+... ..++++||+.+++|.+++.
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~  109 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLS  109 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHH
Confidence            999888 9999999999999988764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.30  E-value=1.6e-12  Score=88.45  Aligned_cols=86  Identities=31%  Similarity=0.421  Sum_probs=71.8

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEEEEE
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWLLVY   97 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~lv~   97 (113)
                      .+.||+|+||.||+|..+ .|..+|+|..+.... ......+.+|+.+++.++|+|||++.++-...       ...+++
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            577999999999999965 589999999887442 34556788999999999999999998876542       567899


Q ss_pred             ecCCCCChhhhccCC
Q 044522           98 GYPCNGSLDHNLCGP  112 (113)
Q Consensus        98 e~~~~g~L~~~l~~~  112 (113)
                      ||+.+|+|...+++.
T Consensus        97 EyC~gGsL~~~L~~P  111 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSP  111 (732)
T ss_pred             eecCCCcHHHHhcCc
Confidence            999999999988764

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.30  E-value=2.6e-11  Score=77.38  Aligned_cols=90  Identities=22%  Similarity=0.318  Sum_probs=71.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~l   95 (113)
                      ..+...+.||+|+||.||++.+. .+.    .+++|.+..... ......+.+|+.++..+.|+|++++++.+.....++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCcee
Confidence            34556788999999999999853 232    488998865431 345567888999999999999999999998776778


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++.+
T Consensus        86 v~e~~~~g~l~~~l~~  101 (316)
T cd05108          86 ITQLMPFGCLLDYVRE  101 (316)
T ss_pred             eeecCCCCCHHHHHHh
Confidence            9999999999887764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.30  E-value=3.5e-11  Score=74.94  Aligned_cols=89  Identities=26%  Similarity=0.365  Sum_probs=73.1

Q ss_pred             HhHhcCccccCCCceEEEEEeCC-C---cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD-G---QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~-~---~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .+.+.+.||+|+||.||++.... +   ..+++|.+..... ......+..|+.++..+.|+|++++.+.+... ..+++
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            34567889999999999998632 2   3689998875421 44566789999999999999999999999888 89999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+++++|..++..
T Consensus        84 ~e~~~~~~L~~~l~~   98 (269)
T cd05065          84 TEFMENGALDSFLRQ   98 (269)
T ss_pred             EecCCCCcHHHHHhh
Confidence            999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.30  E-value=3.8e-11  Score=76.01  Aligned_cols=88  Identities=19%  Similarity=0.189  Sum_probs=73.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.+|+|++|.||++... .+..+++|.+....  ......+.+|+.++..+.|+|++++.+.+... ..++++||
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            3445677999999999999864 57789999887654  33456688899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        99 ~~~~~L~~~~~~  110 (296)
T cd06654          99 LAGGSLTDVVTE  110 (296)
T ss_pred             cCCCCHHHHHHh
Confidence            999999988754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.30  E-value=3.7e-11  Score=75.66  Aligned_cols=89  Identities=31%  Similarity=0.423  Sum_probs=73.1

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      +..+.+.+.+|+|+||.||.+...      .+..+++|.+....  ......+.+|+.++..+.|++++++.+.+... .
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   81 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            445567888999999999998641      23458888877543  34556788999999999999999999999888 9


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+++++|.+++.
T Consensus        82 ~~lv~e~~~~~~L~~~i~   99 (288)
T cd05093          82 LIMVFEYMKHGDLNKFLR   99 (288)
T ss_pred             cEEEEEcCCCCCHHHHHH
Confidence            999999999999988875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=1e-11  Score=80.12  Aligned_cols=89  Identities=26%  Similarity=0.197  Sum_probs=73.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... .......+..|+.++..+.|+|++++++.+.+. ..++|+||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY   82 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence            345678999999999999865 578899999875431 113445678899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        83 ~~~~~L~~~l~~   94 (350)
T cd05573          83 MPGGDLMNLLIR   94 (350)
T ss_pred             CCCCCHHHHHHH
Confidence            999999988754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.30  E-value=3.5e-11  Score=75.75  Aligned_cols=90  Identities=26%  Similarity=0.327  Sum_probs=71.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ..+.+.+.||+|+||.||+|...      .+..+++|.+..... ......+.+|+..+..++|+|++++++.+... ..
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            34556788999999999998642      134689998764432 23344577888999999999999999998888 89


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++|+|.+++++
T Consensus        85 ~lv~e~~~~g~L~~~l~~  102 (288)
T cd05061          85 LVVMELMAHGDLKSYLRS  102 (288)
T ss_pred             EEEEeCCCCCCHHHHHHH
Confidence            999999999999998853

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.30  E-value=5.5e-11  Score=73.70  Aligned_cols=89  Identities=22%  Similarity=0.304  Sum_probs=75.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+|+.+|++... .+..+++|.+............+.+|+.++..++|+|++++.+..... ..++++||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            345688999999999999864 577899999876543234667788999999999999999999998888 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++.+
T Consensus        82 ~~~~L~~~~~~   92 (264)
T cd06626          82 SGGTLEELLEH   92 (264)
T ss_pred             CCCcHHHHHhh
Confidence            99999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.29  E-value=3.8e-11  Score=76.92  Aligned_cols=85  Identities=24%  Similarity=0.285  Sum_probs=68.4

Q ss_pred             CccccCCCceEEEEEe----CCCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           27 KTPRRGGFGAVYKGAL----RDGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~----~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.||+|+||.||++..    ..+..+++|.+.....  .......+..|+.++..++|+|++++++.+... ..++++||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5699999999999874    2367899999875321  112334567889999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+++|..++.+
T Consensus        82 ~~~~~L~~~~~~   93 (323)
T cd05584          82 LSGGELFMHLER   93 (323)
T ss_pred             CCCchHHHHHHH
Confidence            999999887653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.29  E-value=2.3e-11  Score=77.99  Aligned_cols=89  Identities=24%  Similarity=0.175  Sum_probs=72.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.++.... .......+.+|+.++..+.|++++++.+.+... ..++++||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEY   82 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECC
Confidence            345678999999999999864 578899999875431 123445577888899999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|..++.+
T Consensus        83 ~~~~~L~~~l~~   94 (330)
T cd05601          83 QPGGDLLSLLNR   94 (330)
T ss_pred             CCCCCHHHHHHH
Confidence            999999988754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.29  E-value=1e-10  Score=73.40  Aligned_cols=85  Identities=21%  Similarity=0.305  Sum_probs=71.5

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||.|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+|++++.+.+... ..++++||++
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            45677999999999999865 36678888886544  45566788899999999999999999999888 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      +++|..++.
T Consensus        86 ~~~l~~~~~   94 (282)
T cd06643          86 GGAVDAVML   94 (282)
T ss_pred             CCcHHHHHH
Confidence            999987764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.29  E-value=6.3e-11  Score=75.03  Aligned_cols=89  Identities=20%  Similarity=0.179  Sum_probs=74.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|++|.||++... .+..+++|.+....  ......+.+|+.+++.++|+|++++.+.+... ..++++|
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            34456788999999999999863 57889999987644  23445678888999999999999999999888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++++|.+++.+
T Consensus        97 ~~~~~~L~~~~~~  109 (297)
T cd06656          97 YLAGGSLTDVVTE  109 (297)
T ss_pred             ccCCCCHHHHHHh
Confidence            9999999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.29  E-value=8.2e-12  Score=77.45  Aligned_cols=83  Identities=25%  Similarity=0.334  Sum_probs=66.6

Q ss_pred             CccccCCCceEEEEEeCC--------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           27 KTPRRGGFGAVYKGALRD--------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~--------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +.||+|+||.||++....        ...+++|.+....  ......+..++.++..+.|+|++.+++.+..+ ..++++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence            468999999999997532        2236667665433  34456678888999999999999999999988 899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++|+|..+++.
T Consensus        79 e~~~~g~L~~~l~~   92 (258)
T cd05078          79 EYVKFGSLDTYLKK   92 (258)
T ss_pred             ecCCCCcHHHHHhc
Confidence            99999999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.29  E-value=6.7e-11  Score=73.44  Aligned_cols=83  Identities=27%  Similarity=0.387  Sum_probs=67.2

Q ss_pred             ccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCCC
Q 044522           28 TPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGS  104 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g~  104 (113)
                      .||+|+||.||.|.+.   .+..+++|.+..... ......+.+|+.++..++|+|++++.+.+.....++++||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCC
Confidence            4899999999999753   245689998875432 334566889999999999999999999886558889999999999


Q ss_pred             hhhhccC
Q 044522          105 LDHNLCG  111 (113)
Q Consensus       105 L~~~l~~  111 (113)
                      |.+++..
T Consensus        81 L~~~l~~   87 (257)
T cd05115          81 LNKFLSG   87 (257)
T ss_pred             HHHHHHh
Confidence            9988753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.29  E-value=7.3e-12  Score=82.08  Aligned_cols=92  Identities=18%  Similarity=0.165  Sum_probs=76.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~   97 (113)
                      ..|...+++|+|+||.++....+ +...+++|.++.............+|+.+++.+.|||++.+.+.+...  ..+|+|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            34567789999999999877654 467899999988765445555778999999999999999999888776  599999


Q ss_pred             ecCCCCChhhhccCC
Q 044522           98 GYPCNGSLDHNLCGP  112 (113)
Q Consensus        98 e~~~~g~L~~~l~~~  112 (113)
                      +|++||++.+.|.+.
T Consensus        84 ~Y~eGg~l~~~i~~~   98 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQ   98 (426)
T ss_pred             eecCCCCHHHHHHHH
Confidence            999999999887654

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.29  E-value=4.7e-11  Score=74.31  Aligned_cols=87  Identities=29%  Similarity=0.410  Sum_probs=69.8

Q ss_pred             HhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e------
Q 044522           24 TLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V------   92 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~------   92 (113)
                      .+.+.||+|+||.||.+....    +..+++|.+............+.+|+..+..++|+|++++++.+... .      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            467889999999999997532    35799998876433244556788999999999999999999988654 3      


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+++|+|..++.
T Consensus        82 ~~~v~e~~~~~~l~~~l~   99 (273)
T cd05035          82 PMVILPFMKHGDLHSFLL   99 (273)
T ss_pred             cEEEEeccCCCCHHHHHH
Confidence            789999999999987763

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.29  E-value=7.1e-11  Score=73.01  Aligned_cols=88  Identities=18%  Similarity=0.208  Sum_probs=73.1

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ...+.||.|+||.++..... .+..+++|.+............+.+|+.+++.++|+|++++++.+... ..++++||++
T Consensus         3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~   82 (256)
T cd08221           3 IPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYAN   82 (256)
T ss_pred             eEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecC
Confidence            45678999999999887753 477899998775433245566788999999999999999999999988 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        83 ~~~L~~~~~~   92 (256)
T cd08221          83 GGTLYDKIVR   92 (256)
T ss_pred             CCcHHHHHHh
Confidence            9999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.28  E-value=5.6e-11  Score=73.52  Aligned_cols=87  Identities=37%  Similarity=0.464  Sum_probs=74.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||.|+||.||.+... +..+++|.+....   ...+++.+|+.++..++|+|++++++.+... ..++++||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDS---TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccch---hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            34567788999999999999864 6789999987653   2566788999999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        82 ~~~~~L~~~~~~   93 (256)
T cd05039          82 MAKGSLVDYLRS   93 (256)
T ss_pred             cCCCcHHHHHHh
Confidence            999999988753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.28  E-value=6e-11  Score=74.01  Aligned_cols=83  Identities=25%  Similarity=0.387  Sum_probs=65.9

Q ss_pred             ccccCCCceEEEEEeCC---CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           28 TPRRGGFGAVYKGALRD---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      .||+|+||.||++....   ...+++|.+..... ......+.+|+..++.++|+|++++++.+... ..++++||+.+|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            58999999999987432   23456666554321 23456788899999999999999999999988 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|..++++
T Consensus        81 ~L~~~l~~   88 (268)
T cd05086          81 DLKSYLSQ   88 (268)
T ss_pred             cHHHHHHh
Confidence            99988764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.28  E-value=1.1e-11  Score=78.73  Aligned_cols=93  Identities=18%  Similarity=0.185  Sum_probs=73.0

Q ss_pred             hhHHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---e
Q 044522           17 PCKIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---V   92 (113)
Q Consensus        17 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~   92 (113)
                      ...+..+...+.|++|+||.||++... .+..||+|.++.........-...+|+.++...+|+|||.+..+....   .
T Consensus        72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~  151 (419)
T KOG0663|consen   72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK  151 (419)
T ss_pred             cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence            334455667788999999999999974 477899999986542223345567999999999999999998888765   8


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      +|+||||++. +|..+|.
T Consensus       152 iy~VMe~~Eh-DLksl~d  168 (419)
T KOG0663|consen  152 IYIVMEYVEH-DLKSLME  168 (419)
T ss_pred             eeeeHHHHHh-hHHHHHH
Confidence            9999999985 6666554

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.28  E-value=4.1e-11  Score=74.37  Aligned_cols=88  Identities=25%  Similarity=0.328  Sum_probs=73.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|++|.||++... .+..+++|.++... ........+.+|+.++..+.|++++++++.+... ..++++||
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   83 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence            456788999999999999875 57889999886432 1133456788999999999999999999999888 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++++|..++.
T Consensus        84 ~~~~~L~~~l~   94 (267)
T cd08224          84 ADAGDLSRMIK   94 (267)
T ss_pred             CCCCCHHHHHH
Confidence            99999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.28  E-value=2.7e-11  Score=77.06  Aligned_cols=89  Identities=26%  Similarity=0.330  Sum_probs=73.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv   96 (113)
                      .....++.||+|+||.||.+... .+...|+|.+....  ....+.+.+|+.++..++|+|+|+.+|.....   ...+.
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~--~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED--SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc--chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence            44566889999999999999865 37889999987653  22366788999999999999999999974433   58899


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+++|+|.+++.+
T Consensus        95 mEy~~~GsL~~~~~~  109 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKR  109 (313)
T ss_pred             eeccCCCcHHHHHHH
Confidence            999999999998765

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.28  E-value=2.8e-11  Score=75.27  Aligned_cols=87  Identities=28%  Similarity=0.326  Sum_probs=71.1

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPC  101 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~  101 (113)
                      .+.+.+.||+|+||.||++...+...+++|.+....   .....+.+|+.++..++|+|++++.+.......++++||++
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            456788899999999999987655679999887543   22346788999999999999999998775447889999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|.+++.+
T Consensus        84 ~~~L~~~~~~   93 (262)
T cd05071          84 KGSLLDFLKG   93 (262)
T ss_pred             CCcHHHHHhh
Confidence            9999988764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.28  E-value=7.2e-11  Score=74.16  Aligned_cols=81  Identities=23%  Similarity=0.223  Sum_probs=66.2

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||+|+||.||.+... .+..+++|.+...... ......+..|+.++..++|++++++.+.+... ..++++||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            689999999999864 5778999998754311 12334567889999999999999999988888 89999999999999


Q ss_pred             hhhc
Q 044522          106 DHNL  109 (113)
Q Consensus       106 ~~~l  109 (113)
                      ..++
T Consensus        81 ~~~~   84 (280)
T cd05608          81 RYHI   84 (280)
T ss_pred             HHHH
Confidence            8765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.28  E-value=3.9e-11  Score=75.09  Aligned_cols=89  Identities=24%  Similarity=0.208  Sum_probs=72.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+...+.||+|.||.||++... .+..+++|.+..... ......+.+|+..++.+.|+|++++.+.+... ..++++||
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            3445677999999999999864 467899998875432 23455688999999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++..
T Consensus        84 ~~~~~L~~~~~~   95 (277)
T cd06642          84 LGGGSALDLLKP   95 (277)
T ss_pred             cCCCcHHHHhhc
Confidence            999999887653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.28  E-value=6.3e-11  Score=74.15  Aligned_cols=89  Identities=21%  Similarity=0.340  Sum_probs=71.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||.+...      .+..+++|.+..... ......+.+|+.++..++|+|++++++.+... ..+
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~   85 (277)
T cd05062           7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   85 (277)
T ss_pred             HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence            3456788999999999998742      245689998764331 23455688899999999999999999999888 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+++|+|.+++.+
T Consensus        86 lv~e~~~~~~L~~~~~~  102 (277)
T cd05062          86 VIMELMTRGDLKSYLRS  102 (277)
T ss_pred             EEEecCCCCCHHHHHHH
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.28  E-value=5.7e-11  Score=73.97  Aligned_cols=83  Identities=20%  Similarity=0.304  Sum_probs=66.0

Q ss_pred             CccccCCCceEEEEEeCC-------------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           27 KTPRRGGFGAVYKGALRD-------------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~-------------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      +.||+|+||.||+|.+..             ...+++|.+....  ......+.+++.++..+.|+|++++++++... .
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            468999999999997421             2247788766543  34445678888899999999999999999888 8


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|..++.+
T Consensus        79 ~~lv~e~~~~~~l~~~~~~   97 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHR   97 (262)
T ss_pred             CEEEEecccCCCHHHHHHh
Confidence            8999999999998877653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.28  E-value=8.3e-11  Score=75.58  Aligned_cols=85  Identities=20%  Similarity=0.170  Sum_probs=67.4

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+..|..++..+ +|+|++++++++... ..++++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            36899999999999865 477899999875321 123345567777777666 799999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 ~~L~~~~~~   89 (329)
T cd05618          81 GDLMFHMQR   89 (329)
T ss_pred             CCHHHHHHH
Confidence            999877643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.27  E-value=4.2e-11  Score=76.95  Aligned_cols=89  Identities=22%  Similarity=0.185  Sum_probs=71.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+..... .......+..|..++..+.|++++.+.+.+.+. ..++++||
T Consensus         3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey   82 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDY   82 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEec
Confidence            345678999999999999875 467899999864321 122334467788888899999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++.+
T Consensus        83 ~~~g~L~~~l~~   94 (332)
T cd05623          83 YVGGDLLTLLSK   94 (332)
T ss_pred             cCCCcHHHHHHH
Confidence            999999998854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.27  E-value=2.5e-11  Score=76.55  Aligned_cols=89  Identities=21%  Similarity=0.256  Sum_probs=71.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++... ..++++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            344566788999999999999864 477899998865321 22334567899999999999999999999888 899999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+ +|..++.
T Consensus        83 e~~~~-~l~~~l~   94 (288)
T cd07871          83 EYLDS-DLKQYLD   94 (288)
T ss_pred             eCCCc-CHHHHHH
Confidence            99985 7877664

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.27  E-value=8.8e-11  Score=73.00  Aligned_cols=88  Identities=23%  Similarity=0.288  Sum_probs=72.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+.... ........+.+|+.+++.++|+|++++++.+... ..++++||
T Consensus         4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08228           4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence            456788999999999999864 57889999876422 1234456688899999999999999999999888 89999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++|+|..++.
T Consensus        84 ~~~~~L~~~~~   94 (267)
T cd08228          84 ADAGDLSQMIK   94 (267)
T ss_pred             cCCCcHHHHHH
Confidence            99999987763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.27  E-value=4.9e-11  Score=74.12  Aligned_cols=86  Identities=26%  Similarity=0.397  Sum_probs=72.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|++|.||++... .+..+++|.+....   .....+.+|+.++..+.|+|++++++.+... ..++++||+
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             eEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            456778999999999999865 47789999887543   3445688899999999999999999999888 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++..
T Consensus        85 ~~~~L~~~~~~   95 (263)
T cd05052          85 TYGNLLDYLRE   95 (263)
T ss_pred             CCCcHHHHHHh
Confidence            99999988753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.27  E-value=4.9e-11  Score=74.33  Aligned_cols=90  Identities=29%  Similarity=0.330  Sum_probs=72.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv   96 (113)
                      ..+.+.+.||+|+||.||++.+..    ...+++|....... ......+.+|+.++..+.|+|++++++.+.+...+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEE
Confidence            345678899999999999998532    24688888765431 3455678899999999999999999998877677899


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+++|+|.+++.+
T Consensus        85 ~e~~~~~~L~~~l~~   99 (270)
T cd05056          85 MELAPLGELRSYLQV   99 (270)
T ss_pred             EEcCCCCcHHHHHHh
Confidence            999999999988754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.27  E-value=7.4e-11  Score=74.04  Aligned_cols=90  Identities=32%  Similarity=0.416  Sum_probs=73.6

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ...+.+.++||+|+||.||.+...      .+..+++|.+....  ......+.+|+..+..++|+|++++.+.+... .
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP   81 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence            345567889999999999998531      24568888877554  45566788999999999999999999999888 8


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++++|.+++.+
T Consensus        82 ~~lv~e~~~~~~L~~~i~~  100 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRS  100 (280)
T ss_pred             eEEEEecCCCCCHHHHHHh
Confidence            9999999999999888753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.27  E-value=4.8e-11  Score=85.31  Aligned_cols=92  Identities=14%  Similarity=0.199  Sum_probs=74.9

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWL   94 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~   94 (113)
                      ....+.+.+.||+|+||.||.+... .+..+++|.+............+..|+.++..+.|+|++++++.+...   .++
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            3345667889999999999999864 467789998875433245566788999999999999999999987543   689


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+|+|..+|.
T Consensus        91 IVMEY~~gGSL~~lL~  106 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQ  106 (1021)
T ss_pred             EEEeCCCCCcHHHHHH
Confidence            9999999999988775

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.27  E-value=5.3e-11  Score=84.58  Aligned_cols=88  Identities=19%  Similarity=0.166  Sum_probs=73.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++.+... ..++++||
T Consensus         4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY   83 (932)
T PRK13184          4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPY   83 (932)
T ss_pred             eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEc
Confidence            345678999999999999865 478899999875321 123455688999999999999999999999988 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++|+|.+++.
T Consensus        84 ~eGGSL~~lL~   94 (932)
T PRK13184         84 IEGYTLKSLLK   94 (932)
T ss_pred             CCCCCHHHHHH
Confidence            99999988764

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.27  E-value=1.2e-10  Score=71.80  Aligned_cols=84  Identities=32%  Similarity=0.465  Sum_probs=71.5

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      +.||.|+||.||++....+..+++|.+..... ......+..|+.++..+.|+|++++.+.+... ..++++||+.+++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP-PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            46899999999999875578899998876543 23556788999999999999999999999888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        80 ~~~l~~   85 (251)
T cd05041          80 LTFLRK   85 (251)
T ss_pred             HHHHHh
Confidence            888754

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.27  E-value=1.1e-10  Score=73.21  Aligned_cols=89  Identities=30%  Similarity=0.467  Sum_probs=72.1

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||.+....      ...+++|.+..... ......+.+|+..+..++|+|++++++.+... ..+
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            44567889999999999997532      24688888865432 33445688999999999999999999999888 899


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+++|+|.+++.+
T Consensus        85 ~~~e~~~~~~L~~~l~~  101 (283)
T cd05048          85 MLFEYLAHGDLHEFLVR  101 (283)
T ss_pred             EEEecCCCCcHHHHHHh
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.27  E-value=7.2e-11  Score=72.98  Aligned_cols=88  Identities=19%  Similarity=0.188  Sum_probs=72.6

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|+||.+|.+... .+..+++|.+............+.+|+.+++.++|+|++++.+.+... ..++++||+.
T Consensus         3 ~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08218           3 VKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCE   82 (256)
T ss_pred             eEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCC
Confidence            45678999999999998854 577899998875432234556788899999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        83 ~~~l~~~~~~   92 (256)
T cd08218          83 GGDLYKKINA   92 (256)
T ss_pred             CCcHHHHHHh
Confidence            9999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.27  E-value=1.9e-10  Score=72.20  Aligned_cols=84  Identities=23%  Similarity=0.176  Sum_probs=70.0

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++.+... ..++++||++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   82 (279)
T cd06619           4 QYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD   82 (279)
T ss_pred             hheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence            45678999999999999864 577899998865421 34456688999999999999999999999988 8999999999


Q ss_pred             CCChhhh
Q 044522          102 NGSLDHN  108 (113)
Q Consensus       102 ~g~L~~~  108 (113)
                      +++|..+
T Consensus        83 ~~~l~~~   89 (279)
T cd06619          83 GGSLDVY   89 (279)
T ss_pred             CCChHHh
Confidence            9988654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=1.4e-10  Score=72.44  Aligned_cols=88  Identities=25%  Similarity=0.229  Sum_probs=73.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||.|++|.||++... .+..+++|.+..... ......+.+|+.+++.+.|+|++++.+.+.+. ..++++||+
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            455678999999999999865 477899998875431 33445678899999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++..
T Consensus        82 ~~~~L~~~~~~   92 (274)
T cd06609          82 GGGSCLDLLKP   92 (274)
T ss_pred             CCCcHHHHHhh
Confidence            99999988764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.26  E-value=6.8e-11  Score=73.34  Aligned_cols=87  Identities=30%  Similarity=0.317  Sum_probs=71.5

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPC  101 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~  101 (113)
                      .+.+.+.||+|+||.||++....+..+++|.+.....   ....+.+|+.+++.++|++++++++.+.....++++||+.
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (260)
T cd05070           7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMS   83 (260)
T ss_pred             HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecC
Confidence            4566788999999999999876677799998876432   2245788999999999999999998875447889999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        84 ~~~L~~~~~~   93 (260)
T cd05070          84 KGSLLDFLKD   93 (260)
T ss_pred             CCcHHHHHHh
Confidence            9999988753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.26  E-value=8.7e-11  Score=75.17  Aligned_cols=85  Identities=25%  Similarity=0.249  Sum_probs=66.7

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+..|..++..+ .|++++++++.+... ..++++||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36899999999999865 477899999875321 122334566777777655 799999999999988 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 ~~L~~~l~~   89 (321)
T cd05591          81 GDLMFQIQR   89 (321)
T ss_pred             CcHHHHHHH
Confidence            999877653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.26  E-value=1.1e-10  Score=72.11  Aligned_cols=86  Identities=17%  Similarity=0.150  Sum_probs=71.4

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||.|+||.||.+... .+..+++|.++.... ......+..|+.++..++|+|++++.+.+.+. ..++++||++
T Consensus         3 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           3 NVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             eEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            45678999999999999864 477899998865332 34456677888999999999999999999888 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      +++|.+++.
T Consensus        82 ~~~l~~~~~   90 (255)
T cd08219          82 GGDLMQKIK   90 (255)
T ss_pred             CCcHHHHHH
Confidence            999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.26  E-value=5.8e-11  Score=73.71  Aligned_cols=87  Identities=26%  Similarity=0.297  Sum_probs=72.0

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPC  101 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~  101 (113)
                      .+.+.+.||+|+||.||.+....+..+++|.+....   .....+.+|+.++..++|+|++++.+.+.....++++||++
T Consensus         7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05073           7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA   83 (260)
T ss_pred             ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence            345678899999999999986666678999877542   34567888999999999999999988887667889999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        84 ~~~L~~~~~~   93 (260)
T cd05073          84 KGSLLDFLKS   93 (260)
T ss_pred             CCcHHHHHHh
Confidence            9999988764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.26  E-value=5.9e-11  Score=75.05  Aligned_cols=89  Identities=21%  Similarity=0.198  Sum_probs=73.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.+++.+.|+|++++.+.+... ..++++|
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            34556788999999999999854 46789999886543  23445678889999999999999999999888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++++|.+++.+
T Consensus        97 ~~~~~~L~~~~~~  109 (293)
T cd06647          97 YLAGGSLTDVVTE  109 (293)
T ss_pred             cCCCCcHHHHHhh
Confidence            9999999988764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.26  E-value=2.8e-11  Score=76.04  Aligned_cols=86  Identities=19%  Similarity=0.188  Sum_probs=69.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++.+.+... ..++++||+
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV   82 (287)
T ss_pred             ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence            345678999999999999875 477899998875432233445677899999999999999999999888 999999999


Q ss_pred             CCCChhhh
Q 044522          101 CNGSLDHN  108 (113)
Q Consensus       101 ~~g~L~~~  108 (113)
                      .++.+..+
T Consensus        83 ~~~~l~~~   90 (287)
T cd07848          83 EKNMLELL   90 (287)
T ss_pred             CCCHHHHH
Confidence            98766544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.26  E-value=5.9e-11  Score=75.34  Aligned_cols=91  Identities=25%  Similarity=0.341  Sum_probs=71.3

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCc--EEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQ--VVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~--~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~   94 (113)
                      ...+.+.+.||+|+||.||++.+. .+.  .+++|.+..... ......+.+|+.++..+ +|+|++++.+.+... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC-HHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            345567788999999999999864 333  356666554221 34456688899999888 899999999999888 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+++++|..++++
T Consensus        85 lv~e~~~~~~L~~~l~~  101 (303)
T cd05088          85 LAIEYAPHGNLLDFLRK  101 (303)
T ss_pred             EEEEeCCCCcHHHHHHh
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.26  E-value=8.3e-11  Score=74.68  Aligned_cols=92  Identities=29%  Similarity=0.342  Sum_probs=73.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEe----C--CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGAL----R--DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI   91 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~----~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~   91 (113)
                      ....+.+.+.||+|+||.||.+..    .  .+..+++|.+..... ......+.+|+.++..+ +|+|++++++.+...
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            344556788999999999998863    1  244688898775432 34456688999999999 799999999999888


Q ss_pred             -eEEEEEecCCCCChhhhccC
Q 044522           92 -VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~~  111 (113)
                       ..++++||+.+|+|.+++++
T Consensus       112 ~~~~lv~e~~~~~~L~~~i~~  132 (302)
T cd05055         112 GPILVITEYCCYGDLLNFLRR  132 (302)
T ss_pred             CceEEEEEcCCCCcHHHHHHh
Confidence             99999999999999988754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.26  E-value=1.1e-10  Score=73.28  Aligned_cols=90  Identities=28%  Similarity=0.237  Sum_probs=72.8

Q ss_pred             HHhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---e
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~   92 (113)
                      +.+.+.+.||+|+||.||.+.+     ..+..+++|.+..... ......+.+|+.++..+.|+|++++.+++...   .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            4556778899999999999874     2366799999875432 34456788999999999999999999988763   6


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++++|.+++.+
T Consensus        83 ~~lv~e~~~g~~L~~~l~~  101 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPR  101 (284)
T ss_pred             eEEEEEccCCCCHHHHHHh
Confidence            8899999999999988753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.26  E-value=5.1e-11  Score=74.83  Aligned_cols=88  Identities=26%  Similarity=0.277  Sum_probs=73.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..+.|+|++++++.+... ..++++||+
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            456788999999999999875 578899998865321 34456788899999999999999999988888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|..++..
T Consensus        82 ~~~~l~~~~~~   92 (286)
T cd06622          82 DAGSLDKLYAG   92 (286)
T ss_pred             CCCCHHHHHHh
Confidence            99999887654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.26  E-value=3e-11  Score=74.62  Aligned_cols=88  Identities=18%  Similarity=0.225  Sum_probs=72.3

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|+|+.||++... .+..+++|.+............+.+|+.+++.++|+|++++++.+... ..++++||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (257)
T cd08225           3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD   82 (257)
T ss_pred             eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence            45678999999999999875 477889998875432223445677899999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        83 ~~~L~~~~~~   92 (257)
T cd08225          83 GGDLMKRINR   92 (257)
T ss_pred             CCcHHHHHHh
Confidence            9999887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.26  E-value=1e-11  Score=82.99  Aligned_cols=90  Identities=22%  Similarity=0.144  Sum_probs=77.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .|.+.+.||+|-|..|-.+..- .|..||+|++.....+.-....+..|+.+|+.++|||+|+|+.+...+ .+|++.|.
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            3567899999999988766532 478999999998776555667788999999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      -.+|+|+++|-+
T Consensus        99 GD~GDl~DyImK  110 (864)
T KOG4717|consen   99 GDGGDLFDYIMK  110 (864)
T ss_pred             cCCchHHHHHHh
Confidence            999999998753

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.26  E-value=7.5e-11  Score=72.79  Aligned_cols=88  Identities=19%  Similarity=0.252  Sum_probs=73.0

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|.+|.+|.+... .+..+++|.+............+.+|+.+++.++|+|++++++..... ..++++||++
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08220           3 EKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAP   82 (256)
T ss_pred             eEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCC
Confidence            45678999999999998864 577899998876543234556788999999999999999999988877 8999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        83 ~~~L~~~~~~   92 (256)
T cd08220          83 GGTLAEYIQK   92 (256)
T ss_pred             CCCHHHHHHH
Confidence            9999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.26  E-value=3.8e-11  Score=74.19  Aligned_cols=87  Identities=31%  Similarity=0.340  Sum_probs=71.7

Q ss_pred             HhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|+||.||++.... +..+++|.+..............+|+..+..+.|+|++++.++.... ..++++|++.
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~   81 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP   81 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence            356789999999999999754 66899999988753233333455688899999999999999999988 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      +++|.+++.
T Consensus        82 ~~~L~~~l~   90 (260)
T PF00069_consen   82 GGSLQDYLQ   90 (260)
T ss_dssp             TEBHHHHHH
T ss_pred             ccccccccc
Confidence            999988765

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.26  E-value=1.1e-10  Score=74.71  Aligned_cols=85  Identities=25%  Similarity=0.253  Sum_probs=65.4

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... .......+..|.. ++..+.|+|++++++.+... ..++++||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999874 478899999875321 1122334445544 57788999999999998888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 ~~L~~~l~~   89 (321)
T cd05603          81 GELFFHLQR   89 (321)
T ss_pred             CCHHHHHHH
Confidence            999876643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.26  E-value=1e-11  Score=82.70  Aligned_cols=90  Identities=20%  Similarity=0.155  Sum_probs=74.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...|++.||+|+|+.|+++... .+..+|||++..... ..+..+-...|-.+|..+ .||.+++|+--+.++ .+|+|+
T Consensus        74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL  153 (604)
T KOG0592|consen   74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL  153 (604)
T ss_pred             hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence            4468999999999999999854 578899999876532 122344466777788888 899999999999999 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||.++|+|.++|++
T Consensus       154 e~A~nGdll~~i~K  167 (604)
T KOG0592|consen  154 EYAPNGDLLDLIKK  167 (604)
T ss_pred             EecCCCcHHHHHHH
Confidence            99999999999875

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.25  E-value=6.6e-11  Score=75.81  Aligned_cols=87  Identities=22%  Similarity=0.259  Sum_probs=67.3

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHH---hhCCCCccceeeeEEEec-eEEEEEe
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEIL---SCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~---~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      +.+.||+|+||.||++... .+..+++|.+..... .......+.+|..++   ..+.|+|++++++++... ..++++|
T Consensus         3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E   82 (324)
T cd05589           3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVME   82 (324)
T ss_pred             EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEc
Confidence            4577999999999999864 478899999875421 122334555665543   566899999999999888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|..++.+
T Consensus        83 ~~~~~~L~~~~~~   95 (324)
T cd05589          83 YAAGGDLMMHIHT   95 (324)
T ss_pred             CCCCCcHHHHhhc
Confidence            9999999877654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.25  E-value=6.7e-11  Score=73.76  Aligned_cols=88  Identities=23%  Similarity=0.278  Sum_probs=70.6

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch--------hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA--------CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~--------~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ...+.||.|++|.||+|... .+..+++|.+.....        .....+.+..|+.++..++|+|++++++.+... ..
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   83 (272)
T cd06629           4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYL   83 (272)
T ss_pred             eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCce
Confidence            45678999999999999864 477899998754210        011234577889999999999999999999888 99


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++++|.+++++
T Consensus        84 ~lv~e~~~~~~L~~~l~~  101 (272)
T cd06629          84 SIFLEYVPGGSIGSCLRT  101 (272)
T ss_pred             EEEEecCCCCcHHHHHhh
Confidence            999999999999988754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.25  E-value=8.1e-11  Score=74.18  Aligned_cols=89  Identities=26%  Similarity=0.225  Sum_probs=73.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|++|.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+... ..++++||
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY   82 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence            345678999999999999864 478899998865321 123456688899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        83 ~~~~~L~~~~~~   94 (290)
T cd05580          83 VPGGELFSHLRK   94 (290)
T ss_pred             CCCCCHHHHHHH
Confidence            999999888754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.25  E-value=1.2e-10  Score=73.31  Aligned_cols=87  Identities=32%  Similarity=0.366  Sum_probs=70.1

Q ss_pred             HhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .+.+.||+|+||.||++...      ....+++|.+..... ......+.+|+..+..+.|+|++++++.+... ..+++
T Consensus         3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            45678999999999999742      124678887765432 34456788999999999999999999999888 89999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+.+|+|.+++..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (290)
T cd05045          82 VEYAKYGSLRSFLRE   96 (290)
T ss_pred             EEecCCCCHHHHHHh
Confidence            999999999988653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.25  E-value=1e-10  Score=74.75  Aligned_cols=85  Identities=24%  Similarity=0.248  Sum_probs=67.0

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... .......+..|..++..+ .|+|++++++.+... ..++++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999875 477899999875421 122334566777777766 799999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 ~~L~~~~~~   89 (318)
T cd05570          81 GDLMFHIQR   89 (318)
T ss_pred             CCHHHHHHH
Confidence            999877653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.25  E-value=8.7e-11  Score=73.90  Aligned_cols=88  Identities=25%  Similarity=0.337  Sum_probs=72.2

Q ss_pred             hHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      +.+.+.||+|+||.||++...      .+..+++|.+..... ......+.+|+.++..+.|+|++++.+++... ..++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l   85 (288)
T cd05050           7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL   85 (288)
T ss_pred             ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence            455678999999999998752      356789998875431 33445688899999999999999999999888 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++++
T Consensus        86 v~e~~~~~~L~~~l~~  101 (288)
T cd05050          86 LFEYMAYGDLNEFLRH  101 (288)
T ss_pred             EEecCCCCCHHHHHHH
Confidence            9999999999988763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.25  E-value=1.1e-10  Score=73.18  Aligned_cols=90  Identities=29%  Similarity=0.360  Sum_probs=72.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ..+.+.+.||+|++|.||++.+..      +..+++|.+..... ......+..|+.++..++|+|++++++.+... ..
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            345567889999999999998642      45688888765431 33445688899999999999999999988888 88


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+++|.+++..
T Consensus        85 ~lv~e~~~g~~L~~~i~~  102 (277)
T cd05036          85 FILLELMAGGDLKSFLRE  102 (277)
T ss_pred             EEEEecCCCCCHHHHHHH
Confidence            999999999999988753

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.25  E-value=8.6e-11  Score=74.66  Aligned_cols=91  Identities=26%  Similarity=0.342  Sum_probs=73.1

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCC--------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRD--------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE   90 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~--------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~   90 (113)
                      ...+.+.+.||+|+||.||.+....        ...+++|.+..... ......+.+|+.++..+ .|+|++++.+.+..
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            3556789999999999999886421        24688998875421 34445678899999888 79999999999988


Q ss_pred             c-eEEEEEecCCCCChhhhccC
Q 044522           91 I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      . ..++++||+++|+|.+++..
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~  117 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRA  117 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHh
Confidence            8 99999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=3.1e-12  Score=83.13  Aligned_cols=86  Identities=23%  Similarity=0.228  Sum_probs=74.4

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ..+.||+|+||.||+|... .+..+|+|.++.... ........+|+.++.++.++|+..+++.+..+ .++++|||+.+
T Consensus        17 ~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~g   95 (467)
T KOG0201|consen   17 KLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGG   95 (467)
T ss_pred             cchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcC
Confidence            3478999999999999964 477899999987543 34566788999999999999999999999999 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |++.+.+..
T Consensus        96 Gsv~~lL~~  104 (467)
T KOG0201|consen   96 GSVLDLLKS  104 (467)
T ss_pred             cchhhhhcc
Confidence            999888764

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.25  E-value=8.6e-11  Score=73.65  Aligned_cols=88  Identities=24%  Similarity=0.229  Sum_probs=72.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|.+|.+|++... .+..+++|.+............+.+|+.++..+.|+|++++++.+..+ ..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            346778999999999999864 578899999876542233456688899999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                       +++|.+++.+
T Consensus        82 -~~~L~~~~~~   91 (286)
T cd07832          82 -PSDLSEVLRD   91 (286)
T ss_pred             -CCCHHHHHHh
Confidence             9999887753

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.25  E-value=8.1e-11  Score=75.34  Aligned_cols=85  Identities=25%  Similarity=0.256  Sum_probs=66.8

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... .......+..|..++..+ .|+|++++++.+... ..++++||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999865 477899999875321 122344566777777665 699999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~i~~   89 (320)
T cd05590          81 GDLMFHIQK   89 (320)
T ss_pred             chHHHHHHH
Confidence            999887654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.25  E-value=1.2e-10  Score=74.47  Aligned_cols=85  Identities=24%  Similarity=0.243  Sum_probs=65.8

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhh-CCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSC-AQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~-~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... ..........|..++.. ..|+|++++++.+... ..++++||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36899999999999865 477899999875421 01223345556666665 4899999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~l~~   89 (316)
T cd05619          81 GDLMFHIQS   89 (316)
T ss_pred             CcHHHHHHH
Confidence            999888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.24  E-value=1.1e-10  Score=74.64  Aligned_cols=85  Identities=21%  Similarity=0.211  Sum_probs=64.5

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhh-CCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSC-AQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~-~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... ..........|..++.. ..|+|++++++.+... ..++++||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999865 477899999875321 11223344455555554 4899999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~~~~   89 (316)
T cd05592          81 GDLMFHIQS   89 (316)
T ss_pred             CcHHHHHHH
Confidence            999887653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.24  E-value=1.1e-10  Score=72.71  Aligned_cols=86  Identities=29%  Similarity=0.452  Sum_probs=68.0

Q ss_pred             HhcCccccCCCceEEEEEeCC-C--cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eE
Q 044522           24 TLGKTPRRGGFGAVYKGALRD-G--QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VW   93 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~-~--~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~   93 (113)
                      .+++.||+|+||.||+|.+.. +  ..+++|.+............+.+|+..+..++|+|++++++.+...       ..
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            367889999999999998643 2  2588888765432245567788899999999999999999987532       46


Q ss_pred             EEEEecCCCCChhhhc
Q 044522           94 LLVYGYPCNGSLDHNL  109 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l  109 (113)
                      ++++||+.+|+|..++
T Consensus        82 ~~v~e~~~~~~l~~~~   97 (272)
T cd05075          82 VVILPFMKHGDLHSFL   97 (272)
T ss_pred             EEEEEeCCCCcHHHHH
Confidence            8999999999998776

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.24  E-value=9.7e-11  Score=73.35  Aligned_cols=91  Identities=25%  Similarity=0.308  Sum_probs=73.2

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCC-----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~   92 (113)
                      ...+.+.+.||+|+||.||+|....     +..+++|.+..... ......+.+|+..+..+.|+|++++++++...  .
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS-EIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            3455678899999999999998643     56788888764321 34556688899999999999999999988774  7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .+++++|+.+++|..++..
T Consensus        84 ~~~~~~~~~~~~L~~~l~~  102 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQ  102 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHh
Confidence            8899999999999888753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.24  E-value=1.4e-10  Score=74.30  Aligned_cols=85  Identities=25%  Similarity=0.262  Sum_probs=65.8

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... .......+..|.. ++..++|+|++++++.+... ..++++||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36899999999999874 578899999875321 1122334445544 45778999999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~l~~   89 (323)
T cd05575          81 GELFFHLQR   89 (323)
T ss_pred             CCHHHHHHh
Confidence            999887654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.24  E-value=8.7e-11  Score=72.99  Aligned_cols=88  Identities=19%  Similarity=0.300  Sum_probs=72.2

Q ss_pred             HhcCccccCCCceEEEEEe-CCCcEEEEEEeeccch----hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSA----CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~----~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..++.||+|++|.||.+.. ..+..+++|.+.....    .......+.+|+.+++.++|+|++++++.+... ..++++
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~   82 (268)
T cd06630           3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV   82 (268)
T ss_pred             cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEE
Confidence            4567899999999999985 3577899998864321    112356788999999999999999999999888 899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+++|.+++.+
T Consensus        83 e~~~~~~L~~~l~~   96 (268)
T cd06630          83 EWMAGGSVSHLLSK   96 (268)
T ss_pred             eccCCCcHHHHHHH
Confidence            99999999888753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.24  E-value=4.1e-11  Score=76.17  Aligned_cols=90  Identities=21%  Similarity=0.251  Sum_probs=71.2

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ++..+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++.+... ..+++
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   82 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV   82 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence            3345667788999999999999864 467899998875431 22234567899999999999999999999888 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+ +|..++.
T Consensus        83 ~e~~~~-~l~~~~~   95 (309)
T cd07872          83 FEYLDK-DLKQYMD   95 (309)
T ss_pred             EeCCCC-CHHHHHH
Confidence            999985 6776654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.24  E-value=1.4e-10  Score=72.75  Aligned_cols=82  Identities=22%  Similarity=0.202  Sum_probs=65.5

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccchhH-HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA-QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||+|+||.||++... .+..+++|.+....... ........|+.++..++|+|++++.+.+... ..++++||+.+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            689999999998864 47889999886432111 1223455688899999999999999999888 99999999999999


Q ss_pred             hhhcc
Q 044522          106 DHNLC  110 (113)
Q Consensus       106 ~~~l~  110 (113)
                      ..++.
T Consensus        81 ~~~~~   85 (277)
T cd05607          81 KYHIY   85 (277)
T ss_pred             HHHHH
Confidence            87664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=6.7e-12  Score=86.35  Aligned_cols=82  Identities=21%  Similarity=0.248  Sum_probs=72.7

Q ss_pred             ccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           28 TPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ++|+|.+|.||.|...+ ...++||.++...  .+..+.+..|+.+.+.++|.|+|+++|.+... ++.|.||-++||+|
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            49999999999998654 4568999998765  67788899999999999999999999999888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      ..+++.
T Consensus       660 SsLLrs  665 (1226)
T KOG4279|consen  660 SSLLRS  665 (1226)
T ss_pred             HHHHHh
Confidence            998874

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.24  E-value=8.9e-11  Score=81.77  Aligned_cols=90  Identities=24%  Similarity=0.237  Sum_probs=74.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|.||.||.+... .+..+++|.+..... .......+..|+.++..+.|+++++++..+... ..++|+|
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE   84 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME   84 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence            4556788999999999999875 578899999875431 123345677888899999999999999988888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+++|..++..
T Consensus        85 y~~g~~L~~li~~   97 (669)
T cd05610          85 YLIGGDVKSLLHI   97 (669)
T ss_pred             CCCCCCHHHHHHh
Confidence            9999999988753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.24  E-value=1.2e-10  Score=73.60  Aligned_cols=88  Identities=25%  Similarity=0.318  Sum_probs=70.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-----------------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceee
Q 044522           23 STLGKTPRRGGFGAVYKGALR-----------------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV   85 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-----------------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~   85 (113)
                      +.+.+.||+|+||.||.+...                 ....+++|.+..... ......+.+|+.++..++|+|+++++
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~   85 (296)
T cd05095           7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNIIRLL   85 (296)
T ss_pred             ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            567788999999999987421                 133578888875421 34456788999999999999999999


Q ss_pred             eEEEec-eEEEEEecCCCCChhhhccC
Q 044522           86 GYCIEI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        86 ~~~~~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      +.+... ..++++||+.+|+|..++.+
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (296)
T cd05095          86 AVCITSDPLCMITEYMENGDLNQFLSR  112 (296)
T ss_pred             EEEecCCccEEEEEeCCCCcHHHHHHh
Confidence            999888 99999999999999988754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.23  E-value=8.9e-11  Score=74.13  Aligned_cols=87  Identities=22%  Similarity=0.302  Sum_probs=71.1

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh---HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC---AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.||+|.+|.||++... .+..+++|.+......   ......+..|+.++..++|+|++++.+.+... ..++|+|
T Consensus         3 ~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (298)
T cd07841           3 EKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFE   82 (298)
T ss_pred             eeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEc
Confidence            45677999999999999864 4788999998765321   12334567888999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+ +|+|..++.+
T Consensus        83 ~~-~~~L~~~i~~   94 (298)
T cd07841          83 FM-ETDLEKVIKD   94 (298)
T ss_pred             cc-CCCHHHHHhc
Confidence            99 8899888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.23  E-value=9.4e-11  Score=72.76  Aligned_cols=86  Identities=27%  Similarity=0.276  Sum_probs=69.9

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCN  102 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~  102 (113)
                      +.+.+.||+|++|.||.+....+..+++|.+....   .....+.+|+.++..+.|+|++++++.+.....++++||+.+
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            45677899999999999987666678999876543   223457789999999999999999988754578899999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++.+
T Consensus        85 ~~L~~~~~~   93 (260)
T cd05069          85 GSLLDFLKE   93 (260)
T ss_pred             CCHHHHHhh
Confidence            999988754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=1.9e-10  Score=71.31  Aligned_cols=88  Identities=24%  Similarity=0.243  Sum_probs=72.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch---hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA---CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +.+.+.||+|++|.||.+... .+..+++|.+.....   .......+.+|+.++..++|+|++++++.+... ..++++
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   83 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM   83 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence            456788999999999999864 478899998865421   122345678899999999999999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+++++|.+++.
T Consensus        84 e~~~~~~l~~~~~   96 (263)
T cd06625          84 EYMPGGSVKDQLK   96 (263)
T ss_pred             EECCCCcHHHHHH
Confidence            9999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.23  E-value=9.2e-11  Score=72.51  Aligned_cols=86  Identities=29%  Similarity=0.385  Sum_probs=71.0

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.+.||.|+||.||++.+..+..+++|.+.....   ....+..|+..++.+.|++++++++.+... ..++++||+.
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM---SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC---CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            345678999999999999876567889998765432   234577899999999999999999998888 8999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        83 ~~~L~~~~~~   92 (256)
T cd05112          83 HGCLSDYLRA   92 (256)
T ss_pred             CCcHHHHHHh
Confidence            9999887753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.23  E-value=1.1e-10  Score=72.85  Aligned_cols=89  Identities=24%  Similarity=0.322  Sum_probs=72.3

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||.+....      +..+++|.+..... ......+.+|+.++..++|+|++++++.+... ..+
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            44567889999999999987532      35789998865432 34455678899999999999999999999888 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+++|+|..++..
T Consensus        86 ~v~e~~~~~~L~~~l~~  102 (277)
T cd05032          86 VVMELMAKGDLKSYLRS  102 (277)
T ss_pred             EEEecCCCCCHHHHHHh
Confidence            99999999999988753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.23  E-value=1.2e-10  Score=75.18  Aligned_cols=89  Identities=29%  Similarity=0.359  Sum_probs=71.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--e
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--V   92 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--~   92 (113)
                      .+.+.+.||+|+||.||.+...      .+..+++|.++.... ......+..|+.++..+ +|+|++++++.+...  .
T Consensus         8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            4667899999999999998631      146799998875432 34455677899999888 799999999988765  7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++++|..++..
T Consensus        87 ~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             EEEEEecCCCCCHHHHHHh
Confidence            8899999999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.23  E-value=1.9e-12  Score=81.50  Aligned_cols=83  Identities=23%  Similarity=0.297  Sum_probs=72.8

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.++||+|++|.|+++.++ .|..+++|.++..    ...++.+.|+.+|....++.+|+++|.+... .+++|||||..
T Consensus        37 i~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   37 IVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            3577999999999999875 4788999988763    4566788999999999999999999999999 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |++.+.++-
T Consensus       113 GSiSDI~R~  121 (502)
T KOG0574|consen  113 GSISDIMRA  121 (502)
T ss_pred             CcHHHHHHH
Confidence            999888764

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.23  E-value=2.2e-10  Score=70.94  Aligned_cols=84  Identities=30%  Similarity=0.347  Sum_probs=68.3

Q ss_pred             CccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~  102 (113)
                      +.||+|+||.||+|.+..    ...+++|.+..... ......+.+|+.++..+.|+|++++++.+.....++++||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI-AAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCC
Confidence            468999999999997532    26799998876543 2345568889999999999999999998765578999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|.+++.+
T Consensus        80 ~~L~~~l~~   88 (257)
T cd05060          80 GPLLKYLKK   88 (257)
T ss_pred             CcHHHHHHh
Confidence            999988764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.23  E-value=1.3e-10  Score=73.27  Aligned_cols=86  Identities=22%  Similarity=0.242  Sum_probs=69.5

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ..+.||+|+||.||.+... .+..+++|.+...... ......+..|+.++..++|++++.+.+.+... ..++++||++
T Consensus         4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05630           4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN   83 (285)
T ss_pred             eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence            4567999999999999865 4778999988653211 22334567889999999999999999998888 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      +++|..++.
T Consensus        84 g~~L~~~l~   92 (285)
T cd05630          84 GGDLKFHIY   92 (285)
T ss_pred             CCcHHHHHH
Confidence            999987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.23  E-value=5.3e-11  Score=79.85  Aligned_cols=86  Identities=26%  Similarity=0.222  Sum_probs=72.2

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .-.++||+|.||.||-|..+ .|+.||+|.+.......+....+.+|+.++..++||.+|.+--.++.+ .+++|||=+.
T Consensus       567 f~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  567 FADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             hhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence            34789999999999999864 589999999987654456667899999999999999999999999998 9999999887


Q ss_pred             CCChhhhc
Q 044522          102 NGSLDHNL  109 (113)
Q Consensus       102 ~g~L~~~l  109 (113)
                      |--|...+
T Consensus       647 GDMLEMIL  654 (888)
T KOG4236|consen  647 GDMLEMIL  654 (888)
T ss_pred             chHHHHHH
Confidence            54444443

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.22  E-value=2.3e-10  Score=71.80  Aligned_cols=89  Identities=28%  Similarity=0.254  Sum_probs=70.1

Q ss_pred             HhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~   93 (113)
                      .+.+.+.||+|+||.||.+.+     ..+..+++|.+..... ......+.+|+.++..++|+|++++.+.+...   ..
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence            346678899999999987643     2366899999876431 23456678899999999999999999987653   58


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+++|.+++.+
T Consensus        84 ~lv~e~~~~~~l~~~~~~  101 (283)
T cd05080          84 QLIMEYVPLGSLRDYLPK  101 (283)
T ss_pred             EEEecCCCCCCHHHHHHH
Confidence            899999999999887653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.22  E-value=1.9e-10  Score=71.00  Aligned_cols=84  Identities=33%  Similarity=0.459  Sum_probs=71.2

Q ss_pred             CccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           27 KTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.||+|+||.||++....    +..+++|.++.... ......+.+|+..+..+.|++++++++++... ..++++||++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS-EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccc-hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence            468999999999998642    67899999887543 22456788999999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        80 ~~~L~~~l~~   89 (262)
T cd00192          80 GGDLLDYLRK   89 (262)
T ss_pred             CCcHHHHHhh
Confidence            9999998765

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.22  E-value=7.5e-11  Score=74.79  Aligned_cols=87  Identities=23%  Similarity=0.343  Sum_probs=69.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.+++.+.|+|++++.+++... ..++++||
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           6 SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             cceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            4556788999999999999865 578899999875431 12234567899999999999999999999888 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +. ++|.+++.
T Consensus        85 ~~-~~l~~~~~   94 (303)
T cd07869          85 VH-TDLCQYMD   94 (303)
T ss_pred             CC-cCHHHHHH
Confidence            96 56766554

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.22  E-value=1.4e-10  Score=73.56  Aligned_cols=92  Identities=26%  Similarity=0.363  Sum_probs=73.3

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC--------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR--------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCI   89 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~   89 (113)
                      ....+.+.+.||+|+||.||.+...        .+..+++|.+..... ......+.+|+.++..+ .|+|++++++.+.
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            3445567899999999999988631        134688888764321 34456788999999998 7999999999998


Q ss_pred             ec-eEEEEEecCCCCChhhhccC
Q 044522           90 EI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        90 ~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      .. ..++++||+.+|+|.+++.+
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~  114 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRA  114 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHh
Confidence            88 89999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.22  E-value=2.5e-10  Score=73.30  Aligned_cols=84  Identities=21%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+..|..++..+ .|++++.+++.+... ..++++||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36899999999999864 477899999875421 123345577888887777 699999999998888 99999999999


Q ss_pred             CChhhhcc
Q 044522          103 GSLDHNLC  110 (113)
Q Consensus       103 g~L~~~l~  110 (113)
                      |+|..++.
T Consensus        81 ~~L~~~~~   88 (327)
T cd05617          81 GDLMFHMQ   88 (327)
T ss_pred             CcHHHHHH
Confidence            99987664

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.22  E-value=2.3e-10  Score=73.32  Aligned_cols=85  Identities=24%  Similarity=0.246  Sum_probs=65.2

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||.+... .+..+++|.+..... .......+..|.. ++..++|+|++++++.+... ..++++||+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            36899999999999864 578899999875321 1122334455544 46678999999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 ~~L~~~l~~   89 (325)
T cd05604          81 GELFFHLQR   89 (325)
T ss_pred             CCHHHHHHH
Confidence            999877653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.22  E-value=1.9e-10  Score=70.96  Aligned_cols=86  Identities=36%  Similarity=0.505  Sum_probs=72.2

Q ss_pred             hcCccccCCCceEEEEEeCC-----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           25 LGKTPRRGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      +.+.||.|+||.||++....     +..+++|.+..... ......+..|+..+..++|+|++++++.+... ..++++|
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            56789999999999998643     37799999876542 22566788999999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++++|.+++..
T Consensus        82 ~~~~~~l~~~~~~   94 (258)
T smart00219       82 YMEGGDLLDYLRK   94 (258)
T ss_pred             ccCCCCHHHHHHh
Confidence            9999999888754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.22  E-value=1.1e-10  Score=72.15  Aligned_cols=82  Identities=28%  Similarity=0.394  Sum_probs=65.2

Q ss_pred             CccccCCCceEEEEEeCC-C----------cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEE
Q 044522           27 KTPRRGGFGAVYKGALRD-G----------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLL   95 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~-~----------~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~l   95 (113)
                      +.||+|+||.||++.... +          ..+++|.+....   .....+.+|+.+++.++|+|++++.+.+.....++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l   77 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIM   77 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEE
Confidence            468999999999998643 2          246677665443   22567888999999999999999999887676789


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|..++.+
T Consensus        78 v~e~~~~~~L~~~l~~   93 (259)
T cd05037          78 VEEYVKFGPLDVFLHR   93 (259)
T ss_pred             EEEcCCCCcHHHHHHh
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.22  E-value=1.6e-10  Score=72.82  Aligned_cols=86  Identities=21%  Similarity=0.223  Sum_probs=69.5

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ..+.||+|+||.||.+... .+..+++|.+...... ......+.+|+.++..++|++++.+.+.+... ..++++||+.
T Consensus         4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05632           4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN   83 (285)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence            3467999999999999864 5778999998754321 12234567899999999999999999888888 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      +++|..++.
T Consensus        84 ~~~L~~~~~   92 (285)
T cd05632          84 GGDLKFHIY   92 (285)
T ss_pred             CccHHHHHH
Confidence            999987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.22  E-value=2.1e-10  Score=72.82  Aligned_cols=88  Identities=22%  Similarity=0.167  Sum_probs=71.7

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.+|+|+|+.||++... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+... ..++++||+
T Consensus         4 ~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   83 (305)
T cd05609           4 ETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYV   83 (305)
T ss_pred             eEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecC
Confidence            45677999999999999864 467899998875431 123345677889999999999999999998888 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|..++.+
T Consensus        84 ~g~~L~~~l~~   94 (305)
T cd05609          84 EGGDCATLLKN   94 (305)
T ss_pred             CCCcHHHHHHH
Confidence            99999988754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.21  E-value=1.6e-10  Score=74.29  Aligned_cols=90  Identities=27%  Similarity=0.367  Sum_probs=72.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC--------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD--------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~--------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~   91 (113)
                      ..+.+.+.||+|+||.||.+....        ...+++|.+..... ......+.+|+.++..+ .|+|++++.+.+...
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-DKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-HHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            455678999999999999886411        23588888764321 34556788999999999 799999999999888


Q ss_pred             -eEEEEEecCCCCChhhhccC
Q 044522           92 -VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~~  111 (113)
                       ..++++||+++|+|.+++.+
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~  111 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRA  111 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHh
Confidence             89999999999999988753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.21  E-value=1.3e-10  Score=72.84  Aligned_cols=88  Identities=23%  Similarity=0.190  Sum_probs=70.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|.+|.||++... .+..+++|.+..........+.+.+|+.++..+.|+|++++.+.+... ..++++||+
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   82 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC   82 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence            345677999999999999875 478899998764321122334577899999999999999999999888 899999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      +++.+..++.
T Consensus        83 ~~~~l~~~~~   92 (286)
T cd07847          83 DHTVLNELEK   92 (286)
T ss_pred             CccHHHHHHh
Confidence            9988877654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.21  E-value=2e-10  Score=72.42  Aligned_cols=89  Identities=29%  Similarity=0.388  Sum_probs=72.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ..+.+.+.||+|+||.||.+...      ....+++|.+....  ......+.+|+..+..++|+|++++.+.+... ..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL   82 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence            34556788999999999998742      23457788776544  34456788999999999999999999999888 89


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++++|.+++..
T Consensus        83 ~lv~e~~~~~~L~~~i~~  100 (291)
T cd05094          83 IMVFEYMKHGDLNKFLRA  100 (291)
T ss_pred             EEEEecCCCCcHHHHHHh
Confidence            999999999999988753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.21  E-value=2.6e-10  Score=73.08  Aligned_cols=85  Identities=24%  Similarity=0.214  Sum_probs=64.7

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||++... .+..+++|.+..... .......+..+.. ++..+.|+|++++++.+... ..++++||+.+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36899999999999865 467899999875321 1122233444443 46778999999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 ~~L~~~~~~   89 (325)
T cd05602          81 GELFYHLQR   89 (325)
T ss_pred             CcHHHHHHh
Confidence            999887754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.21  E-value=8.7e-11  Score=74.39  Aligned_cols=90  Identities=23%  Similarity=0.260  Sum_probs=71.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      +...+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+..+..++|+|++++++++... ..+++
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv   82 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV   82 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence            3455667788999999999999864 477899998875431 22234567889999999999999999999888 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+. ++|..++.
T Consensus        83 ~e~~~-~~l~~~l~   95 (301)
T cd07873          83 FEYLD-KDLKQYLD   95 (301)
T ss_pred             Eeccc-cCHHHHHH
Confidence            99997 47777654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.21  E-value=2.6e-10  Score=70.74  Aligned_cols=88  Identities=19%  Similarity=0.150  Sum_probs=73.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||.|+||.||++... .+..+++|.+..... ......+.+|+..++.+.|+|++++.+.+... ..++++|++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC-QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc-chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            456788999999999999864 467899998875432 23556788999999999999999999988888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++.+
T Consensus        82 ~~~~l~~~~~~   92 (267)
T cd06610          82 SGGSLLDIMKS   92 (267)
T ss_pred             CCCcHHHHHHH
Confidence            99999888754

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.21  E-value=1.5e-10  Score=72.23  Aligned_cols=88  Identities=24%  Similarity=0.331  Sum_probs=71.0

Q ss_pred             hHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      +.....||+|+||.||.+...      ....+++|.+..... ......+.+|+.++..++|+|++++++++... ..++
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   85 (275)
T cd05046           7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM   85 (275)
T ss_pred             ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence            345677999999999999853      235688888765431 22456788999999999999999999999887 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++..
T Consensus        86 v~e~~~~~~L~~~i~~  101 (275)
T cd05046          86 ILEYTDLGDLKQFLRA  101 (275)
T ss_pred             EEEecCCCcHHHHHHh
Confidence            9999999999988753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.21  E-value=2e-10  Score=71.37  Aligned_cols=89  Identities=25%  Similarity=0.292  Sum_probs=73.0

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++.. ..+..+++|.+..... .......+.+|+.++..+.|+|++++++.+... ..++++|
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            456678899999999999985 3578899998765321 133445788899999999999999999999888 8999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|.+++.
T Consensus        83 ~~~~~~L~~~~~   94 (267)
T cd08229          83 LADAGDLSRMIK   94 (267)
T ss_pred             ecCCCCHHHHHH
Confidence            999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.21  E-value=3.3e-10  Score=70.75  Aligned_cols=84  Identities=26%  Similarity=0.375  Sum_probs=67.1

Q ss_pred             CccccCCCceEEEEEeCC-Cc--EEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCC
Q 044522           27 KTPRRGGFGAVYKGALRD-GQ--VVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~-~~--~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.||+|+||.||++.... +.  .+++|.+..... ......+.+|+..+..+ .|+|++++++.+... ..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            468999999999998643 33  467787764321 34455688899999888 799999999999888 8999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|.+++.+
T Consensus        80 ~~~L~~~i~~   89 (270)
T cd05047          80 HGNLLDFLRK   89 (270)
T ss_pred             CCcHHHHHHh
Confidence            9999988753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=4.9e-12  Score=83.09  Aligned_cols=90  Identities=19%  Similarity=0.188  Sum_probs=72.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHH--HHHHHHHHhhCC-CCccceeeeEEEec--e
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQ--FISEDEILSCAQ-HRSLVVLVGYCIEI--V   92 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~--~~~e~~~~~~~~-h~~i~~l~~~~~~~--~   92 (113)
                      -+..|...++||.|.||.||.+... .+..||||..+....   ...+  -.+|+..++.++ |+|++.+..+..+.  .
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~---s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~   84 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY---SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI   84 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc---cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence            3455667888999999999999853 577899998875432   2333  357999999998 99999999999887  7


Q ss_pred             EEEEEecCCCCChhhhccCC
Q 044522           93 WLLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~~  112 (113)
                      +++|||||.. +|+++|+++
T Consensus        85 L~fVfE~Md~-NLYqLmK~R  103 (538)
T KOG0661|consen   85 LYFVFEFMDC-NLYQLMKDR  103 (538)
T ss_pred             EeeeHHhhhh-hHHHHHhhc
Confidence            9999999985 799888765

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.21  E-value=2.4e-10  Score=73.29  Aligned_cols=84  Identities=14%  Similarity=0.131  Sum_probs=68.9

Q ss_pred             ccccC--CCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           28 TPRRG--GFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        28 ~lg~g--~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      .||+|  +|+.||.+... .+..+++|.+..........+.+.+|+.++..++|+|++++++++..+ ..++++||+.++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            45555  88999999864 588999999876432244556788888888889999999999999988 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      ++.+++.+
T Consensus        85 ~l~~~l~~   92 (328)
T cd08226          85 SANSLLKT   92 (328)
T ss_pred             CHHHHHHh
Confidence            99888753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.21  E-value=3.2e-10  Score=70.94  Aligned_cols=89  Identities=29%  Similarity=0.288  Sum_probs=72.6

Q ss_pred             HhHhcCccccCCCceEEEEEeC-----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--c-eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--I-VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--~-~~   93 (113)
                      .+.+.+.||+|+||.||++.+.     .+..+++|.+..... ......+..|+..+..+.|+|++++.+++..  . ..
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE-EQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc-hHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            3456688999999999999753     256799999876542 1345678899999999999999999998877  4 78


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++++|.+++.+
T Consensus        84 ~lv~e~~~~~~l~~~l~~  101 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQR  101 (284)
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999988754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.21  E-value=2.3e-10  Score=71.17  Aligned_cols=88  Identities=30%  Similarity=0.428  Sum_probs=71.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CC---cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DG---QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~---~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +...+.||+|+||.||++... .+   ..+++|.+..... ......+..|+.++..+.|+|++++.+.+... ..++++
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT   85 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence            345678999999999999863 22   3688888865431 33456688899999999999999999999888 899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++++|..++.+
T Consensus        86 e~~~~~~L~~~~~~   99 (268)
T cd05063          86 EYMENGALDKYLRD   99 (268)
T ss_pred             EcCCCCCHHHHHHh
Confidence            99999999888753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=3.4e-10  Score=70.76  Aligned_cols=88  Identities=22%  Similarity=0.272  Sum_probs=70.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC---CCccceeeeEEEec-eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ---HRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~---h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +...+.||+|+||.+|++... .+..+++|.+..... ......+.+|+.++..+.   |+|++++.+.+... ..++++
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            345678999999999999864 578899998865421 334456778888888775   99999999999888 899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++++|.++++.
T Consensus        82 e~~~~~~L~~~~~~   95 (277)
T cd06917          82 EYAEGGSVRTLMKA   95 (277)
T ss_pred             ecCCCCcHHHHHHc
Confidence            99999999887654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.21  E-value=3.1e-10  Score=71.53  Aligned_cols=89  Identities=25%  Similarity=0.274  Sum_probs=72.2

Q ss_pred             HhHhcCccccCCCceEEEEEeCC-----------------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCcccee
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD-----------------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL   84 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~-----------------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l   84 (113)
                      .+.+.+.||+|+||.||.+....                 +..+++|.+..... ......+.+|+.++..+.|+|++++
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            44567889999999999886421                 23578888775432 3455678899999999999999999


Q ss_pred             eeEEEec-eEEEEEecCCCCChhhhccC
Q 044522           85 VGYCIEI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        85 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      .+++... ..++++|++++++|..++.+
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQK  112 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHh
Confidence            9999888 99999999999999888753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.20  E-value=1e-10  Score=84.14  Aligned_cols=79  Identities=28%  Similarity=0.298  Sum_probs=65.3

Q ss_pred             cCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      .+.||+|+||.||+|.. ..+..+++|.+.....  .    ...++..+..++|+|++++++++.+. ..++|+||+++|
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g  768 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--I----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK  768 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--c----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence            46799999999999986 4578899998865331  1    11346778889999999999999988 899999999999


Q ss_pred             Chhhhcc
Q 044522          104 SLDHNLC  110 (113)
Q Consensus       104 ~L~~~l~  110 (113)
                      +|.++++
T Consensus       769 ~L~~~l~  775 (968)
T PLN00113        769 NLSEVLR  775 (968)
T ss_pred             cHHHHHh
Confidence            9998875

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.20  E-value=4.1e-11  Score=74.20  Aligned_cols=89  Identities=22%  Similarity=0.162  Sum_probs=73.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||.|+|+.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++++.+... ..++++||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            345678999999999999865 477899999875432 124456788899999999999999999988888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+++|..++.+
T Consensus        82 ~~~~~L~~~l~~   93 (258)
T cd05578          82 LLGGDLRYHLSQ   93 (258)
T ss_pred             CCCCCHHHHHHh
Confidence            999999887753

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.20  E-value=2.7e-10  Score=71.35  Aligned_cols=90  Identities=24%  Similarity=0.316  Sum_probs=72.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC-C----cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD-G----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~-~----~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~l   95 (113)
                      ..+.+.+.||+|+||.||++.... +    ..+++|....... ......+.+|+..+..+.|+|++++++.+.....++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEE
Confidence            445667889999999999998532 2    2578888765432 345567889999999999999999999988778889


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++.+
T Consensus        86 v~e~~~~g~L~~~l~~  101 (279)
T cd05057          86 ITQLMPLGCLLDYVRN  101 (279)
T ss_pred             EEecCCCCcHHHHHHh
Confidence            9999999999988754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=2.5e-10  Score=70.66  Aligned_cols=87  Identities=24%  Similarity=0.260  Sum_probs=73.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.+|.|+|+.+|.+... .+..+++|.+....  ......+.+|+.++..++|+|++++++..... ..++++||+
T Consensus         5 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             eEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            445678999999999999864 46779999987654  34556788999999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|..++..
T Consensus        83 ~~~~l~~~~~~   93 (262)
T cd06613          83 GGGSLQDIYQV   93 (262)
T ss_pred             CCCcHHHHHHh
Confidence            99999887654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.20  E-value=4.4e-11  Score=74.99  Aligned_cols=87  Identities=22%  Similarity=0.179  Sum_probs=70.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++.+++..+ ..++++||+.
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   83 (286)
T cd07846           4 ENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVD   83 (286)
T ss_pred             eEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCC
Confidence            45678999999999999875 478899998765332123345677899999999999999999999888 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      ++.+..+..
T Consensus        84 ~~~l~~~~~   92 (286)
T cd07846          84 HTVLDDLEK   92 (286)
T ss_pred             ccHHHHHHh
Confidence            988877654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.20  E-value=3e-10  Score=71.24  Aligned_cols=89  Identities=26%  Similarity=0.320  Sum_probs=72.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ..+.+.+.||+|+||.||+|...      .+..+++|.+..... ......+..|+.++..++|+|++++++++... ..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            44567788999999999999752      145799999875431 23345678899999999999999999999888 89


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+.+++|..++.
T Consensus        84 ~~~~e~~~~~~l~~~l~  100 (283)
T cd05091          84 SMIFSYCSHSDLHEFLV  100 (283)
T ss_pred             EEEEEcCCCCcHHHHHH
Confidence            99999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.20  E-value=3.6e-10  Score=70.07  Aligned_cols=84  Identities=27%  Similarity=0.424  Sum_probs=66.5

Q ss_pred             CccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEecC
Q 044522           27 KTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYGYP  100 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e~~  100 (113)
                      +.||+|+||.||++...    ....+++|.+..... ......+.+|+.+++.++|+|++++++.+...  ..++++||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   79 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM   79 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence            36899999999999752    234688998754321 34556788899999999999999999987643  688999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|..++.+
T Consensus        80 ~~~~L~~~~~~   90 (262)
T cd05058          80 KHGDLRNFIRS   90 (262)
T ss_pred             CCCCHHHHHHh
Confidence            99999988754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.20  E-value=1.6e-10  Score=73.17  Aligned_cols=87  Identities=20%  Similarity=0.199  Sum_probs=72.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||.|.+|.||++... .+..+++|.+....  ......+.+|+..+..+.|+|++++.+.+... ..++++||+
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            445678999999999999853 57889999887543  23445678899999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|..++.+
T Consensus        99 ~~~~L~~~~~~  109 (296)
T cd06655          99 AGGSLTDVVTE  109 (296)
T ss_pred             CCCcHHHHHHh
Confidence            99999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.20  E-value=1.4e-10  Score=74.35  Aligned_cols=88  Identities=16%  Similarity=0.205  Sum_probs=68.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~l   95 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+............+.+|+.+++.++|+|++++.+++...      ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            345678999999999999864 578899998874321123445678899999999999999999887542      4799


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+. ++|..++.+
T Consensus        82 v~e~~~-~~L~~~l~~   96 (338)
T cd07859          82 VFELME-SDLHQVIKA   96 (338)
T ss_pred             EEecCC-CCHHHHHHh
Confidence            999996 578776643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.19  E-value=3.5e-10  Score=70.30  Aligned_cols=88  Identities=25%  Similarity=0.328  Sum_probs=70.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-------HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-------AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-------~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .++..||+|++|.||.+... .+..+++|.+......       ......+.+|+.++..++|+|++++.+.+... ..+
T Consensus         3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (267)
T cd06628           3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN   82 (267)
T ss_pred             cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence            35678999999999999864 4678999987643210       11235577899999999999999999999888 899


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+++++|..++.+
T Consensus        83 lv~e~~~~~~L~~~l~~   99 (267)
T cd06628          83 IFLEYVPGGSVAALLNN   99 (267)
T ss_pred             EEEEecCCCCHHHHHHh
Confidence            99999999999888754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.19  E-value=2.1e-10  Score=71.90  Aligned_cols=86  Identities=27%  Similarity=0.330  Sum_probs=69.0

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|++|.||++... .+..+++|.+............+.+|+.++..++|+|++++++.+..+ ..++++||+.
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (285)
T cd07861           3 TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS   82 (285)
T ss_pred             eEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC
Confidence            34577999999999999864 578899998865432122345677899999999999999999999988 9999999997


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                       ++|..++.
T Consensus        83 -~~l~~~~~   90 (285)
T cd07861          83 -MDLKKYLD   90 (285)
T ss_pred             -CCHHHHHh
Confidence             57777664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.19  E-value=1.7e-11  Score=80.07  Aligned_cols=84  Identities=27%  Similarity=0.341  Sum_probs=65.7

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHH--hhCCCCccceeeeEEEec-----eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEIL--SCAQHRSLVVLVGYCIEI-----VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~--~~~~h~~i~~l~~~~~~~-----~~~   94 (113)
                      +..+.+.||+|.||.||+|.|+ |..||+|.+...+     ...+.+|.++.  ..++|.||+.+++.=...     ..+
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             eeEEEEEecCccccceeecccc-CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            4456788999999999999987 6889999988643     23455555544  456899999988755432     789


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +|++|=+.|+|++++.+
T Consensus       286 LvTdYHe~GSL~DyL~r  302 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNR  302 (513)
T ss_pred             EeeecccCCcHHHHHhh
Confidence            99999999999999875

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=3.4e-10  Score=72.14  Aligned_cols=88  Identities=24%  Similarity=0.214  Sum_probs=73.2

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      ...+.||+|++|.||.+... .+..+++|.+...... ......+..|+.++..+.|++++++++.+... ..++++||+
T Consensus         4 ~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   83 (316)
T cd05574           4 KKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYC   83 (316)
T ss_pred             EEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEec
Confidence            45677999999999999865 4788999998765321 23456688899999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|.+++.+
T Consensus        84 ~~~~L~~~~~~   94 (316)
T cd05574          84 PGGELFRLLQR   94 (316)
T ss_pred             CCCCHHHHHHh
Confidence            99999988754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.18  E-value=3.2e-10  Score=72.50  Aligned_cols=85  Identities=21%  Similarity=0.210  Sum_probs=65.4

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhh-CCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSC-AQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~-~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|+||.||.+... .+..+++|.++.... ..........|..++.. .+|++++++++.+... ..++++||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46899999999999875 477899999875321 01223345556666654 4899999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~i~~   89 (316)
T cd05620          81 GDLMFHIQD   89 (316)
T ss_pred             CcHHHHHHH
Confidence            999877653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.18  E-value=5.7e-10  Score=69.24  Aligned_cols=83  Identities=24%  Similarity=0.205  Sum_probs=69.4

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||.|.+|.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++.+.+.++ ..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999875 478899999875431 123446688899999999999999999999888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        81 ~~~l~~   86 (262)
T cd05572          81 WTILRD   86 (262)
T ss_pred             HHHHhh
Confidence            988764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.18  E-value=5.7e-10  Score=70.59  Aligned_cols=84  Identities=20%  Similarity=0.195  Sum_probs=70.1

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      -..||+|+||.||++... .+..+++|.+....  ......+.+|+.+++.++|+|++++++.+... ..++++||++++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            356999999999999864 57889999876543  34455688899999999999999999999888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++..
T Consensus       103 ~L~~~~~~  110 (292)
T cd06657         103 ALTDIVTH  110 (292)
T ss_pred             cHHHHHhc
Confidence            99887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.18  E-value=3.8e-10  Score=69.78  Aligned_cols=84  Identities=29%  Similarity=0.341  Sum_probs=69.5

Q ss_pred             CccccCCCceEEEEEeCC--C--cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALRD--G--QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~--~--~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~  102 (113)
                      +.||+|++|.||++.+..  +  ..+++|.+...... ...+.+.+|+..+..++|+|++++.+.+.....++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCC
Confidence            468999999999998632  2  36899998876531 556778899999999999999999988877778899999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++.+
T Consensus        80 ~~L~~~l~~   88 (257)
T cd05040          80 GSLLDRLRK   88 (257)
T ss_pred             CcHHHHHHh
Confidence            999988754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.18  E-value=4.1e-10  Score=70.96  Aligned_cols=88  Identities=30%  Similarity=0.424  Sum_probs=71.3

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~   93 (113)
                      .+.+.+.||+|+||.||++....      ...+++|.+..... ......+.+|+.++..+ .|+|++++.+.+... ..
T Consensus        13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   91 (293)
T cd05053          13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL   91 (293)
T ss_pred             HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence            34567889999999999987532      35689998875432 34455688899999888 799999999999888 99


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+++|+|..++.
T Consensus        92 ~li~e~~~~~~L~~~l~  108 (293)
T cd05053          92 YVVVEYAAHGNLRDFLR  108 (293)
T ss_pred             EEEEEeCCCCcHHHHHH
Confidence            99999999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.18  E-value=3.7e-10  Score=72.01  Aligned_cols=89  Identities=27%  Similarity=0.402  Sum_probs=71.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC--------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR--------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-   91 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~--------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-   91 (113)
                      .+.+.+.||+|+||.||.+...        ....+++|.+..... ......+..|+.++..+ .|+|++++++++... 
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            4457899999999999998631        134688888775322 34456688899989888 699999999999888 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+++|+|..++.+
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~  111 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRA  111 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHh
Confidence            89999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.17  E-value=4.3e-10  Score=69.41  Aligned_cols=85  Identities=26%  Similarity=0.294  Sum_probs=72.5

Q ss_pred             hHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|.||.+|++.... +..+++|.+....    ....+.+|+..++.++|+|++++.+.+... ..++++||+
T Consensus         5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            4567789999999999998754 6789999887542    256788999999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|.+++..
T Consensus        81 ~~~~L~~~l~~   91 (256)
T cd06612          81 GAGSVSDIMKI   91 (256)
T ss_pred             CCCcHHHHHHh
Confidence            99999988753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.17  E-value=3.3e-10  Score=71.66  Aligned_cols=85  Identities=19%  Similarity=0.142  Sum_probs=71.1

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ....||+|+||.||++... .+..+++|.+....  ......+.+|+..+..++|+|++++++.+..+ ..++++||+++
T Consensus        26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             hhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            3566999999999998864 47789999886543  34556688999999999999999999998888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++..
T Consensus       104 ~~L~~~~~~  112 (292)
T cd06658         104 GALTDIVTH  112 (292)
T ss_pred             CcHHHHHhc
Confidence            999887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.17  E-value=3.1e-10  Score=72.75  Aligned_cols=88  Identities=17%  Similarity=0.144  Sum_probs=67.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCC-CccceeeeEEEec-eEEEEEec
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQH-RSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h-~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... .......+..|..++..+.| ++++.+.+.+... ..++++||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   82 (324)
T cd05587           3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY   82 (324)
T ss_pred             eEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcC
Confidence            45678999999999999865 467899999875321 12334556778888888865 4577888888777 89999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|..++..
T Consensus        83 ~~~g~L~~~~~~   94 (324)
T cd05587          83 VNGGDLMYHIQQ   94 (324)
T ss_pred             CCCCcHHHHHHH
Confidence            999999887653

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.17  E-value=3.7e-10  Score=69.83  Aligned_cols=87  Identities=24%  Similarity=0.294  Sum_probs=70.4

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--c-eEEEEEec
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--I-VWLLVYGY   99 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--~-~~~lv~e~   99 (113)
                      .+.+.+|.|+||.||++... .+..+++|.+............+..|+..++.++|+|++++++.+..  . ..++++||
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~   82 (265)
T cd08217           3 EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEY   82 (265)
T ss_pred             eeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehh
Confidence            45678999999999999864 56789999887543324555678889999999999999999887754  3 68899999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++++|.+++.
T Consensus        83 ~~~~~L~~~l~   93 (265)
T cd08217          83 CEGGDLAQLIQ   93 (265)
T ss_pred             ccCCCHHHHHH
Confidence            99999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.17  E-value=3.5e-10  Score=69.99  Aligned_cols=87  Identities=33%  Similarity=0.417  Sum_probs=70.7

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVY   97 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~   97 (113)
                      ...+.+.+.||+|+||.||++... +..+++|.....    .....+.+|+.++..++|++++++.+.+...  ..++++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   79 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence            345667889999999999998754 567889987643    2345688899999999999999999876544  789999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++++|.+++.+
T Consensus        80 e~~~~~~L~~~~~~   93 (256)
T cd05082          80 EYMAKGSLVDYLRS   93 (256)
T ss_pred             ECCCCCcHHHHHHh
Confidence            99999999988754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.17  E-value=1.3e-10  Score=73.22  Aligned_cols=89  Identities=25%  Similarity=0.327  Sum_probs=70.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|++|.||++... .+..+++|.+..... ......+.+|+.+++.++|+|++++.+++... ..++++|
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            34556788999999999999865 578899999865321 12223466899999999999999999999888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+ +|..++.+
T Consensus        84 ~~~~-~L~~~~~~   95 (291)
T cd07844          84 YLDT-DLKQYMDD   95 (291)
T ss_pred             cCCC-CHHHHHHh
Confidence            9985 88877643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.17  E-value=3.7e-10  Score=70.91  Aligned_cols=90  Identities=26%  Similarity=0.223  Sum_probs=67.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~l   95 (113)
                      ..+.+.+.||+|+||.||++.+. .+.    .+++|.+..... ......+..++..+..+.|+|++++++++.....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEE
Confidence            34456788999999999999863 233    467777653321 233456777777888999999999999876557788


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++..
T Consensus        86 i~e~~~~gsL~~~l~~  101 (279)
T cd05111          86 VTQLSPLGSLLDHVRQ  101 (279)
T ss_pred             EEEeCCCCcHHHHHHh
Confidence            9999999999998754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.17  E-value=4.9e-10  Score=69.67  Aligned_cols=89  Identities=22%  Similarity=0.240  Sum_probs=70.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS---ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~l   95 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+....   ........+.+|+..+..+.|+|++++.+.+.+.   ..++
T Consensus         4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (265)
T cd06652           4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI   83 (265)
T ss_pred             ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence            345788999999999999864 47889999876421   1123456788899999999999999999987663   5789


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++++|.+++.+
T Consensus        84 v~e~~~~~~L~~~l~~   99 (265)
T cd06652          84 FMEHMPGGSIKDQLKS   99 (265)
T ss_pred             EEEecCCCcHHHHHHH
Confidence            9999999999987643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.16  E-value=1.1e-10  Score=72.57  Aligned_cols=83  Identities=28%  Similarity=0.377  Sum_probs=67.3

Q ss_pred             ccccCCCceEEEEEeCC-------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           28 TPRRGGFGAVYKGALRD-------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~-------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .||+|+||.||.+...+       +..+++|.+..... ......+.+|+.+++.++|+|++++.+.+... ..++++||
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            58999999999987532       24688887754321 23455688899999999999999999999888 89999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        81 ~~~~~L~~~l~~   92 (269)
T cd05044          81 MEGGDLLSYLRD   92 (269)
T ss_pred             cCCCcHHHHHHH
Confidence            999999988753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.16  E-value=3.9e-10  Score=69.98  Aligned_cols=87  Identities=24%  Similarity=0.191  Sum_probs=72.9

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|.+|.||++... .+..+++|.+..... ......+.+|+..+..+.|+|++++.+.+... ..++++||+.
T Consensus         4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (265)
T cd06605           4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD   82 (265)
T ss_pred             hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence            45677999999999999875 477899998876532 34456688899999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        83 ~~~L~~~~~~   92 (265)
T cd06605          83 GGSLDKILKE   92 (265)
T ss_pred             CCcHHHHHHH
Confidence            9999988754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.16  E-value=6.2e-10  Score=69.73  Aligned_cols=83  Identities=22%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||+|+||.||.+... .+..+++|.+...... ......+..|+.+++.++|++++.+.+.+... ..++++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999998754 4778999988753211 12234466789999999999999999998888 89999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        81 ~~~l~~   86 (277)
T cd05577          81 KYHIYN   86 (277)
T ss_pred             HHHHHH
Confidence            887754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.16  E-value=4.1e-10  Score=71.25  Aligned_cols=88  Identities=23%  Similarity=0.342  Sum_probs=69.8

Q ss_pred             hHhcCccccCCCceEEEEEeCC-C--cEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALRD-G--QVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~-~--~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +.+.+.||+|+||.||++.... +  ..+++|.+..... ......+.+|+.++..+ +|+|++++++.+... ..++++
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~   82 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS-ENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI   82 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC-HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence            4567889999999999998643 3  2467777764221 34456688899988888 799999999999888 899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++++|.+++.+
T Consensus        83 e~~~~~~L~~~l~~   96 (297)
T cd05089          83 EYAPYGNLLDFLRK   96 (297)
T ss_pred             EecCCCcHHHHHHh
Confidence            99999999988753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.16  E-value=9.1e-10  Score=67.76  Aligned_cols=88  Identities=28%  Similarity=0.408  Sum_probs=73.9

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|.+|.+|++... .+..+++|.+............+.+|+.++..+.|++++++.+++... ..++++||+.
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (254)
T cd06627           3 QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAE   82 (254)
T ss_pred             eeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCC
Confidence            45678999999999999864 467899999876543235566788999999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        83 ~~~L~~~~~~   92 (254)
T cd06627          83 NGSLRQIIKK   92 (254)
T ss_pred             CCcHHHHHHh
Confidence            9999887653

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.16  E-value=2.8e-10  Score=70.35  Aligned_cols=86  Identities=33%  Similarity=0.422  Sum_probs=70.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecC
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYP  100 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~  100 (113)
                      ..+.+.+.||+|+||.||.+.. .+..+++|.+....    ....+.+|+.++..++|+|++++.+.+.....++++||+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~   80 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELM   80 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECC
Confidence            4456788999999999999864 46678999886532    234678899999999999999999988766778999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|.+++..
T Consensus        81 ~~~~L~~~l~~   91 (254)
T cd05083          81 SKGNLVNFLRT   91 (254)
T ss_pred             CCCCHHHHHHh
Confidence            99999988753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.15  E-value=1.4e-11  Score=82.98  Aligned_cols=91  Identities=18%  Similarity=0.211  Sum_probs=74.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWL   94 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~   94 (113)
                      +...+.++||+|+|..||+|++. .|..||...++....  .......|.+|+.+++.+.|+||++++..|.+.   .+-
T Consensus        40 Ry~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in  119 (632)
T KOG0584|consen   40 RYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTIN  119 (632)
T ss_pred             ceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceee
Confidence            34457889999999999999964 477777666654332  244567899999999999999999999999887   488


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +|+|.+..|+|..|+.+
T Consensus       120 ~iTEL~TSGtLr~Y~kk  136 (632)
T KOG0584|consen  120 FITELFTSGTLREYRKK  136 (632)
T ss_pred             eeeecccCCcHHHHHHH
Confidence            99999999999998764

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.15  E-value=1.2e-09  Score=68.01  Aligned_cols=89  Identities=22%  Similarity=0.254  Sum_probs=70.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch---hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA---CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~l   95 (113)
                      +...+.+|+|+||.||++... .+..+++|.+.....   ..+....+.+|+.++..++|+|++++.+.+...   ..++
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence            445788999999999999864 477899998764321   123455678899999999999999999987653   6889


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++++|.+++.+
T Consensus        84 ~~e~~~~~~L~~~l~~   99 (266)
T cd06651          84 FMEYMPGGSVKDQLKA   99 (266)
T ss_pred             EEeCCCCCcHHHHHHH
Confidence            9999999999887754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.15  E-value=4.5e-10  Score=72.13  Aligned_cols=88  Identities=22%  Similarity=0.189  Sum_probs=69.2

Q ss_pred             HhcCccccCCCceEEEEEe----CCCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           24 TLGKTPRRGGFGAVYKGAL----RDGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~----~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.||+|+||.||.+..    ..+..+++|.+.....  .......+..|+.++..+ .|++++.+.+.+... ..++
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (332)
T cd05614           3 ELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHL   82 (332)
T ss_pred             eEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEE
Confidence            4567899999999998764    2467899999875321  122345577888888888 589999999988888 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+.+|+|..++.+
T Consensus        83 v~e~~~~g~L~~~l~~   98 (332)
T cd05614          83 ILDYVSGGEMFTHLYQ   98 (332)
T ss_pred             EEeCCCCCcHHHHHHH
Confidence            9999999999887753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.15  E-value=7.4e-13  Score=81.10  Aligned_cols=89  Identities=20%  Similarity=0.189  Sum_probs=74.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.++||+|.|+.|+++... .|..+++|.++.........+.+-+|+.+.+.++|||+++|....... ..++|+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            45667889999999999998854 577888888876554345667788999999999999999999888877 9999999


Q ss_pred             cCCCCChhhhc
Q 044522           99 YPCNGSLDHNL  109 (113)
Q Consensus        99 ~~~~g~L~~~l  109 (113)
                      ++.|++|..-|
T Consensus        91 ~m~G~dl~~eI  101 (355)
T KOG0033|consen   91 LVTGGELFEDI  101 (355)
T ss_pred             cccchHHHHHH
Confidence            99999987654

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.15  E-value=1.2e-09  Score=68.74  Aligned_cols=84  Identities=20%  Similarity=0.158  Sum_probs=70.4

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      -+.||+|++|.+|++... .+..+++|.+....  ......+.+|+.+++.+.|+|++++++.+... ..++++||+.++
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             ceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            467999999999999864 57789999886543  34445678899999999999999999998888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++.+
T Consensus       102 ~L~~~~~~  109 (285)
T cd06648         102 ALTDIVTH  109 (285)
T ss_pred             CHHHHHHh
Confidence            99887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.15  E-value=4.4e-10  Score=69.44  Aligned_cols=89  Identities=21%  Similarity=0.258  Sum_probs=70.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e~   99 (113)
                      +.+.+.+|+|+++.||.+... .+..+++|.+............+.+|+.+++.++|+|++++.+.+...  ..++++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            456788999999999999864 467899999875432234455678888999999999999998876543  68899999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        82 ~~~~~l~~~l~~   93 (257)
T cd08223          82 CEGGDLYHKLKE   93 (257)
T ss_pred             cCCCcHHHHHHH
Confidence            999999887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.15  E-value=1.1e-10  Score=80.78  Aligned_cols=86  Identities=27%  Similarity=0.321  Sum_probs=70.6

Q ss_pred             HhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEE-E-----e-c-eE
Q 044522           24 TLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYC-I-----E-I-VW   93 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~-~-----~-~-~~   93 (113)
                      .+.+.|.+|+|+.||.+.... +..+|+|.+-..+  ......+.+|+.+|+.+. |+|||.+++.. .     . . ++
T Consensus        40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d--e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev  117 (738)
T KOG1989|consen   40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND--EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV  117 (738)
T ss_pred             EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC--HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence            356789999999999998754 4889999876654  677888999999999995 99999999832 1     1 2 78


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      +|+||||.+|.|.++|..
T Consensus       118 llLmEyC~gg~Lvd~mn~  135 (738)
T KOG1989|consen  118 LLLMEYCKGGSLVDFMNT  135 (738)
T ss_pred             EeehhhccCCcHHHHHHH
Confidence            899999999999988763

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1e-09  Score=68.22  Aligned_cols=89  Identities=25%  Similarity=0.283  Sum_probs=70.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS---ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~---~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~l   95 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+....   ........+.+|+.++..++|+|++++.+.+.+.   ..++
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence            346788999999999999864 47789999875321   1133456788899999999999999999988764   5789


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++++|.+++.+
T Consensus        84 v~e~~~~~~L~~~~~~   99 (264)
T cd06653          84 FVEYMPGGSIKDQLKA   99 (264)
T ss_pred             EEEeCCCCcHHHHHHH
Confidence            9999999999887653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.14  E-value=1e-09  Score=69.00  Aligned_cols=87  Identities=24%  Similarity=0.224  Sum_probs=73.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+...+.+|+|.+|.+|.+... .+..+++|.+....   .....+.+|+..+..++|+|++++.+.+... ..++++||
T Consensus        20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK---QNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCc---hhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            3455678999999999999875 57789999988654   2455678899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++..
T Consensus        97 ~~~~~L~~~l~~  108 (286)
T cd06614          97 MDGGSLTDIITQ  108 (286)
T ss_pred             cCCCcHHHHHHH
Confidence            999999988764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.14  E-value=5.8e-10  Score=71.44  Aligned_cols=88  Identities=17%  Similarity=0.152  Sum_probs=66.7

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEec
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... ..........|..++..+ .|++++.+.+.+... ..++++||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   82 (323)
T cd05616           3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEY   82 (323)
T ss_pred             eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcC
Confidence            45678999999999999865 467899999875321 112233455666666666 578899999988888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|..++..
T Consensus        83 ~~~g~L~~~~~~   94 (323)
T cd05616          83 VNGGDLMYQIQQ   94 (323)
T ss_pred             CCCCCHHHHHHH
Confidence            999999877643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.14  E-value=5.6e-10  Score=70.75  Aligned_cols=85  Identities=19%  Similarity=0.142  Sum_probs=70.0

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ....||+|+||.||.+... .+..+++|.+....  ......+.+|+..+..+.|+|++++++.+..+ ..++++||+++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            3456999999999999864 57889999987543  23345677889999999999999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|..++.+
T Consensus       103 ~~L~~~~~~  111 (297)
T cd06659         103 GALTDIVSQ  111 (297)
T ss_pred             CCHHHHHhh
Confidence            999876643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.14  E-value=7.9e-10  Score=68.06  Aligned_cols=88  Identities=20%  Similarity=0.281  Sum_probs=73.6

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||.|++|.+|.+... .+..+++|.+............+.+|+.+++.++|+|++++.+..... ..++++||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~   82 (258)
T cd08215           3 EIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYAD   82 (258)
T ss_pred             eEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecC
Confidence            34577999999999999864 477899999876543235566788899999999999999999998888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|..++.+
T Consensus        83 ~~~L~~~l~~   92 (258)
T cd08215          83 GGDLSQKIKK   92 (258)
T ss_pred             CCcHHHHHHH
Confidence            9999887754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.13  E-value=3.9e-10  Score=76.24  Aligned_cols=90  Identities=19%  Similarity=0.116  Sum_probs=71.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--------   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--------   91 (113)
                      ..|.+.+.||+|+||.||++... .+..+|+|.+............+.+|+.++..+.|+|++++...+...        
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            45667889999999999999854 588999999876543344556678899999999999999987665322        


Q ss_pred             -eEEEEEecCCCCChhhhcc
Q 044522           92 -VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~  110 (113)
                       ..++++||+.+|+|.+++.
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~  131 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIK  131 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHH
Confidence             3679999999999988775

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.13  E-value=1.1e-09  Score=67.89  Aligned_cols=87  Identities=24%  Similarity=0.215  Sum_probs=73.6

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|+++.+|++... .+..+++|.+..... ......+.+|+..+..++|+|++++.+.+... ..++++||++
T Consensus         4 ~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06623           4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD-EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD   82 (264)
T ss_pred             eeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc-hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence            45678999999999999875 478899998876542 24456788999999999999999999999988 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++.+
T Consensus        83 ~~~L~~~l~~   92 (264)
T cd06623          83 GGSLADLLKK   92 (264)
T ss_pred             CCcHHHHHHH
Confidence            9999988753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.13  E-value=1.3e-09  Score=68.69  Aligned_cols=83  Identities=23%  Similarity=0.199  Sum_probs=68.0

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEEecCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVYGYPC  101 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~e~~~  101 (113)
                      .+.||.|.+|.||.+... .+..+++|.+..... ......+.+|+..+..++|+|++++++.+...   ..++++||++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~   84 (287)
T cd06621           6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCE   84 (287)
T ss_pred             EEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecC
Confidence            467999999999999874 477899998875432 24456688899999999999999999988653   6899999999


Q ss_pred             CCChhhhc
Q 044522          102 NGSLDHNL  109 (113)
Q Consensus       102 ~g~L~~~l  109 (113)
                      +++|.+++
T Consensus        85 ~~~L~~~l   92 (287)
T cd06621          85 GGSLDSIY   92 (287)
T ss_pred             CCCHHHHH
Confidence            99997764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.13  E-value=4.5e-10  Score=72.00  Aligned_cols=87  Identities=17%  Similarity=0.148  Sum_probs=67.0

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.||+|+||.||.+... .+..+|+|.+..... .......+..|..++..+. |++++.+.+.+... ..++++||+
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~   83 (323)
T cd05615           4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYV   83 (323)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCC
Confidence            4577999999999999864 578899999875321 1223445667777777775 56777888888877 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|..++.+
T Consensus        84 ~~g~L~~~i~~   94 (323)
T cd05615          84 NGGDLMYHIQQ   94 (323)
T ss_pred             CCCcHHHHHHH
Confidence            99999887653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.13  E-value=9e-10  Score=69.02  Aligned_cols=90  Identities=24%  Similarity=0.301  Sum_probs=70.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~l   95 (113)
                      ....+.+.||+|+||.||++.+. .+.    .+++|.+..... ......+.+|+..+..+.|+|++.+.+.+.....++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence            34456688999999999999853 333    478898865432 344566888888999999999999999887667778


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.++++.
T Consensus        86 ~~~~~~~g~l~~~l~~  101 (279)
T cd05109          86 VTQLMPYGCLLDYVRE  101 (279)
T ss_pred             EEEcCCCCCHHHHHhh
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.13  E-value=5.6e-10  Score=70.09  Aligned_cols=87  Identities=22%  Similarity=0.219  Sum_probs=67.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEE-----ec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCI-----EI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~-----~~-~   92 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....   .....+.+|+.++..+ +|+|++++++.+.     .. .
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            34456788999999999999864 46789999876432   2234566788888888 6999999999874     23 6


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+++++|..++.
T Consensus        95 ~~lv~e~~~~~~L~~~l~  112 (286)
T cd06638          95 LWLVLELCNGGSVTDLVK  112 (286)
T ss_pred             EEEEEeecCCCCHHHHHH
Confidence            899999999999987653

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.13  E-value=2.4e-10  Score=71.72  Aligned_cols=88  Identities=20%  Similarity=0.205  Sum_probs=70.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|.+|.+|++... .+..+++|.++...........+.+|+.+++.+.|+|++++.+.+... ..++++||+
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   82 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV   82 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence            345678999999999999875 477899998875432233446688899999999999999999999888 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      +++.+..++.
T Consensus        83 ~~~~l~~~~~   92 (288)
T cd07833          83 ERTLLELLEA   92 (288)
T ss_pred             CCCHHHHHHh
Confidence            9877665443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.12  E-value=1.2e-09  Score=68.13  Aligned_cols=86  Identities=26%  Similarity=0.313  Sum_probs=67.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe------c-eE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE------I-VW   93 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~------~-~~   93 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+....   .....+..|+..+..+ .|+|++++.+.+..      . ..
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            345577999999999999864 47789999887543   2334567788888887 69999999998864      2 57


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+++|..++..
T Consensus        85 ~iv~e~~~~~~L~~~l~~  102 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKN  102 (272)
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            899999999999987664

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.11  E-value=6.3e-10  Score=70.18  Aligned_cols=87  Identities=22%  Similarity=0.223  Sum_probs=69.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|.+|.||++... .+..+++|.+............+.+|+..++.+.|+|++++++.+... ..++++||+
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL   83 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence            445678999999999999864 577899998765432123345677899999999999999999999988 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      . +++..++.
T Consensus        84 ~-~~l~~~~~   92 (294)
T PLN00009         84 D-LDLKKHMD   92 (294)
T ss_pred             c-ccHHHHHH
Confidence            6 46766553

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.10  E-value=1.8e-09  Score=67.29  Aligned_cols=87  Identities=20%  Similarity=0.241  Sum_probs=67.8

Q ss_pred             hHhcCccccCCCceEEEEEeCC--CcEEEEEEeeccc--------hhHHHHHHHHHHHHHHhh-CCCCccceeeeEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALRD--GQVVAVKHHKVMS--------ACAQAAFQFISEDEILSC-AQHRSLVVLVGYCIEI   91 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~--~~~~~ik~~~~~~--------~~~~~~~~~~~e~~~~~~-~~h~~i~~l~~~~~~~   91 (113)
                      +.+.+.||+|+||.||.+....  +..+++|.+....        ........+..|+.++.. ++|+|++++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            3456789999999999998643  5678988875321        112344556778877764 6899999999999888


Q ss_pred             -eEEEEEecCCCCChhhhc
Q 044522           92 -VWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l  109 (113)
                       ..++++||+++++|.+++
T Consensus        82 ~~~~lv~e~~~~~~l~~~l  100 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHF  100 (269)
T ss_pred             CeEEEEEecCCCCcHHHHH
Confidence             999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.10  E-value=2.2e-09  Score=65.77  Aligned_cols=86  Identities=29%  Similarity=0.408  Sum_probs=73.3

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ...+.||+|.+|.+|++... ++..+++|.+....  ......+.+|+..+..+.|++++++.+.+... ..++++||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           3 EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLES--KEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             eeeeeeccCCceEEEEEEECCCCcEEEEEEecccc--hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            34577999999999999875 57789999987654  24566788999999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|.+++..
T Consensus        81 ~~~L~~~~~~   90 (253)
T cd05122          81 GGSLKDLLKS   90 (253)
T ss_pred             CCcHHHHHhh
Confidence            9999887754

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.10  E-value=1.2e-10  Score=77.79  Aligned_cols=84  Identities=20%  Similarity=0.193  Sum_probs=71.2

Q ss_pred             cCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      -++||+|..|.||.+.. ..+..+++|.+....  ...-+-+.+|+.+|+...|+|+|.++..+... .+++||||+++|
T Consensus       278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~gg  355 (550)
T KOG0578|consen  278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGG  355 (550)
T ss_pred             hhhhccccccceeeeeeccCCceEEEEEEEecc--CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCC
Confidence            46799999999999874 457789999998765  33445578999999999999999999888888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+.+..
T Consensus       356 sLTDvVt~  363 (550)
T KOG0578|consen  356 SLTDVVTK  363 (550)
T ss_pred             chhhhhhc
Confidence            98877653

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.10  E-value=1.4e-09  Score=67.81  Aligned_cols=86  Identities=26%  Similarity=0.372  Sum_probs=67.5

Q ss_pred             HhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------e
Q 044522           24 TLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------V   92 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~   92 (113)
                      .+.+.||+|+||.||++.+.    .+..+++|.+............+.+|+.+++.++|+|++++++.+...       .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            35678999999999999753    256799998876433244566788899999999999999999987542       2


Q ss_pred             EEEEEecCCCCChhhhc
Q 044522           93 WLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l  109 (113)
                      .+++++|+.+|+|..++
T Consensus        82 ~~~~~~~~~~~~l~~~~   98 (273)
T cd05074          82 PMVILPFMKHGDLHTFL   98 (273)
T ss_pred             eEEEEecCCCCcHHHHH
Confidence            46888999999987765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.09  E-value=9.6e-10  Score=69.80  Aligned_cols=88  Identities=30%  Similarity=0.412  Sum_probs=68.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~   97 (113)
                      ....+.||+|+||.||++.+. .+.    .+++|.+..... ......+.+|+.++..+.|+|++++++.+......+++
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~   87 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT   87 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeee
Confidence            345677999999999999853 232    468887765432 23344678899999999999999999998766667899


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++|+|.+++..
T Consensus        88 e~~~~g~l~~~~~~  101 (303)
T cd05110          88 QLMPHGCLLDYVHE  101 (303)
T ss_pred             hhcCCCCHHHHHHh
Confidence            99999999887653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.09  E-value=7.1e-10  Score=68.57  Aligned_cols=83  Identities=27%  Similarity=0.269  Sum_probs=68.5

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||.|+||.||.+... .+..+++|.+..... .......+.+|+..+..+.|+|++++.+.+... ..++++||+.+++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            588999999999875 478899999875432 123456678888999999999999999888888 89999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        81 ~~~l~~   86 (265)
T cd05579          81 ASLLEN   86 (265)
T ss_pred             HHHHHH
Confidence            887654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=1.8e-09  Score=69.40  Aligned_cols=83  Identities=23%  Similarity=0.188  Sum_probs=62.5

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC---CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA---QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~---~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ||+|+||.||++... .+..+++|.+..... ..........+..++...   .|++++.+...+... ..++++||+.+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            699999999999864 478899999864321 112233344555555443   699999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..++.+
T Consensus        81 g~L~~~l~~   89 (330)
T cd05586          81 GELFWHLQK   89 (330)
T ss_pred             ChHHHHHHh
Confidence            999877653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.09  E-value=1e-09  Score=71.59  Aligned_cols=86  Identities=16%  Similarity=0.146  Sum_probs=67.4

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLLV   96 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~lv   96 (113)
                      .+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++...      ..+++
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   82 (372)
T cd07853           3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV   82 (372)
T ss_pred             cccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence            35678999999999999864 578899998865432234456788999999999999999999888653      47899


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+. ++|..++.
T Consensus        83 ~e~~~-~~l~~~~~   95 (372)
T cd07853          83 TELMQ-SDLHKIIV   95 (372)
T ss_pred             eeccc-cCHHHHHh
Confidence            99987 46766554

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.09  E-value=8.9e-10  Score=69.06  Aligned_cols=85  Identities=22%  Similarity=0.292  Sum_probs=68.3

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||.|++|.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++.+.+... ..++++||+.
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (284)
T cd07836           3 KQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD   81 (284)
T ss_pred             eEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence            45678999999999999875 477899998875431 22334566788999999999999999999988 8999999998


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      + +|..++.
T Consensus        82 ~-~l~~~~~   89 (284)
T cd07836          82 K-DLKKYMD   89 (284)
T ss_pred             c-cHHHHHH
Confidence            5 7777654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.08  E-value=6.9e-10  Score=76.67  Aligned_cols=89  Identities=29%  Similarity=0.341  Sum_probs=74.3

Q ss_pred             HhcCccccCCCceEEEEEeC----C----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eE
Q 044522           24 TLGKTPRRGGFGAVYKGALR----D----GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~----~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~   93 (113)
                      .+.+.+|+|.||.|++|...    .    ...+|+|.++.... ....+.+..|+.+|..+ .|+|++.++|+|... ..
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~-~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~  377 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS-SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL  377 (609)
T ss_pred             cccceeecccccceEeEEEeecccccccceEEEEEEecccccC-cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence            56679999999999999741    1    34689998886543 35667789999999988 599999999999998 99


Q ss_pred             EEEEecCCCCChhhhccCCC
Q 044522           94 LLVYGYPCNGSLDHNLCGPN  113 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~~~  113 (113)
                      +++.||+.+|+|..+++..+
T Consensus       378 ~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  378 YVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             EEEEEeccCCcHHHHHHhcc
Confidence            99999999999999988653

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.08  E-value=4.7e-10  Score=70.36  Aligned_cols=86  Identities=22%  Similarity=0.273  Sum_probs=68.5

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ...+.||.|++|.||++... .+..+++|.+............+.+|+..+..++|+|++++.+.+... ..++++||+.
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (284)
T cd07860           3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   82 (284)
T ss_pred             eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence            34567999999999999864 477899998865432122335678899999999999999999999888 9999999996


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                       ++|..++.
T Consensus        83 -~~l~~~~~   90 (284)
T cd07860          83 -QDLKKFMD   90 (284)
T ss_pred             -cCHHHHHH
Confidence             57777654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.08  E-value=4.1e-10  Score=70.29  Aligned_cols=89  Identities=19%  Similarity=0.166  Sum_probs=72.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEe
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      +.+.+.||+|++|.||++... .+..+++|.+..... .......+.+|..++..+. |+|++++++.+... ..++++|
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE   82 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence            456778999999999999865 578899998865321 1233456778888999998 99999999998888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      ++.+++|.+++.+
T Consensus        83 ~~~~~~L~~~l~~   95 (280)
T cd05581          83 YAPNGELLQYIRK   95 (280)
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999888754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.07  E-value=1.4e-09  Score=68.16  Aligned_cols=85  Identities=18%  Similarity=0.145  Sum_probs=63.7

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||++... .+..+++|.++.... ......+..|.. .++..+|+|++++++.+... ..++++||+
T Consensus         4 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~   82 (283)
T cd06617           4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM   82 (283)
T ss_pred             eEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence            45677999999999999865 588899999876432 122234444544 46667899999999999888 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      + |+|..++.
T Consensus        83 ~-~~l~~~l~   91 (283)
T cd06617          83 D-TSLDKFYK   91 (283)
T ss_pred             c-ccHHHHHH
Confidence            7 56665543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.07  E-value=2.2e-10  Score=77.55  Aligned_cols=76  Identities=22%  Similarity=0.374  Sum_probs=63.5

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      +=||.|+-|.||.|.+. +..||||.++...         --++..++.+.|+||+.+.|+|.+. -.+|+|||+..|.|
T Consensus       130 eWlGSGaQGAVF~Grl~-netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL  199 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLH-NETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL  199 (904)
T ss_pred             hhhccCcccceeeeecc-CceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence            34899999999999875 5789998776432         1256778999999999999999998 78899999999999


Q ss_pred             hhhccCC
Q 044522          106 DHNLCGP  112 (113)
Q Consensus       106 ~~~l~~~  112 (113)
                      .+.++..
T Consensus       200 ~~VLka~  206 (904)
T KOG4721|consen  200 YEVLKAG  206 (904)
T ss_pred             HHHHhcc
Confidence            9988754

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.07  E-value=9.2e-10  Score=69.01  Aligned_cols=86  Identities=21%  Similarity=0.253  Sum_probs=69.4

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.+.||.|.+|.||++... .+..+++|.+............+.+|+..+..++|++++++++.+.+. ..++++||++ 
T Consensus         3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-   81 (283)
T cd07835           3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-   81 (283)
T ss_pred             hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence            4577999999999999864 588899998875432123345677899999999999999999999888 9999999995 


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|..++..
T Consensus        82 ~~l~~~~~~   90 (283)
T cd07835          82 LDLKKYMDS   90 (283)
T ss_pred             cCHHHHHhh
Confidence            578877643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.06  E-value=3.7e-09  Score=65.05  Aligned_cols=88  Identities=28%  Similarity=0.336  Sum_probs=72.7

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEEec
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVYGY   99 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~e~   99 (113)
                      ...+.||+|++|.+|++... .+..+++|.+............+.+|+..++.++|+|++++.+.....   ..++++||
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   82 (260)
T cd06606           3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY   82 (260)
T ss_pred             eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence            34677999999999999875 578899999876543234567788999999999999999999888764   68899999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+++|.+++.+
T Consensus        83 ~~~~~L~~~~~~   94 (260)
T cd06606          83 VSGGSLSSLLKK   94 (260)
T ss_pred             cCCCcHHHHHHH
Confidence            999999988754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.06  E-value=2e-09  Score=67.80  Aligned_cols=88  Identities=24%  Similarity=0.195  Sum_probs=69.5

Q ss_pred             HhcCccccCCCceEEEEEe----CCCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           24 TLGKTPRRGGFGAVYKGAL----RDGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~----~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.||.|+||.||.+..    ..+..+++|.+.....  .......+..|+.++..+ +|++++.+.+.+... ..++
T Consensus         3 ~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (290)
T cd05613           3 ELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHL   82 (290)
T ss_pred             eeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEE
Confidence            4567899999999999875    2477899999875321  112345577888889888 689999999888888 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++++|.+++..
T Consensus        83 v~e~~~~~~L~~~l~~   98 (290)
T cd05613          83 ILDYINGGELFTHLSQ   98 (290)
T ss_pred             EEecCCCCcHHHHHHH
Confidence            9999999999988753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.06  E-value=1.1e-10  Score=68.91  Aligned_cols=79  Identities=19%  Similarity=0.193  Sum_probs=66.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.-.++||+|.+|.|+++..+ ..+.+++|.++.+..+........+|+.+++.+.|.|+++++.+..+. ...+|+||+
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            345678999999999999865 467799999987654334456678899999999999999999999998 899999998


Q ss_pred             C
Q 044522          101 C  101 (113)
Q Consensus       101 ~  101 (113)
                      .
T Consensus        84 d   84 (292)
T KOG0662|consen   84 D   84 (292)
T ss_pred             h
Confidence            6

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.06  E-value=1.4e-09  Score=71.61  Aligned_cols=80  Identities=19%  Similarity=0.079  Sum_probs=65.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|....        ..+.+|+.++..++|+|++++++.+... ..++++|+
T Consensus        93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            3556788999999999999864 477899986431        2356899999999999999999999888 89999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +. ++|..++.
T Consensus       165 ~~-~~L~~~l~  174 (391)
T PHA03212        165 YK-TDLYCYLA  174 (391)
T ss_pred             CC-CCHHHHHH
Confidence            86 57776654

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.05  E-value=6e-11  Score=75.26  Aligned_cols=85  Identities=16%  Similarity=0.233  Sum_probs=72.0

Q ss_pred             cCccccCCCceEEEEE-eCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ++.||+|.++.|-.+. ...+..+|+|++....  ........+|+.++... .|+|+++|+.++.+. ..|+|+|=|.|
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G  160 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG  160 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence            5779999999999887 4568899999997653  35556678899877655 799999999999999 99999999999


Q ss_pred             CChhhhccCC
Q 044522          103 GSLDHNLCGP  112 (113)
Q Consensus       103 g~L~~~l~~~  112 (113)
                      |.|...|++.
T Consensus       161 GplLshI~~~  170 (463)
T KOG0607|consen  161 GPLLSHIQKR  170 (463)
T ss_pred             chHHHHHHHh
Confidence            9999988754

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.05  E-value=3.5e-09  Score=67.33  Aligned_cols=86  Identities=26%  Similarity=0.237  Sum_probs=69.0

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +...+.||+|.||.||.+... .+..+++|.+.... ........+.+|+.++..++|+|++++.+.+... ..++++||
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   96 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY   96 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHh
Confidence            556788999999999999864 57889999886432 1134456688899999999999999999999988 99999999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +. |++.+++
T Consensus        97 ~~-g~l~~~~  105 (307)
T cd06607          97 CL-GSASDIL  105 (307)
T ss_pred             hC-CCHHHHH
Confidence            97 4555544

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.05  E-value=7.4e-10  Score=68.30  Aligned_cols=88  Identities=22%  Similarity=0.275  Sum_probs=71.7

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.+|+|+++.+|++... .+..+++|.+............+..|+.+++.++|+|++++.+.+... ..++++||++
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd08530           3 KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAP   82 (256)
T ss_pred             eEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcC
Confidence            45677999999999998754 567899998875432234455677889999999999999999888888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +++|..++.+
T Consensus        83 ~~~L~~~~~~   92 (256)
T cd08530          83 FGDLSKAISK   92 (256)
T ss_pred             CCCHHHHHHH
Confidence            9999887643

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.04  E-value=2.3e-09  Score=68.88  Aligned_cols=90  Identities=22%  Similarity=0.261  Sum_probs=69.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHH------------HHHHHHHHHHHHhhCCCCccceeeeE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQ------------AAFQFISEDEILSCAQHRSLVVLVGY   87 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~i~~l~~~   87 (113)
                      +...+.+.||.|+||.||++... .+..+++|.+........            ....+.+|+.++..+.|+|+++++++
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV   88 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence            33456788999999999999864 578899998865431110            01246789999999999999999999


Q ss_pred             EEec-eEEEEEecCCCCChhhhccC
Q 044522           88 CIEI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        88 ~~~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      +... ..++++||+. |+|.+++..
T Consensus        89 ~~~~~~~~lv~e~~~-~~l~~~l~~  112 (335)
T PTZ00024         89 YVEGDFINLVMDIMA-SDLKKVVDR  112 (335)
T ss_pred             EecCCcEEEEEeccc-cCHHHHHHh
Confidence            9888 9999999997 578777643

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.04  E-value=1.5e-09  Score=68.43  Aligned_cols=86  Identities=24%  Similarity=0.345  Sum_probs=67.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.++..++|+|++++.+++... ..++++||+
T Consensus         7 y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~   85 (291)
T cd07870           7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM   85 (291)
T ss_pred             eEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence            445678999999999999864 477899998865321 12233566788899999999999999999888 899999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      . +++..++.
T Consensus        86 ~-~~l~~~~~   94 (291)
T cd07870          86 H-TDLAQYMI   94 (291)
T ss_pred             c-CCHHHHHH
Confidence            6 56665543

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.04  E-value=7.5e-09  Score=66.16  Aligned_cols=86  Identities=24%  Similarity=0.214  Sum_probs=68.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +...+.||+|+||.+|++... .+..+++|.+..... .......+.+|+.+++.++|+|++++.+.+... ..++++||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            445677999999999999864 577899998864321 134456688899999999999999999999988 89999999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +.+ ++.+.+
T Consensus       107 ~~g-~l~~~~  115 (317)
T cd06635         107 CLG-SASDLL  115 (317)
T ss_pred             CCC-CHHHHH
Confidence            974 666554

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=5.5e-09  Score=65.00  Aligned_cols=87  Identities=24%  Similarity=0.284  Sum_probs=70.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-------   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-------   91 (113)
                      ..+.+.+.||+|.+|.+|.+... .+..+++|.+....   .....+.+|+.++..+ .|+|++++++.+...       
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            44567788999999999999874 46789999887653   2335678899988888 799999999998654       


Q ss_pred             eEEEEEecCCCCChhhhcc
Q 044522           92 VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~  110 (113)
                      ..++++||+.+++|.+++.
T Consensus        83 ~~~lv~e~~~~~~L~~~~~  101 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVK  101 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHH
Confidence            4899999999999887764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.03  E-value=4.2e-09  Score=66.44  Aligned_cols=89  Identities=20%  Similarity=0.222  Sum_probs=68.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv   96 (113)
                      ..+.+.+.||.|.||.||++... .+..+++|.++...........+.+|+..+..+.|+|++++.+++...   ..+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            35566788999999999999875 477899998875432122234566788999999999999999887654   79999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+ +|..++.
T Consensus        85 ~e~~~~-~L~~~~~   97 (293)
T cd07843          85 MEYVEH-DLKSLME   97 (293)
T ss_pred             ehhcCc-CHHHHHH
Confidence            999974 7776654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.03  E-value=2.2e-09  Score=68.27  Aligned_cols=86  Identities=20%  Similarity=0.041  Sum_probs=67.0

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +++.+|.|+++.++++.. .+..+++|.+............+..|+..+..++|+|++++++.+... ..++++||+++|
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            455555555555555543 578899999876532245667788999999999999999999999888 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++.+
T Consensus        85 ~l~~~l~~   92 (314)
T cd08216          85 SCEDLLKT   92 (314)
T ss_pred             CHHHHHHH
Confidence            99888753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.03  E-value=5.3e-09  Score=65.60  Aligned_cols=87  Identities=25%  Similarity=0.298  Sum_probs=68.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe------c-e
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE------I-V   92 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~------~-~   92 (113)
                      .+.+.+.+|.|+||.||.+... .+..+++|......   .....+..|+.++..+ +|+|++++++.+..      . .
T Consensus        17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   93 (282)
T cd06636          17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ   93 (282)
T ss_pred             hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence            4456678999999999999864 47789999876542   3334567788877777 79999999988742      3 7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|.+++..
T Consensus        94 ~~iv~e~~~~~~L~~~~~~  112 (282)
T cd06636          94 LWLVMEFCGAGSVTDLVKN  112 (282)
T ss_pred             EEEEEEeCCCCcHHHHHHH
Confidence            8999999999999887753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.01  E-value=8.3e-10  Score=72.83  Aligned_cols=84  Identities=29%  Similarity=0.357  Sum_probs=66.4

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHH--hhCCCCccceeeeEEEe----c-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEIL--SCAQHRSLVVLVGYCIE----I-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~--~~~~h~~i~~l~~~~~~----~-~~~   94 (113)
                      ...+.+.+|+|.||.||+|.+. ++.||||.++.     +..+.|+.|-.+.  -.+.|+|++++++.-..    . ..+
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc-CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            3456788999999999999875 48899999984     4455566665544  45689999999887643    3 788


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +|++|-+.|+|.+++..
T Consensus       285 LVt~fh~kGsL~dyL~~  301 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKA  301 (534)
T ss_pred             EEeeeccCCcHHHHHHh
Confidence            99999999999999863

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.01  E-value=3.6e-09  Score=66.62  Aligned_cols=87  Identities=23%  Similarity=0.256  Sum_probs=62.1

Q ss_pred             hHhcCccccCCCceEEEEEeC--CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC---CCCccceeeeEEEe-----c-
Q 044522           23 STLGKTPRRGGFGAVYKGALR--DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA---QHRSLVVLVGYCIE-----I-   91 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~---~h~~i~~l~~~~~~-----~-   91 (113)
                      |.+.+.||+|+||.||++...  ++..+++|.+............+.+|+..+..+   .|+|++++++++..     . 
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~   82 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   82 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence            456788999999999999863  367799998875432122233445566555544   79999999998852     3 


Q ss_pred             eEEEEEecCCCCChhhhcc
Q 044522           92 VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~  110 (113)
                      ..++++||+. ++|..++.
T Consensus        83 ~~~lv~e~~~-~~l~~~~~  100 (290)
T cd07862          83 KLTLVFEHVD-QDLTTYLD  100 (290)
T ss_pred             cEEEEEccCC-CCHHHHHH
Confidence            6899999997 57777664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.01  E-value=5.7e-10  Score=69.98  Aligned_cols=86  Identities=20%  Similarity=0.210  Sum_probs=67.8

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.+.||+|.||.||++... .+..+++|.+............+.+|+.++..++|+|++++.+.+.+. ..++++||+.
T Consensus         3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (284)
T cd07839           3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD   82 (284)
T ss_pred             eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC
Confidence            35577999999999999874 477899998875432122334567889999999999999999999888 9999999997


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      + +|..++.
T Consensus        83 ~-~l~~~~~   90 (284)
T cd07839          83 Q-DLKKYFD   90 (284)
T ss_pred             C-CHHHHHH
Confidence            4 6776654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=8.5e-09  Score=63.94  Aligned_cols=85  Identities=20%  Similarity=0.207  Sum_probs=63.5

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.||+|++|.||++... .+..+++|.++.... .......+..+.. ......|+|++++++.+... ..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999864 477899998865321 1122233344443 34455899999999999888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|..++.+
T Consensus        82 ~~L~~~l~~   90 (260)
T cd05611          82 GDCASLIKT   90 (260)
T ss_pred             CCHHHHHHH
Confidence            999988753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.01  E-value=4.7e-09  Score=67.56  Aligned_cols=90  Identities=22%  Similarity=0.178  Sum_probs=69.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec---eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI---VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~---~~~l   95 (113)
                      ..+.+.+.||+|+||.+|++... .+..+++|.+............+.+|+.++..+ +|+|++++++.+...   ..++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            34567788999999999999865 477899998754321123445577899999999 999999999987643   6899


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+. ++|..++.+
T Consensus        87 v~e~~~-~~L~~~~~~  101 (337)
T cd07852          87 VFEYME-TDLHAVIRA  101 (337)
T ss_pred             Eecccc-cCHHHHHhc
Confidence            999997 488776643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.00  E-value=3.7e-09  Score=68.67  Aligned_cols=87  Identities=21%  Similarity=0.083  Sum_probs=67.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~   92 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++++++...       .
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  100 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD  100 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence            44556788999999999999864 478899999865432234456678899999999999999999987543       4


Q ss_pred             EEEEEecCCCCChhhh
Q 044522           93 WLLVYGYPCNGSLDHN  108 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~  108 (113)
                      .++++||+.+ ++...
T Consensus       101 ~~lv~e~~~~-~l~~~  115 (359)
T cd07876         101 VYLVMELMDA-NLCQV  115 (359)
T ss_pred             eEEEEeCCCc-CHHHH
Confidence            6899999976 45443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.00  E-value=8.7e-09  Score=65.79  Aligned_cols=85  Identities=26%  Similarity=0.239  Sum_probs=67.5

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ..+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..++|+|++++.+++.+. ..++++||+.
T Consensus        25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  104 (313)
T cd06633          25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL  104 (313)
T ss_pred             cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence            3567999999999999864 477899998864321 134455678899999999999999999999998 8999999996


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                       |++..++.
T Consensus       105 -~~l~~~l~  112 (313)
T cd06633         105 -GSASDLLE  112 (313)
T ss_pred             -CCHHHHHH
Confidence             46665543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=7.9e-11  Score=84.05  Aligned_cols=88  Identities=23%  Similarity=0.166  Sum_probs=72.5

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.++||+|+||.|.....+ .+..+|.|.++.+..- .....-|..|-++|..-+.++++++..++.+. +.|+||||+
T Consensus        78 eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~  157 (1317)
T KOG0612|consen   78 EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYM  157 (1317)
T ss_pred             HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecc
Confidence            45688999999999988865 4677999999876532 22344477778888888999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      +||+|..++.+
T Consensus       158 pGGDlltLlSk  168 (1317)
T KOG0612|consen  158 PGGDLLTLLSK  168 (1317)
T ss_pred             cCchHHHHHhh
Confidence            99999988764

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.00  E-value=5.4e-09  Score=68.21  Aligned_cols=84  Identities=18%  Similarity=0.039  Sum_probs=62.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC--CCcEEEEEEeeccch---hHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR--DGQVVAVKHHKVMSA---CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~l   95 (113)
                      ..+.+.+.||+|+||.||++...  .+..+++|.+.....   .......+.+|+.++..+.|+|++..+..  ....++
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--~~~~~L   95 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--TGKDGL   95 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--cCCcEE
Confidence            34667899999999999999864  466679988653210   12334568899999999999998853321  236789


Q ss_pred             EEecCCCCChh
Q 044522           96 VYGYPCNGSLD  106 (113)
Q Consensus        96 v~e~~~~g~L~  106 (113)
                      +|||+++++|.
T Consensus        96 VmE~~~G~~L~  106 (365)
T PRK09188         96 VRGWTEGVPLH  106 (365)
T ss_pred             EEEccCCCCHH
Confidence            99999999886

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.00  E-value=1.1e-09  Score=68.56  Aligned_cols=86  Identities=24%  Similarity=0.266  Sum_probs=67.0

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|++|.||+|... .+..+++|.+..... ........+|+..+..+. |+|++++++.+.+. ..++++||+
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             eeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-chhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            35678999999999999975 467899998765431 112223456788888888 99999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                       +|+|.+++..
T Consensus        81 -~~~l~~~~~~   90 (283)
T cd07830          81 -EGNLYQLMKD   90 (283)
T ss_pred             -CCCHHHHHHh
Confidence             7788876653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.99  E-value=3.2e-09  Score=65.29  Aligned_cols=83  Identities=25%  Similarity=0.226  Sum_probs=68.3

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      ||.|+||.+|.+... .+..+++|.+..... .......+..|+.++..+.|+|++++++.+... ..++++||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999864 477899998875432 122455678888999999999999999988888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        81 ~~~l~~   86 (250)
T cd05123          81 FSHLSK   86 (250)
T ss_pred             HHHHHh
Confidence            887754

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.99  E-value=6.4e-09  Score=62.81  Aligned_cols=86  Identities=33%  Similarity=0.387  Sum_probs=72.0

Q ss_pred             hcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.+.||.|+++.+|++.... +..+++|.+..... ......+.+|+..+..+.|+|++++.+.+... ..++++|++.+
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT-EKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc-hHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            46779999999999998754 77899999886542 12556788899999999999999999998887 89999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++..
T Consensus        82 ~~L~~~~~~   90 (225)
T smart00221       82 GDLFDYLRK   90 (225)
T ss_pred             CCHHHHHHh
Confidence            999888754

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.99  E-value=3.7e-09  Score=66.51  Aligned_cols=88  Identities=23%  Similarity=0.192  Sum_probs=69.0

Q ss_pred             HhcCccccCCCceEEEEEeC----CCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.||+|++|.||++...    .+..+++|.+.....  .......+.+|+.++..+ +|++++.+.+..... ..++
T Consensus         3 ~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~l   82 (288)
T cd05583           3 ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL   82 (288)
T ss_pred             eEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEE
Confidence            45678999999999998742    367899998875321  122345577889999998 699999999888877 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+.+|+|..++..
T Consensus        83 v~e~~~~~~L~~~~~~   98 (288)
T cd05583          83 ILDYVNGGELFTHLYQ   98 (288)
T ss_pred             EEecCCCCcHHHHHhh
Confidence            9999999999887653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.98  E-value=5.4e-09  Score=67.59  Aligned_cols=88  Identities=19%  Similarity=0.135  Sum_probs=67.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~   94 (113)
                      +...+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++.+.+...       ..+
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07880          17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFY   96 (343)
T ss_pred             eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEE
Confidence            445678999999999999854 578899998864322133445678899999999999999999887653       358


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+ +++|..++..
T Consensus        97 lv~e~~-~~~l~~~~~~  112 (343)
T cd07880          97 LVMPFM-GTDLGKLMKH  112 (343)
T ss_pred             EEEecC-CCCHHHHHhc
Confidence            999998 6678776643

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.98  E-value=5.4e-09  Score=67.24  Aligned_cols=87  Identities=21%  Similarity=0.126  Sum_probs=67.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e~   99 (113)
                      +.+.+.||.|+||.||++... .+..+++|.+............+.+|+.++..+.|+|++++.+.+...  ..++++||
T Consensus        12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~   91 (328)
T cd07856          12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL   91 (328)
T ss_pred             eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence            445688999999999999864 578899998764322123445677899999999999999999988664  78899999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +. ++|..++.
T Consensus        92 ~~-~~L~~~~~  101 (328)
T cd07856          92 LG-TDLHRLLT  101 (328)
T ss_pred             hc-cCHHHHHh
Confidence            84 57776664

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.97  E-value=1.3e-08  Score=64.03  Aligned_cols=84  Identities=19%  Similarity=0.195  Sum_probs=60.5

Q ss_pred             ccccCCCceEEEEEeC-CCcEEEEEEeeccchhHH-HHHHHHHHHH---HHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           28 TPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQ-AAFQFISEDE---ILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~-~~~~~~~e~~---~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .||+|+||.||.+... .+..+++|.+........ ......++..   ++....|++++.+.+.+... ..++++||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4799999999999864 478899998865431111 1122233332   33344789999999888887 8999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|..++..
T Consensus        81 ~~~L~~~i~~   90 (279)
T cd05633          81 GGDLHYHLSQ   90 (279)
T ss_pred             CCCHHHHHHh
Confidence            9999877653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.97  E-value=3.4e-09  Score=67.39  Aligned_cols=89  Identities=20%  Similarity=0.217  Sum_probs=67.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv   96 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++.+.+...   ..+++
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence            34556788999999999999874 478899998875432122223456789999999999999999988654   58999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+ +|.+++.
T Consensus        87 ~e~~~~-~l~~~l~   99 (309)
T cd07845          87 MEYCEQ-DLASLLD   99 (309)
T ss_pred             EecCCC-CHHHHHH
Confidence            999974 6766654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.97  E-value=6.3e-09  Score=66.36  Aligned_cols=79  Identities=23%  Similarity=0.312  Sum_probs=61.4

Q ss_pred             cCccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEEec
Q 044522           26 GKTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVYGY   99 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~e~   99 (113)
                      +.+||+|+||.||++...   .+..+++|.+.....    .....+|+.++..++|+|++++.+.+...   ..++++||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            567999999999999853   356799998865431    23456899999999999999999988653   68899999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +.+ +|..++
T Consensus        82 ~~~-~l~~~~   90 (317)
T cd07868          82 AEH-DLWHII   90 (317)
T ss_pred             cCC-CHHHHH
Confidence            864 666554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.96  E-value=7.5e-09  Score=65.45  Aligned_cols=89  Identities=25%  Similarity=0.282  Sum_probs=67.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--------   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--------   91 (113)
                      ..+.+.+.+|+|.||.||++... .+..+++|.++...........+.+|+.+++.++|+|++++.+++.+.        
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~   86 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK   86 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence            34566788999999999999975 477899999875432122334567788999999999999999887542        


Q ss_pred             ---eEEEEEecCCCCChhhhcc
Q 044522           92 ---VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ---~~~lv~e~~~~g~L~~~l~  110 (113)
                         ..++++||+++ ++...+.
T Consensus        87 ~~~~~~lv~e~~~~-~l~~~l~  107 (302)
T cd07864          87 DKGAFYLVFEYMDH-DLMGLLE  107 (302)
T ss_pred             cCCcEEEEEcccCc-cHHHHHh
Confidence               58899999986 5555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.96  E-value=5.3e-09  Score=66.27  Aligned_cols=89  Identities=22%  Similarity=0.285  Sum_probs=66.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--------   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--------   91 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..+.|+|++++.+++...        
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            34566788999999999999864 477899998865331122234456788999999999999999988654        


Q ss_pred             -eEEEEEecCCCCChhhhcc
Q 044522           92 -VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~  110 (113)
                       ..++++||+.+ ++..++.
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~  110 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLS  110 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHH
Confidence             34899999874 6666554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.96  E-value=3.3e-09  Score=66.89  Aligned_cols=87  Identities=20%  Similarity=0.184  Sum_probs=66.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-e-----EE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-V-----WL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~-----~~   94 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..+. |+|++++++.+... .     .+
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~   82 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY   82 (295)
T ss_pred             ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence            345678999999999999864 5788999987654311223356778899999884 69999999888765 4     89


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+ ++..++.
T Consensus        83 lv~e~~~~-~l~~~~~   97 (295)
T cd07837          83 LVFEYLDS-DLKKFMD   97 (295)
T ss_pred             EEeeccCc-CHHHHHH
Confidence            99999985 7777654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.95  E-value=1.1e-08  Score=64.56  Aligned_cols=85  Identities=26%  Similarity=0.303  Sum_probs=66.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec------eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI------VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~------~~~   94 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+....   .....+.+|+..+..+ +|+|++++++.+...      ..+
T Consensus        24 y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~  100 (291)
T cd06639          24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW  100 (291)
T ss_pred             eEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence            455678999999999999864 57789999886532   2234456777778877 799999999988642      488


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+++++|.+++.
T Consensus       101 lv~ey~~~~sL~~~~~  116 (291)
T cd06639         101 LVLELCNGGSVTELVK  116 (291)
T ss_pred             EEEEECCCCcHHHHHH
Confidence            9999999999987764

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.95  E-value=4.3e-09  Score=70.68  Aligned_cols=79  Identities=19%  Similarity=0.125  Sum_probs=63.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+...||+|+||.||++... .+..+++|....        ..+.+|+.+++.++|+|++++++++... ..++++|++
T Consensus       171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             eEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            445677999999999999875 467889985332        1345789999999999999999999888 899999998


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      . ++|..++.
T Consensus       243 ~-~~L~~~l~  251 (461)
T PHA03211        243 R-SDLYTYLG  251 (461)
T ss_pred             C-CCHHHHHH
Confidence            5 67777664

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.95  E-value=1.5e-09  Score=67.27  Aligned_cols=88  Identities=22%  Similarity=0.207  Sum_probs=64.9

Q ss_pred             hHhcCccccCCCceEEEEEeCC-CcEEEEEEeec---cchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKV---MSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~---~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +.+.+.||+|+||.||++.... +....++.+..   .............|+.+++.++|+|++++++.+.+. ..++++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            4567889999999999987542 33344444332   111123344566788889999999999999998888 899999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+++++|..++.
T Consensus        82 e~~~~~~l~~~~~   94 (260)
T cd08222          82 EYCEGRDLDCKLE   94 (260)
T ss_pred             EeCCCCCHHHHHH
Confidence            9999999987764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.94  E-value=6.7e-09  Score=67.59  Aligned_cols=88  Identities=16%  Similarity=0.052  Sum_probs=67.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~   92 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++++++...       .
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~  103 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  103 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence            45567788999999999999864 477899998875432234456678899999999999999998877532       4


Q ss_pred             EEEEEecCCCCChhhhc
Q 044522           93 WLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l  109 (113)
                      .++++||+.+ ++..++
T Consensus       104 ~~lv~e~~~~-~l~~~~  119 (364)
T cd07875         104 VYIVMELMDA-NLCQVI  119 (364)
T ss_pred             EEEEEeCCCC-CHHHHH
Confidence            7999999975 555544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.94  E-value=7.4e-09  Score=66.82  Aligned_cols=88  Identities=18%  Similarity=0.075  Sum_probs=66.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~   93 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++...       ..
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   95 (343)
T cd07878          16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEV   95 (343)
T ss_pred             hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcE
Confidence            4556788999999999999864 577899998875432223445677899999999999999998876431       46


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      +++++++ +++|..++.
T Consensus        96 ~~~~~~~-~~~l~~~~~  111 (343)
T cd07878          96 YLVTNLM-GADLNNIVK  111 (343)
T ss_pred             EEEeecC-CCCHHHHHh
Confidence            7888877 677877654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.94  E-value=2.9e-08  Score=63.24  Aligned_cols=86  Identities=24%  Similarity=0.240  Sum_probs=67.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +...+.||+|+||.||.+... .+..+++|.+.... ........+.+|+.+++.++|+|++++.+++... ..++++||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            344567999999999999864 46779999876432 1134455678899999999999999999999888 89999999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +. |++..++
T Consensus        97 ~~-~~l~~~~  105 (308)
T cd06634          97 CL-GSASDLL  105 (308)
T ss_pred             cC-CCHHHHH
Confidence            97 5666554

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.93  E-value=6e-09  Score=66.29  Aligned_cols=89  Identities=20%  Similarity=0.223  Sum_probs=69.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCc-cceeeeEEEec-------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRS-LVVLVGYCIEI-------   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~-i~~l~~~~~~~-------   91 (113)
                      ..+..-+++|+|+||.||+|... .|..||+|.++.............+|+.++..+.|+| ++++.+++.+.       
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            34445566999999999999964 5789999999876421224456789999999999999 99999998764       


Q ss_pred             eEEEEEecCCCCChhhhcc
Q 044522           92 VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~  110 (113)
                      ..++++||+.. +|..++.
T Consensus        91 ~l~lvfe~~d~-DL~~ymd  108 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMD  108 (323)
T ss_pred             eEEEEEEeecc-cHHHHHH
Confidence            47799999864 6766654

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=8.2e-10  Score=70.49  Aligned_cols=91  Identities=21%  Similarity=0.201  Sum_probs=73.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ...+.++||+|.||+|..+.-+ .+..+|+|+++..-. .......-.-|-.++....||.+..|...+... .+++|||
T Consensus       169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMe  248 (516)
T KOG0690|consen  169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVME  248 (516)
T ss_pred             hhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEE
Confidence            3456788999999999998864 578899999876421 234455556677889999999999998888777 9999999


Q ss_pred             cCCCCChhhhccCC
Q 044522           99 YPCNGSLDHNLCGP  112 (113)
Q Consensus        99 ~~~~g~L~~~l~~~  112 (113)
                      |..||+|+.++.+.
T Consensus       249 yanGGeLf~HLsre  262 (516)
T KOG0690|consen  249 YANGGELFFHLSRE  262 (516)
T ss_pred             EccCceEeeehhhh
Confidence            99999999887654

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.92  E-value=1.1e-08  Score=64.05  Aligned_cols=86  Identities=22%  Similarity=0.259  Sum_probs=68.4

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEEecC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVYGYP  100 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~e~~  100 (113)
                      +.+.||.|++|.||++... .+..+++|.+............+.+|+.++..+.|+|++++.+.+...   ..++++||+
T Consensus         3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07840           3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM   82 (287)
T ss_pred             eeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence            4567999999999999875 477899999886532133445677899999999999999999988754   799999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++ +|..++.+
T Consensus        83 ~~-~l~~~~~~   92 (287)
T cd07840          83 DH-DLTGLLDS   92 (287)
T ss_pred             cc-cHHHHHhc
Confidence            75 77777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.92  E-value=2.7e-08  Score=62.51  Aligned_cols=84  Identities=20%  Similarity=0.206  Sum_probs=60.6

Q ss_pred             ccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHH---HHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           28 TPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISED---EILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~---~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .||+|+||.||.+... .+..+++|.+...... ......+..+.   ..+....|++++.+.+.+... ..++++||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4799999999998864 4788999988754211 11111222332   234445799999999988888 8999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|..++.+
T Consensus        81 g~~L~~~l~~   90 (278)
T cd05606          81 GGDLHYHLSQ   90 (278)
T ss_pred             CCcHHHHHHh
Confidence            9999887653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.91  E-value=1.3e-09  Score=72.20  Aligned_cols=90  Identities=27%  Similarity=0.208  Sum_probs=70.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-----hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-----CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~   93 (113)
                      .|-+...||+|+|+.||+++.- ..+.+|+|+-.....     .....+...+|..+...++|+.+|++++++.-.  .+
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            4456788999999999999853 467788887544221     112345567889999999999999999988755  78


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      +.|.||++|.+|+.++..
T Consensus       544 CTVLEYceGNDLDFYLKQ  561 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQ  561 (775)
T ss_pred             eeeeeecCCCchhHHHHh
Confidence            899999999999998764

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.91  E-value=8.2e-09  Score=66.92  Aligned_cols=88  Identities=17%  Similarity=0.069  Sum_probs=67.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~   92 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++++.+...       .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   96 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD   96 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence            44556788999999999999864 477899998875432234556678899999999999999999887542       4


Q ss_pred             EEEEEecCCCCChhhhc
Q 044522           93 WLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l  109 (113)
                      .++++||+.+ ++...+
T Consensus        97 ~~lv~e~~~~-~l~~~~  112 (355)
T cd07874          97 VYLVMELMDA-NLCQVI  112 (355)
T ss_pred             eEEEhhhhcc-cHHHHH
Confidence            6899999975 454443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PRK10345 hypothetical protein; Provisional

Probab=98.91  E-value=1.6e-08  Score=61.51  Aligned_cols=82  Identities=7%  Similarity=-0.055  Sum_probs=60.8

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-----CCCccceeeeEEEec----eEE-E
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-----QHRSLVVLVGYCIEI----VWL-L   95 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-----~h~~i~~l~~~~~~~----~~~-l   95 (113)
                      .+.||+|+|+.||.  .+.....++|......  ......+.+|+..+..+     .|+|+++++++....    .++ +
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCeEEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            46799999999996  3332334688876543  23445688999999988     579999999999875    233 6


Q ss_pred             EEec--CCCCChhhhccC
Q 044522           96 VYGY--PCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~--~~~g~L~~~l~~  111 (113)
                      ++||  ..+|+|.+++.+
T Consensus        83 I~e~~G~~~~tL~~~l~~  100 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQ  100 (210)
T ss_pred             EecCCCCcchhHHHHHHc
Confidence            8999  557899988754

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.91  E-value=8.3e-10  Score=70.56  Aligned_cols=80  Identities=24%  Similarity=0.228  Sum_probs=61.1

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLLV   96 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~lv   96 (113)
                      .-.+.+|+|+||.||+|... .+..+|||....+..      --.+|..+|+.++|||++++..++...      ...+|
T Consensus        27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            34678999999999999965 468899998876541      123678888999999999998777543      34579


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||++. +|...++
T Consensus       101 leymP~-tL~~~~r  113 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIR  113 (364)
T ss_pred             HHhchH-HHHHHHH
Confidence            999985 5766655

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.91  E-value=1.4e-08  Score=64.74  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=60.9

Q ss_pred             cCccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--c-eEEEEEec
Q 044522           26 GKTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--I-VWLLVYGY   99 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--~-~~~lv~e~   99 (113)
                      +..||+|+||.||++...   .+..+++|.+....    ....+.+|+.++..++|+|++++.+++..  . ..++++||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            467999999999999853   24678999876532    12346688999999999999999998854  3 78899999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +.+ +|..++
T Consensus        82 ~~~-~l~~~~   90 (317)
T cd07867          82 AEH-DLWHII   90 (317)
T ss_pred             eCC-cHHHHH
Confidence            875 565544

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.90  E-value=4.4e-09  Score=67.66  Aligned_cols=89  Identities=17%  Similarity=0.143  Sum_probs=68.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~l   95 (113)
                      .+.+.+.||.|++|.||++... .+..+++|.+............+.+|+.++..+.|+|++++.+++..    . ..++
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l   85 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV   85 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence            3445678999999999999864 47889999887543212345567789999999999999998887642    3 6899


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+. ++|..++..
T Consensus        86 v~e~~~-~~l~~~~~~  100 (334)
T cd07855          86 VMDLME-SDLHHIIHS  100 (334)
T ss_pred             EEehhh-hhHHHHhcc
Confidence            999996 578777653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.90  E-value=2.5e-09  Score=77.07  Aligned_cols=64  Identities=23%  Similarity=0.334  Sum_probs=54.3

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI   91 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~   91 (113)
                      +.||+|+||.||+...+ +|..+|||.++... .........+|+.++.+++|||+|+++..|...
T Consensus       485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVES  549 (1351)
T ss_pred             HHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence            56999999999999875 69999999998764 245667788999999999999999998777543

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.90  E-value=6.7e-09  Score=69.37  Aligned_cols=81  Identities=20%  Similarity=0.226  Sum_probs=60.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--------c-
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--------I-   91 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--------~-   91 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+....      ....+|+.++..++|+|++++.+++..        . 
T Consensus        67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            3556788999999999999864 47889999876432      122368889999999999999876532        2 


Q ss_pred             eEEEEEecCCCCChhhhc
Q 044522           92 VWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l  109 (113)
                      ..++++||+++ ++..++
T Consensus       141 ~l~lvmE~~~~-~l~~~~  157 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYM  157 (440)
T ss_pred             EEEEEEecCCc-cHHHHH
Confidence            46789999985 555443

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.89  E-value=3.7e-09  Score=66.12  Aligned_cols=86  Identities=22%  Similarity=0.245  Sum_probs=69.8

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.+.||+|.+|.+|.+... .+..+++|.+............+..|+.+++.+.|+|++++.+.+... ..++++||+. 
T Consensus         3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-   81 (282)
T cd07829           3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-   81 (282)
T ss_pred             eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence            3567999999999999865 478899999876432133445677889999999999999999999888 9999999998 


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++.+
T Consensus        82 ~~l~~~i~~   90 (282)
T cd07829          82 MDLKKYLDK   90 (282)
T ss_pred             cCHHHHHHh
Confidence            488887754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.88  E-value=8.8e-09  Score=64.75  Aligned_cols=86  Identities=23%  Similarity=0.274  Sum_probs=60.5

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHh---hCCCCccceeeeEEEe-----c-eE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILS---CAQHRSLVVLVGYCIE-----I-VW   93 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~---~~~h~~i~~l~~~~~~-----~-~~   93 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..............+|+..+.   .++|+|++++++++..     . ..
T Consensus         3 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~   82 (288)
T cd07863           3 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKV   82 (288)
T ss_pred             eEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceE
Confidence            45677999999999999865 4788999988753211111223445555544   4479999999988754     2 58


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++|++.+ +|..++.
T Consensus        83 ~lv~e~~~~-~l~~~~~   98 (288)
T cd07863          83 TLVFEHVDQ-DLRTYLD   98 (288)
T ss_pred             EEEEccccc-CHHHHHH
Confidence            899999984 7777654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=1.5e-09  Score=73.90  Aligned_cols=76  Identities=24%  Similarity=0.298  Sum_probs=63.0

Q ss_pred             CccccCCCceEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           27 KTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ..||+|+||.||.+.. +....||||...-.. .....+.....|+..+..+.|||.+.+.|++... ..++|||||-|
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG  110 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG  110 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc
Confidence            4599999999999985 456789999887544 1233455678999999999999999999999999 89999999975

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=5.9e-09  Score=66.66  Aligned_cols=86  Identities=19%  Similarity=0.176  Sum_probs=69.4

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe-----c-eEEEEEe
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-----I-VWLLVYG   98 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~-----~-~~~lv~e   98 (113)
                      .+.||+|++|.|+.+... .+..||+|.+.......-..+...+|+.+++.++|+|++.+..+...     . .+|+|+|
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e  106 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE  106 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence            577999999999998864 58899999987443324567778899999999999999999888765     2 7999999


Q ss_pred             cCCCCChhhhccCC
Q 044522           99 YPCNGSLDHNLCGP  112 (113)
Q Consensus        99 ~~~~g~L~~~l~~~  112 (113)
                      +|. .+|...|+..
T Consensus       107 lMe-tDL~~iik~~  119 (359)
T KOG0660|consen  107 LME-TDLHQIIKSQ  119 (359)
T ss_pred             HHh-hHHHHHHHcC
Confidence            994 4777766543

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.87  E-value=1e-08  Score=66.07  Aligned_cols=88  Identities=17%  Similarity=0.123  Sum_probs=67.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~l   95 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++.+++...      ..++
T Consensus         7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l   86 (337)
T cd07858           7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYI   86 (337)
T ss_pred             eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEE
Confidence            445678999999999999864 578899998875322133445677899999999999999998877543      4799


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+. ++|..++.+
T Consensus        87 v~e~~~-~~L~~~~~~  101 (337)
T cd07858          87 VYELMD-TDLHQIIRS  101 (337)
T ss_pred             EEeCCC-CCHHHHHhc
Confidence            999996 577776643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.87  E-value=2.3e-08  Score=62.58  Aligned_cols=85  Identities=20%  Similarity=0.176  Sum_probs=63.0

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec---eEEEEEec
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI---VWLLVYGY   99 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~---~~~lv~e~   99 (113)
                      +.+.+|+|.||.||++... .+..+++|.+..... ........+|+..+..+ .|+|++++++.+.+.   ..++++||
T Consensus         3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             eEeeccccccceEEEEEEcCCCcEEEEEEehhccC-CchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            4567999999999999864 577899998765321 11222344677777777 499999999988764   78999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +. |++.+++.+
T Consensus        82 ~~-~~l~~~l~~   92 (282)
T cd07831          82 MD-MNLYELIKG   92 (282)
T ss_pred             CC-ccHHHHHHh
Confidence            97 477766653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.87  E-value=1.1e-08  Score=66.62  Aligned_cols=79  Identities=19%  Similarity=0.127  Sum_probs=63.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|......        ...|+.++..++|+|++++++++... ..++++|++
T Consensus        68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            456688999999999999875 46678888754321        23578889999999999999999988 899999998


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      . ++|..++.
T Consensus       140 ~-~~l~~~l~  148 (357)
T PHA03209        140 S-SDLYTYLT  148 (357)
T ss_pred             C-CcHHHHHH
Confidence            5 57777664

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.86  E-value=1.8e-08  Score=64.10  Aligned_cols=85  Identities=25%  Similarity=0.318  Sum_probs=65.0

Q ss_pred             HhcCccccCCCceEEEEEeC---CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLV   96 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv   96 (113)
                      .+.+.||+|++|.||++...   .+..+++|.+..... .......+.+|+.++..++|+|++++.+.+...   ..+++
T Consensus         3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   82 (316)
T cd07842           3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL   82 (316)
T ss_pred             eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence            45677999999999999864   367899999876320 012334567888899999999999999998765   68999


Q ss_pred             EecCCCCChhhhc
Q 044522           97 YGYPCNGSLDHNL  109 (113)
Q Consensus        97 ~e~~~~g~L~~~l  109 (113)
                      +||+.+ ++..++
T Consensus        83 ~e~~~~-~l~~~~   94 (316)
T cd07842          83 FDYAEH-DLWQII   94 (316)
T ss_pred             EeCCCc-CHHHHH
Confidence            999875 555543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.85  E-value=9.1e-09  Score=69.84  Aligned_cols=86  Identities=23%  Similarity=0.203  Sum_probs=68.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-C-----CccceeeeEEEec-eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-H-----RSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h-----~~i~~l~~~~~~~-~~~   94 (113)
                      |.+.+.||+|+||+|.+|... .+..||||.++-.   .....+-..|+.++..++ |     -|+|+++++..-. +.+
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            345789999999999999865 4889999999864   355566677888887775 3     3789999888777 999


Q ss_pred             EEEecCCCCChhhhccCC
Q 044522           95 LVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~~  112 (113)
                      ||+|.+.. +|.++|+..
T Consensus       265 iVfELL~~-NLYellK~n  281 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNN  281 (586)
T ss_pred             eeehhhhh-hHHHHHHhc
Confidence            99998864 899988754

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.85  E-value=3.1e-08  Score=64.22  Aligned_cols=87  Identities=18%  Similarity=0.066  Sum_probs=66.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~   93 (113)
                      .+...+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++++++...       ..
T Consensus        17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   96 (353)
T cd07850          17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDV   96 (353)
T ss_pred             ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcE
Confidence            3455688999999999999864 578899998864322234456677899999999999999999887532       46


Q ss_pred             EEEEecCCCCChhhhc
Q 044522           94 LLVYGYPCNGSLDHNL  109 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l  109 (113)
                      ++++||+.+ +|...+
T Consensus        97 ~lv~e~~~~-~l~~~~  111 (353)
T cd07850          97 YLVMELMDA-NLCQVI  111 (353)
T ss_pred             EEEEeccCC-CHHHHH
Confidence            899999974 666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.84  E-value=3.1e-08  Score=64.16  Aligned_cols=87  Identities=18%  Similarity=0.093  Sum_probs=65.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~   94 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++.+.+...       ..+
T Consensus        19 y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   98 (345)
T cd07877          19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY   98 (345)
T ss_pred             eEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEE
Confidence            345678999999999999853 577899998875432133455677899999999999999999887542       366


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      ++++++ +++|..++.
T Consensus        99 lv~~~~-~~~L~~~~~  113 (345)
T cd07877          99 LVTHLM-GADLNNIVK  113 (345)
T ss_pred             EEehhc-ccCHHHHHh
Confidence            777765 678876654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.84  E-value=2.1e-08  Score=65.96  Aligned_cols=81  Identities=17%  Similarity=0.027  Sum_probs=64.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      .+.+.+.||+|+||.||.+...   .+..+++|.+....       ...+|+.++..++|+|++++++.+... ..++++
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            4567788999999999998743   24568888776432       234788999999999999999999888 899999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      |++. ++|..++.
T Consensus       166 e~~~-~~l~~~l~  177 (392)
T PHA03207        166 PKYK-CDLFTYVD  177 (392)
T ss_pred             hhcC-CCHHHHHH
Confidence            9986 57777663

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.83  E-value=1.6e-08  Score=63.25  Aligned_cols=86  Identities=20%  Similarity=0.233  Sum_probs=68.7

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      +.+.||.|++|.+|++... .+..+++|.+............+..|+..+..++|++++++.+.+..+ ..++++||+.+
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT   82 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence            4567999999999999864 577899998876542223445677888999999999999999999888 99999999975


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                       ++...+..
T Consensus        83 -~l~~~l~~   90 (283)
T cd05118          83 -DLYKLIKD   90 (283)
T ss_pred             -CHHHHHHh
Confidence             77766543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.83  E-value=3.2e-08  Score=62.01  Aligned_cols=85  Identities=24%  Similarity=0.278  Sum_probs=63.1

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC---CCCccceeeeEEEec-e-----EE
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA---QHRSLVVLVGYCIEI-V-----WL   94 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~---~h~~i~~l~~~~~~~-~-----~~   94 (113)
                      +.+.||+|.||.||++... .+..+++|.+............+.+|+.++..+   .|+|++++.+.+... .     .+
T Consensus         3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~   82 (287)
T cd07838           3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT   82 (287)
T ss_pred             EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence            4577999999999999975 478899999875432122233455666655444   699999999999876 6     99


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+ +|.+++.
T Consensus        83 l~~e~~~~-~l~~~l~   97 (287)
T cd07838          83 LVFEHVDQ-DLATYLS   97 (287)
T ss_pred             EEehhccc-CHHHHHH
Confidence            99999974 6776654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.82  E-value=2.3e-08  Score=64.40  Aligned_cols=87  Identities=15%  Similarity=0.095  Sum_probs=66.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~   94 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.++..++|+|++++++++...      ..+
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            3456788999999999999864 578899998864321 23445677899999999999999998876543      478


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+ ++...+.
T Consensus        85 lv~e~~~~-~l~~~~~   99 (336)
T cd07849          85 IVQELMET-DLYKLIK   99 (336)
T ss_pred             EEehhccc-CHHHHHh
Confidence            99999874 6766554

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.82  E-value=8.9e-09  Score=69.39  Aligned_cols=94  Identities=21%  Similarity=0.164  Sum_probs=77.7

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ++-..|.+.+.||+|+-+.||+....+...+++|.+.....+.+....|.+|+.++..+ .|.++++|+++-..+ .+|+
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            46677888999999999999999877677788887766554467788899999999999 589999999999888 9999


Q ss_pred             EEecCCCCChhhhccCC
Q 044522           96 VYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~~  112 (113)
                      |||+= ..+|..+|++.
T Consensus       438 vmE~G-d~DL~kiL~k~  453 (677)
T KOG0596|consen  438 VMECG-DIDLNKILKKK  453 (677)
T ss_pred             Eeecc-cccHHHHHHhc
Confidence            99954 45777777643

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.80  E-value=4.9e-10  Score=81.07  Aligned_cols=85  Identities=26%  Similarity=0.291  Sum_probs=71.3

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +..||.|.||.||.++.. .|...|+|.+..............+|..++-.+.|||+|+++|+-... ..+|.||||.+|
T Consensus      1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence            577999999999999854 577889998876543234455678899999999999999999999887 899999999999


Q ss_pred             Chhhhcc
Q 044522          104 SLDHNLC  110 (113)
Q Consensus       104 ~L~~~l~  110 (113)
                      +|.+++.
T Consensus      1320 sLa~ll~ 1326 (1509)
T KOG4645|consen 1320 SLASLLE 1326 (1509)
T ss_pred             cHHHHHH
Confidence            9998765

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.80  E-value=1.1e-07  Score=59.88  Aligned_cols=78  Identities=15%  Similarity=0.138  Sum_probs=62.1

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      ...+.||+|+||.||++... .+..+++|.+..... ......+.+|+..+..+. |+|++++++.+..+ ..++++||+
T Consensus         7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~   85 (288)
T cd06616           7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD-EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM   85 (288)
T ss_pred             HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC-hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence            34567999999999999864 478899998875432 234456778888888885 99999999999888 889999997


Q ss_pred             CC
Q 044522          101 CN  102 (113)
Q Consensus       101 ~~  102 (113)
                      ..
T Consensus        86 ~~   87 (288)
T cd06616          86 DI   87 (288)
T ss_pred             cC
Confidence            64

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.80  E-value=3.7e-08  Score=69.30  Aligned_cols=86  Identities=22%  Similarity=0.283  Sum_probs=66.0

Q ss_pred             HhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe-----c-eEEE
Q 044522           24 TLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE-----I-VWLL   95 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~-----~-~~~l   95 (113)
                      .+.+++|.|.+|.||++.. +.+...++|+.....   ....+.-.|..+++.. .|+|++.++|++..     + .+++
T Consensus        22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL   98 (953)
T KOG0587|consen   22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL   98 (953)
T ss_pred             EEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence            4578899999999999985 457778888887654   2223344455566655 79999999998853     2 7999


Q ss_pred             EEecCCCCChhhhccCC
Q 044522           96 VYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~~  112 (113)
                      |||||.+|++-+++.+.
T Consensus        99 VMEfC~gGSVTDLVKn~  115 (953)
T KOG0587|consen   99 VMEFCGGGSVTDLVKNT  115 (953)
T ss_pred             EeeccCCccHHHHHhhh
Confidence            99999999999987653

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.80  E-value=2.5e-08  Score=64.48  Aligned_cols=85  Identities=19%  Similarity=0.091  Sum_probs=66.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec----------
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI----------   91 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~----------   91 (113)
                      +.+.+.||.|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+|++++++.+...          
T Consensus         7 y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           7 YMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             eEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            445678999999999999864 47789999887654  34556688899999999999999988655432          


Q ss_pred             -----eEEEEEecCCCCChhhhcc
Q 044522           92 -----VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 -----~~~lv~e~~~~g~L~~~l~  110 (113)
                           ..++++||+. ++|..++.
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~  107 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLE  107 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHH
Confidence                 4789999997 47776653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.79  E-value=8.1e-10  Score=75.84  Aligned_cols=81  Identities=22%  Similarity=0.288  Sum_probs=67.0

Q ss_pred             CccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCC
Q 044522           27 KTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS  104 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~  104 (113)
                      ..||.|.||.||++..+. +...|.|.+....  ......+.-|+.++...+||+++.|++.+.-. .++++.|||.||.
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGA  115 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGA  115 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCch
Confidence            448999999999998654 4456777776544  46677789999999999999999999888777 8999999999998


Q ss_pred             hhhhc
Q 044522          105 LDHNL  109 (113)
Q Consensus       105 L~~~l  109 (113)
                      ++..+
T Consensus       116 VDaim  120 (1187)
T KOG0579|consen  116 VDAIM  120 (1187)
T ss_pred             HhHHH
Confidence            87654

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.78  E-value=2e-08  Score=64.34  Aligned_cols=88  Identities=18%  Similarity=0.156  Sum_probs=69.0

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~l   95 (113)
                      +.+.+.||.|++|.||++... .+..+++|.+..........+.+.+|+..+..++|+|++++.+++...      ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            345678999999999999865 478899998876432234456788899999999999999999887543      5899


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++ +|..++.+
T Consensus        82 v~e~~~~-~l~~~l~~   96 (330)
T cd07834          82 VTELMET-DLHKVIKS   96 (330)
T ss_pred             Eecchhh-hHHHHHhC
Confidence            9999984 77776654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.77  E-value=2.1e-08  Score=63.58  Aligned_cols=89  Identities=25%  Similarity=0.271  Sum_probs=66.3

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------   91 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------   91 (113)
                      +..+.+.+.||.|++|.||.+... .+..+++|.+............+.+|+.++..++|+|++++.+.+...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            456667888999999999999864 477899998865432122234566888999999999999998876443       


Q ss_pred             --eEEEEEecCCCCChhhhc
Q 044522           92 --VWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        92 --~~~lv~e~~~~g~L~~~l  109 (113)
                        ..++++||+.+ ++...+
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~  105 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLL  105 (311)
T ss_pred             CceEEEEEecCCc-CHHHHH
Confidence              46899999875 455544

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.77  E-value=2.1e-08  Score=64.80  Aligned_cols=88  Identities=18%  Similarity=0.110  Sum_probs=67.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e------EE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V------WL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~------~~   94 (113)
                      +.+...||+|.+|.+|.+... .+..+++|.+............+.+|+.+++.+.|+|++++.+..... .      .+
T Consensus        17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07851          17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY   96 (343)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence            345678999999999999874 477899998765322233445677899999999999999988766544 3      89


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+ +++|.+++..
T Consensus        97 lv~e~~-~~~L~~~~~~  112 (343)
T cd07851          97 LVTHLM-GADLNNIVKC  112 (343)
T ss_pred             EEEecC-CCCHHHHHhc
Confidence            999998 4688777643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.76  E-value=1.2e-07  Score=59.35  Aligned_cols=76  Identities=18%  Similarity=0.136  Sum_probs=57.1

Q ss_pred             cccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhh-CCCCccceeeeEEEec-eEEEEEecCCCCCh
Q 044522           29 PRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSC-AQHRSLVVLVGYCIEI-VWLLVYGYPCNGSL  105 (113)
Q Consensus        29 lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~-~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L  105 (113)
                      +|+|+||.||.+... .+..+++|.+.....  ...     |...... .+|+|++++++.+... ..++++||+++++|
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L   96 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF--NAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDL   96 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhc--chh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcH
Confidence            599999999999864 477889998765321  111     1111111 2699999999999888 99999999999999


Q ss_pred             hhhccC
Q 044522          106 DHNLCG  111 (113)
Q Consensus       106 ~~~l~~  111 (113)
                      .+++.+
T Consensus        97 ~~~l~~  102 (267)
T PHA03390         97 FDLLKK  102 (267)
T ss_pred             HHHHHh
Confidence            988765

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.76  E-value=2.5e-07  Score=54.91  Aligned_cols=82  Identities=32%  Similarity=0.366  Sum_probs=68.4

Q ss_pred             cccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCChh
Q 044522           29 PRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSLD  106 (113)
Q Consensus        29 lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~  106 (113)
                      ||+|.++.+|++.... +..+++|.+..... ......+.+|+..+..+.|++++++.+..... ..++++|++.+++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS-SSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence            6889999999998753 78899999886542 11345688899999999999999999999887 899999999999999


Q ss_pred             hhccC
Q 044522          107 HNLCG  111 (113)
Q Consensus       107 ~~l~~  111 (113)
                      .++..
T Consensus        80 ~~~~~   84 (215)
T cd00180          80 DLLKE   84 (215)
T ss_pred             HHHHh
Confidence            88754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.75  E-value=3.9e-08  Score=66.74  Aligned_cols=89  Identities=17%  Similarity=0.240  Sum_probs=58.7

Q ss_pred             HHhHhcCccccCCCceEEEEEe-----------------CCCcEEEEEEeeccchhHHHHHH--------------HHHH
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-----------------RDGQVVAVKHHKVMSACAQAAFQ--------------FISE   69 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-----------------~~~~~~~ik~~~~~~~~~~~~~~--------------~~~e   69 (113)
                      ..+.+.++||+|+||.||+|..                 ..+..+++|.+....  ......              ...|
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~--~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDR--QGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccc--hhhHHHHHhhhhhhhcccchhHHH
Confidence            3455678899999999999863                 124579999986543  111122              2335


Q ss_pred             HHHHhhCCCCcc-----ceeeeEEEe--------c-eEEEEEecCCCCChhhhccC
Q 044522           70 DEILSCAQHRSL-----VVLVGYCIE--------I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        70 ~~~~~~~~h~~i-----~~l~~~~~~--------~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      +..+..+.|.++     +.+.+++..        . ..++|+||+.+++|.++++.
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence            555556655443     455555532        2 67899999999999988763

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.75  E-value=1.1e-07  Score=60.19  Aligned_cols=87  Identities=20%  Similarity=0.209  Sum_probs=65.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|++|.||++.... +..+++|.+..... ......+..++..+... .|+|++++++.+... ..++++
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            445677889999999999999754 78899999875432 22334455666655555 599999999999988 999999


Q ss_pred             ecCCCCChhhhc
Q 044522           98 GYPCNGSLDHNL  109 (113)
Q Consensus        98 e~~~~g~L~~~l  109 (113)
                      ||+.+ ++..++
T Consensus        94 e~~~~-~l~~l~  104 (296)
T cd06618          94 ELMST-CLDKLL  104 (296)
T ss_pred             eccCc-CHHHHH
Confidence            99854 555443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.73  E-value=2.8e-09  Score=65.52  Aligned_cols=89  Identities=19%  Similarity=0.114  Sum_probs=72.6

Q ss_pred             HHhHhcCccccCCCceEEEEE-eCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c--eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I--VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~--~~   93 (113)
                      ..+.+.+.+|+|+|+.|+.+. ...+..+|+|.+....  .+..+...+|++..+.++|+|++++......    .  ..
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            345577889999999999887 3457789999988765  5677788999999999999999988765532    2  69


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      |++++|...|+|.+.+.+
T Consensus        99 yll~Pyy~~Gsl~d~i~~  116 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIER  116 (302)
T ss_pred             EEEeehhccccHHHHHHH
Confidence            999999999999988764

>PTZ00284 protein kinase; Provisional

Probab=98.72  E-value=1e-07  Score=64.17  Aligned_cols=84  Identities=15%  Similarity=0.044  Sum_probs=57.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC------CCCccceeeeEEEec--eE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA------QHRSLVVLVGYCIEI--VW   93 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~------~h~~i~~l~~~~~~~--~~   93 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...   ........|+.++..+      .|.+++.+..++...  ..
T Consensus       131 y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        131 FKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             EEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            445678999999999999864 47789999986432   2222334444444444      345577887777665  78


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++|++ +++|.+++.
T Consensus       208 ~iv~~~~-g~~l~~~l~  223 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIM  223 (467)
T ss_pred             EEEEecc-CCCHHHHHH
Confidence            8888877 567777654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.72  E-value=4.6e-08  Score=58.61  Aligned_cols=81  Identities=14%  Similarity=0.019  Sum_probs=53.5

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHH------------------------HHHHHHHHHHHhhCCCCcc
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQA------------------------AFQFISEDEILSCAQHRSL   81 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~------------------------~~~~~~e~~~~~~~~h~~i   81 (113)
                      ...||+|+||.||.+....|..+++|.++........                        ......|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4679999999999998767889999998764210000                        0112347778888776665


Q ss_pred             ceeeeEEEeceEEEEEecCCCCChhh
Q 044522           82 VVLVGYCIEIVWLLVYGYPCNGSLDH  107 (113)
Q Consensus        82 ~~l~~~~~~~~~~lv~e~~~~g~L~~  107 (113)
                      ...... .....+++|||++++++..
T Consensus        82 ~~p~~~-~~~~~~iVmE~i~g~~l~~  106 (190)
T cd05147          82 PCPEPI-LLKSHVLVMEFIGDDGWAA  106 (190)
T ss_pred             CCCcEE-EecCCEEEEEEeCCCCCcc
Confidence            332222 2223479999999876654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.70  E-value=4.2e-08  Score=66.62  Aligned_cols=87  Identities=17%  Similarity=0.093  Sum_probs=58.6

Q ss_pred             HhHhcCccccCCCceEEEEEeCC--CcEEEEEEe--------------ec-cchhHHHHHHHHHHHHHHhhCCCCcccee
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD--GQVVAVKHH--------------KV-MSACAQAAFQFISEDEILSCAQHRSLVVL   84 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~--~~~~~ik~~--------------~~-~~~~~~~~~~~~~e~~~~~~~~h~~i~~l   84 (113)
                      .+.+.+.||+|+||.||.+..+.  +...+.+.+              .. ..........+.+|+.++..++|+|++++
T Consensus       149 ~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l  228 (501)
T PHA03210        149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKI  228 (501)
T ss_pred             ccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcE
Confidence            45567889999999999876431  111111100              00 00001234457789999999999999999


Q ss_pred             eeEEEec-eEEEEEecCCCCChhhhc
Q 044522           85 VGYCIEI-VWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        85 ~~~~~~~-~~~lv~e~~~~g~L~~~l  109 (113)
                      ++++... ..+++++++.+ ++..++
T Consensus       229 ~~~~~~~~~~~lv~e~~~~-~l~~~l  253 (501)
T PHA03210        229 EEILRSEANTYMITQKYDF-DLYSFM  253 (501)
T ss_pred             eEEEEECCeeEEEEecccc-CHHHHH
Confidence            9999988 88999998754 555544

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.65  E-value=2.1e-07  Score=56.59  Aligned_cols=78  Identities=27%  Similarity=0.273  Sum_probs=64.4

Q ss_pred             CCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCChhhhcc
Q 044522           33 GFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        33 ~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      +||.+|++... .+..+++|.+..... ......+.+|+..+..++|++++++.+.+... ..++++||+.+++|.+++.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKI-KKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEeccccc-ccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            47899999875 478899999876542 11156788999999999999999999999888 9999999999999988765


Q ss_pred             C
Q 044522          111 G  111 (113)
Q Consensus       111 ~  111 (113)
                      .
T Consensus        80 ~   80 (244)
T smart00220       80 K   80 (244)
T ss_pred             h
Confidence            3

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.63  E-value=4.1e-07  Score=55.00  Aligned_cols=83  Identities=19%  Similarity=0.202  Sum_probs=61.2

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchh-H-----HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC-A-----QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~-~-----~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.||+|.+|.||++.+ .+..+++|........ .     .....+.+|+..+..+.|+++.....++... ..++++||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999986 4567888875532210 0     1123467888888888888887766666666 78899999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++++|.+++.
T Consensus        81 ~~G~~L~~~~~   91 (211)
T PRK14879         81 IEGEPLKDLIN   91 (211)
T ss_pred             eCCcCHHHHHH
Confidence            99999987764

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.63  E-value=1.6e-07  Score=60.74  Aligned_cols=85  Identities=22%  Similarity=0.201  Sum_probs=63.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~   94 (113)
                      +...+.||+|+||.||++... .+..+++|.+............+.+|+.++..+.|+|++++.+++...       ..+
T Consensus        17 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~   96 (342)
T cd07879          17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFY   96 (342)
T ss_pred             eEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEE
Confidence            345678999999999999864 578899998864321123345577899999999999999999887643       358


Q ss_pred             EEEecCCCCChhhh
Q 044522           95 LVYGYPCNGSLDHN  108 (113)
Q Consensus        95 lv~e~~~~g~L~~~  108 (113)
                      +++||+.. ++..+
T Consensus        97 lv~e~~~~-~l~~~  109 (342)
T cd07879          97 LVMPYMQT-DLQKI  109 (342)
T ss_pred             EEeccccc-CHHHH
Confidence            99999864 55543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.58  E-value=5.1e-08  Score=61.17  Aligned_cols=87  Identities=21%  Similarity=0.101  Sum_probs=68.5

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccch------hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA------CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      -.+.+|.|..+.|.++..+ .+...++|.+.....      .......-.+|+.+++.+ .||+++.+.+.+..+ +.++
T Consensus        21 pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~Fl  100 (411)
T KOG0599|consen   21 PKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFL  100 (411)
T ss_pred             hHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhh
Confidence            3567999999988888764 477788888765321      111223456789999988 699999999999999 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      |+|.++.|+|++++.+
T Consensus       101 VFdl~prGELFDyLts  116 (411)
T KOG0599|consen  101 VFDLMPRGELFDYLTS  116 (411)
T ss_pred             hhhhcccchHHHHhhh
Confidence            9999999999999864

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.57  E-value=7.1e-07  Score=57.48  Aligned_cols=86  Identities=19%  Similarity=0.140  Sum_probs=62.9

Q ss_pred             HhcCccccCCCceEEEEEeC-C--CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe----c-eEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-D--GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE----I-VWL   94 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~----~-~~~   94 (113)
                      .+.+.||+|+||.||.+... .  +..+++|.+............+.+|+.++..+ .|+|++++.+....    . ..+
T Consensus         3 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~   82 (332)
T cd07857           3 ELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELY   82 (332)
T ss_pred             eEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEE
Confidence            45677999999999999864 3  66899998765321123345677888888888 59999999886532    2 577


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      ++++++. ++|..++.
T Consensus        83 ~~~e~~~-~~L~~~l~   97 (332)
T cd07857          83 LYEELME-ADLHQIIR   97 (332)
T ss_pred             EEEeccc-CCHHHHHh
Confidence            8888876 57877764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.56  E-value=5.9e-07  Score=53.76  Aligned_cols=80  Identities=18%  Similarity=0.049  Sum_probs=54.3

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccchhH-----------------------HH-HHHHHHHHHHHhhCCCCcc
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACA-----------------------QA-AFQFISEDEILSCAQHRSL   81 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~-----------------------~~-~~~~~~e~~~~~~~~h~~i   81 (113)
                      ...||+|++|.||++...+|..+++|.++......                       .. ...+..|...+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46799999999999986678899999988642100                       00 1123467778888888876


Q ss_pred             ceeeeEEEeceEEEEEecCCCCChh
Q 044522           82 VVLVGYCIEIVWLLVYGYPCNGSLD  106 (113)
Q Consensus        82 ~~l~~~~~~~~~~lv~e~~~~g~L~  106 (113)
                      .....+... ..+++|||++++++.
T Consensus        82 ~~p~~~~~~-~~~lVmE~~~g~~~~  105 (190)
T cd05145          82 PVPEPILLK-KNVLVMEFIGDDGSP  105 (190)
T ss_pred             CCceEEEec-CCEEEEEEecCCCch
Confidence            543333222 347999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.55  E-value=7.3e-07  Score=53.47  Aligned_cols=83  Identities=18%  Similarity=0.126  Sum_probs=58.3

Q ss_pred             ccccCCCceEEEEEeCCCcEEEEEEeeccch------hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           28 TPRRGGFGAVYKGALRDGQVVAVKHHKVMSA------CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .||+|++|.||++.+. +..+++|.......      .......+.+|+.++..+.+.++.......... ..++++||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            3799999999999853 56788887543211      011235577888888888877655444444455 678999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++++|.+++..
T Consensus        80 ~g~~l~~~~~~   90 (199)
T TIGR03724        80 EGKPLKDVIEE   90 (199)
T ss_pred             CCccHHHHHhh
Confidence            99999877643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.54  E-value=7.7e-08  Score=66.36  Aligned_cols=85  Identities=21%  Similarity=0.156  Sum_probs=68.6

Q ss_pred             cCccccCCCceEEEEE-eCCCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGA-LRDGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~-~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      .+.||-|.||.|.... ......+|.|.++..+ ....+......|-+++...+..++|+|+..+.+. .+|+||+|++|
T Consensus       634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPG  713 (1034)
T KOG0608|consen  634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG  713 (1034)
T ss_pred             EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCC
Confidence            3669999999998765 3335568888887654 2345566778888999999999999999999998 99999999999


Q ss_pred             CChhhhcc
Q 044522          103 GSLDHNLC  110 (113)
Q Consensus       103 g~L~~~l~  110 (113)
                      |++-.+|.
T Consensus       714 GDmMSLLI  721 (1034)
T KOG0608|consen  714 GDMMSLLI  721 (1034)
T ss_pred             ccHHHHHH
Confidence            99877654

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.54  E-value=4.7e-07  Score=55.67  Aligned_cols=73  Identities=18%  Similarity=0.103  Sum_probs=56.2

Q ss_pred             CCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCChhhhc
Q 044522           32 GGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        32 g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~~l  109 (113)
                      |.++.||.+... .+..+++|.+....       ....+...+....|+|++++++.+... ..++++||+.+|+|.+++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            789999999864 57889999987542       112233334445699999999998888 999999999999998876


Q ss_pred             cC
Q 044522          110 CG  111 (113)
Q Consensus       110 ~~  111 (113)
                      .+
T Consensus        77 ~~   78 (237)
T cd05576          77 SK   78 (237)
T ss_pred             HH
Confidence            43

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.54  E-value=4.1e-08  Score=62.13  Aligned_cols=79  Identities=16%  Similarity=0.085  Sum_probs=61.7

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhh-CCCCccceeeeEEEec-----eEEEEEec
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSC-AQHRSLVVLVGYCIEI-----VWLLVYGY   99 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~-~~h~~i~~l~~~~~~~-----~~~lv~e~   99 (113)
                      ++||-|..|.|..+..+ .+..+|+|.+....       ...+|+++... ..|+|+|++++++...     -+.+|||+
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~  140 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMEC  140 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcCH-------HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeec
Confidence            67999999999999865 47778888776432       34567775444 4799999999988653     47789999


Q ss_pred             CCCCChhhhccCC
Q 044522          100 PCNGSLDHNLCGP  112 (113)
Q Consensus       100 ~~~g~L~~~l~~~  112 (113)
                      ++||+|+.-|+++
T Consensus       141 meGGeLfsriq~~  153 (400)
T KOG0604|consen  141 MEGGELFSRIQDR  153 (400)
T ss_pred             ccchHHHHHHHHc
Confidence            9999999887654

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.49  E-value=1.9e-06  Score=59.12  Aligned_cols=84  Identities=17%  Similarity=0.112  Sum_probs=59.6

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEe-ec-cch----hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHH-KV-MSA----CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~-~~-~~~----~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.||+|+||.||++.+.... +.+|.. .. ...    .......+.+|+.++..+.|++++......... ..++++
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~  415 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM  415 (535)
T ss_pred             ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence            3678999999999998865432 233322 11 110    011234578899999999999988777666666 788999


Q ss_pred             ecCCCCChhhhc
Q 044522           98 GYPCNGSLDHNL  109 (113)
Q Consensus        98 e~~~~g~L~~~l  109 (113)
                      ||+++++|.+++
T Consensus       416 E~~~g~~L~~~l  427 (535)
T PRK09605        416 EYIGGKDLKDVL  427 (535)
T ss_pred             EecCCCcHHHHH
Confidence            999999998765

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.48  E-value=1.1e-08  Score=70.32  Aligned_cols=84  Identities=24%  Similarity=0.294  Sum_probs=69.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+...+|.|.+|.||++... .+...++|.++..-  .......+.|+.+++..+|+|++.++|.+... ..++.|||+
T Consensus        17 yellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   17 YELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             hhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence            345677999999999999864 57788999988654  34455677888888999999999999999887 899999999


Q ss_pred             CCCChhhh
Q 044522          101 CNGSLDHN  108 (113)
Q Consensus       101 ~~g~L~~~  108 (113)
                      .+|+|.+.
T Consensus        95 gggslQdi  102 (829)
T KOG0576|consen   95 GGGSLQDI  102 (829)
T ss_pred             CCCcccce
Confidence            99998764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.48  E-value=1.4e-08  Score=63.69  Aligned_cols=92  Identities=18%  Similarity=0.213  Sum_probs=70.6

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .....+..+|.+.--|..|+|.|.+ -.+..|.+..........+.|..|...++.+.|||++.++|.|.++ +..++..
T Consensus       189 ~~~lnl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq  267 (448)
T KOG0195|consen  189 VSSLNLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ  267 (448)
T ss_pred             hhhhhhhhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence            3444566677777788899998863 3455555554332244556788888889999999999999999999 9999999


Q ss_pred             cCCCCChhhhccCC
Q 044522           99 YPCNGSLDHNLCGP  112 (113)
Q Consensus        99 ~~~~g~L~~~l~~~  112 (113)
                      ||+.|+|+..+++.
T Consensus       268 ~mp~gslynvlhe~  281 (448)
T KOG0195|consen  268 YMPFGSLYNVLHEQ  281 (448)
T ss_pred             eccchHHHHHHhcC
Confidence            99999999988753

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.46  E-value=3.4e-08  Score=62.87  Aligned_cols=90  Identities=21%  Similarity=0.233  Sum_probs=65.9

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC---C--CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe-c-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR---D--GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-I-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~---~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~-~-~   92 (113)
                      ...+.....||+|.+|.||++...   +  ...+|+|.++.......-.....+|+.+++.+.|+|+++|..+... . .
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            344555677999999999999642   2  2267888877642112233456789999999999999999887776 4 8


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      +++++||.++ +|...|+
T Consensus       103 v~l~fdYAEh-DL~~II~  119 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIK  119 (438)
T ss_pred             EEEEehhhhh-hHHHHHH
Confidence            9999999876 6666553

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.45  E-value=3.2e-07  Score=62.57  Aligned_cols=93  Identities=16%  Similarity=0.058  Sum_probs=69.0

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccch------hHHHHHHHHHHHHHHhhCC---CCccceeeeEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSA------CAQAAFQFISEDEILSCAQ---HRSLVVLVGYC   88 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~------~~~~~~~~~~e~~~~~~~~---h~~i~~l~~~~   88 (113)
                      ++..+...+.+|+|+||.|+.+.++. .-.|.+|.+.....      +.........|+.+|..++   |+|+++++.++
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            44445567889999999999999864 44688888764321      1222345678999999886   99999999999


Q ss_pred             Eec-eEEEEEecC-CCCChhhhccC
Q 044522           89 IEI-VWLLVYGYP-CNGSLDHNLCG  111 (113)
Q Consensus        89 ~~~-~~~lv~e~~-~~g~L~~~l~~  111 (113)
                      +++ +.++++|-- ++-+|+++|.-
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~  663 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEF  663 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhc
Confidence            999 999998843 35567777653

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=2.4e-08  Score=65.80  Aligned_cols=92  Identities=18%  Similarity=0.153  Sum_probs=65.1

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~   94 (113)
                      +.....+..+||+|+||.|..+..++ ...+|||+++.+-. .....+--..|-.++... ..|.++++.+..... .++
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy  426 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY  426 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence            44455678899999999999887553 56799998876531 112222223344444444 467888988888777 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      .||||+.||+|-..|+
T Consensus       427 FVMEyvnGGDLMyhiQ  442 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQ  442 (683)
T ss_pred             eEEEEecCchhhhHHH
Confidence            9999999999876664

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.43  E-value=1.7e-06  Score=52.01  Aligned_cols=85  Identities=19%  Similarity=0.115  Sum_probs=56.9

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHH--------------------HHHHHHHHHHHHhhCCCCc-
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQ--------------------AAFQFISEDEILSCAQHRS-   80 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~--------------------~~~~~~~e~~~~~~~~h~~-   80 (113)
                      .+.+.+.||+|+||.||++...++..+++|..+.......                    .......|...+..+.+.+ 
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            3566888999999999999876788999998765321000                    0112455666777776653 


Q ss_pred             -cceeeeEEEeceEEEEEecCCCCChhhhc
Q 044522           81 -LVVLVGYCIEIVWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        81 -i~~l~~~~~~~~~~lv~e~~~~g~L~~~l  109 (113)
                       +....+   ....++++||+++++|....
T Consensus        96 ~v~~~~~---~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          96 PVPKPID---WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCCceee---cCCceEEEEEeCCcchhhcc
Confidence             333332   23568999999998886654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.41  E-value=1.7e-07  Score=62.27  Aligned_cols=86  Identities=21%  Similarity=0.226  Sum_probs=66.7

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHH-HHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQA-AFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~-~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ..+||+|+||.|+.+..+ .|.-+|.|.+......... ..-...|-.++..++.+.||.+-.++... ..++|+..|.|
T Consensus       190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG  269 (591)
T KOG0986|consen  190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG  269 (591)
T ss_pred             eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence            467999999999998865 4677777776543221112 22245677788899999999999899888 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|..+|.+
T Consensus       270 GDLkfHiyn  278 (591)
T KOG0986|consen  270 GDLKFHIYN  278 (591)
T ss_pred             CceeEEeec
Confidence            999988875

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.39  E-value=1.4e-07  Score=57.95  Aligned_cols=82  Identities=16%  Similarity=0.211  Sum_probs=66.6

Q ss_pred             HHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec---eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI---VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~---~~~l   95 (113)
                      ..+.+-.++|+|.++.|+.|.. .+...+.+|.+++     -.-+...+|+.++..+. |+|++.+.++..++   .+.+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            4455668899999999999984 4567788998884     33456789999999996 99999999999887   6889


Q ss_pred             EEecCCCCChhh
Q 044522           96 VYGYPCNGSLDH  107 (113)
Q Consensus        96 v~e~~~~g~L~~  107 (113)
                      ++|++.+.+...
T Consensus       113 iFE~v~n~Dfk~  124 (338)
T KOG0668|consen  113 IFEYVNNTDFKQ  124 (338)
T ss_pred             HhhhhccccHHH
Confidence            999998776543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.35  E-value=1.1e-06  Score=58.84  Aligned_cols=85  Identities=15%  Similarity=0.070  Sum_probs=64.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-----CC---ccceeeeEEE----
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-----HR---SLVVLVGYCI----   89 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-----h~---~i~~l~~~~~----   89 (113)
                      |.+..+||.|-|++||.+... ..+.||+|+.+.+   ....+....|+.++.++.     |+   .||+|+..+.    
T Consensus        80 Y~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   80 YHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             EEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            345588999999999999864 5788999999876   355667788999888772     22   4788877663    


Q ss_pred             ec-eEEEEEecCCCCChhhhccC
Q 044522           90 EI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        90 ~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      .+ ++++|+|++.. +|..+|..
T Consensus       157 NG~HVCMVfEvLGd-nLLklI~~  178 (590)
T KOG1290|consen  157 NGQHVCMVFEVLGD-NLLKLIKY  178 (590)
T ss_pred             CCcEEEEEehhhhh-HHHHHHHH
Confidence            23 89999998854 67777764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.26  E-value=6.2e-06  Score=50.91  Aligned_cols=83  Identities=11%  Similarity=-0.066  Sum_probs=60.3

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchh-HHHHHH------HHHHHHHHhhCCCCccceeeeEEEec------
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC-AQAAFQ------FISEDEILSCAQHRSLVVLVGYCIEI------   91 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~-~~~~~~------~~~e~~~~~~~~h~~i~~l~~~~~~~------   91 (113)
                      ..+.+|.|+||.||.... .+..+++|.++..... ......      +.+|+..+..+.|+++..+.......      
T Consensus        35 ~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~  113 (232)
T PRK10359         35 TIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR  113 (232)
T ss_pred             EEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence            457799999999998544 4567999998764321 122222      46787888888999998887664422      


Q ss_pred             ---eEEEEEecCCCCChhhh
Q 044522           92 ---VWLLVYGYPCNGSLDHN  108 (113)
Q Consensus        92 ---~~~lv~e~~~~g~L~~~  108 (113)
                         ..+++|||++|.+|.++
T Consensus       114 ~~~~~~lvmEyi~G~tL~~~  133 (232)
T PRK10359        114 YAHTYIMLIEYIEGVELNDM  133 (232)
T ss_pred             ccCCeEEEEEEECCccHHHh
Confidence               47899999999988765

>smart00090 RIO RIO-like kinase

Probab=98.21  E-value=2.2e-05  Score=48.70  Aligned_cols=85  Identities=16%  Similarity=0.024  Sum_probs=56.5

Q ss_pred             HhHhcCccccCCCceEEEEE--eCCCcEEEEEEeeccchhH---------------------H-HHHHHHHHHHHHhhCC
Q 044522           22 ASTLGKTPRRGGFGAVYKGA--LRDGQVVAVKHHKVMSACA---------------------Q-AAFQFISEDEILSCAQ   77 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~--~~~~~~~~ik~~~~~~~~~---------------------~-~~~~~~~e~~~~~~~~   77 (113)
                      .+.+.+.||+|++|.||++.  ...+..+++|.++......                     + ....+..|...+..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999998  3568899999987542100                     0 0122457888887776


Q ss_pred             CCc--cceeeeEEEeceEEEEEecCCCCChhhhc
Q 044522           78 HRS--LVVLVGYCIEIVWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        78 h~~--i~~l~~~~~~~~~~lv~e~~~~g~L~~~l  109 (113)
                      +..  +..++.   ....++++||+++.++....
T Consensus       109 ~~~i~~p~~~~---~~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPIA---WRRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeeeE---ecCceEEEEEecCCcccccc
Confidence            432  223332   23457999999998776543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.17  E-value=5.7e-07  Score=58.11  Aligned_cols=88  Identities=20%  Similarity=0.150  Sum_probs=65.4

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +..+||+|++++|....+. ....+|+|.++..- .........+-|-.+.-.. +||.++-+.+++... ..++|.||+
T Consensus       254 ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv  333 (593)
T KOG0695|consen  254 LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYV  333 (593)
T ss_pred             eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEe
Confidence            4578999999999887764 35678999876532 1133444555555555554 799999999988888 999999999


Q ss_pred             CCCChhhhccCC
Q 044522          101 CNGSLDHNLCGP  112 (113)
Q Consensus       101 ~~g~L~~~l~~~  112 (113)
                      ++|+|-.++++.
T Consensus       334 ~ggdlmfhmqrq  345 (593)
T KOG0695|consen  334 NGGDLMFHMQRQ  345 (593)
T ss_pred             cCcceeeehhhh
Confidence            999988776643

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.08  E-value=5.1e-06  Score=54.73  Aligned_cols=85  Identities=27%  Similarity=0.359  Sum_probs=62.0

Q ss_pred             hcCccccCCCceEEEEEeCCCc------EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEE
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQ------VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLV   96 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~------~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv   96 (113)
                      +...+.+|.||.+|+|+|+++.      .+-+|.++.-. ..-+...+..|.-++..+.|+|+.++.+++...  .+++.
T Consensus       288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~  366 (563)
T KOG1024|consen  288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL  366 (563)
T ss_pred             chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence            3566889999999999886422      22233332211 022344567777788889999999999999766  78899


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +.++.-|+|..+++
T Consensus       367 y~~~~~gNLK~FL~  380 (563)
T KOG1024|consen  367 YPATGVGNLKSFLQ  380 (563)
T ss_pred             EeccCcchHHHHHH
Confidence            99999999998876

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.06  E-value=2.4e-06  Score=53.58  Aligned_cols=79  Identities=19%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHH-HhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEI-LSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~-~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      ..||.|+||.|++=.++ .+...|+|.++.... ....+++..|... ++.-+.+++|+++|++..+ ..++-||.|.- 
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-  147 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-  147 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence            45999999999987654 588899999987653 3455667777774 5555789999999999998 99999998863 


Q ss_pred             Chhh
Q 044522          104 SLDH  107 (113)
Q Consensus       104 ~L~~  107 (113)
                      +++.
T Consensus       148 SlDk  151 (361)
T KOG1006|consen  148 SLDK  151 (361)
T ss_pred             hHHH
Confidence            4443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.04  E-value=6.7e-06  Score=58.14  Aligned_cols=79  Identities=18%  Similarity=0.137  Sum_probs=61.0

Q ss_pred             cCccccCCCce-EEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGA-VYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~-v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      .+.+|.|.-|. ||+|.+. ++.||+|.+-.     ....-..+|+..+... .|+|++++++.-.+. +.||..|.|. 
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-  586 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-  586 (903)
T ss_pred             HHHcccCCCCcEEEEEeeC-CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-
Confidence            45678888754 6889874 67899997663     3334456888888777 699999999988888 9999999886 


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      .+|.+++..
T Consensus       587 ~sL~dlie~  595 (903)
T KOG1027|consen  587 CSLQDLIES  595 (903)
T ss_pred             hhHHHHHhc
Confidence            478888764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.97  E-value=5.3e-05  Score=42.82  Aligned_cols=76  Identities=16%  Similarity=0.017  Sum_probs=57.4

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCC--CccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH--RSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h--~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      .+.+|.|.++.+|++...+ ..+++|......  .  ...+..|...+..+.+  ..+++++...... ..++++||+.+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~--~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g   77 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSRE--K--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG   77 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCC--c--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence            3568999999999998643 678899876543  1  3456777777777755  4777877777666 89999999998


Q ss_pred             CChh
Q 044522          103 GSLD  106 (113)
Q Consensus       103 g~L~  106 (113)
                      +.+.
T Consensus        78 ~~~~   81 (155)
T cd05120          78 ETLD   81 (155)
T ss_pred             eecc
Confidence            7765

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.96  E-value=1.5e-05  Score=48.50  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=61.9

Q ss_pred             cCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHH-HhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEI-LSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~-~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      .+.||+|++|.|-+-.+ ..|...|+|.+...-. .+..++..+++.+ +++...|..+.++|.+.+. .+++-||.|..
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence            46799999998876554 3578899999887653 4556677788875 5566899999999999998 99999998863


Q ss_pred             CChhh
Q 044522          103 GSLDH  107 (113)
Q Consensus       103 g~L~~  107 (113)
                       +|+.
T Consensus       130 -Sldk  133 (282)
T KOG0984|consen  130 -SLDK  133 (282)
T ss_pred             -hHHH
Confidence             4443

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.95  E-value=2.4e-05  Score=54.17  Aligned_cols=85  Identities=22%  Similarity=0.254  Sum_probs=50.4

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-C----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCcccee----ee-E-EE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-D----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL----VG-Y-CI   89 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l----~~-~-~~   89 (113)
                      ..+.+.+.||+|+||.||++.+. .    +..+++|.+.....  .  .....+.  +....+.++..+    .. . +.
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~--e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--V--EIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--h--HHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            34556788999999999999864 3    57899998764321  1  1111110  111111111111    00 0 23


Q ss_pred             ec-eEEEEEecCCCCChhhhccC
Q 044522           90 EI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        90 ~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      .. ..++++||+.+++|.+++..
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~  228 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQS  228 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHh
Confidence            34 78999999999999887753

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.94  E-value=6.6e-05  Score=44.53  Aligned_cols=31  Identities=32%  Similarity=0.275  Sum_probs=26.5

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeecc
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVM   56 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~   56 (113)
                      .+.||+|+||.||.+...++..+++|.++..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence            5679999999999998766889999988754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.86  E-value=7.7e-06  Score=56.13  Aligned_cols=85  Identities=20%  Similarity=0.053  Sum_probs=64.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHH-HhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEI-LSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~-~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+...+|.|+|+.+..+... .....++|.+....      ....+|+.+ +..-.|+|++++.+.+.++ +.++|+
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             hhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            34556777999999999988864 46678888876542      122344533 4445899999999999999 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      |.+.++.+.+-++.
T Consensus       396 e~l~g~ell~ri~~  409 (612)
T KOG0603|consen  396 ELLDGGELLRRIRS  409 (612)
T ss_pred             hhccccHHHHHHHh
Confidence            99999998876654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.86  E-value=0.00011  Score=49.55  Aligned_cols=30  Identities=30%  Similarity=0.275  Sum_probs=27.1

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeecc
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVM   56 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~   56 (113)
                      +.+|.|++|+||++.+++|..|+||..++.
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            569999999999999888999999998765

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.82  E-value=1.9e-05  Score=49.85  Aligned_cols=87  Identities=16%  Similarity=0.214  Sum_probs=64.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--~~~lv   96 (113)
                      ..+.+.+.+|+|-||.+..+.++. ...+++|.++..   .-..+.|.+|-.---.+ .|.+++.-+.+..+.  ...++
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p---~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP---QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc---hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            355678889999999999988754 667899988764   24556688776543334 588888776655444  67789


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||.+.|+|..-+.
T Consensus       101 qE~aP~gdL~snv~  114 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVE  114 (378)
T ss_pred             eccCccchhhhhcC
Confidence            99999999987654

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=97.79  E-value=1.4e-06  Score=58.89  Aligned_cols=91  Identities=19%  Similarity=0.061  Sum_probs=71.2

Q ss_pred             HhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ....-..||-|+||.|-...... ...+|+|+++..+. +..+.....+|-.+|...+++.+++++--+.+. ++|++||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            33445679999999997765433 23477887776542 345566778888888888999999999999999 9999999


Q ss_pred             cCCCCChhhhccCC
Q 044522           99 YPCNGSLDHNLCGP  112 (113)
Q Consensus        99 ~~~~g~L~~~l~~~  112 (113)
                      -|-||+|...++++
T Consensus       501 aClGGElWTiLrdR  514 (732)
T KOG0614|consen  501 ACLGGELWTILRDR  514 (732)
T ss_pred             hhcCchhhhhhhhc
Confidence            99999999988865

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.71  E-value=0.00071  Score=41.48  Aligned_cols=80  Identities=10%  Similarity=-0.005  Sum_probs=56.0

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHH--HHHHHHHHHHHHhhCC-CCccceeeeEEEeceEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQ--AAFQFISEDEILSCAQ-HRSLVVLVGYCIEIVWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~~~~lv~e~~~  101 (113)
                      ....++++.||.|+.... .+..+..+.+........  ....+.+|+.++..+. +++++.++++   ...++++||+.
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~~lvmeyI~   81 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---DGRHLDRSYLA   81 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCEEEEEeeec
Confidence            356799999999995543 466677666655432111  2234778999999995 5778888764   34689999999


Q ss_pred             CCChhhh
Q 044522          102 NGSLDHN  108 (113)
Q Consensus       102 ~g~L~~~  108 (113)
                      |.+|...
T Consensus        82 G~~L~~~   88 (218)
T PRK12274         82 GAAMYQR   88 (218)
T ss_pred             CccHHhh
Confidence            8888654

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.71  E-value=5.8e-05  Score=51.96  Aligned_cols=30  Identities=27%  Similarity=0.245  Sum_probs=26.7

Q ss_pred             CccccCCCceEEEEEeCC-CcEEEEEEeecc
Q 044522           27 KTPRRGGFGAVYKGALRD-GQVVAVKHHKVM   56 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~   56 (113)
                      +.+|+|++|+||++.+++ |..|++|.+++.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            469999999999999876 899999999864

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.67  E-value=3.5e-05  Score=50.73  Aligned_cols=83  Identities=19%  Similarity=0.163  Sum_probs=65.7

Q ss_pred             HhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...++||+|.|+.||.+...    ....+++|.+....    .......|+.++..+ .+.|++.+.++.... ...+|+
T Consensus        39 ~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl  114 (418)
T KOG1167|consen   39 KVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL  114 (418)
T ss_pred             hhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence            45688999999999998742    35679999887653    334577888888888 589999999999888 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||++.-...++.+
T Consensus       115 p~~~H~~f~~l~~  127 (418)
T KOG1167|consen  115 PYFEHDRFRDLYR  127 (418)
T ss_pred             cccCccCHHHHHh
Confidence            9998876655543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.60  E-value=0.001  Score=41.65  Aligned_cols=84  Identities=27%  Similarity=0.358  Sum_probs=65.5

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchhH-HHHHHHHHHHHHHhhCCCC-ccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACA-QAAFQFISEDEILSCAQHR-SLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~~~~~~h~-~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +...+|.|+|+.||.+...  ..+++|.+....... .....+.+|...+..+.|+ +++.+....... ..+++++++.
T Consensus         4 ~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           4 ILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             eEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            4567889999999998865  667888877654212 2466788888899999877 799998888666 6899999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      ++++..++.
T Consensus        82 ~~~l~~~~~   90 (384)
T COG0515          82 GGSLEDLLK   90 (384)
T ss_pred             CCcHHHHHH
Confidence            999885554

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.58  E-value=4.4e-06  Score=52.77  Aligned_cols=82  Identities=17%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEEEEe
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLLVYG   98 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~lv~e   98 (113)
                      ...||-|.||.||...++ ++..++.|.+.--....-..+.+.+|..+++-..|.|++..+++...+      ++|+++|
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            577999999999987653 577888887664332233457788999999999999999988877543      4556666


Q ss_pred             cCCCCChhhh
Q 044522           99 YPCNGSLDHN  108 (113)
Q Consensus        99 ~~~~g~L~~~  108 (113)
                      .+.. +|...
T Consensus       138 LmQS-DLHKI  146 (449)
T KOG0664|consen  138 LMQS-DLHKI  146 (449)
T ss_pred             HHHh-hhhhe
Confidence            6542 44443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.53  E-value=0.00011  Score=47.76  Aligned_cols=82  Identities=21%  Similarity=0.182  Sum_probs=57.0

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.++++||+|+||..+.|.. -.+..||||.=+..    ..+-++..|....+.+ .-+.|..++.+-..+ +-.+|+|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEecccc----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            345789999999999999973 35889999974432    2223455565555555 457788887777777 7788888


Q ss_pred             cCCCCChhhh
Q 044522           99 YPCNGSLDHN  108 (113)
Q Consensus        99 ~~~~g~L~~~  108 (113)
                      .+. -+|.++
T Consensus       105 LLG-PSLEDL  113 (449)
T KOG1165|consen  105 LLG-PSLEDL  113 (449)
T ss_pred             hhC-cCHHHH
Confidence            763 456554

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.51  E-value=0.00018  Score=45.67  Aligned_cols=75  Identities=17%  Similarity=0.239  Sum_probs=59.0

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ...+|+|+.|.||+..++ .+...|+|....... ....+...+.++++... +.|.+|+.+|++... .+++-||.|.
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N-kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs  174 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS  174 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCC-HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence            355899999999999875 477899999877553 56677788888866555 589999999999887 7777777663

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.37  E-value=1.1e-06  Score=54.80  Aligned_cols=87  Identities=23%  Similarity=0.317  Sum_probs=60.3

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--------c-eEE
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--------I-VWL   94 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--------~-~~~   94 (113)
                      -..++|+|.||.|+++..+ .+..|++|.+--..........-.+|+.++..+.|+|++.+..+|..        . .++
T Consensus        21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y  100 (376)
T KOG0669|consen   21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY  100 (376)
T ss_pred             HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence            3566999999999988754 35556766543211112233456789999999999999998887753        1 488


Q ss_pred             EEEecCCCCChhhhccCC
Q 044522           95 LVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~~  112 (113)
                      +|+.+++. +|.-++.+.
T Consensus       101 lVf~~ceh-DLaGlLsn~  117 (376)
T KOG0669|consen  101 LVFDFCEH-DLAGLLSNR  117 (376)
T ss_pred             eeHHHhhh-hHHHHhcCc
Confidence            99999875 666665543

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.36  E-value=0.0024  Score=40.62  Aligned_cols=80  Identities=14%  Similarity=0.105  Sum_probs=47.5

Q ss_pred             HhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHH-H--------HHHHHHHHHHHhhCCCCccceeeeEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQ-A--------AFQFISEDEILSCAQHRSLVVLVGYC   88 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~-~--------~~~~~~e~~~~~~~~h~~i~~l~~~~   88 (113)
                      .+.+.+.||+|+||.||++....    +..+++|.......... .        ......+...+..+.|++++.+++.+
T Consensus        13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~   92 (294)
T PHA02882         13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG   92 (294)
T ss_pred             ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence            45678899999999999998643    33556665432221000 0        01112233345567899999998876


Q ss_pred             Eec-----eEEEEEecCC
Q 044522           89 IEI-----VWLLVYGYPC  101 (113)
Q Consensus        89 ~~~-----~~~lv~e~~~  101 (113)
                      ...     ..+++++++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~  110 (294)
T PHA02882         93 SFKRCRMYYRFILLEKLV  110 (294)
T ss_pred             eEecCCceEEEEEEehhc
Confidence            543     3356666553

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.33  E-value=0.00015  Score=52.83  Aligned_cols=86  Identities=20%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhH-HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACA-QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+...+|+|++|.||++...++..+|+|.-.+...+. .-..++...+.   ..--+.+..+..+.... .-.++.||.
T Consensus       700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk---~~~~~~~~~~~~a~~~~~~S~lv~ey~  776 (974)
T KOG1166|consen  700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK---PQMLPSIMHISSAHVFQNASVLVSEYS  776 (974)
T ss_pred             EEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc---hhhhcchHHHHHHHccCCcceeeeecc
Confidence            34678899999999999997678999999877643211 11111211111   00112333344444445 677899999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      +.|+|.+++..
T Consensus       777 ~~Gtlld~~N~  787 (974)
T KOG1166|consen  777 PYGTLLDLINT  787 (974)
T ss_pred             ccccHHHhhcc
Confidence            99999998763

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.29  E-value=0.00032  Score=46.04  Aligned_cols=84  Identities=19%  Similarity=0.038  Sum_probs=57.2

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC--CCc----cceeeeEEEec-eEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ--HRS----LVVLVGYCIEI-VWLL   95 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~--h~~----i~~l~~~~~~~-~~~l   95 (113)
                      .+-..+|+|.||.|.++... .+..+|+|+++.-.   .......-|+.++..+.  .|+    .+++.++.... ++++
T Consensus        92 ~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi  168 (415)
T KOG0671|consen   92 EIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI  168 (415)
T ss_pred             ehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence            35577999999999999864 36789999887532   33334455677777662  222    34555556556 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      |+|.+. -++++++.+
T Consensus       169 vfellG-~S~~dFlk~  183 (415)
T KOG0671|consen  169 VFELLG-LSTFDFLKE  183 (415)
T ss_pred             EEeccC-hhHHHHhcc
Confidence            999774 367777765

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.16  E-value=0.00042  Score=43.36  Aligned_cols=83  Identities=23%  Similarity=0.270  Sum_probs=54.4

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCC-CccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH-RSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+-++||+|+||.+|.|.. ..|..||+|.=....    ...++..|..+...+++ ..+..+.-+.... +-.+||+
T Consensus        16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ceEEEEeecCCchhheeeeeeccCCceEEEEeecccC----CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            344568899999999999984 578999999744321    12245567777777754 3444444444444 7778998


Q ss_pred             cCCCCChhhhc
Q 044522           99 YPCNGSLDHNL  109 (113)
Q Consensus        99 ~~~~g~L~~~l  109 (113)
                      .+ |-+|.+++
T Consensus        92 LL-GPsLEdLf  101 (341)
T KOG1163|consen   92 LL-GPSLEDLF  101 (341)
T ss_pred             cc-CccHHHHH
Confidence            76 45666553

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.09  E-value=0.0019  Score=41.81  Aligned_cols=85  Identities=22%  Similarity=0.169  Sum_probs=56.7

Q ss_pred             HhHhcCccccCCCceEEEEEeCC--CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC----CCccceeeeEE-Eec-eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD--GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ----HRSLVVLVGYC-IEI-VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~----h~~i~~l~~~~-~~~-~~   93 (113)
                      .+.+...||+|+||.||.+....  ...+++|.-.....  .....+..|..++..+.    ...+..+.... ... .-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~--~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG--SKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc--CCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            56778999999999999998643  24678887654321  11114556666666664    24666777666 355 78


Q ss_pred             EEEEecCCCCChhhhc
Q 044522           94 LLVYGYPCNGSLDHNL  109 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l  109 (113)
                      ++||+.+ |-+|.++.
T Consensus        97 ~iVM~l~-G~sL~dl~  111 (322)
T KOG1164|consen   97 FIVMSLL-GPSLEDLR  111 (322)
T ss_pred             EEEEecc-CccHHHHH
Confidence            8888865 45677654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.88  E-value=0.0039  Score=37.68  Aligned_cols=82  Identities=12%  Similarity=0.107  Sum_probs=55.5

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCC--ccceeeeEEEec----eEEEEEecC
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR--SLVVLVGYCIEI----VWLLVYGYP  100 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~--~i~~l~~~~~~~----~~~lv~e~~  100 (113)
                      +.++.|..+.+|+....++..+++|....... ......+..|...+..+.+.  .+.+++......    ..++++||+
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~-~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL-LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCccc-CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            35788999999998765557788998765321 11234567778777777543  345566655442    457999999


Q ss_pred             CCCChhhhc
Q 044522          101 CNGSLDHNL  109 (113)
Q Consensus       101 ~~g~L~~~l  109 (113)
                      ++.++...+
T Consensus        83 ~G~~l~~~~   91 (223)
T cd05154          83 DGRVLRDRL   91 (223)
T ss_pred             CCEecCCCC
Confidence            988876644

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.77  E-value=0.0065  Score=35.29  Aligned_cols=76  Identities=12%  Similarity=0.010  Sum_probs=47.3

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCcc-ceeeeEEEeceEEEEEecCCCCCh
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSL-VVLVGYCIEIVWLLVYGYPCNGSL  105 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i-~~l~~~~~~~~~~lv~e~~~~g~L  105 (113)
                      +.++.|.++.+|+.... +..+++|......   .....+..|...+..+.+.++ .+++... ....++++||+++.++
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~~~~~lv~e~i~G~~l   78 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGT---ELLINRENEAENSKLAAEAGIGPKLYYFD-PETGVLITEFIEGSEL   78 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCc---ccccCHHHHHHHHHHHHHhCCCCceEEEe-CCCCeEEEEecCCCcc
Confidence            34778889999988754 5678999875432   111224456666665543333 3444332 2245789999999877


Q ss_pred             hh
Q 044522          106 DH  107 (113)
Q Consensus       106 ~~  107 (113)
                      ..
T Consensus        79 ~~   80 (170)
T cd05151          79 LT   80 (170)
T ss_pred             cc
Confidence            63

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.62  E-value=0.0083  Score=36.01  Aligned_cols=78  Identities=21%  Similarity=0.145  Sum_probs=52.2

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCCC
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGS  104 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g~  104 (113)
                      ....|++|.++.||.|.+. +..+++|.-+.+.    ....+..|+.++..+...++.+  .++..+..++.|||+.|-.
T Consensus        26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p--~vy~yg~~~i~me~i~G~~   98 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTP--EVYFYGEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhcccccEEEEeecc-CceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCc--eEEEechhhhhhhhhcCcc
Confidence            3566999999999999886 4578888766543    2345667777777766555543  2223333445599999877


Q ss_pred             hhhhc
Q 044522          105 LDHNL  109 (113)
Q Consensus       105 L~~~l  109 (113)
                      |.++-
T Consensus        99 L~~~~  103 (201)
T COG2112          99 LGKLE  103 (201)
T ss_pred             hhhhh
Confidence            76653

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.60  E-value=0.039  Score=34.42  Aligned_cols=85  Identities=11%  Similarity=-0.042  Sum_probs=53.2

Q ss_pred             cCccc-cCCCceEEEEEeCCCcEEEEEEeeccch-----------hHHHHHHHHHHHHHHhhCCCCcc--ceeeeEEEec
Q 044522           26 GKTPR-RGGFGAVYKGALRDGQVVAVKHHKVMSA-----------CAQAAFQFISEDEILSCAQHRSL--VVLVGYCIEI   91 (113)
Q Consensus        26 ~~~lg-~g~~~~v~~~~~~~~~~~~ik~~~~~~~-----------~~~~~~~~~~e~~~~~~~~h~~i--~~l~~~~~~~   91 (113)
                      +..+| .|+.|.+|..... +..+++|.+.....           .......+.+|..++..+.|.++  +..++.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            34566 6777777776543 56788887753210           00122446778889999887774  5556554332


Q ss_pred             -----eEEEEEecCCC-CChhhhccC
Q 044522           92 -----VWLLVYGYPCN-GSLDHNLCG  111 (113)
Q Consensus        92 -----~~~lv~e~~~~-g~L~~~l~~  111 (113)
                           ..++++|++++ .+|.+++.+
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQE  140 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhc
Confidence                 23599999997 678776543

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.71  E-value=0.0079  Score=33.48  Aligned_cols=31  Identities=26%  Similarity=0.315  Sum_probs=27.4

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccc
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMS   57 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~   57 (113)
                      +.++.++.++||++.+++|..+++|..++..
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i   47 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPGI   47 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchHH
Confidence            5699999999999998889999999988653

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=94.83  E-value=0.026  Score=39.28  Aligned_cols=78  Identities=21%  Similarity=0.088  Sum_probs=51.0

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCC------ccceeeeEEEec-eEEEEEe
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR------SLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~------~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ...|+|.|+.|.++... .+..||||+++-..   -..+.=..|+.++..++..      +.++++..+... ++++|+|
T Consensus       438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE  514 (752)
T KOG0670|consen  438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFE  514 (752)
T ss_pred             eccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEeh
Confidence            44788999999999853 47799999998643   3344556677777766321      234555444444 8889988


Q ss_pred             cCCCCChhhh
Q 044522           99 YPCNGSLDHN  108 (113)
Q Consensus        99 ~~~~g~L~~~  108 (113)
                      -+. -+|-+.
T Consensus       515 ~Ls-lNLRev  523 (752)
T KOG0670|consen  515 PLS-LNLREV  523 (752)
T ss_pred             hhh-chHHHH
Confidence            653 244443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.66  E-value=0.25  Score=34.54  Aligned_cols=31  Identities=23%  Similarity=0.275  Sum_probs=27.7

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccc
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMS   57 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~   57 (113)
                      +.++.++.|+||++.+++|..|+||+.++.-
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi  161 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGI  161 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCCh
Confidence            6688999999999999889999999988754

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=94.58  E-value=0.26  Score=34.60  Aligned_cols=31  Identities=23%  Similarity=0.255  Sum_probs=27.8

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccc
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMS   57 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~   57 (113)
                      +.|+..+.++|+++.+++|..+++|+.++.-
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l  197 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGL  197 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcCh
Confidence            6699999999999999889999999988753

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=93.96  E-value=0.049  Score=37.50  Aligned_cols=38  Identities=21%  Similarity=0.342  Sum_probs=34.6

Q ss_pred             hhCCCCccceeeeEEEec-eEEEEEecCCCCChhhhccC
Q 044522           74 SCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        74 ~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      +.+.|.|+.+++|++.++ ..+++.+|+..|+|.+.+.+
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~   40 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN   40 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence            467899999999999999 99999999999999998765

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=93.74  E-value=0.017  Score=37.60  Aligned_cols=79  Identities=19%  Similarity=0.148  Sum_probs=52.4

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEEEEEe
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWLLVYG   98 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~lv~e   98 (113)
                      ..++.|.- .|..+... .+..+++|...........++...+|..++.++.|+|+++++.++...       +.++|+|
T Consensus        23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e  101 (369)
T KOG0665|consen   23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME  101 (369)
T ss_pred             cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence            33455544 33333322 366778776654332245567778899999999999999999888542       6889999


Q ss_pred             cCCCCChhh
Q 044522           99 YPCNGSLDH  107 (113)
Q Consensus        99 ~~~~g~L~~  107 (113)
                      +|.. +|..
T Consensus       102 ~m~~-nl~~  109 (369)
T KOG0665|consen  102 LMDA-NLCQ  109 (369)
T ss_pred             hhhh-HHHH
Confidence            9864 4443

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=93.72  E-value=0.51  Score=30.51  Aligned_cols=83  Identities=19%  Similarity=0.147  Sum_probs=54.1

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHH--------------------HHHHHHHHHHHhhCCCC--
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQA--------------------AFQFISEDEILSCAQHR--   79 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~--------------------~~~~~~e~~~~~~~~h~--   79 (113)
                      -+.+++.||-|.=+.||.+....+..+++|.-+........                    .....+|...|.++...  
T Consensus        92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            44678999999999999999887889999976543210110                    11234566667666433  


Q ss_pred             ccceeeeEEEeceEEEEEecCCCCChhh
Q 044522           80 SLVVLVGYCIEIVWLLVYGYPCNGSLDH  107 (113)
Q Consensus        80 ~i~~l~~~~~~~~~~lv~e~~~~g~L~~  107 (113)
                      .+...+++.   ...++||++.|-.|..
T Consensus       172 ~VP~P~~~n---RHaVvMe~ieG~eL~~  196 (304)
T COG0478         172 KVPKPIAWN---RHAVVMEYIEGVELYR  196 (304)
T ss_pred             CCCCccccc---cceeeeehcccceeec
Confidence            444443322   5778999998866654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=93.33  E-value=0.39  Score=29.53  Aligned_cols=65  Identities=22%  Similarity=0.246  Sum_probs=42.0

Q ss_pred             hHhcCccccCCC-ceEEEEEeCCCcEEEEEEeecc---ch----------hH------HHHHHHHHHHHHHhhCC---CC
Q 044522           23 STLGKTPRRGGF-GAVYKGALRDGQVVAVKHHKVM---SA----------CA------QAAFQFISEDEILSCAQ---HR   79 (113)
Q Consensus        23 ~~~~~~lg~g~~-~~v~~~~~~~~~~~~ik~~~~~---~~----------~~------~~~~~~~~e~~~~~~~~---h~   79 (113)
                      ..+.+.+|.|.. |.||+.... |..+|+|.....   ..          ..      .....|..|++...++.   +.
T Consensus        39 I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e  117 (207)
T PF13095_consen   39 IEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGRE  117 (207)
T ss_pred             EeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcccc
Confidence            345678999999 999998765 568999982211   00          00      12345778888777764   33


Q ss_pred             cc--ceeeeEE
Q 044522           80 SL--VVLVGYC   88 (113)
Q Consensus        80 ~i--~~l~~~~   88 (113)
                      .+  ++.+|+.
T Consensus       118 ~~~Avkc~Gyl  128 (207)
T PF13095_consen  118 GLWAVKCHGYL  128 (207)
T ss_pred             CceEEEeeEEE
Confidence            34  7777776

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=93.01  E-value=0.018  Score=40.38  Aligned_cols=84  Identities=20%  Similarity=0.158  Sum_probs=57.5

Q ss_pred             ccccCCCceEEEEE-e---CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecCC
Q 044522           28 TPRRGGFGAVYKGA-L---RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        28 ~lg~g~~~~v~~~~-~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      ++|+|.+|.|+... .   ..+..++.|.+...............|..++...+ |+.++.+....... ..+++.+|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            36889999887532 1   23566777777654321111113444555666665 99999999888888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|++...+.+
T Consensus        81 gg~lft~l~~   90 (612)
T KOG0603|consen   81 GGDLFTRLSK   90 (612)
T ss_pred             cchhhhcccc
Confidence            9999887654

>PLN02876 acyl-CoA dehydrogenase

Probab=92.45  E-value=1  Score=33.33  Aligned_cols=76  Identities=12%  Similarity=0.147  Sum_probs=47.6

Q ss_pred             cccCCCceEEEEEeCCC---cEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCcc--ceeeeEEEec----eEEEEEe
Q 044522           29 PRRGGFGAVYKGALRDG---QVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSL--VVLVGYCIEI----VWLLVYG   98 (113)
Q Consensus        29 lg~g~~~~v~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i--~~l~~~~~~~----~~~lv~e   98 (113)
                      ++.|..+.+|.-....+   ..+.++..+.... ......+.+|..++..+. |.++  .+++.+|.+.    ..++|||
T Consensus        46 l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~-~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME  124 (822)
T PLN02876         46 FGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL-LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIME  124 (822)
T ss_pred             eCCCCcCceEEEEECCCCcceeEEEEeCCCCcc-CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEE
Confidence            56677777777554332   3466665543221 122335678888888874 5554  6777777653    5789999


Q ss_pred             cCCCCCh
Q 044522           99 YPCNGSL  105 (113)
Q Consensus        99 ~~~~g~L  105 (113)
                      |+++..+
T Consensus       125 ~v~G~~~  131 (822)
T PLN02876        125 YLEGRIF  131 (822)
T ss_pred             ecCCccc
Confidence            9997653

>PRK10593 hypothetical protein; Provisional

Probab=92.12  E-value=1.2  Score=28.80  Aligned_cols=75  Identities=11%  Similarity=-0.047  Sum_probs=49.1

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCC---CccceeeeEEEe---c-eEEEEEec
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH---RSLVVLVGYCIE---I-VWLLVYGY   99 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h---~~i~~l~~~~~~---~-~~~lv~e~   99 (113)
                      +.|+.|..+.+|+-...++ .+.+|..+..    .....+..|...+..+..   ..+.++++.+..   . ..+++||+
T Consensus        20 ~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         20 ECISEQPYAALWALYDSQG-NPMPLMARSF----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eecCCccceeEEEEEcCCC-CEEEEEeccc----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            4588899999998654434 3555654321    122356677777777643   346677877753   2 58999999


Q ss_pred             CCCCChh
Q 044522          100 PCNGSLD  106 (113)
Q Consensus       100 ~~~g~L~  106 (113)
                      ++++++.
T Consensus        95 i~G~~~~  101 (297)
T PRK10593         95 LRGVSVE  101 (297)
T ss_pred             cCCEecC
Confidence            9987663

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=92.03  E-value=1.8  Score=26.48  Aligned_cols=74  Identities=14%  Similarity=0.012  Sum_probs=47.9

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccch--------------hHHHHHHHHHHHHHHh------hCCCCccceee
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSA--------------CAQAAFQFISEDEILS------CAQHRSLVVLV   85 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~--------------~~~~~~~~~~e~~~~~------~~~h~~i~~l~   85 (113)
                      ...||+|+...||..  +.....+||+......              ......+..+|+.-..      ...+..+.+++
T Consensus         6 ~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            356899999888875  3455678888765440              0011233444443322      22477788999


Q ss_pred             eEEEec-eEEEEEecCC
Q 044522           86 GYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        86 ~~~~~~-~~~lv~e~~~  101 (113)
                      |+.... ...+++|.+.
T Consensus        84 G~veT~~G~Glv~e~I~  100 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIR  100 (199)
T ss_pred             EEEecCCceEEEEEEEE
Confidence            999998 8899999864

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=91.65  E-value=0.35  Score=34.05  Aligned_cols=69  Identities=22%  Similarity=0.158  Sum_probs=47.8

Q ss_pred             EEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEEEEecCCC-CChhh
Q 044522           37 VYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLLVYGYPCN-GSLDH  107 (113)
Q Consensus        37 v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~lv~e~~~~-g~L~~  107 (113)
                      -|++.. .+|..+++|+++...  .........-+..+..+.|.|++++..+...    . .+.+|++|.+. ++|.+
T Consensus       292 tyk~~s~~DG~~YvLkRlhg~r--~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  292 TYKATSNVDGNAYVLKRLHGDR--DQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             eEeeeeccCCceeeeeeecccc--ccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            455553 357889999986543  2333344455678899999999999887762    3 78899999874 44544

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=90.31  E-value=0.77  Score=33.07  Aligned_cols=56  Identities=18%  Similarity=0.048  Sum_probs=41.6

Q ss_pred             CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           44 DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        44 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.++.+.......  ........+.+..++.++|||+++++...... ..|+|+|-+.
T Consensus        36 ~~~~vsVF~~~~~~--~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSN--GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             cCCceEEEEEeCCC--chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence            46677777766543  22233455677788999999999999988888 9999999763

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=90.19  E-value=0.074  Score=37.71  Aligned_cols=89  Identities=17%  Similarity=0.186  Sum_probs=57.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC--CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD--GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ..+.+...+|+|+|+.+.......  ...++.+.+...............|...-..+. |.|++.+++..... ..++.
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            344556668999999887665422  334555554433211122233333444445554 99999999999998 88999


Q ss_pred             EecCCCCChhhhc
Q 044522           97 YGYPCNGSLDHNL  109 (113)
Q Consensus        97 ~e~~~~g~L~~~l  109 (113)
                      .++..+++++.-+
T Consensus       100 ~~~s~g~~~f~~i  112 (601)
T KOG0590|consen  100 LSYSDGGSLFSKI  112 (601)
T ss_pred             cCccccccccccc
Confidence            9999999888766

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=90.17  E-value=1.5  Score=27.14  Aligned_cols=71  Identities=11%  Similarity=-0.067  Sum_probs=46.4

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCc--cceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRS--LVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~--i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +.+|.|..+.+|+..   +..+.+|..+...    ......+|...+..+..-.  +...+.+.... ...+++|++.|.
T Consensus         7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~   79 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---TGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK   79 (226)
T ss_pred             eeecCCCCcceeEec---CCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence            568999999999842   3356677766532    1123466777776664333  35667777666 677899999986


Q ss_pred             C
Q 044522          104 S  104 (113)
Q Consensus       104 ~  104 (113)
                      +
T Consensus        80 ~   80 (226)
T TIGR02172        80 R   80 (226)
T ss_pred             c
Confidence            3

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=87.90  E-value=4.5  Score=24.83  Aligned_cols=83  Identities=19%  Similarity=0.142  Sum_probs=48.2

Q ss_pred             ccccCCCceEEEEEeCCCcEEEEEEeeccc-----hhHH-HHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           28 TPRRGGFGAVYKGALRDGQVVAVKHHKVMS-----ACAQ-AAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~-----~~~~-~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+++|+=+.++.+.+. +..+.+|.-.+..     .+.. ......+|+.++..+..-.+....-+..++ ...|+|||+
T Consensus         3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            4667777778877553 3334444422211     1111 123456788888777544444333334455 788999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      +|..|.+.+..
T Consensus        82 ~G~~lkd~l~~   92 (204)
T COG3642          82 EGELLKDALEE   92 (204)
T ss_pred             CChhHHHHHHh
Confidence            98877766543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=87.24  E-value=4.9  Score=24.56  Aligned_cols=75  Identities=15%  Similarity=-0.020  Sum_probs=44.1

Q ss_pred             cCccccCCCceEEEEEeCC-------CcEEEEEEeeccchhHHH--------------------H----HHHHHHHHHHh
Q 044522           26 GKTPRRGGFGAVYKGALRD-------GQVVAVKHHKVMSACAQA--------------------A----FQFISEDEILS   74 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~-------~~~~~ik~~~~~~~~~~~--------------------~----~~~~~e~~~~~   74 (113)
                      ...||.|-=+.||.+...+       +..+|+|..+......+.                    .    .+..+|...|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3468888888999987432       367898877642210000                    0    11125777776


Q ss_pred             hCCC--CccceeeeEEEeceEEEEEecCCCC
Q 044522           75 CAQH--RSLVVLVGYCIEIVWLLVYGYPCNG  103 (113)
Q Consensus        75 ~~~h--~~i~~l~~~~~~~~~~lv~e~~~~g  103 (113)
                      .+..  -+++.++..   ..-+++|||+.+.
T Consensus        82 rl~~~Gv~vP~pi~~---~~~~lvME~Ig~~  109 (197)
T cd05146          82 RMQKAGIPCPEVVVL---KKHVLVMSFIGDD  109 (197)
T ss_pred             HHHHcCCCCCeEEEe---cCCEEEEEEcCCC
Confidence            6633  344455532   3567899999764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=86.46  E-value=5.3  Score=24.08  Aligned_cols=75  Identities=17%  Similarity=0.125  Sum_probs=47.8

Q ss_pred             ccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCC--ccceeeeEEEec----eEEEEEecCC
Q 044522           28 TPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR--SLVVLVGYCIEI----VWLLVYGYPC  101 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~--~i~~l~~~~~~~----~~~lv~e~~~  101 (113)
                      .++.|..+.+|.....+ ..+.+|.....    .....+..|..++..+...  .+.+++......    ..++++++++
T Consensus         4 ~l~~G~~n~~~~v~~~~-~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    4 PLSGGFSNRVYRVTTDD-GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEESSSSEEEEEEETT-SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             cCCCCCeeeEEEEEECC-cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            47788888999887655 58888886643    2334455666666655322  345555544332    5689999999


Q ss_pred             CCChhh
Q 044522          102 NGSLDH  107 (113)
Q Consensus       102 ~g~L~~  107 (113)
                      +..+..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            877665

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=86.04  E-value=8.8  Score=26.27  Aligned_cols=76  Identities=14%  Similarity=0.087  Sum_probs=46.0

Q ss_pred             CccccCCCceEEEEEeCCC-cEEEEEEeeccch-----hHHHHHHHHHHHHHHhhC---CCCccceeeeEEEec-eEEEE
Q 044522           27 KTPRRGGFGAVYKGALRDG-QVVAVKHHKVMSA-----CAQAAFQFISEDEILSCA---QHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~-~~~~ik~~~~~~~-----~~~~~~~~~~e~~~~~~~---~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      +.+|.|.+..||+....++ ..+.+|.-.+...     ..-.......|...+..+   ....++.++.+  +. ..+++
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            4589999999999887655 4788887542110     011223445566655554   22344555544  33 57799


Q ss_pred             EecCCCCC
Q 044522           97 YGYPCNGS  104 (113)
Q Consensus        97 ~e~~~~g~  104 (113)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998644

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=85.00  E-value=6.5  Score=23.82  Aligned_cols=67  Identities=21%  Similarity=0.070  Sum_probs=36.2

Q ss_pred             EEEEEeCCCcEEEEEEeeccchhHH------------------------HHHHHHHHHHHHhhCCCC--ccceeeeEEEe
Q 044522           37 VYKGALRDGQVVAVKHHKVMSACAQ------------------------AAFQFISEDEILSCAQHR--SLVVLVGYCIE   90 (113)
Q Consensus        37 v~~~~~~~~~~~~ik~~~~~~~~~~------------------------~~~~~~~e~~~~~~~~h~--~i~~l~~~~~~   90 (113)
                      ||.|...++..+++|..+......+                        ......+|...|..+...  +++.++.+   
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~---   78 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY---   78 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE---
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE---
Confidence            7777776777888887764311000                        112345688888888655  34555432   


Q ss_pred             ceEEEEEecCC--CCChh
Q 044522           91 IVWLLVYGYPC--NGSLD  106 (113)
Q Consensus        91 ~~~~lv~e~~~--~g~L~  106 (113)
                      ..-.++|||++  +..+.
T Consensus        79 ~~~~ivME~I~~~G~~~~   96 (188)
T PF01163_consen   79 NRNVIVMEYIGEDGVPLP   96 (188)
T ss_dssp             ETTEEEEE--EETTEEGG
T ss_pred             eCCEEEEEecCCCccchh
Confidence            24568999998  54443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=81.13  E-value=11  Score=23.47  Aligned_cols=83  Identities=10%  Similarity=0.058  Sum_probs=45.2

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccc-----hhHH-HHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMS-----ACAQ-AAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~-----~~~~-~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ...+.+|+-+.|+.+.+. |+...||.-....     .+.+ ..+...+|+..+..+.--.+.-..-+..+. .-.+.||
T Consensus        12 l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             ceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            345677888888888765 4555555432211     1111 223456777777655433333323333455 6778999


Q ss_pred             cCCCC-Chhhhc
Q 044522           99 YPCNG-SLDHNL  109 (113)
Q Consensus        99 ~~~~g-~L~~~l  109 (113)
                      |+++. ++.+++
T Consensus        91 ~~~g~~~vk~~i  102 (229)
T KOG3087|consen   91 FIDGASTVKDFI  102 (229)
T ss_pred             eccchhHHHHHH
Confidence            99862 344443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=81.04  E-value=0.25  Score=35.19  Aligned_cols=86  Identities=20%  Similarity=0.157  Sum_probs=49.1

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEee----ccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHK----VMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~----~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ....+|.|.+|.++..... .......+...    ...........+..|..+-..+.|+|++.......+. .....||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            4677889999855544321 11112222111    2211122223355666666778999987766666555 4444599


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++ +|+..+..
T Consensus       402 ~~~~-Dlf~~~~~  413 (601)
T KOG0590|consen  402 YCPY-DLFSLVMS  413 (601)
T ss_pred             cccH-HHHHHHhc
Confidence            9999 88877654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=80.90  E-value=11  Score=23.37  Aligned_cols=71  Identities=13%  Similarity=0.044  Sum_probs=42.5

Q ss_pred             cCCC-ceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecCCCCChhh
Q 044522           31 RGGF-GAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYPCNGSLDH  107 (113)
Q Consensus        31 ~g~~-~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~  107 (113)
                      .|.. ..||+.... +..+.+|......     ...+..|+.++..+. +--+.+++...... ..++++|+++|.++..
T Consensus         8 ~g~~~~~v~~~~~~-~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           8 EGQSGATVYRLDGK-NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             CCCCcCeEEEEcCC-CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            3444 567776543 3567777765431     223445666665552 23345666666555 6789999999877664

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	113
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-11
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-10
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-07
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-07
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		6e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		6e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		8e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           RGGFG VYKG L DG +VAVK  K          QF +E E++S A HR+L+ L G+C+ 
Sbjct: 40  RGGFGKVYKGRLADGXLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98
Query: 91  IVW-LLVYGYPCNGSL 105
               LLVY Y  NGS+
Sbjct: 99  PTERLLVYPYMANGSV 114

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           RGGFG VYKG L DG +VAVK  K          QF +E E++S A HR+L+ L G+C+ 
Sbjct: 48  RGGFGKVYKGRLADGTLVAVKRLK-EERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 106
Query: 91  IV-WLLVYGYPCNGSL 105
               LLVY Y  NGS+
Sbjct: 107 PTERLLVYPYMANGSV 122

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
           G FG VYKG LRDG  VA+K     S  +Q   +F +E E LS  +H  LV L+G+C E 
Sbjct: 50  GVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107
Query: 92  -VWLLVYGYPCNGSLDHNLCGPN 113
              +L+Y Y  NG+L  +L G +
Sbjct: 108 NEMILIYKYMENGNLKRHLYGSD 130

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
           G FG VYKG LRDG  VA+K     S  +Q   +F +E E LS  +H  LV L+G+C E 
Sbjct: 50  GVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107
Query: 92  -VWLLVYGYPCNGSLDHNLCGPN 113
              +L+Y Y  NG+L  +L G +
Sbjct: 108 NEMILIYKYMENGNLKRHLYGSD 130

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVVLVGYC 88
            GGFG VYKG + +   VAVK    M          QF  E ++++  QH +LV L+G+ 
Sbjct: 41  EGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 89  IEIVWL-LVYGYPCNGSL 105
            +   L LVY Y  NGSL
Sbjct: 100 SDGDDLCLVYVYMPNGSL 117

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVVLVGYC 88
            GGFG VYKG + +   VAVK    M          QF  E ++++  QH +LV L+G+ 
Sbjct: 41  EGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 89  IEIVWL-LVYGYPCNGSL 105
            +   L LVY Y  NGSL
Sbjct: 100 SDGDDLCLVYVYMPNGSL 117

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVVLVGYC 88
            GGFG VYKG + +   VAVK    M          QF  E ++++  QH +LV L+G+ 
Sbjct: 35  EGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 93
Query: 89  IEIVWL-LVYGYPCNGSL 105
            +   L LVY Y  NGSL
Sbjct: 94  SDGDDLCLVYVYMPNGSL 111

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 26  GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVV 83
           G     GGFG VYKG + +   VAVK    M          QF  E ++ +  QH +LV 
Sbjct: 27  GNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 84  LVGYCIEIVWL-LVYGYPCNGSL 105
           L+G+  +   L LVY Y  NGSL
Sbjct: 86  LLGFSSDGDDLCLVYVYXPNGSL 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	113
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-29
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-25
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-23
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-14
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	9e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-09
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-08
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	9e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	9e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	9e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	9e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  105 bits (265), Expect = 5e-29
 Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 4/85 (4%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAF-QFISEDEILSCAQHRSLVVLVGYCI 89
           RGGFG VYKG L DG +VAVK  K      Q    QF +E E++S A HR+L+ L G+C+
Sbjct: 40  RGGFGKVYKGRLADGTLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97

Query: 90  E-IVWLLVYGYPCNGSLDHNLCGPN 113
                LLVY Y  NGS+   L    
Sbjct: 98  TPTERLLVYPYMANGSVASCLRERP 122

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 96.1 bits (240), Expect = 2e-25
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G FG VYKG LRDG  VA+K     S  +Q   +F +E E LS  +H  LV L+G+C E
Sbjct: 49  HGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106

Query: 91  -IVWLLVYGYPCNGSLDHNLCGPN 113
               +L+Y Y  NG+L  +L G +
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSD 130

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 90.7 bits (226), Expect = 2e-23
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 16  SPCKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQ----FISEDE 71
            P  +  + +G     GGFG VYKG + +   VAVK  K+ +       +    F  E +
Sbjct: 30  RPISVGGNKMG----EGGFGVVYKGYV-NNTTVAVK--KLAAMVDITTEELKQQFDQEIK 82

Query: 72  ILSCAQHRSLVVLVGYCIE-IVWLLVYGYPCNGSLDHNLCGPN 113
           +++  QH +LV L+G+  +     LVY Y  NGSL   L   +
Sbjct: 83  VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 66.3 bits (162), Expect = 2e-14
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 9/84 (10%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           RG FG V+K  L   + VAVK   +     + ++Q   E   L   +H +++  +G    
Sbjct: 34  RGRFGCVWKAQLL-NEYVAVK---IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKR 89

Query: 91  -----IVWLLVYGYPCNGSLDHNL 109
                +   L+  +   GSL   L
Sbjct: 90  GTSVDVDLWLITAFHEKGSLSDFL 113

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 58.3 bits (141), Expect = 1e-11
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 14/87 (16%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEI--LSCAQHRSLVVLVGYC 88
           RG +GAVYKG+L   + VAV   KV S   +    FI+E  I  +   +H ++   +   
Sbjct: 23  RGRYGAVYKGSLD-ERPVAV---KVFSFANRQ--NFINEKNIYRVPLMEHDNIARFIVGD 76

Query: 89  IEIV------WLLVYGYPCNGSLDHNL 109
             +       +LLV  Y  NGSL   L
Sbjct: 77  ERVTADGRMEYLLVMEYYPNGSLXKYL 103

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 53.2 bits (128), Expect = 9e-10
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            L     +G FG V+ G       VA+K  K  +   +A   F+ E +++   +H  LV 
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 243

Query: 84  LVGYCIEIVWLLVYGYPCNGSLD 106
           L     E    +V  Y   GSL 
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLL 266

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 31  RGGFGAVYKGALRDGQVVAVK--HHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
            GGFG VY+     G  VAVK   H      +Q       E ++ +  +H +++ L G C
Sbjct: 17  IGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC 75

Query: 89  IEI-VWLLVYGYPCNGSLDHNL 109
           ++     LV  +   G L+  L
Sbjct: 76  LKEPNLCLVMEFARGGPLNRVL 97

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           RG FG V K   R  + VA+K  +  S        FI E   LS   H ++V L G C+ 
Sbjct: 18  RGAFGVVCKAKWR-AKDVAIKQIESESERKA----FIVELRQLSRVNHPNIVKLYGACLN 72

Query: 91  IVWLLVYGYPCNGSLDHNL 109
            V  LV  Y   GSL + L
Sbjct: 73  PVC-LVMEYAEGGSLYNVL 90

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G FG V++     G  VAVK        A+   +F+ E  I+   +H ++V+ +G   +
Sbjct: 47  AGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105

Query: 91  I-VWLLVYGYPCNGSLDHNL 109
                +V  Y   GSL   L
Sbjct: 106 PPNLSIVTEYLSRGSLYRLL 125

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 5/108 (4%)

Query: 4   VTKSPPMPPPLCSPCKIIAS--TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQ 61
              S P  P      +I      L K    G FG V+         VAVK  K     + 
Sbjct: 169 CMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSM 225

Query: 62  AAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNL 109
           +   F++E  ++   QH  LV L     +    ++  +   GSL   L
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL 273

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 51.8 bits (124), Expect = 3e-09
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            L     +G FG V+ G       VA+K  K  +   +A   F+ E +++   +H  LV 
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 326

Query: 84  LVGYCIEIVWLLVYGYPCNGSLD 106
           L     E    +V  Y   GSL 
Sbjct: 327 LYAVVSEEPIYIVTEYMSKGSLL 349

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 50.8 bits (122), Expect = 5e-09
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAF-----QFISEDEILSCAQHRSLVVL 84
           +GGFG V+KG L  D  VVA+K   +  +  +        +F  E  I+S   H ++V L
Sbjct: 29  KGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL 88

Query: 85  VGYCIEIVWLLVYGYPCNGSLDHNL 109
            G        +V  +   G L H L
Sbjct: 89  YGLMHNPPR-MVMEFVPCGDLYHRL 112

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 31  RGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
           +G FG   K   R+ G+V+ +K         Q    F+ E +++ C +H +++  +G   
Sbjct: 20  KGCFGQAIKVTHRETGEVMVMKELIRFDEETQR--TFLKEVKVMRCLEHPNVLKFIGVLY 77

Query: 90  -EIVWLLVYGYPCNGSLDHNL 109
            +     +  Y   G+L   +
Sbjct: 78  KDKRLNFITEYIKGGTLRGII 98

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 31 RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
              G ++KG  + G  + VK  KV     + +  F  E   L    H +++ ++G C  
Sbjct: 20 ENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS 78

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 47.6 bits (114), Expect = 7e-08
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 3/86 (3%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            L +    G FG V+ G       VAVK  K  S    A   F++E  ++   QH+ LV 
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVR 72

Query: 84  LVGYCIEIVWLLVYGYPCNGSLDHNL 109
           L     +    ++  Y  NGSL   L
Sbjct: 73  LYAVVTQEPIYIITEYMENGSLVDFL 98

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G FG V  G  R    VA+K  K  S        FI E +++    H  LV L G C +
Sbjct: 34  TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQLYGVCTK 90

Query: 91  IVWL-LVYGYPCNGSLDHNL 109
              + ++  Y  NG L + L
Sbjct: 91  QRPIFIITEYMANGCLLNYL 110

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 19  KIIASTLGKTPRRGGFGAVYKGALRDGQV---VAVKHHKVMSACAQAAFQFISEDEILSC 75
            +    LG     G FG V KG  +  +V   VAVK  K  +       + ++E  ++  
Sbjct: 19  TLEDKELG----SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 74

Query: 76  AQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNL 109
             +  +V ++G C    W+LV      G L+  L
Sbjct: 75  LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL 108

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           T  +    G FG V+ G   +   VA+K  +  +   +    FI E E++    H  LV 
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQ 67

Query: 84  LVGYCIEIV-WLLVYGYPCNGSLDHNL 109
           L G C+E     LV  +  +G L   L
Sbjct: 68  LYGVCLEQAPICLVTEFMEHGCLSDYL 94

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.5 bits (108), Expect = 4e-07
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI- 89
           +G +G V+ G  R G+ VAV   KV     +A++   +E       +H +++  +   I 
Sbjct: 47  KGRYGEVWMGKWR-GEKVAV---KVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102

Query: 90  ----EIVWLLVYGYPCNGSLDHNL 109
                    L+  Y  NGSL   L
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYL 126

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 45.4 bits (108), Expect = 5e-07
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 10/96 (10%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
            LGK    G FG+V +G L+        VAVK  K+ ++  +   +F+SE   +    H 
Sbjct: 37  ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96

Query: 80  SLVVLVGYCIE------IVWLLVYGYPCNGSLDHNL 109
           +++ L+G CIE         +++  +   G L   L
Sbjct: 97  NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 45.2 bits (107), Expect = 6e-07
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI- 89
           +G FG V++G  R G+ VAV   K+ S+  + ++   +E       +H +++  +     
Sbjct: 52  KGRFGEVWRGKWR-GEEVAV---KIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107

Query: 90  ----EIVWLLVYGYPCNGSLDHNL 109
                    LV  Y  +GSL   L
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYL 131

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 44.7 bits (106), Expect = 9e-07
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           +G FG VY G    G+V A++   +          F  E       +H ++V+ +G C+ 
Sbjct: 43  KGRFGQVYHGRWH-GEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 32  GGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI 91
           G FG VYKG    G V AVK   V +   Q    F +E  +L   +H ++++ +GY    
Sbjct: 35  GSFGTVYKGKWH-GDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP 92

Query: 92  VWLLVYGYPCNGSL 105
              +V  +    SL
Sbjct: 93  QLAIVTQWCEGSSL 106

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 8/95 (8%)

Query: 18  CKIIASTLGKTPRRGGFGAVYKGALR--DGQV-VAVKHHKVMSACAQAAFQFISEDEILS 74
             I    LG     G FG+V +G  R    Q+ VA+K  K          + + E +I+ 
Sbjct: 337 LLIADIELGC----GNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMH 391

Query: 75  CAQHRSLVVLVGYCIEIVWLLVYGYPCNGSLDHNL 109
              +  +V L+G C     +LV      G L   L
Sbjct: 392 QLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFL 426

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 28/91 (30%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           TL K    G FG V  G  +    VAVK  K  S        F  E + +    H  LV 
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE---FFQEAQTMMKLSHPKLVK 67

Query: 84  LVGYC-----IEIVWLLVYGYPCNGSLDHNL 109
             G C     I IV   +     NG L + L
Sbjct: 68  FYGVCSKEYPIYIVTEYI----SNGCLLNYL 94

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI- 89
           +G +G V++G+ + G+ VAV   K+ S+  + ++   +E       +H +++  +   + 
Sbjct: 18  KGRYGEVWRGSWQ-GENVAV---KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73

Query: 90  ----EIVWLLVYGYPCNGSL 105
                    L+  Y   GSL
Sbjct: 74  SRHSSTQLWLITHYHEMGSL 93

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 24 TLGKTPRRGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
          TLG+   +G FG+V +  L+        VAVK  K     +    +F+ E   +    H 
Sbjct: 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHP 85

Query: 80 SLVVLVGYCIE 90
           +  LVG  + 
Sbjct: 86 HVAKLVGVSLR 96

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQV-VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV 82
           T+      G +G VY+G  +   + VAVK  K  +   +    F+ E  ++   +H +LV
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLV 72

Query: 83  VLVGYCIE---IVWLLVYGYPCNGSLDHNL 109
            L+G C         ++  +   G+L   L
Sbjct: 73  QLLGVCTREPPF--YIITEFMTYGNLLDYL 100

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQV-VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV 82
           T+      G +G VY+G  +   + VAVK  K  +   +    F+ E  ++   +H +LV
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVMKEIKHPNLV 279

Query: 83  VLVGYCIEIV-WLLVYGYPCNGSLD 106
            L+G C     + ++  +   G+L 
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLL 304

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG-----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQH 78
              K    G FG VYKG            VA+K  +  +   +A  + + E  +++   +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE-ATSPKANKEILDEAYVMASVDN 76

Query: 79  RSLVVLVGYCIEIVWLLVYGYPCNGSLDHNL 109
             +  L+G C+     L+      G L   +
Sbjct: 77  PHVCRLLGICLTSTVQLITQLMPFGCLLDYV 107

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 42.9 bits (101), Expect = 4e-06
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
            LG+    G FG V++G           VA+K  K          +F+ E   +    H 
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEALTMRQFDHP 451

Query: 80  SLVVLVGYCIEIVWLLVYGYPCNGSLDHNL 109
            +V L+G   E    ++      G L   L
Sbjct: 452 HIVKLIGVITENPVWIIMELCTLGELRSFL 481

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 42.6 bits (101), Expect = 5e-06
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 31  RGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
           +G FG VY G   D        A+K         Q    F+ E  ++    H +++ L+G
Sbjct: 31  KGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIG 89

Query: 87  YCI--EIVWLLVYGYPCNGSLDHNL 109
             +  E +  ++  Y C+G L   +
Sbjct: 90  IMLPPEGLPHVLLPYMCHGDLLQFI 114

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 42.6 bits (101), Expect = 5e-06
 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 11/85 (12%)

Query: 31  RGGFGAVYKGALRDGQV-VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
           RG FG V+ G LR     VAVK  +  +       +F+ E  IL    H ++V L+G C 
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRE-TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT 182

Query: 90  E-----IVWLLVYGYPCNGSLDHNL 109
           +     IV  LV      G     L
Sbjct: 183 QKQPIYIVMELV----QGGDFLTFL 203

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 31  RGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
            G FG V            G+ VAVK  K  S     A     E EIL    H ++V   
Sbjct: 31  EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYK 89

Query: 86  GYCIEIV---WLLVYGYPCNGSLD 106
           G C E       L+  +  +GSL 
Sbjct: 90  GICTEDGGNGIKLIMEFLPSGSLK 113

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 41.8 bits (99), Expect = 9e-06
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 31  RGGFGAVYKGALRDGQV----VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
            G FG VY+G   + +     VAVK  K          +F+SE  I+    H  +V L+G
Sbjct: 22  EGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 80

Query: 87  YCIEIVWLLVYGYPCNGSLDHNL 109
              E    ++      G L H L
Sbjct: 81  IIEEEPTWIIMELYPYGELGHYL 103

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 31  RGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
            G FG V++G           VA+K  K          +F+ E   +    H  +V L+G
Sbjct: 25  EGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEALTMRQFDHPHIVKLIG 83

Query: 87  YCIEIVWLLVYGYPCNGSLDHNL 109
              E    ++      G L   L
Sbjct: 84  VITENPVWIIMELCTLGELRSFL 106

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 31  RGGFGAVYKGALR--DGQV-VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGY 87
            G FG+V +G  R    Q+ VA+K  K          + + E +I+    +  +V L+G 
Sbjct: 20  CGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMHQLDNPYIVRLIGV 78

Query: 88  CIEIVWLLVYGYPCNGSLDHNL 109
           C     +LV      G L   L
Sbjct: 79  CQAEALMLVMEMAGGGPLHKFL 100

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 32  GGFGAVYKGALRDGQ-----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
           G FG V+KG            V +K  +   +  Q+          +    H  +V L+G
Sbjct: 24  GVFGTVHKGVWIPEGESIKIPVCIKVIED-KSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82

Query: 87  YCIEIVWLLVYGYPCNGSLDHNL 109
            C      LV  Y   GSL  ++
Sbjct: 83  LCPGSSLQLVTQYLPLGSLLDHV 105

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
              +   RG FG VY G L D        AVK             QF++E  I+    H 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHP 86

Query: 80  SLVVLVGYCI--EIVWLLVYGYPCNGSLDHNL 109
           +++ L+G C+  E   L+V  Y  +G L + +
Sbjct: 87  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 7/90 (7%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
              +   RG FG VY G L D        AVK             QF++E  I+    H 
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHP 150

Query: 80  SLVVLVGYCI--EIVWLLVYGYPCNGSLDH 107
           +++ L+G C+  E   L+V  Y  +G L +
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG-----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQH 78
              K    G FG VYKG            VA+K  +  +   +A  + + E  +++   +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE-ATSPKANKEILDEAYVMASVDN 76

Query: 79  RSLVVLVGYCIEIVWLLVYGYPCNGSLDHNL 109
             +  L+G C+     L+      G L   +
Sbjct: 77  PHVCRLLGICLTSTVQLITQLMPFGCLLDYV 107

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 31  RGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQ-FISEDEILSCAQHRSLVVLV 85
            G FG V +G           VAVK  K        A   FI E   +    HR+L+ L 
Sbjct: 28  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87

Query: 86  GYCIEIVWLLVYGYPCNGSLDHNL 109
           G  +     +V      GSL   L
Sbjct: 88  GVVLTPPMKMVTELAPLGSLLDRL 111

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            L +T  +G FG V  G  R G  VAVK  K   A AQA   F++E  +++  +H +LV 
Sbjct: 24  KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQA---FLAEASVMTQLRHSNLVQ 78

Query: 84  LVGYCIE---IVWLLVYGYPCNGSLDHNL 109
           L+G  +E    ++ +V  Y   GSL   L
Sbjct: 79  LLGVIVEEKGGLY-IVTEYMAKGSLVDYL 106

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            L +T  +G FG V  G  R G  VAVK  K   A AQA   F++E  +++  +H +LV 
Sbjct: 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQA---FLAEASVMTQLRHSNLVQ 250

Query: 84  LVGYCIE---IVWLLVYGYPCNGSLD 106
           L+G  +E    ++ +V  Y   GSL 
Sbjct: 251 LLGVIVEEKGGLY-IVTEYMAKGSLV 275

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 13/94 (13%)

Query: 20  IIASTLGKTPRRGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAAFQFISEDEILS 74
                LG+    G FG V            G++VAVK  K   A  Q    +  E +IL 
Sbjct: 34  KKIRDLGE----GHFGKVSLYCYDPTNDGTGEMVAVKALKA-DAGPQHRSGWKQEIDILR 88

Query: 75  CAQHRSLVVLVGYCIEIV---WLLVYGYPCNGSL 105
              H  ++   G C +       LV  Y   GSL
Sbjct: 89  TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 14/90 (15%)

Query: 25  LGKTPRRGGFGAVYKGALR-----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
           LGK    G FG+V            G +VAVK  +      Q  FQ   E +IL      
Sbjct: 31  LGK----GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSD 84

Query: 80  SLVVLVGYCIEIV---WLLVYGYPCNGSLD 106
            +V   G           LV  Y  +G L 
Sbjct: 85  FIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 14/95 (14%)

Query: 20  IIASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILS 74
                LGK    G FG+V            G+VVAVK  +   +  +    F  E EIL 
Sbjct: 44  KFLQQLGK----GNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILK 97

Query: 75  CAQHRSLVVLVGYCIEIV---WLLVYGYPCNGSLD 106
             QH ++V   G C         L+  Y   GSL 
Sbjct: 98  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 14/95 (14%)

Query: 20  IIASTLGKTPRRGGFGAVYKGALR-----DGQVVAVKHHKVMSACAQAAFQFISEDEILS 74
                LGK    G FG+V            G+VVAVK  +   +  +    F  E EIL 
Sbjct: 13  KFLQQLGK----GNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILK 66

Query: 75  CAQHRSLVVLVGYCIEIV---WLLVYGYPCNGSLD 106
             QH ++V   G C         L+  Y   GSL 
Sbjct: 67  SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 13/94 (13%)

Query: 20  IIASTLGKTPRRGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEIL 73
           ++   LG+    G FG V+     +        +VAVK  K   A   A   F  E E+L
Sbjct: 44  VLKWELGE----GAFGKVFLAECHNLLPEQDKMLVAVKALK--EASESARQDFQREAELL 97

Query: 74  SCAQHRSLVVLVGYCIEIV-WLLVYGYPCNGSLD 106
           +  QH+ +V   G C E    L+V+ Y  +G L+
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 9/85 (10%)

Query: 32  GGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
           G FG V+     +        +VAVK  K  +  A+    F  E E+L+  QH  +V   
Sbjct: 26  GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK--DFQREAELLTNLQHEHIVKFY 83

Query: 86  GYCIEIV-WLLVYGYPCNGSLDHNL 109
           G C +    ++V+ Y  +G L+  L
Sbjct: 84  GVCGDGDPLIMVFEYMKHGDLNKFL 108

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           +G     GG   V++      Q+ A+K+  +  A  Q    + +E   L+  Q  S  +
Sbjct: 16 QIGS----GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 71

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 6/85 (7%)

Query: 7  SPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGA-LRDGQVVAVK---HHKVMSACAQA 62
          +  +P  L  P        G+   +GGF   ++ +     +V A K      ++      
Sbjct: 1  AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQ 58

Query: 63 AFQFISEDEILSCAQHRSLVVLVGY 87
            +   E  I     H+ +V   G+
Sbjct: 59 REKMSMEISIHRSLAHQHVVGFHGF 83

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 39.0 bits (91), Expect = 8e-05
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            +G     GG   V++      Q+ A+K+  +  A  Q    + +E   L+  Q  S  +
Sbjct: 63  QIGS----GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG---QVVAVKHHKVMSACAQAAFQFISEDEILS-CAQHR 79
                   G FG V K  ++        A+K  K   A       F  E E+L     H 
Sbjct: 28  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHP 86

Query: 80  SLVVLVGYC-IEIVWLLVYGYPCNGSLDHNL 109
           +++ L+G C       L   Y  +G+L   L
Sbjct: 87  NIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 32  GGFGAVYKGAL----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGY 87
           G FG V  G L    +    VA+K  KV     +    F+ E  I+    H +++ L G 
Sbjct: 56  GEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114

Query: 88  CIEIVWLL-VYGYPCNGSLDHNL 109
             +   ++ V  Y  NGSLD  L
Sbjct: 115 VTKSKPVMIVTEYMENGSLDSFL 137

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQ 77
           TL +    G FG VY+G +           VAVK         Q    F+ E  I+S   
Sbjct: 33  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFN 91

Query: 78  HRSLVVLVGYCIEIV-WLLVYGYPCNGSLD 106
           H+++V  +G  ++ +   ++      G L 
Sbjct: 92  HQNIVRCIGVSLQSLPRFILMELMAGGDLK 121

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (6%)

Query: 2   SNVTKSPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGA-LRDGQVVAVK---HHKVMS 57
           +    +  +P  L  P        G+   +GGF   ++ +     +V A K      ++ 
Sbjct: 22  AAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK 81

Query: 58  ACAQAAFQFISEDEILSCAQHRSLVVLVGY 87
                  +   E  I     H+ +V   G+
Sbjct: 82  --PHQREKMSMEISIHRSLAHQHVVGFHGF 109

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           +G     GG   V++      Q+ A+K+  +  A  Q    + +E   L+  Q  S  +
Sbjct: 35 QIGS----GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 90

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 24  TLGKTPRRGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQ 77
           TL +    G FG VY+G +           VAVK         Q    F+ E  I+S   
Sbjct: 74  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFN 132

Query: 78  HRSLVVLVGYCIEIV-WLLVYGYPCNGSLDHNL 109
           H+++V  +G  ++ +   ++      G L   L
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 31  RGGFGAVYKGALRDGQV-----VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
            G FG VYKG L+         VA+K  K      +    F+ E  I+    H +++ L 
Sbjct: 54  AGEFGEVYKGMLKTSSGKKEVPVAIKTLKA-GYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112

Query: 86  GYCIEIVWL-LVYGYPCNGSLDHNL 109
           G   +   + ++  Y  NG+LD  L
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFL 137

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 31  RGGFGAVYKGALRDG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
            G  G V  G LR        VA+K  K      +    F+SE  I+    H +++ L G
Sbjct: 59  SGDSGEVCYGRLRVPGQRDVPVAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEG 117

Query: 87  YCIEIVWLL-VYGYPCNGSLDHNL 109
                   + V  Y  NGSLD  L
Sbjct: 118 VVTRGRLAMIVTEYMENGSLDTFL 141

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 31 RGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
          RG F  VYKG        VA    +          +F  E E+L   QH ++V       
Sbjct: 36 RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWE 95

Query: 90 EIV 92
            V
Sbjct: 96 STV 98

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 7/75 (9%), Positives = 16/75 (21%), Gaps = 2/75 (2%)

Query: 24  TLGKTPRRGGFGAVYKGALRD-GQVVAVK-HHKVMSACAQAAFQFISEDEILSCAQHRSL 81
            L +  R G    V+     +  +  A+K              +        +     S 
Sbjct: 65  KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESP 124

Query: 82  VVLVGYCIEIVWLLV 96
                    ++    
Sbjct: 125 EEARDRRRLLLPSDA 139

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 24 TLGKTPRRGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQ 77
          T+ +   +G FG VY+G  +          VA+K     +A  +   +F++E  ++    
Sbjct: 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFN 86

Query: 78 HRSLVVLVGYC 88
             +V L+G  
Sbjct: 87 CHHVVRLLGVV 97

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 31  RGGFGAVYKGALRDGQV--------VAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV 82
           +G F  ++KG  R+           V +K      A    +  F     ++S   H+ LV
Sbjct: 18  QGTFTKIFKGVRREVGDYGQLHETEVLLKVLD--KAHRNYSESFFEAASMMSKLSHKHLV 75

Query: 83  VLVGYCIEIV-WLLVYGYPCNGSLDHNL 109
           +  G C+     +LV  +   GSLD  L
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYL 103

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 31  RGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL 84
              FG VYKG L         Q VA+K  K   A      +F  E  + +  QH ++V L
Sbjct: 19  EDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQHPNVVCL 77

Query: 85  VGYC-IEIVWLLVYGYPCNGSLD 106
           +G    +    +++ Y  +G L 
Sbjct: 78  LGVVTKDQPLSMIFSYCSHGDLH 100

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 31  RGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL 84
            G FG V++             +VAVK  K   A A     F  E  +++   + ++V L
Sbjct: 57  EGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADFQREAALMAEFDNPNIVKL 115

Query: 85  VGYCIEIV-WLLVYGYPCNGSLDHNL 109
           +G C       L++ Y   G L+  L
Sbjct: 116 LGVCAVGKPMCLLFEYMAYGDLNEFL 141

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 24 TLGKTPRRGGFGAVYKGALRDG------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQ 77
           LGKT   G FG V K              VAVK  K  +A        +SE  +L    
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVN 84

Query: 78 HRSLVVLVGYC 88
          H  ++ L G C
Sbjct: 85 HPHVIKLYGAC 95

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 31 RGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV 82
          +G +G VY G  L +   +A+K        ++ +     E  +    +H+++V
Sbjct: 32 KGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIV 82

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 36.4 bits (84), Expect = 8e-04
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 24  TLGKTPRRGGFGAVYKGAL------RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA- 76
            LGK   RG FG V +            + VAVK  K   A        +SE +IL    
Sbjct: 25  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIG 83

Query: 77  QHRSLVVLVGYCIEIV--WLLVYGYPCNGSLDHNL 109
            H ++V L+G C +     +++  +   G+L   L
Sbjct: 84  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	113
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.82
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.82
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.8
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.8
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.76
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.75
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.75
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.74
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.72
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.72
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.7
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.69
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.68
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.68
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.65
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.62
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.57
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.56
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.55
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.55
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.55
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.55
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.54
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.53
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.53
3uqc_A	286	Probable conserved transmembrane protein; structur	99.53
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.52
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.52
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.52
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.52
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.52
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.52
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.51
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.51
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.51
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.51
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.51
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.5
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.5
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.5
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.5
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.49
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.49
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.49
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.49
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.49
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.48
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.48
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.48
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.48
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.47
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.47
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.47
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.47
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.46
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.46
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.46
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.46
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.46
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.46
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.46
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.46
3niz_A	311	Rhodanese family protein; structural genomics, str	99.45
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.45
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.45
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.45
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.45
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.45
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.45
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.45
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.45
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.45
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.44
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.44
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.44
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.44
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.44
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.44
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.44
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.43
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.43
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.43
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.43
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.43
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.43
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.43
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.43
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.42
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.42
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.42
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.42
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.42
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.42
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.42
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.42
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.42
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.42
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.42
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.42
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.42
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.42
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.42
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.42
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.41
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.41
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.41
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.41
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.41
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.41
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.41
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.41
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.41
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.41
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.41
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.4
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.4
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.4
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.4
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.4
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.4
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.4
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.39
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.39
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.39
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.39
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.39
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.39
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.39
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.38
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.38
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.38
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.38
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.38
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.38
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.38
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.37
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.37
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.37
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.37
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.37
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.37
3bhy_A	283	Death-associated protein kinase 3; death associate	99.37
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.37
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.37
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.36
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.36
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.36
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.36
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.35
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.35
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.35
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.35
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.35
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.35
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.35
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.34
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.34
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.34
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.34
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.34
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.33
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.33
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.33
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.33
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.33
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.33
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.32
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.32
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.32
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.32
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.32
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.32
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.32
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.32
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.31
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.31
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.31
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.31
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.3
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.3
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.3
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.28
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.28
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.28
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.28
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.26
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.26
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.26
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.26
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.26
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.26
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.25
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.24
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.24
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.23
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.23
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.23
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.23
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.22
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.22
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.22
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.22
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.22
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.21
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.21
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.21
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.21
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.21
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.21
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.2
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.2
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.19
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.19
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.18
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.18
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.16
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.15
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.14
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.14
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.13
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.12
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.11
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.11
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.11
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.1
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.09
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.07
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.02
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.01
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.98
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.94
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.92
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.89
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.8
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.26
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.14
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.85
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.41
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.32
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.5
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.63
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.45
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	92.71
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.39
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	91.77
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	91.0
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	89.0
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.63
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	87.97

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.82  E-value=2.9e-20  Score=116.86  Aligned_cols=91  Identities=32%  Similarity=0.427  Sum_probs=76.1

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-   91 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-   91 (113)
                      +...+.+.+.||+|+||.||+|.+.      .+..+|+|.++...  ....+.|.+|+.+++.++|||++++++++.+. 
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            3345567899999999999999863      26679999998654  45667899999999999999999999999998 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++|+||+++|+|.++|++
T Consensus        89 ~~~lV~Ey~~~G~L~~~l~~  108 (299)
T 4asz_A           89 PLIMVFEYMKHGDLNKFLRA  108 (299)
T ss_dssp             SEEEEEECCTTCBHHHHHHH
T ss_pred             EEEEEEEcCCCCcHHHHHHh
Confidence            99999999999999998853

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.82  E-value=8.3e-20  Score=116.11  Aligned_cols=88  Identities=33%  Similarity=0.444  Sum_probs=76.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ...+.++||+|+||.||+|.+.      .+..||+|.++...  ....+.|.+|+.++..++||||+++++++.+. ..+
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3445688999999999999863      26789999998654  45667899999999999999999999999998 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +|+||+++|+|.+++++
T Consensus       120 lV~Ey~~~G~L~~~l~~  136 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRS  136 (329)
T ss_dssp             EEEECCTTCBHHHHHHT
T ss_pred             EEEEcCCCCcHHHHHHh
Confidence            99999999999998864

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.80  E-value=9.2e-20  Score=115.01  Aligned_cols=91  Identities=26%  Similarity=0.328  Sum_probs=75.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      .....+.++||+|+||.||+|.+.      .+..||+|.++.... ....+.|.+|+.++..++|||+++++|++... .
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  103 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP  103 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence            344567788999999999999862      356799999875431 23456799999999999999999999999988 9


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++|+||+++|+|.++|+.
T Consensus       104 ~~lV~Ey~~~G~L~~~L~~  122 (308)
T 4gt4_A          104 LSMIFSYCSHGDLHEFLVM  122 (308)
T ss_dssp             CEEEEECCSSCBHHHHHHT
T ss_pred             EEEEEEcCCCCcHHHHHHh
Confidence            9999999999999998854

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.80  E-value=2.8e-19  Score=114.38  Aligned_cols=90  Identities=17%  Similarity=0.133  Sum_probs=73.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..|.+.+.||+|+||.||++... .+..+|+|.++...........+.+|+.++..++||||+++++++.+. .+++|||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            35667889999999999999875 588999999986544355667799999999999999999999999999 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|.++|.
T Consensus       104 y~~gg~L~~~i~  115 (350)
T 4b9d_A          104 YCEGGDLFKRIN  115 (350)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             CCCCCcHHHHHH
Confidence            999999999885

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.78  E-value=8.4e-19  Score=110.54  Aligned_cols=87  Identities=28%  Similarity=0.348  Sum_probs=74.1

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCN  102 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~  102 (113)
                      ..+.+.||+|+||.||+|.+.  ..+|+|.++.........+.|.+|+.+++.++|||++++++++..+..++|+||+++
T Consensus        38 l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~g  115 (307)
T 3omv_A           38 VMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEG  115 (307)
T ss_dssp             CCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSS
T ss_pred             eEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCC
Confidence            346788999999999999864  358999987654335667789999999999999999999998866688999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|.++++.
T Consensus       116 GsL~~~l~~  124 (307)
T 3omv_A          116 SSLYKHLHV  124 (307)
T ss_dssp             CBHHHHHHT
T ss_pred             CCHHHHHhh
Confidence            999998864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.76  E-value=5.6e-18  Score=106.07  Aligned_cols=88  Identities=24%  Similarity=0.205  Sum_probs=74.4

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLLVY   97 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~lv~   97 (113)
                      .+.++||+|+||.||++.+. .+..+|+|.+............+.+|+.+++.++|||++++++++.+    . .+++||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            45678999999999999975 47889999997654334556779999999999999999999998865    2 589999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++|+|.+++.+
T Consensus       109 Ey~~gg~L~~~l~~  122 (290)
T 3fpq_A          109 ELMTSGTLKTYLKR  122 (290)
T ss_dssp             ECCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHh
Confidence            99999999998753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.75  E-value=1.2e-18  Score=109.97  Aligned_cols=91  Identities=18%  Similarity=0.095  Sum_probs=77.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+|+|.++.... .......+.+|+.++..++|||++++++++.+. .+++||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            34677899999999999999975 588999999975431 122345688999999999999999999999999 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++|+|.+++.+
T Consensus       112 Ey~~gG~L~~~i~~  125 (311)
T 4aw0_A          112 SYAKNGELLKYIRK  125 (311)
T ss_dssp             CCCTTEEHHHHHHH
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999998753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.75  E-value=1.1e-18  Score=111.52  Aligned_cols=87  Identities=21%  Similarity=0.177  Sum_probs=74.0

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.++||+|+||.||++... .+..+|+|.++...  ......+.+|+.+++.++|+||+++++++.+. .+++||||+
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            334577999999999999975 58899999997543  22334578999999999999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus       154 ~gg~L~~~l~~  164 (346)
T 4fih_A          154 EGGALTDIVTH  164 (346)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHHc
Confidence            99999988754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.74  E-value=2.3e-18  Score=112.45  Aligned_cols=87  Identities=21%  Similarity=0.177  Sum_probs=74.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.+....  ......+.+|+.+++.++|+||+++++++.+. .+++||||+
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            335678999999999999975 58899999997654  23334578999999999999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++..
T Consensus       231 ~gG~L~~~i~~  241 (423)
T 4fie_A          231 EGGALTDIVTH  241 (423)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHhc
Confidence            99999988753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.72  E-value=7.1e-17  Score=101.51  Aligned_cols=88  Identities=19%  Similarity=0.214  Sum_probs=71.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec----------
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI----------   91 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~----------   91 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++.... ......+.+|+.++..++|||++++++++...          
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            456688999999999999875 588999999876442 34456788999999999999999999988643          


Q ss_pred             ---eEEEEEecCCCCChhhhccC
Q 044522           92 ---VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ---~~~lv~e~~~~g~L~~~l~~  111 (113)
                         .++++|||+.+|+|.+++.+
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~  108 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNG  108 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHT
T ss_pred             CCcEEEEEEecCCCCcHHHHHHh
Confidence               37899999999999998865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.72  E-value=2e-17  Score=104.14  Aligned_cols=86  Identities=24%  Similarity=0.263  Sum_probs=68.3

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-----eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-----VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-----~~~lv   96 (113)
                      .+.+.+.||+|+||.||+|.+. +..||+|.++...   ........|+..+..++|+|++++++++...     ..++|
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            4567889999999999999874 7889999987543   2222233456666788999999999999754     47899


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+++|+|.+++++
T Consensus        80 ~Ey~~~gsL~~~l~~   94 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNR   94 (303)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             ecCCCCCcHHHHHHh
Confidence            999999999998864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.70  E-value=2.6e-17  Score=102.40  Aligned_cols=91  Identities=21%  Similarity=0.143  Sum_probs=70.3

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      +-.|.+.+.||+|+||.||++... .+..+|+|.++.... .......+.+|+.+++.++|||++++++++.+. ..++|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            345677899999999999999864 588999999976432 122345688999999999999999999999998 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      |||+ +|+|.+++.+
T Consensus        92 mEy~-~g~L~~~l~~  105 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQ  105 (275)
T ss_dssp             EECC-CEEHHHHHHH
T ss_pred             EeCC-CCCHHHHHHH
Confidence            9998 6788887753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.69  E-value=2.4e-16  Score=106.45  Aligned_cols=88  Identities=19%  Similarity=0.216  Sum_probs=77.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .|.+.+.||+|+||.||++... .+..+|+|.+....  ......+.+|+.+|..++|||++++++++.+. .++++|||
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            4567789999999999999975 58899999997655  34556788999999999999999999999999 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.++|.+
T Consensus       236 ~~gg~L~~~i~~  247 (573)
T 3uto_A          236 MSGGELFEKVAD  247 (573)
T ss_dssp             CCCCBHHHHHTC
T ss_pred             cCCCcHHHHHHH
Confidence            999999998754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.68  E-value=3.4e-17  Score=104.27  Aligned_cols=81  Identities=22%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      .+.++||+|+||.||++... .+..+|+|.++....       ..+|+.++..++||||+++++++.+. .+++||||++
T Consensus        61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  133 (336)
T 4g3f_A           61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE  133 (336)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            34577999999999999975 488999999986432       23688999999999999999999998 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|.++|.+
T Consensus       134 gg~L~~~l~~  143 (336)
T 4g3f_A          134 GGSLGQLIKQ  143 (336)
T ss_dssp             TCBHHHHHHH
T ss_pred             CCcHHHHHHH
Confidence            9999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.68  E-value=5e-17  Score=104.20  Aligned_cols=89  Identities=28%  Similarity=0.325  Sum_probs=73.0

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCC-CccceeeeEEEec--e
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH-RSLVVLVGYCIEI--V   92 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~i~~l~~~~~~~--~   92 (113)
                      .+.+.+.||+|+||.||+|.+..      +..+|+|.+..... ....+.+.+|+.++..+.| +||++++|+|...  .
T Consensus        65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~  143 (353)
T 4ase_A           65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  143 (353)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence            45567899999999999998532      34799999876542 3455679999999999965 8999999999765  7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      +++|+||+++|+|.++|++
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~  162 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRS  162 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHH
T ss_pred             EEEEEEcCCCCCHHHHHHh
Confidence            8999999999999998863

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.65  E-value=6.5e-18  Score=106.35  Aligned_cols=90  Identities=22%  Similarity=0.150  Sum_probs=69.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .+.+.+.||+|+||.||.+...    .+..+|+|.++...........+.+|+.++..++|||++++++++.+. ..++|
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            4677899999999999999752    367899999875432122223577899999999999999999999999 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      |||+++|+|.+++.+
T Consensus       105 mEy~~gg~L~~~l~~  119 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSK  119 (304)
T ss_dssp             ECCCTTCEEHHHHHH
T ss_pred             EEcCCCCCHHHHHHh
Confidence            999999999988753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.62  E-value=1.4e-15  Score=98.84  Aligned_cols=89  Identities=19%  Similarity=0.192  Sum_probs=72.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe------c-eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE------I-VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~------~-~~~   94 (113)
                      |.+.+.||+|+||.||++... .+..+|+|.++.........+.+.+|+.++..++|+|++++++++..      . .++
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~  135 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY  135 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence            445678999999999999975 58899999997654334556778899999999999999999998753      2 689


Q ss_pred             EEEecCCCCChhhhccCC
Q 044522           95 LVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~~  112 (113)
                      +||||+. |+|..++.+.
T Consensus       136 ivmE~~~-g~L~~~i~~~  152 (398)
T 4b99_A          136 VVLDLME-SDLHQIIHSS  152 (398)
T ss_dssp             EEEECCS-EEHHHHHTSS
T ss_pred             EEEeCCC-CCHHHHHHhc
Confidence            9999996 6788887653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.57  E-value=8e-15  Score=97.23  Aligned_cols=106  Identities=20%  Similarity=0.120  Sum_probs=80.3

Q ss_pred             CCCCCCCCCCCchhHHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccce
Q 044522            5 TKSPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV   83 (113)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~   83 (113)
                      +.+++.|++...-.-...|.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|+++
T Consensus         6 ~~~~~~~~~~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   85 (486)
T 3mwu_A            6 HHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK   85 (486)
T ss_dssp             --------CTTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCCCccccccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCe
Confidence            345555656655555566778899999999999999875 5789999998643211223456889999999999999999


Q ss_pred             eeeEEEec-eEEEEEecCCCCChhhhcc
Q 044522           84 LVGYCIEI-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        84 l~~~~~~~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      +++++... ..++++||+.+|+|.+.+.
T Consensus        86 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~  113 (486)
T 3mwu_A           86 LFEILEDSSSFYIVGELYTGGELFDEII  113 (486)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEEcCCEEEEEEEcCCCCcHHHHHH
Confidence            99999998 9999999999999987653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.56  E-value=3.4e-14  Score=91.24  Aligned_cols=91  Identities=20%  Similarity=0.187  Sum_probs=77.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++.+. ..++++|
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            34567889999999999999875 578999999976543345566788999999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|.+++..
T Consensus       109 ~~~gg~L~~~l~~  121 (362)
T 2bdw_A          109 LVTGGELFEDIVA  121 (362)
T ss_dssp             CCCSCBHHHHHTT
T ss_pred             cCCCCCHHHHHHH
Confidence            9999999887754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.55  E-value=3.9e-14  Score=88.90  Aligned_cols=89  Identities=19%  Similarity=0.322  Sum_probs=77.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   87 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE   87 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence            45567889999999999999875 47889999886544  56667899999999999999999999999998 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|.+++..
T Consensus        88 ~~~~~~L~~~l~~  100 (310)
T 3s95_A           88 YIKGGTLRGIIKS  100 (310)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             ecCCCcHHHHHHh
Confidence            9999999988753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.55  E-value=4e-14  Score=89.90  Aligned_cols=90  Identities=21%  Similarity=0.192  Sum_probs=77.6

Q ss_pred             HHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+.. ..+..+++|.+............+.+|+.++..++|+|++++++++... ..++|+|
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e   94 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME   94 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence            4566788999999999999987 4688999999976543345667788999999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+.+|+|.+++.
T Consensus        95 ~~~~~~L~~~l~  106 (328)
T 3fe3_A           95 YASGGEVFDYLV  106 (328)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             CCCCCcHHHHHH
Confidence            999999988764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.55  E-value=6.8e-14  Score=90.67  Aligned_cols=89  Identities=17%  Similarity=0.203  Sum_probs=76.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..+.|+|++++++++... ..++++|
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            34567788999999999999875 57889999988654  34445688999999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|.+++..
T Consensus       129 ~~~gg~L~~~l~~  141 (387)
T 1kob_A          129 FLSGGELFDRIAA  141 (387)
T ss_dssp             CCCCCBHHHHTTC
T ss_pred             cCCCCcHHHHHHh
Confidence            9999999988764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.55  E-value=3.1e-14  Score=89.66  Aligned_cols=90  Identities=24%  Similarity=0.289  Sum_probs=77.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||++.. .+..+++|.+............+.+|+.++..++|+|++++++++... ..++++||
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  115 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY  115 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred             hHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence            4556678899999999999976 467899999876544355667789999999999999999999999888 89999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++.+
T Consensus       116 ~~~~~L~~~l~~  127 (309)
T 3p86_A          116 LSRGSLYRLLHK  127 (309)
T ss_dssp             CTTCBHHHHHHS
T ss_pred             CCCCcHHHHHhh
Confidence            999999988764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.54  E-value=2.6e-14  Score=90.14  Aligned_cols=88  Identities=41%  Similarity=0.579  Sum_probs=75.9

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.+.||+|+||.||++....+..+++|.+....  ......+.+|+.++..++|+|++++++++... ..++++||+
T Consensus        40 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  117 (321)
T 2qkw_B           40 NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM  117 (321)
T ss_dssp             CCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred             ccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence            345578899999999999997778899999887654  34556788999999999999999999999888 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++.+
T Consensus       118 ~~~~L~~~l~~  128 (321)
T 2qkw_B          118 ENGNLKRHLYG  128 (321)
T ss_dssp             TTCBTGGGSSS
T ss_pred             CCCcHHHHHhc
Confidence            99999998864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.53  E-value=4.1e-14  Score=96.86  Aligned_cols=90  Identities=18%  Similarity=0.147  Sum_probs=69.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh----HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC----AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.++||+|+||.||.+... .+..+|+|.++.....    ......-..++.++..++||||+++++++.+. .+++
T Consensus       190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lyl  269 (689)
T 3v5w_A          190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF  269 (689)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred             HeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEE
Confidence            3445688999999999999975 5889999999753210    11112223335566778999999999999999 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ||||++||+|..+|.+
T Consensus       270 VmEy~~GGdL~~~l~~  285 (689)
T 3v5w_A          270 ILDLMNGGDLHYHLSQ  285 (689)
T ss_dssp             EECCCCSCBHHHHHHH
T ss_pred             EEecCCCCcHHHHHHh
Confidence            9999999999988753

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.53  E-value=2.5e-14  Score=92.17  Aligned_cols=90  Identities=29%  Similarity=0.371  Sum_probs=75.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ..+.+.+.||+|+||.||++...    .+..+++|.++.... ......+.+|+.++..++|+|++++++++... ..++
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            45567789999999999999853    356799999876432 44566789999999999999999999999888 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+++|+|.+++.+
T Consensus       124 v~e~~~~~sL~~~l~~  139 (373)
T 2qol_A          124 VTEYMENGSLDSFLRK  139 (373)
T ss_dssp             EEECCTTCBHHHHHHT
T ss_pred             EEeCCCCCcHHHHHHh
Confidence            9999999999998864

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.53  E-value=6.4e-14  Score=87.41  Aligned_cols=90  Identities=12%  Similarity=-0.081  Sum_probs=76.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .|.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+..+..+.|+|++++++++... ..++++|
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  111 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE  111 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence            4567789999999999999975 478899999976532 234556788999999999999999999999998 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+++|.+++.+
T Consensus       112 ~~~g~~L~~~l~~  124 (286)
T 3uqc_A          112 WIRGGSLQEVADT  124 (286)
T ss_dssp             CCCEEEHHHHHTT
T ss_pred             ecCCCCHHHHHhc
Confidence            9999999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.52  E-value=1.1e-13  Score=87.14  Aligned_cols=90  Identities=18%  Similarity=0.183  Sum_probs=73.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--------   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--------   91 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++...        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST-TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            34556788999999999999975 588999999875432 34556788999999999999999999987543        


Q ss_pred             --------------------------------------------------eEEEEEecCCCCChhhhccC
Q 044522           92 --------------------------------------------------VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~  111 (113)
                                                                        ..++++||+.+|+|.+++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  154 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR  154 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHT
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc
Confidence                                                              28999999999999988765

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.52  E-value=6.4e-14  Score=88.71  Aligned_cols=90  Identities=29%  Similarity=0.306  Sum_probs=75.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ..+.+.+.||+|+||.||.+.+.    .+..+++|.+..... ......+.+|+.++..++|+|++++++++... ..++
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            34556788999999999999863    244699999876432 45556789999999999999999999999888 8999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+.+|+|.+++..
T Consensus       128 v~e~~~~~~L~~~l~~  143 (325)
T 3kul_A          128 VTEYMENGSLDTFLRT  143 (325)
T ss_dssp             EEECCTTCBHHHHHHT
T ss_pred             EeeCCCCCcHHHHHHh
Confidence            9999999999998754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.52  E-value=5.2e-14  Score=90.62  Aligned_cols=89  Identities=27%  Similarity=0.399  Sum_probs=74.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC--------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR--------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-   91 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~--------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-   91 (113)
                      .+.+.+.||+|+||.||.+...        .+..+++|.++.... ......+.+|+.++..+ .|+|++++++++... 
T Consensus        82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            4456788999999999999752        244699999876532 45567789999999999 899999999999888 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+.+|+|.+++..
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~  180 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRA  180 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHH
T ss_pred             CEEEEEEcCCCCCHHHHHHh
Confidence            99999999999999988753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.52  E-value=3.2e-14  Score=88.16  Aligned_cols=91  Identities=30%  Similarity=0.326  Sum_probs=74.2

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      .....+.+.+.||+|+||.||.+.+..+..+++|.+.....   ....+.+|+.++..+.|+|++++++++... ..+++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence            34455667889999999999999887777899999986532   234578899999999999999999999888 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+.+++|.+++.+
T Consensus        98 ~e~~~~~~L~~~l~~  112 (283)
T 3gen_A           98 TEYMANGCLLNYLRE  112 (283)
T ss_dssp             ECCCTTCBHHHHHHC
T ss_pred             EeccCCCcHHHHHHH
Confidence            999999999988754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.52  E-value=7.1e-14  Score=92.01  Aligned_cols=90  Identities=19%  Similarity=0.158  Sum_probs=75.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..++++|
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            44567889999999999999864 578899999886554345566788999999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+.+|+|.+.+.
T Consensus        91 ~~~gg~L~~~i~  102 (444)
T 3soa_A           91 LVTGGELFEDIV  102 (444)
T ss_dssp             CCBCCBHHHHHH
T ss_pred             eCCCCCHHHHHH
Confidence            999999987764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=1.3e-13  Score=87.28  Aligned_cols=87  Identities=17%  Similarity=0.210  Sum_probs=74.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+....   .....+.+|+.++..++|+|++++++++.+. ..++++||
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            3456788999999999999875 47789999987543   3445678999999999999999999999998 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++..
T Consensus        83 ~~g~~L~~~l~~   94 (321)
T 1tki_A           83 ISGLDIFERINT   94 (321)
T ss_dssp             CCCCBHHHHHTS
T ss_pred             CCCCCHHHHHHh
Confidence            999999988764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.51  E-value=5.8e-14  Score=86.49  Aligned_cols=88  Identities=28%  Similarity=0.349  Sum_probs=75.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||++....+..+++|.+.....   ....+.+|+.++..++|+|++++++++... ..++++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            34566788999999999999987778899999886532   224588899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++..
T Consensus        87 ~~~~~L~~~l~~   98 (269)
T 4hcu_A           87 MEHGCLSDYLRT   98 (269)
T ss_dssp             CTTCBHHHHHHT
T ss_pred             CCCCcHHHHHHh
Confidence            999999988754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.51  E-value=3.1e-14  Score=91.57  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=69.9

Q ss_pred             hHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      |.+.+.||+|+||.||++..+    .+..+|+|.+....    ....+.+|+.++..+ +|+|++++++++.+. ..++|
T Consensus        23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            567789999999999999752    35679999886543    223567889888887 699999999999998 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+++|+|.+++.
T Consensus        99 mE~~~g~~L~~~~~  112 (361)
T 4f9c_A           99 MPYLEHESFLDILN  112 (361)
T ss_dssp             EECCCCCCHHHHHT
T ss_pred             EeCCCcccHHHHHc
Confidence            99999999998774

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.51  E-value=5e-14  Score=90.43  Aligned_cols=89  Identities=17%  Similarity=0.135  Sum_probs=75.1

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ....+.+.+.||+|+||.||.+... .+..+++|.+....   .....+.+|+..++.++|+|++++++++... ..+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            3445677899999999999999875 57889999987643   2224577899999999999999999999988 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+|+|..++.
T Consensus        95 ~e~~~~~~L~~~l~  108 (361)
T 3uc3_A           95 MEYASGGELYERIC  108 (361)
T ss_dssp             EECCCSCBHHHHHH
T ss_pred             EEeCCCCCHHHHHH
Confidence            99999999988764

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.51  E-value=5.2e-14  Score=88.07  Aligned_cols=89  Identities=19%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..+.|+|++++++.+... ..++++|
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            34556788999999999999864 57899999987543  22345578899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|.+++.+
T Consensus        98 ~~~~~~L~~~~~~  110 (297)
T 3fxz_A           98 YLAGGSLTDVVTE  110 (297)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             CCCCCCHHHHHhh
Confidence            9999999987653

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.51  E-value=1.2e-13  Score=88.99  Aligned_cols=83  Identities=22%  Similarity=0.185  Sum_probs=67.8

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      .+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+|++++++++... ..++|+||+++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            467999999999999864 58899999998765  35566788999999999999999999999988 999999999999


Q ss_pred             Chhhhcc
Q 044522          104 SLDHNLC  110 (113)
Q Consensus       104 ~L~~~l~  110 (113)
                      +|.+++.
T Consensus       172 ~L~~~l~  178 (373)
T 2x4f_A          172 ELFDRII  178 (373)
T ss_dssp             EEHHHHH
T ss_pred             cHHHHHH
Confidence            9987664

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.50  E-value=1.5e-13  Score=88.73  Aligned_cols=91  Identities=15%  Similarity=0.139  Sum_probs=78.4

Q ss_pred             HHHhHhcCccccC--CCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           20 IIASTLGKTPRRG--GFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        20 ~~~~~~~~~lg~g--~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ...+.+.+.||+|  +||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3456778999999  99999999975 588999999986543345566788899999999999999999999998 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      |+||+.+|+|.+++.
T Consensus       104 v~e~~~~~~L~~~l~  118 (389)
T 3gni_B          104 VTSFMAYGSAKDLIC  118 (389)
T ss_dssp             EEECCTTCBHHHHHH
T ss_pred             EEEccCCCCHHHHHh
Confidence            999999999998875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.50  E-value=3e-14  Score=94.83  Aligned_cols=90  Identities=24%  Similarity=0.384  Sum_probs=76.8

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ....+.+.+.||+|+||.||+|.+.. +..+++|.+....   .....+.+|+.++..++|+|++++++++... ..++|
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            34455677899999999999999764 7889999987653   2345688999999999999999999999988 99999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+.+|+|.+++++
T Consensus       295 ~E~~~~g~L~~~l~~  309 (495)
T 1opk_A          295 TEFMTYGNLLDYLRE  309 (495)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EEccCCCCHHHHHHh
Confidence            999999999998753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.50  E-value=4e-14  Score=93.26  Aligned_cols=89  Identities=26%  Similarity=0.271  Sum_probs=75.8

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEec
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY   99 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~   99 (113)
                      ...+.+.+.||+|+||.||++.+..+..+++|.++...   .....+.+|+.++..++|+|++++++++.....++++||
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~  263 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF  263 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEee
Confidence            34556778999999999999998777889999998653   234578899999999999999999999875588999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++++
T Consensus       264 ~~~g~L~~~l~~  275 (454)
T 1qcf_A          264 MAKGSLLDFLKS  275 (454)
T ss_dssp             CTTCBHHHHHHS
T ss_pred             cCCCcHHHHHHh
Confidence            999999998764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.50  E-value=3e-14  Score=91.84  Aligned_cols=89  Identities=30%  Similarity=0.446  Sum_probs=75.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++.+. .+..+++|.++.... ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            34556788999999999999975 578899999875431 34455688999999999999999999999888 8999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|.++++
T Consensus       193 ~~~~g~L~~~l~  204 (377)
T 3cbl_A          193 LVQGGDFLTFLR  204 (377)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             cCCCCCHHHHHH
Confidence            999999998875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.49  E-value=9.8e-14  Score=89.19  Aligned_cols=90  Identities=21%  Similarity=0.148  Sum_probs=75.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH----HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA----QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+.......    .....+.+|+.++..+.|+|++++++++... ..++
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   92 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL   92 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence            3567889999999999999875 58899999987643211    1235688999999999999999999999988 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+.+|+|.+++.+
T Consensus        93 v~e~~~gg~L~~~l~~  108 (361)
T 2yab_A           93 ILELVSGGELFDFLAQ  108 (361)
T ss_dssp             EEECCCSCBHHHHHTT
T ss_pred             EEEcCCCCcHHHHHHh
Confidence            9999999999998764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.49  E-value=1.3e-13  Score=87.32  Aligned_cols=90  Identities=23%  Similarity=0.184  Sum_probs=73.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..++++||
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            4556788999999999999875 578899999875432 23345678899999999999999999999988 99999999


Q ss_pred             CCCCChhhhccCC
Q 044522          100 PCNGSLDHNLCGP  112 (113)
Q Consensus       100 ~~~g~L~~~l~~~  112 (113)
                      +.+|+|.+++...
T Consensus        87 ~~~~~L~~~l~~~   99 (323)
T 3tki_A           87 CSGGELFDRIEPD   99 (323)
T ss_dssp             CTTEEGGGGSBTT
T ss_pred             CCCCcHHHHHhhc
Confidence            9999999888653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.49  E-value=4.4e-14  Score=86.80  Aligned_cols=92  Identities=21%  Similarity=0.191  Sum_probs=77.4

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLV   96 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv   96 (113)
                      ...+.+.+.||+|+||.||++.+. +..+++|.+............+.+|+.++..++|+|++++++++...   ..+++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            345667889999999999999875 77899999886543355667789999999999999999999998764   67999


Q ss_pred             EecCCCCChhhhccCC
Q 044522           97 YGYPCNGSLDHNLCGP  112 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~~  112 (113)
                      +||+++|+|.+++.+.
T Consensus        88 ~e~~~~~~L~~~l~~~  103 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEG  103 (271)
T ss_dssp             EECCTTCBHHHHHHSC
T ss_pred             ecccCCCcHHHHHhhc
Confidence            9999999999988653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.49  E-value=1.1e-13  Score=86.03  Aligned_cols=89  Identities=17%  Similarity=0.127  Sum_probs=74.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            45667899999999999999864 578899999876431 22345688899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+.+|+|.+++.
T Consensus       101 ~~~~~~L~~~l~  112 (285)
T 3is5_A          101 TCEGGELLERIV  112 (285)
T ss_dssp             CCSCCBHHHHHH
T ss_pred             eCCCCcHHHHHH
Confidence            999999988763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.48  E-value=2.1e-13  Score=86.21  Aligned_cols=85  Identities=19%  Similarity=0.128  Sum_probs=73.1

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ..+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..++|+|++++++.+... ..++++||+++
T Consensus        49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            3467999999999999875 58899999987654  23345678999999999999999999999988 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++.+
T Consensus       127 ~~L~~~l~~  135 (321)
T 2c30_A          127 GALTDIVSQ  135 (321)
T ss_dssp             CBHHHHHTT
T ss_pred             CCHHHHHHh
Confidence            999988764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.48  E-value=1.4e-13  Score=88.84  Aligned_cols=91  Identities=26%  Similarity=0.347  Sum_probs=75.4

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC--------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR--------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE   90 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~   90 (113)
                      ...+.+.+.||+|+||.||++...        .+..+++|.+..... ......+.+|+.++..+ .|+|++++++++..
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            345567889999999999999852        134799999876532 45567788999999999 89999999999998


Q ss_pred             c-eEEEEEecCCCCChhhhccC
Q 044522           91 I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      . ..++++||+.+|+|.+++..
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~  168 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQA  168 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHH
T ss_pred             CCceEEEEEecCCCcHHHHHHH
Confidence            8 99999999999999988753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.48  E-value=7.8e-14  Score=91.86  Aligned_cols=88  Identities=26%  Similarity=0.279  Sum_probs=74.8

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEec
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY   99 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~   99 (113)
                      ...+.+.+.||+|+||.||++.+..+..+++|.++....   ....+.+|+.++..++|+|++++++++.....++++||
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~  259 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  259 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehh
Confidence            344567788999999999999987777899999986532   23568899999999999999999999876688999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +.+|+|.+++.
T Consensus       260 ~~~gsL~~~l~  270 (452)
T 1fmk_A          260 MSKGSLLDFLK  270 (452)
T ss_dssp             CTTCBHHHHHS
T ss_pred             hcCCCHHHHHH
Confidence            99999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.48  E-value=7.4e-14  Score=90.45  Aligned_cols=94  Identities=17%  Similarity=0.099  Sum_probs=77.5

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .....+.+.+.||+|+||.||.+... .+..+|+|.+..... .......+.+|+.++..++|+|++++++++.+. ..+
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   91 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMF   91 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            34456677899999999999999875 478899999875321 112345678899999999999999999999998 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+|+|..++.+
T Consensus        92 lv~e~~~gg~L~~~l~~  108 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQ  108 (384)
T ss_dssp             EEECCCTTEEHHHHHHT
T ss_pred             EEEecCCCCcHHHHHHh
Confidence            99999999999888764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.47  E-value=1.5e-13  Score=87.90  Aligned_cols=90  Identities=20%  Similarity=0.191  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh---HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC---AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+......   ......+.+|+.++..++|+|++++++++... ..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            45667889999999999999875 5889999998743210   01245688999999999999999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ++||+.+|+|.+++.
T Consensus       104 v~e~~~g~~L~~~l~  118 (351)
T 3c0i_A          104 VFEFMDGADLCFEIV  118 (351)
T ss_dssp             EEECCSSCBHHHHHH
T ss_pred             EEeCCCCCCHHHHHH
Confidence            999999999976653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.47  E-value=3e-13  Score=85.63  Aligned_cols=91  Identities=21%  Similarity=0.123  Sum_probs=75.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH----HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA----QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.......    .....+.+|+.++..++|+|++++++++... ..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            34567889999999999999875 47889999987643111    1245688999999999999999999999988 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+|+|.+++.+
T Consensus        91 lv~e~~~~~~L~~~l~~  107 (326)
T 2y0a_A           91 LILELVAGGELFDFLAE  107 (326)
T ss_dssp             EEEECCCSCBHHHHHTT
T ss_pred             EEEEcCCCCCHHHHHHh
Confidence            99999999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.47  E-value=1.7e-13  Score=85.36  Aligned_cols=89  Identities=29%  Similarity=0.332  Sum_probs=74.9

Q ss_pred             HHhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---e
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~   92 (113)
                      ..+.+.+.||+|+||.||.+.+     ..+..+++|.+....  ......+.+|+.++..++|+|++++++++...   .
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence            4556788999999999999974     247789999988654  45667789999999999999999999998654   5


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|.+++.+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~  106 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQK  106 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHH
T ss_pred             eEEEEEeCCCCCHHHHHHh
Confidence            8999999999999988753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.47  E-value=7.7e-14  Score=93.64  Aligned_cols=88  Identities=26%  Similarity=0.279  Sum_probs=74.9

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEec
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY   99 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~   99 (113)
                      ...+.+.+.||+|+||.||++.+..+..+++|.++....   ....+.+|+.++..++|+|++++++++.....++|+||
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~  342 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  342 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeeh
Confidence            344567788999999999999987777899999986532   23568899999999999999999999876688999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +.+|+|.+++.
T Consensus       343 ~~~gsL~~~l~  353 (535)
T 2h8h_A          343 MSKGSLLDFLK  353 (535)
T ss_dssp             CTTEEHHHHHS
T ss_pred             hcCCcHHHHHh
Confidence            99999999875

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.46  E-value=2e-13  Score=86.64  Aligned_cols=92  Identities=16%  Similarity=0.058  Sum_probs=76.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ....+.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++++.+. ..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            4455667899999999999999875 477899999875421 234556788999999999999999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ++||+.+++|.+++.
T Consensus       119 v~e~~~~~~L~~~~~  133 (335)
T 2owb_A          119 VLELCRRRSLLELHK  133 (335)
T ss_dssp             EECCCTTCBHHHHHH
T ss_pred             EEecCCCCCHHHHHh
Confidence            999999999988764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.46  E-value=6.1e-13  Score=82.25  Aligned_cols=90  Identities=24%  Similarity=0.211  Sum_probs=75.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.+|+..+..+ .|+|++++++++... ..++++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            34556788999999999999975 588999999886433244556778888888888 899999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+++++|.+++.
T Consensus        91 e~~~~~~L~~~l~  103 (289)
T 1x8b_A           91 EYCNGGSLADAIS  103 (289)
T ss_dssp             ECCTTCBHHHHHH
T ss_pred             EecCCCcHHHHHH
Confidence            9999999998875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.46  E-value=3.7e-13  Score=85.44  Aligned_cols=91  Identities=15%  Similarity=0.095  Sum_probs=75.6

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch---hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA---CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ...+.+.+.||+|+||.||.+... .+..+++|.+.....   .......+.+|+.++..++|+|++++++++... ..+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            345667899999999999999874 577899999875321   123456788999999999999999999999988 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +|+||+++|+|.+++.
T Consensus       105 lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          105 LVMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEEECCCSCBHHHHEE
T ss_pred             EEEeCCCCCcHHHHHH
Confidence            9999999999998874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.46  E-value=4.8e-13  Score=84.73  Aligned_cols=81  Identities=21%  Similarity=0.127  Sum_probs=68.9

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ++.||+|+||.||++... .+..+++|.+...     ....+.+|+..+..+. |+|++++++++.+. ..++++||+.+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~   90 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG   90 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence            477999999999999975 5788999998743     2345667888888886 99999999999998 99999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|.+++.+
T Consensus        91 ~~L~~~l~~   99 (325)
T 3kn6_A           91 GELFERIKK   99 (325)
T ss_dssp             CBHHHHHHH
T ss_pred             CcHHHHHHh
Confidence            999887753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.46  E-value=2.2e-13  Score=87.57  Aligned_cols=88  Identities=26%  Similarity=0.374  Sum_probs=73.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||++.+.      .+..+++|.++.... ......+.+|+.++..++|+|++++++++... ..+
T Consensus        72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            4456788999999999999842      356799999875432 45556788999999999999999999999888 899


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +|+||+.+|+|.+++.
T Consensus       151 lv~e~~~~g~L~~~l~  166 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLR  166 (367)
T ss_dssp             EEEECCTTEEHHHHHH
T ss_pred             EEEEeCCCCCHHHHHH
Confidence            9999999999998875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.46  E-value=2.6e-13  Score=86.02  Aligned_cols=89  Identities=24%  Similarity=0.320  Sum_probs=74.6

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||++....      +..+++|.+..... ......+.+|+.++..++|+|++++++++... ..+
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  126 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC  126 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence            34456889999999999998642      36799999876432 34556789999999999999999999999888 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+|+|.+++.+
T Consensus       127 lv~e~~~~~~L~~~l~~  143 (343)
T 1luf_A          127 LLFEYMAYGDLNEFLRS  143 (343)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEecCCCCcHHHHHHH
Confidence            99999999999998753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.46  E-value=1.5e-13  Score=84.57  Aligned_cols=88  Identities=31%  Similarity=0.288  Sum_probs=74.8

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ...+.+.+.||+|+||.||.+....+..+++|.+.....   ....+.+|+..+..+.|+|++++++++... ..++++|
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            345567788999999999999887777899999876532   234578899999999999999999999888 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|.+++.
T Consensus        84 ~~~~~~L~~~l~   95 (268)
T 3sxs_A           84 YISNGCLLNYLR   95 (268)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             ccCCCcHHHHHH
Confidence            999999988764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.46  E-value=2.3e-13  Score=85.29  Aligned_cols=91  Identities=31%  Similarity=0.318  Sum_probs=76.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ...+.+.+.||+|+||.||++...      .+..+++|.+..... ......+.+|+.++..++|+|++++++++... .
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            345567889999999999999751      246799999876432 45567788999999999999999999999888 9


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+.+|+|.+++.+
T Consensus       101 ~~lv~e~~~~~~L~~~l~~  119 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRE  119 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHH
T ss_pred             eEEEEeecCCCCHHHHHHH
Confidence            9999999999999988753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.45  E-value=2.5e-13  Score=85.51  Aligned_cols=89  Identities=21%  Similarity=0.237  Sum_probs=71.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||++....+..+++|.+............+.+|+.++..++|+|++++++++.+. ..++++||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            34556788999999999999987788999999875432223346688999999999999999999999988 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +.+ +|..++.
T Consensus       101 ~~~-~l~~~~~  110 (311)
T 3niz_A          101 MEK-DLKKVLD  110 (311)
T ss_dssp             CSE-EHHHHHH
T ss_pred             CCC-CHHHHHH
Confidence            985 6766554

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.45  E-value=2.2e-13  Score=90.51  Aligned_cols=89  Identities=17%  Similarity=0.171  Sum_probs=69.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..++|+||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  117 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC  117 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            4566789999999999999875 578899999876432122345688999999999999999999999998 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +.+|+|.+.+.
T Consensus       118 ~~~g~L~~~~~  128 (494)
T 3lij_A          118 YKGGELFDEII  128 (494)
T ss_dssp             CCSCBHHHHHH
T ss_pred             CCCCcHHHHHH
Confidence            99999987653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.45  E-value=5.4e-13  Score=83.33  Aligned_cols=89  Identities=19%  Similarity=0.147  Sum_probs=74.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+.... ........+.+|+..+..++|+|++++++++... ..++++|
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   91 (294)
T 4eqm_A           12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME   91 (294)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence            3456788999999999999864 57889999986532 1245567788999999999999999999999888 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|.+++.
T Consensus        92 ~~~g~~L~~~l~  103 (294)
T 4eqm_A           92 YIEGPTLSEYIE  103 (294)
T ss_dssp             CCCSCBHHHHHH
T ss_pred             CCCCCCHHHHHH
Confidence            999999998764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.45  E-value=3.5e-13  Score=85.13  Aligned_cols=89  Identities=25%  Similarity=0.290  Sum_probs=73.0

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-----eE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-----VW   93 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-----~~   93 (113)
                      ....+.+.+.||+|+||.||++.+. +..+|+|.+....   ........|+..+..++|+|++++++++...     ..
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence            4455677899999999999999875 6889999987543   3344456688889999999999999999874     37


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++|+|.+++.+
T Consensus        98 ~lv~e~~~~g~L~~~l~~  115 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKA  115 (322)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999988754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.45  E-value=6.6e-13  Score=82.23  Aligned_cols=89  Identities=20%  Similarity=0.203  Sum_probs=75.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..++++||
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   86 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL   86 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence            3456788999999999999875 478899999876543345567788999999999999999999999988 89999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +.+++|.+.+.
T Consensus        87 ~~~~~l~~~~~   97 (284)
T 3kk8_A           87 VTGGELFEDIV   97 (284)
T ss_dssp             CCSCBHHHHHH
T ss_pred             CCCCCHHHHHH
Confidence            99999877653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.45  E-value=1.3e-12  Score=80.58  Aligned_cols=91  Identities=23%  Similarity=0.186  Sum_probs=76.7

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..++++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            345667889999999999999875 578899999875432 23456688899999999999999999999988 899999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+++|.+++.+
T Consensus        85 e~~~~~~L~~~l~~   98 (276)
T 2yex_A           85 EYCSGGELFDRIEP   98 (276)
T ss_dssp             ECCTTEEGGGGSBT
T ss_pred             EecCCCcHHHHHhh
Confidence            99999999988764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.45  E-value=6.1e-14  Score=88.50  Aligned_cols=89  Identities=43%  Similarity=0.622  Sum_probs=72.4

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.+.||+|+||.||++....+..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..++++||+
T Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  109 (326)
T 3uim_A           31 NFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM  109 (326)
T ss_dssp             SSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECC
T ss_pred             ccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEec
Confidence            3445688999999999999876788899999875431 11223578899999999999999999999988 899999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++.+
T Consensus       110 ~~~~L~~~l~~  120 (326)
T 3uim_A          110 ANGSVASCLRE  120 (326)
T ss_dssp             TTCBHHHHHHC
T ss_pred             cCCCHHHHHHh
Confidence            99999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.45  E-value=3.9e-13  Score=84.72  Aligned_cols=89  Identities=22%  Similarity=0.228  Sum_probs=73.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~   97 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++...   ..++++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            3556788999999999999975 478999999875432 23345677899999999999999999988764   679999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+++|.+++..
T Consensus        89 e~~~~~~L~~~l~~  102 (319)
T 4euu_A           89 EFCPCGSLYTVLEE  102 (319)
T ss_dssp             ECCTTCBHHHHHHS
T ss_pred             eCCCCCCHHHHHHH
Confidence            99999999988764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.45  E-value=3.9e-13  Score=85.24  Aligned_cols=91  Identities=26%  Similarity=0.377  Sum_probs=75.4

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC--------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR--------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE   90 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~   90 (113)
                      ...+.+.+.||+|+||.||++...        .+..+++|.+..... ......+.+|+.++..+ .|+|++++++++..
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            345667899999999999999852        356799999876432 45566788999999998 89999999999988


Q ss_pred             c-eEEEEEecCCCCChhhhccC
Q 044522           91 I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      . ..++++||+.+|+|.+++..
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~  134 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRA  134 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHT
T ss_pred             CCceEEEEECCCCCcHHHHHHH
Confidence            8 99999999999999998764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.44  E-value=5.9e-13  Score=82.25  Aligned_cols=90  Identities=20%  Similarity=0.201  Sum_probs=75.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--c-eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--I-VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--~-~~~lv   96 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++..  . ..+++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            45567788999999999999875 57889999997654334556678899999999999999999998764  3 79999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+++++|.+++.
T Consensus        86 ~e~~~~~~L~~~l~   99 (279)
T 2w5a_A           86 MEYCEGGDLASVIT   99 (279)
T ss_dssp             EECCTTEEHHHHHH
T ss_pred             EeCCCCCCHHHHHH
Confidence            99999999988764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.44  E-value=1.5e-13  Score=85.36  Aligned_cols=89  Identities=25%  Similarity=0.326  Sum_probs=74.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC-C-------cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD-G-------QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~-~-------~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-   91 (113)
                      ..+.+.+.||+|+||.||++.... +       ..+++|.+....  ......+.+|+.++..++|+|++++++++... 
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            455678889999999999998532 2       468999987544  34456788999999999999999999999988 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+.+|+|.+++.+
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~  105 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKK  105 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHH
T ss_pred             CCEEEEECCCCCCHHHHHHh
Confidence            89999999999999988753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.44  E-value=1.4e-13  Score=87.84  Aligned_cols=91  Identities=27%  Similarity=0.309  Sum_probs=75.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--   91 (113)
                      ..+.+.+.||+|+||.||++.+.      .+..+++|.++.... ......+.+|+.++..+ .|+|++++++++...  
T Consensus        22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            45567889999999999999741      256899999976432 34556789999999999 789999999999876  


Q ss_pred             eEEEEEecCCCCChhhhccCC
Q 044522           92 VWLLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~~  112 (113)
                      ..++++||+.+|+|.+++...
T Consensus       101 ~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             CCEEEEECCTTEEHHHHHHTT
T ss_pred             ceEEEEEecCCCcHHHHHHhc
Confidence            599999999999999988653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.44  E-value=4.8e-13  Score=91.10  Aligned_cols=83  Identities=27%  Similarity=0.372  Sum_probs=70.0

Q ss_pred             ccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCCC
Q 044522           28 TPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNGS  104 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g~  104 (113)
                      .||+|+||.||+|.+.   .+..+++|.++.... ......+.+|+.++..++|+|++++++++.....++|+||+.+|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCc
Confidence            6999999999999863   355799999876431 234567889999999999999999999987668899999999999


Q ss_pred             hhhhccC
Q 044522          105 LDHNLCG  111 (113)
Q Consensus       105 L~~~l~~  111 (113)
                      |.+++.+
T Consensus       422 L~~~l~~  428 (613)
T 2ozo_A          422 LHKFLVG  428 (613)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhh
Confidence            9998754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.44  E-value=3.4e-13  Score=89.47  Aligned_cols=93  Identities=26%  Similarity=0.241  Sum_probs=77.2

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ....+.+.+.||+|+||.||.+... .+..+++|.+...... ......+.+|+.++..++|+|++++++++... ..++
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3445677899999999999999875 5889999998754210 11245688999999999999999999999988 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+.+|+|.+++.+
T Consensus        94 v~E~~~gg~L~~~l~~  109 (476)
T 2y94_A           94 VMEYVSGGELFDYICK  109 (476)
T ss_dssp             EEECCSSEEHHHHTTS
T ss_pred             EEeCCCCCcHHHHHHh
Confidence            9999999999998764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.44  E-value=1.1e-12  Score=81.48  Aligned_cols=88  Identities=24%  Similarity=0.201  Sum_probs=73.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLLV   96 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~lv   96 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++..    . ..+++
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            456678999999999999874 47789999987654334556778899999999999999999998865    3 68999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|.+++.
T Consensus       108 ~e~~~~~~L~~~l~  121 (290)
T 1t4h_A          108 TELMTSGTLKTYLK  121 (290)
T ss_dssp             EECCCSCBHHHHHH
T ss_pred             EEecCCCCHHHHHH
Confidence            99999999998875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.44  E-value=3.7e-13  Score=86.02  Aligned_cols=85  Identities=18%  Similarity=0.098  Sum_probs=67.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+....    ....+.+|+.++..+.|+|++++++++... ..++++||+
T Consensus        55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            456788999999999999975 47789999987532    334577899999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++.+
T Consensus       131 ~~~~L~~~l~~  141 (349)
T 2w4o_A          131 TGGELFDRIVE  141 (349)
T ss_dssp             CSCBHHHHHTT
T ss_pred             CCCCHHHHHHh
Confidence            99999888764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.43  E-value=2.5e-13  Score=85.94  Aligned_cols=91  Identities=21%  Similarity=0.153  Sum_probs=74.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|..++..+.|+|++++++.+.+. ..++++
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            34566788999999999999875 588999999875421 012345577888999999999999999999988 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+|+|.+++.+
T Consensus        86 e~~~gg~L~~~l~~   99 (318)
T 1fot_A           86 DYIEGGELFSLLRK   99 (318)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             eCCCCCCHHHHHHH
Confidence            99999999988753

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.43  E-value=7.4e-13  Score=83.01  Aligned_cols=88  Identities=23%  Similarity=0.169  Sum_probs=73.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..++++||+
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (311)
T 4agu_A            5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC   84 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence            456788999999999999975 478899998866543234456688999999999999999999999988 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      .+++|..++.
T Consensus        85 ~~~~l~~~~~   94 (311)
T 4agu_A           85 DHTVLHELDR   94 (311)
T ss_dssp             SEEHHHHHHH
T ss_pred             CCchHHHHHh
Confidence            9988877654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.43  E-value=3.4e-13  Score=83.36  Aligned_cols=88  Identities=28%  Similarity=0.280  Sum_probs=74.4

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecC
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYP  100 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~  100 (113)
                      ..+.+.+.||+|+||.||.+....+..+++|.+....   .....+.+|+.++..+.|+|++++++++.+...++++||+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   89 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM   89 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecC
Confidence            4556788999999999999998777789999987653   2235688899999999999999999988755888999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+++|.+++..
T Consensus        90 ~~~~L~~~l~~  100 (279)
T 1qpc_A           90 ENGSLVDFLKT  100 (279)
T ss_dssp             TTCBHHHHTTS
T ss_pred             CCCCHHHHHhc
Confidence            99999988764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.43  E-value=1.3e-12  Score=82.30  Aligned_cols=90  Identities=27%  Similarity=0.255  Sum_probs=74.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~   92 (113)
                      +.+.+.+.||+|+||.||.+.+.     .+..+++|.+..... ......+.+|+.++..+.|+|++++++++...   .
T Consensus        31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            34467889999999999988642     467899999986532 35566788999999999999999999999873   7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+.+|+|.+++.+
T Consensus       110 ~~lv~e~~~~~~L~~~l~~  128 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPR  128 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGG
T ss_pred             EEEEEecccCCcHHHHHhh
Confidence            8999999999999998765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.43  E-value=8.5e-13  Score=84.38  Aligned_cols=88  Identities=22%  Similarity=0.113  Sum_probs=75.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++... ..++++||
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            3455688999999999999875 578899999876532 44556788999999999999999999999988 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++++|.+++.
T Consensus       113 ~~~~~L~~~l~  123 (360)
T 3eqc_A          113 MDGGSLDQVLK  123 (360)
T ss_dssp             CTTCBHHHHHH
T ss_pred             CCCCCHHHHHH
Confidence            99999998775

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.43  E-value=3.3e-13  Score=88.70  Aligned_cols=88  Identities=23%  Similarity=0.207  Sum_probs=71.9

Q ss_pred             HhcCccccCCCceEEEEEeCC-CcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||++.... +..+|+|.+...... ......+.+|..++..++|+|++++++++.+. ..++|+||+
T Consensus        77 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~  156 (437)
T 4aw2_A           77 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY  156 (437)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecC
Confidence            456889999999999999764 778999998753210 11122377888999999999999999999998 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|..++.+
T Consensus       157 ~gg~L~~~l~~  167 (437)
T 4aw2_A          157 VGGDLLTLLSK  167 (437)
T ss_dssp             TTCBHHHHHHT
T ss_pred             CCCcHHHHHHH
Confidence            99999998865

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.43  E-value=5.7e-13  Score=82.30  Aligned_cols=88  Identities=22%  Similarity=0.160  Sum_probs=73.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+....  ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            34567889999999999999875 46789999887643  23345688899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+.+++|.+++.
T Consensus        87 ~~~~~~L~~~~~   98 (277)
T 3f3z_A           87 LCTGGELFERVV   98 (277)
T ss_dssp             CCCSCBHHHHHH
T ss_pred             ccCCCcHHHHHH
Confidence            999999987654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.43  E-value=4.2e-13  Score=91.70  Aligned_cols=85  Identities=26%  Similarity=0.357  Sum_probs=70.4

Q ss_pred             CccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g  103 (113)
                      +.||+|+||.||+|.+.   .+..+|+|.++...........+.+|+.++..++|+|++++++++.....++|+||+.+|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            36999999999999753   356799999876443234456789999999999999999999999766888999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++.+
T Consensus       455 ~L~~~l~~  462 (635)
T 4fl3_A          455 PLNKYLQQ  462 (635)
T ss_dssp             EHHHHHHH
T ss_pred             CHHHHHhh
Confidence            99988753

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.42  E-value=1.3e-12  Score=81.77  Aligned_cols=88  Identities=20%  Similarity=0.207  Sum_probs=72.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+....  ......+.+|+.++..+.|+|++++++++... ..++++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            45567889999999999999875 57889999998653  23345678899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+.+++|.+++.
T Consensus        87 ~~~~~~L~~~l~   98 (304)
T 2jam_A           87 LVSGGELFDRIL   98 (304)
T ss_dssp             CCCSCBHHHHHH
T ss_pred             cCCCccHHHHHH
Confidence            999999988764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.42  E-value=7e-14  Score=91.25  Aligned_cols=88  Identities=22%  Similarity=0.188  Sum_probs=71.3

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||.+... .+..+|+|.+..... .......+.+|..++..++|+|++++++++.+. ..++|+||+
T Consensus        72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~  151 (410)
T 3v8s_A           72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM  151 (410)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence            34578999999999999875 478899999875321 011123367889999999999999999999998 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|..++.+
T Consensus       152 ~gg~L~~~l~~  162 (410)
T 3v8s_A          152 PGGDLVNLMSN  162 (410)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHHc
Confidence            99999987753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.42  E-value=2.2e-13  Score=87.93  Aligned_cols=92  Identities=23%  Similarity=0.166  Sum_probs=66.5

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHH-HhhCCCCccceeeeEEEec-eEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEI-LSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~-~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      +...+.+.+.||+|+||.||.+... .+..+++|.+..... .......+..|... +..+.|+|++++++.+... ..+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            3445667899999999999999875 478899999976432 12334445566655 5667999999999999988 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +|+||+.+|+|..++.
T Consensus       116 lv~E~~~gg~L~~~l~  131 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQ  131 (373)
T ss_dssp             EEEECCCSCBHHHHHH
T ss_pred             EEEeCCCCCcHHHHHH
Confidence            9999999999988765

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.42  E-value=1.4e-12  Score=83.38  Aligned_cols=91  Identities=20%  Similarity=0.156  Sum_probs=75.2

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ...+.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|..++..+ +|+|++++++++... ..++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            345567789999999999999875 478899999976431 234556678888888877 899999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ++||+.+|+|..++.
T Consensus        88 v~e~~~gg~L~~~l~  102 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQ  102 (345)
T ss_dssp             EECCCCSCBHHHHHH
T ss_pred             EEeCCCCCcHHHHHH
Confidence            999999999988765

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.42  E-value=5.2e-13  Score=82.84  Aligned_cols=89  Identities=25%  Similarity=0.379  Sum_probs=76.1

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ....+.+.+.||+|+||.||.+... .+..+++|.+....   .....+.+|+.++..++|+|++++++++... ..+++
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   87 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   87 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence            3445667889999999999999975 37789999987653   3456788999999999999999999999888 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|.+++.
T Consensus        88 ~e~~~~~~L~~~~~  101 (288)
T 3kfa_A           88 TEFMTYGNLLDYLR  101 (288)
T ss_dssp             EECCTTEEHHHHHH
T ss_pred             EEcCCCCcHHHHHH
Confidence            99999999998875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.42  E-value=3.4e-13  Score=85.67  Aligned_cols=90  Identities=27%  Similarity=0.359  Sum_probs=72.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+.+.||+|+||.||++...      .+..+++|.+..... ......+.+|+.++..+ .|+|++++++++... .
T Consensus        45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            44566789999999999999851      245799999875421 33456788999999999 899999999999988 9


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|.+++..
T Consensus       124 ~~lv~e~~~~g~L~~~l~~  142 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRS  142 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHT
T ss_pred             cEEEEecCCCCcHHHHHhh
Confidence            9999999999999998864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.42  E-value=3.4e-13  Score=84.49  Aligned_cols=91  Identities=30%  Similarity=0.334  Sum_probs=75.6

Q ss_pred             HHHhHhcCccccCCCceEEEEEe------CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-
Q 044522           20 IIASTLGKTPRRGGFGAVYKGAL------RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-   91 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-   91 (113)
                      ...+.+.+.||+|+||.||++..      ..+..+++|.+..... ......+.+|+.++..+ .|+|++++++++... 
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            34566788999999999999974      1356799999876532 34556788999999999 899999999999888 


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+++|+|.+++..
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~  120 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRR  120 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHH
T ss_pred             CcEEEEecCCCCCHHHHHHh
Confidence            89999999999999988753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.42  E-value=5.9e-13  Score=87.66  Aligned_cols=85  Identities=34%  Similarity=0.430  Sum_probs=72.2

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++.+. +..+++|.++...    ....+.+|+.++..++|+|++++++++...  ..++++||
T Consensus       194 ~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          194 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             HeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            3445788999999999999875 6789999987643    335688999999999999999999998766  79999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++.+
T Consensus       269 ~~~g~L~~~l~~  280 (450)
T 1k9a_A          269 MAKGSLVDYLRS  280 (450)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             cCCCcHHHHHHh
Confidence            999999988753

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.42  E-value=5.3e-13  Score=85.08  Aligned_cols=89  Identities=20%  Similarity=0.173  Sum_probs=73.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.++.... .......+.+|..++..+.|+|++++++.+... ..++++|
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E   85 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence            4556788999999999999875 588999999875321 112345678899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|..++.
T Consensus        86 ~~~gg~L~~~l~   97 (337)
T 1o6l_A           86 YANGGELFFHLS   97 (337)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             CCCCCcHHHHHH
Confidence            999999987764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.42  E-value=1.7e-12  Score=81.55  Aligned_cols=83  Identities=20%  Similarity=0.187  Sum_probs=69.9

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      .+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..+ .|+|++++++++... ..++++||+.+
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   95 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG   95 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCC
Confidence            477999999999999864 57899999987643  23345677888888874 799999999999998 99999999999


Q ss_pred             CChhhhcc
Q 044522          103 GSLDHNLC  110 (113)
Q Consensus       103 g~L~~~l~  110 (113)
                      |+|.+++.
T Consensus        96 ~~L~~~l~  103 (316)
T 2ac3_A           96 GSILSHIH  103 (316)
T ss_dssp             CBHHHHHH
T ss_pred             CcHHHHHh
Confidence            99988774

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.42  E-value=2.8e-13  Score=83.17  Aligned_cols=88  Identities=28%  Similarity=0.323  Sum_probs=74.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||.+....+..+++|.+.....   ....+.+|+.++..++|+|++++++++... ..++++||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            34556788999999999999987778899999886542   224678899999999999999999999888 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus        85 ~~~~~L~~~~~~   96 (267)
T 3t9t_A           85 MEHGCLSDYLRT   96 (267)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             CCCCcHHHHHhh
Confidence            999999988753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.42  E-value=5.4e-13  Score=86.49  Aligned_cols=89  Identities=22%  Similarity=0.228  Sum_probs=73.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~   97 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++...   ..++++
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            4556788999999999999975 478999999875432 23345677899999999999999999998764   679999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+|+|.+++.+
T Consensus        89 e~~~~g~L~~~l~~  102 (396)
T 4eut_A           89 EFCPCGSLYTVLEE  102 (396)
T ss_dssp             CCCTTEEHHHHTTS
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999988764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.42  E-value=1.3e-12  Score=82.69  Aligned_cols=92  Identities=22%  Similarity=0.256  Sum_probs=76.2

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ....+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..+.|+|++++++++... ..+++
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            3445667789999999999999875 478899999866543344556678999999999999999999999998 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|..++.
T Consensus       103 ~e~~~~~~l~~~~~  116 (331)
T 4aaa_A          103 FEFVDHTILDDLEL  116 (331)
T ss_dssp             EECCSEEHHHHHHH
T ss_pred             EecCCcchHHHHHh
Confidence            99999988877643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.42  E-value=7.9e-13  Score=82.33  Aligned_cols=93  Identities=16%  Similarity=0.050  Sum_probs=77.0

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .....+.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+.++..+.|+|++++++++... ..+
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            34456677899999999999999875 477899999875421 234556788899999999999999999999988 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+++|.+++.
T Consensus        92 lv~e~~~~~~L~~~~~  107 (294)
T 2rku_A           92 VVLELCRRRSLLELHK  107 (294)
T ss_dssp             EEEECCTTCBHHHHHH
T ss_pred             EEEecCCCCCHHHHHH
Confidence            9999999999988764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.42  E-value=3.2e-13  Score=85.53  Aligned_cols=91  Identities=23%  Similarity=0.225  Sum_probs=69.4

Q ss_pred             HHHhHhcCccccCCCceEEEEEe----CCCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGAL----RDGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ...+.+.+.||+|+||.||++..    ..+..+++|.+.....  .......+.+|+.++..+.|+|++++++++... .
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            34566788999999999999986    3578899999876431  122345577899999999999999999999988 9


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+.+|+|.+++.
T Consensus        96 ~~lv~e~~~~~~L~~~l~  113 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLE  113 (327)
T ss_dssp             EEEEEECCTTEEHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHH
Confidence            999999999999988764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.42  E-value=1.2e-12  Score=81.37  Aligned_cols=83  Identities=19%  Similarity=0.202  Sum_probs=70.3

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCNGS  104 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~g~  104 (113)
                      ..||+|+||.||++... .+..+++|.+....  ......+.+|+.++..+.|+|++++++++... ..++++||+++++
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  105 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS  105 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence            47999999999999864 57889999987654  34556788999999999999999999999988 9999999999999


Q ss_pred             hhhhccC
Q 044522          105 LDHNLCG  111 (113)
Q Consensus       105 L~~~l~~  111 (113)
                      |.+++..
T Consensus       106 L~~~l~~  112 (295)
T 2clq_A          106 LSALLRS  112 (295)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9887753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.41  E-value=8e-13  Score=88.06  Aligned_cols=89  Identities=16%  Similarity=0.125  Sum_probs=70.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH-----------HHHHHHHHHHHHHhhCCCCccceeeeEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA-----------QAAFQFISEDEILSCAQHRSLVVLVGYCI   89 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~~~~~~h~~i~~l~~~~~   89 (113)
                      .|.+.+.||+|+||.||.+... .+..+|+|.+.......           .....+.+|+.++..++|||++++++++.
T Consensus        37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  116 (504)
T 3q5i_A           37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE  116 (504)
T ss_dssp             TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            4556788999999999999875 47889999987543111           12356788999999999999999999999


Q ss_pred             ec-eEEEEEecCCCCChhhhcc
Q 044522           90 EI-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        90 ~~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      .. ..++|+||+.+|+|.+++.
T Consensus       117 ~~~~~~lv~e~~~gg~L~~~l~  138 (504)
T 3q5i_A          117 DKKYFYLVTEFYEGGELFEQII  138 (504)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHH
T ss_pred             cCCEEEEEEecCCCCcHHHHHH
Confidence            98 9999999999999987664

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.41  E-value=5.8e-13  Score=85.26  Aligned_cols=89  Identities=21%  Similarity=0.140  Sum_probs=73.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..+.|+|++++++.+.+. ..++++|
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  121 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence            4456688999999999999875 588999999875421 112345678899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|.+++.
T Consensus       122 ~~~gg~L~~~l~  133 (350)
T 1rdq_E          122 YVAGGEMFSHLR  133 (350)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             CCCCCcHHHHHH
Confidence            999999998875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.41  E-value=3.8e-13  Score=85.19  Aligned_cols=91  Identities=22%  Similarity=0.222  Sum_probs=71.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ....+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..+++
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            3445677899999999999999864 578899999976543233455677899999999999999999999998 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+ +|.+++.
T Consensus       112 ~e~~~~-~L~~~~~  124 (329)
T 3gbz_A          112 FEYAEN-DLKKYMD  124 (329)
T ss_dssp             EECCSE-EHHHHHH
T ss_pred             EecCCC-CHHHHHh
Confidence            999984 8887764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.41  E-value=7.7e-13  Score=87.65  Aligned_cols=91  Identities=19%  Similarity=0.166  Sum_probs=75.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..|.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|+.++..++|+|++++++++... ..++++
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            44567889999999999999875 588999999865421 123345688999999999999999999999998 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+|+|.+++..
T Consensus       106 e~~~~~~L~~~~~~  119 (484)
T 3nyv_A          106 EVYTGGELFDEIIS  119 (484)
T ss_dssp             CCCCSCBHHHHHHT
T ss_pred             ecCCCCCHHHHHHh
Confidence            99999999887654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.41  E-value=1.1e-12  Score=82.85  Aligned_cols=93  Identities=23%  Similarity=0.189  Sum_probs=77.2

Q ss_pred             chhHHHHhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe
Q 044522           16 SPCKIIASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE   90 (113)
Q Consensus        16 ~~~~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~   90 (113)
                      +......+.+.+.||+|+||.||++.+     ..+..+++|.+....  ......+.+|+.++..+.|+|++++++++..
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   95 (327)
T 3lxl_A           18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYG   95 (327)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEec
Confidence            344556667889999999999999984     247789999988654  4556678999999999999999999998874


Q ss_pred             --c-eEEEEEecCCCCChhhhcc
Q 044522           91 --I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 --~-~~~lv~e~~~~g~L~~~l~  110 (113)
                        . ..++++||+++++|.+++.
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~  118 (327)
T 3lxl_A           96 PGRQSLRLVMEYLPSGCLRDFLQ  118 (327)
T ss_dssp             SSSCEEEEEEECCTTCBHHHHHH
T ss_pred             CCCceEEEEEeecCCCCHHHHHH
Confidence              3 7899999999999998775

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.41  E-value=1e-12  Score=81.95  Aligned_cols=91  Identities=27%  Similarity=0.234  Sum_probs=71.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--   91 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--   91 (113)
                      ....+.+.+.||+|+||.||.+.+     ..+..+++|.+..... ......+.+|+.++..++|+|++++++++...  
T Consensus        19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (302)
T 4e5w_A           19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG   97 (302)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred             hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence            344566788999999999999984     2477899999875431 22345688999999999999999999998764  


Q ss_pred             -eEEEEEecCCCCChhhhcc
Q 044522           92 -VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~  110 (113)
                       ..++++||+++|+|.+++.
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~  117 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLP  117 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHH
T ss_pred             ceEEEEEEeCCCCcHHHHHH
Confidence             5889999999999998873

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=3.2e-12  Score=79.41  Aligned_cols=85  Identities=26%  Similarity=0.355  Sum_probs=71.2

Q ss_pred             cCccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~  102 (113)
                      ++.||+|+||.||++.+.   .+..+++|.+..... ......+.+|+.++..+.|+|++++++++.....++++||+.+
T Consensus        15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~   93 (287)
T 1u59_A           15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGG   93 (287)
T ss_dssp             EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTT
T ss_pred             hccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCC
Confidence            348999999999999853   467799999986532 4556778899999999999999999999954489999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      ++|.+++.+
T Consensus        94 ~~L~~~l~~  102 (287)
T 1u59_A           94 GPLHKFLVG  102 (287)
T ss_dssp             EEHHHHHTT
T ss_pred             CCHHHHHHh
Confidence            999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.41  E-value=6.3e-13  Score=83.67  Aligned_cols=89  Identities=21%  Similarity=0.331  Sum_probs=74.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ..+.+.+.||+|+||.||++...      .+..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            45567889999999999998753      256799999875432 34556788999999999999999999999888 89


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+.+|+|.+++.
T Consensus       104 ~lv~e~~~~~~L~~~l~  120 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLR  120 (322)
T ss_dssp             EEEEECCTTCBHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHH
Confidence            99999999999998875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.41  E-value=1.1e-12  Score=82.71  Aligned_cols=91  Identities=21%  Similarity=0.136  Sum_probs=75.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH----HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA----QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.......    .....+.+|+.++..+.|+|++++++++... ..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            44567899999999999999875 57889999987643111    1245688999999999999999999999988 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+++|.+++.+
T Consensus        92 lv~e~~~~~~L~~~l~~  108 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQ  108 (321)
T ss_dssp             EEECCCCSCBHHHHHHT
T ss_pred             EEEEcCCCCcHHHHHHh
Confidence            99999999999988764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.41  E-value=1.3e-12  Score=85.43  Aligned_cols=90  Identities=21%  Similarity=0.213  Sum_probs=71.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh------HHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC------AQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~   94 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+......      ......+.+|+.++..++|+|++++++++.....+
T Consensus       136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~  215 (419)
T 3i6u_A          136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY  215 (419)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSEEE
T ss_pred             cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCceE
Confidence            4556788999999999999875 4788999998753210      11223477899999999999999999998655888


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+|+|.+++.+
T Consensus       216 lv~e~~~~g~L~~~l~~  232 (419)
T 3i6u_A          216 IVLELMEGGELFDKVVG  232 (419)
T ss_dssp             EEEECCTTCBGGGGTSS
T ss_pred             EEEEcCCCCcHHHHHhc
Confidence            99999999999888764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.41  E-value=3.9e-13  Score=85.96  Aligned_cols=93  Identities=24%  Similarity=0.235  Sum_probs=72.9

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eE
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~   93 (113)
                      .+...+.+.+.||+|+||.||.+... .+..+|+|.++.... .......+..|..++..+ .|+|++++++.+.+. ..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34456667899999999999999975 478899999975321 012234566777777765 899999999999988 99


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++|+||+++|+|..++.
T Consensus        94 ~lv~E~~~gg~L~~~l~  110 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQ  110 (345)
T ss_dssp             EEEEECCTTCBHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHH
Confidence            99999999999998775

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.40  E-value=2.4e-12  Score=80.11  Aligned_cols=87  Identities=21%  Similarity=0.207  Sum_probs=73.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe---------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE---------   90 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~---------   90 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+...   ......+.+|+.++..+.|+|++++++.+..         
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            34556788999999999999864 5889999998754   3555678899999999999999999988754         


Q ss_pred             ----c-eEEEEEecCCCCChhhhcc
Q 044522           91 ----I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 ----~-~~~lv~e~~~~g~L~~~l~  110 (113)
                          . ..++++||+++|+|.+++.
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~  107 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIH  107 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHH
T ss_pred             ccccCCceEEEEecCCCCCHHHhhh
Confidence                3 7899999999999998875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.40  E-value=1.4e-12  Score=81.38  Aligned_cols=91  Identities=20%  Similarity=0.128  Sum_probs=69.8

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH------------------------HHHHHHHHHHHHHh
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA------------------------QAAFQFISEDEILS   74 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~------------------------~~~~~~~~e~~~~~   74 (113)
                      ...+.+.+.||+|+||.||++... .+..+++|.+.......                        .....+.+|+.++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            345667889999999999999864 57889999987543100                        11245788999999


Q ss_pred             hCCCCccceeeeEEEe--c-eEEEEEecCCCCChhhhcc
Q 044522           75 CAQHRSLVVLVGYCIE--I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        75 ~~~h~~i~~l~~~~~~--~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      .++|+|++++++++..  . ..++++||+++++|.+++.
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  130 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT  130 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh
Confidence            9999999999999986  4 7999999999999887654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.40  E-value=1.5e-12  Score=81.37  Aligned_cols=89  Identities=22%  Similarity=0.197  Sum_probs=75.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..+.|+|++++++.+... ..++++||
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            3456788999999999999864 578899999876432 23456688899999999999999999999988 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++++|.+++.+
T Consensus       102 ~~~~~L~~~~~~  113 (303)
T 3a7i_A          102 LGGGSALDLLEP  113 (303)
T ss_dssp             CTTEEHHHHHTT
T ss_pred             CCCCcHHHHHhc
Confidence            999999988764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.40  E-value=8.6e-13  Score=83.37  Aligned_cols=91  Identities=25%  Similarity=0.342  Sum_probs=72.9

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ...+.+.+.||+|+||.||++.+.      .+..+++|.+..... ......+.+|+.++..+.|+|++++++++... .
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            345567889999999999999742      366899999875432 44556788999999999999999999999988 8


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++++|.+++.+
T Consensus       108 ~~lv~e~~~~~~L~~~l~~  126 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRE  126 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHH
T ss_pred             cEEEEecCCCCcHHHHHHh
Confidence            9999999999999988753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.40  E-value=3e-13  Score=84.03  Aligned_cols=92  Identities=22%  Similarity=0.163  Sum_probs=76.0

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ....+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..+.|+|++++++++... ..+++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            3345667899999999999999875 578899999875432223456688999999999999999999999988 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|.+++.
T Consensus       100 ~e~~~~~~L~~~l~  113 (287)
T 2wei_A          100 GELYTGGELFDEII  113 (287)
T ss_dssp             ECCCCSCBHHHHHH
T ss_pred             EEccCCCCHHHHHH
Confidence            99999999977653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.40  E-value=4.7e-13  Score=87.43  Aligned_cols=88  Identities=24%  Similarity=0.192  Sum_probs=72.1

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||.+... .+..+|+|.++.... .......+.+|..++..+.|+|++++++++.+. ..++|+||+
T Consensus        64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~  143 (412)
T 2vd5_A           64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYY  143 (412)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCC
Confidence            35678999999999999875 588999999975321 011223477888899999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|..++.+
T Consensus       144 ~gg~L~~~l~~  154 (412)
T 2vd5_A          144 VGGDLLTLLSK  154 (412)
T ss_dssp             CSCBHHHHHHH
T ss_pred             CCCcHHHHHHh
Confidence            99999988753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.40  E-value=5e-13  Score=83.13  Aligned_cols=87  Identities=22%  Similarity=0.173  Sum_probs=71.6

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.+.||+|+||.||++....+..+++|.+............+.+|+.++..+.|+|++++++++... ..++++||+.
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence            446678999999999999886688999999875442222345677899999999999999999999988 9999999998


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      + +|.+++.
T Consensus        84 ~-~l~~~~~   91 (288)
T 1ob3_A           84 Q-DLKKLLD   91 (288)
T ss_dssp             E-EHHHHHH
T ss_pred             C-CHHHHHH
Confidence            5 7777654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.39  E-value=1.2e-12  Score=81.62  Aligned_cols=89  Identities=28%  Similarity=0.422  Sum_probs=71.7

Q ss_pred             HhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~l   95 (113)
                      .+.+.+.||+|+||.||++....    ...+++|.+..... ......+.+|+.++..+.|+|++++++++...  ..++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            34567889999999999998532    23578888875432 45567788999999999999999999987654  7899


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++||+.+|+|.+++.+
T Consensus       105 v~e~~~~~~L~~~l~~  120 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRN  120 (298)
T ss_dssp             EEECCTTCBHHHHHHC
T ss_pred             EEeCCCCCCHHHHHHh
Confidence            9999999999998864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.39  E-value=3.6e-12  Score=79.92  Aligned_cols=92  Identities=25%  Similarity=0.298  Sum_probs=75.0

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMS-ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ....+.+.+.||+|+||.||++... .+..+++|.+.... ........+.+|+..+..++|+|++++++.+... ..++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            3345667889999999999999864 57899999987532 1244566788999999999999999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ++||+.+++|.+++.
T Consensus       110 v~e~~~~~~L~~~l~  124 (310)
T 2wqm_A          110 VLELADAGDLSRMIK  124 (310)
T ss_dssp             EEECCCSCBHHHHHH
T ss_pred             EEecCCCCCHHHHHH
Confidence            999999999988764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.39  E-value=9.7e-13  Score=82.96  Aligned_cols=88  Identities=22%  Similarity=0.217  Sum_probs=60.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..++++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            45667889999999999999864 478899999875431 22335677899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+. |+|.+++.
T Consensus        84 ~~~-~~L~~~l~   94 (317)
T 2pmi_A           84 FMD-NDLKKYMD   94 (317)
T ss_dssp             CCC-CBHHHHHH
T ss_pred             ecC-CCHHHHHH
Confidence            998 58877653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.39  E-value=1.5e-12  Score=81.10  Aligned_cols=85  Identities=19%  Similarity=0.196  Sum_probs=70.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..++++||+
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   83 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence            446778999999999999875 478899999976543244556788999999999999999999999998 999999999


Q ss_pred             CCCChhhh
Q 044522          101 CNGSLDHN  108 (113)
Q Consensus       101 ~~g~L~~~  108 (113)
                      .+ ++...
T Consensus        84 ~~-~l~~~   90 (292)
T 3o0g_A           84 DQ-DLKKY   90 (292)
T ss_dssp             SE-EHHHH
T ss_pred             CC-CHHHH
Confidence            86 44443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.39  E-value=1.1e-12  Score=81.31  Aligned_cols=91  Identities=23%  Similarity=0.261  Sum_probs=73.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWL   94 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~   94 (113)
                      ....+.+.+.||+|+||.||++....    +..+++|....... ......+.+|+..+..++|+|++++++++.....+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEccCccE
Confidence            33456678899999999999998632    45689998875432 34556788999999999999999999988555888


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+++|.+++.
T Consensus        92 lv~e~~~~~~L~~~l~  107 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQ  107 (281)
T ss_dssp             EEEECCTTEEHHHHHH
T ss_pred             EEEecCCCCCHHHHHH
Confidence            9999999999998875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.39  E-value=2e-12  Score=81.20  Aligned_cols=88  Identities=20%  Similarity=0.209  Sum_probs=72.3

Q ss_pred             HHhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWL   94 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~   94 (113)
                      ..+.+.+.||+|+||.||++.. ..+..+++|.+....  ......+.+|+.++..+.|+|++++++++..    . ..+
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            4566788999999999999986 458899999987654  4566678899999999999999999998862    3 788


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+|+|.+++.
T Consensus       107 lv~e~~~~~~L~~~l~  122 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIE  122 (317)
T ss_dssp             EEEECCTTCBHHHHHH
T ss_pred             EEEEeCCCCcHHHHHH
Confidence            9999999999988765

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1.1e-12  Score=83.32  Aligned_cols=87  Identities=30%  Similarity=0.411  Sum_probs=71.8

Q ss_pred             HhcCccccCCCceEEEEEeCC-----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      .+.+.||+|+||.||++....     +..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..++++
T Consensus        47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  125 (333)
T 1mqb_A           47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT  125 (333)
T ss_dssp             EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence            345789999999999998532     23589999876432 34556788999999999999999999999888 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+|+|.+++.+
T Consensus       126 e~~~~~~L~~~l~~  139 (333)
T 1mqb_A          126 EYMENGALDKFLRE  139 (333)
T ss_dssp             ECCTTEEHHHHHHH
T ss_pred             eCCCCCcHHHHHHh
Confidence            99999999988753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.38  E-value=2.3e-12  Score=80.29  Aligned_cols=91  Identities=19%  Similarity=0.127  Sum_probs=73.9

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-------hHHHHHHHHHHHHHHhhCC-CCccceeeeEEEe
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-------CAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIE   90 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-------~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~   90 (113)
                      ...+.+.+.||+|+||.||++... .+..+++|.+.....       .......+.+|+.++..+. |+|++++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            345567788999999999999875 578899999875420       0123455778999999885 9999999999988


Q ss_pred             c-eEEEEEecCCCCChhhhcc
Q 044522           91 I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      . ..++++||+.+++|.+++.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~  116 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLT  116 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHH
T ss_pred             CCeEEEEEeccCCCcHHHHHh
Confidence            8 9999999999999988865

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.38  E-value=1.1e-12  Score=81.90  Aligned_cols=88  Identities=24%  Similarity=0.298  Sum_probs=72.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+....  ......+.+|+.++..+.|+|++++++++... ..++++|
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            44566788999999999999975 47889999987543  23456788899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++++|..++.
T Consensus        97 ~~~~~~l~~~~~  108 (302)
T 2j7t_A           97 FCPGGAVDAIML  108 (302)
T ss_dssp             CCTTEEHHHHHH
T ss_pred             eCCCCcHHHHHH
Confidence            999999987764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.38  E-value=5.5e-13  Score=82.97  Aligned_cols=90  Identities=29%  Similarity=0.368  Sum_probs=73.7

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEec
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY   99 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~   99 (113)
                      ...+.+.+.||+|+||.||++...  ..+++|.+............+.+|+.++..+.|+|+++++++......++++||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~  100 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW  100 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence            344567889999999999999854  359999987654335666778999999999999999999996654488999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+++|.+++..
T Consensus       101 ~~~~~L~~~l~~  112 (289)
T 3og7_A          101 CEGSSLYHHLHA  112 (289)
T ss_dssp             CCEEEHHHHHTT
T ss_pred             cCCCcHHHHHhh
Confidence            999999888753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.38  E-value=1.2e-12  Score=80.55  Aligned_cols=89  Identities=28%  Similarity=0.425  Sum_probs=70.0

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchh--HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC--AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++.+. +..+++|.+......  ......+.+|+.++..++|+|++++++++... ..++++|
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            4556788999999999999875 678999998754310  12245688899999999999999999999988 8999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+++|.+++.+
T Consensus        87 ~~~~~~L~~~~~~   99 (271)
T 3dtc_A           87 FARGGPLNRVLSG   99 (271)
T ss_dssp             CCTTEEHHHHHTS
T ss_pred             cCCCCCHHHHhhc
Confidence            9999999888754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.38  E-value=1.5e-12  Score=83.48  Aligned_cols=91  Identities=23%  Similarity=0.215  Sum_probs=73.2

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ...+.+.+.||+|+||.||.+... .+..+|+|.+..... .......+..|..++..+ .|+|++++++++... ..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            344567789999999999999875 478999999875421 122345567888888877 799999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      |+||+.+|+|..++.
T Consensus       102 v~E~~~gg~L~~~l~  116 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQ  116 (353)
T ss_dssp             EEECCCSCBHHHHHH
T ss_pred             EEeCCCCCcHHHHHH
Confidence            999999999988764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.38  E-value=1.1e-12  Score=88.75  Aligned_cols=88  Identities=22%  Similarity=0.233  Sum_probs=72.7

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      .+.+.||+|+||.||.+... .+..+|+|.+..... .......+.+|+.++..++|+|++++++.+.+. ..++|+||+
T Consensus       187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~  266 (576)
T 2acx_A          187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM  266 (576)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence            34578999999999999875 588999999875421 012234577899999999999999999999988 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|..++..
T Consensus       267 ~gg~L~~~l~~  277 (576)
T 2acx_A          267 NGGDLKFHIYH  277 (576)
T ss_dssp             CSCBHHHHHHS
T ss_pred             CCCcHHHHHHh
Confidence            99999987754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.38  E-value=1.7e-12  Score=82.68  Aligned_cols=90  Identities=21%  Similarity=0.121  Sum_probs=74.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCC--CccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH--RSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h--~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++....+..+++|.+............+.+|+.++..+.|  +|++++++++... ..++++
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~   88 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM   88 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence            3456778899999999999987778889999987654335566778999999999976  9999999999988 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      | +.+++|.+++.+
T Consensus        89 e-~~~~~L~~~l~~  101 (343)
T 3dbq_A           89 E-CGNIDLNSWLKK  101 (343)
T ss_dssp             C-CCSEEHHHHHHH
T ss_pred             e-CCCCCHHHHHHh
Confidence            9 567788887653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.38  E-value=1.1e-12  Score=82.58  Aligned_cols=90  Identities=24%  Similarity=0.323  Sum_probs=67.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC-C---cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE--
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD-G---QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW--   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~-~---~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~--   93 (113)
                      ..+.+.+.||+|+||.||++.... +   ..+++|.+............+.+|+.++..++|+|++++++++... ..  
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            455678899999999999998643 2   2789999876432245567789999999999999999999999776 44  


Q ss_pred             ----EEEEecCCCCChhhhcc
Q 044522           94 ----LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ----~lv~e~~~~g~L~~~l~  110 (113)
                          ++++||+.+|+|.+++.
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~  123 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLL  123 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHH
T ss_pred             CCccEEEEEeccCCcHHHHHH
Confidence                89999999999988764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.37  E-value=6.3e-13  Score=85.74  Aligned_cols=87  Identities=29%  Similarity=0.439  Sum_probs=70.5

Q ss_pred             HhcCccccCCCceEEEEEeC--C--CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR--D--GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVY   97 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~--~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~   97 (113)
                      .+.+.||+|+||.||++.+.  .  +..+++|.++.... ......+.+|+.++..+.|+|++++++++...  ..++++
T Consensus        92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC-SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            45678999999999999853  2  23578998865331 35567789999999999999999999987654  788999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+|+|.+++.+
T Consensus       171 e~~~~g~L~~~l~~  184 (373)
T 3c1x_A          171 PYMKHGDLRNFIRN  184 (373)
T ss_dssp             ECCTTCBHHHHHHC
T ss_pred             ECCCCCCHHHHHhh
Confidence            99999999998864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.37  E-value=2.1e-12  Score=81.60  Aligned_cols=92  Identities=25%  Similarity=0.343  Sum_probs=72.7

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcE--EEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQV--VAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~--~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~   93 (113)
                      ....+.+.+.||+|+||.||++... .+..  +++|.+..... ......+.+|+.++..+ .|+|++++++++... ..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            3455667889999999999999864 3544  48888875321 33455688999999999 899999999999998 99


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++|+|.+++.+
T Consensus       102 ~lv~e~~~~~~L~~~l~~  119 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRK  119 (327)
T ss_dssp             EEEECCCTTCBHHHHHHT
T ss_pred             EEEEecCCCCCHHHHHHh
Confidence            999999999999998865

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.37  E-value=4e-13  Score=83.07  Aligned_cols=87  Identities=33%  Similarity=0.424  Sum_probs=72.2

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLV   96 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv   96 (113)
                      ....+.+.+.||+|+||.||.+... +..+++|.+....    ....+.+|+.++..+.|+|++++++++...  ..+++
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv   93 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   93 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence            4456677899999999999999864 6789999987542    345688899999999999999999987655  78999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|.+++.
T Consensus        94 ~e~~~~~~L~~~l~  107 (278)
T 1byg_A           94 TEYMAKGSLVDYLR  107 (278)
T ss_dssp             ECCCTTEEHHHHHH
T ss_pred             EecCCCCCHHHHHH
Confidence            99999999988764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.37  E-value=2e-12  Score=79.93  Aligned_cols=91  Identities=23%  Similarity=0.256  Sum_probs=74.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+...... ......+.+|+.++..+.|+|++++++++... ..++++
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            44567788999999999999864 5889999998753210 11235688899999999999999999999988 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++++|.+++.+
T Consensus        91 e~~~~~~L~~~l~~  104 (278)
T 3cok_A           91 EMCHNGEMNRYLKN  104 (278)
T ss_dssp             ECCTTEEHHHHHHT
T ss_pred             ecCCCCcHHHHHhh
Confidence            99999999988764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.37  E-value=1.4e-12  Score=84.81  Aligned_cols=90  Identities=19%  Similarity=0.146  Sum_probs=71.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      ..+.+.+.||+|+||.||.+... .+..+|+|.++.... .......+..|..++..+ +|+|++++++++.+. ..++|
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            44566789999999999999875 477899999876432 122334567788777765 899999999999988 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+|+|..++.
T Consensus       132 ~E~~~gg~L~~~l~  145 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQ  145 (396)
T ss_dssp             EECCTTCBHHHHHH
T ss_pred             EEcCCCCcHHHHHH
Confidence            99999999988765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.37  E-value=1.2e-12  Score=82.71  Aligned_cols=89  Identities=29%  Similarity=0.332  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---e
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL-----RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~   92 (113)
                      ..+.+.+.||+|+||.||++.+     ..+..+++|.+....  ......+.+|+.++..+.|+|++++.+++...   .
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            4456778999999999999974     247789999987654  45667789999999999999999999988653   6


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++++|.+++.+
T Consensus       119 ~~lv~e~~~~~~L~~~l~~  137 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQK  137 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHH
T ss_pred             eEEEEECCCCCCHHHHHHh
Confidence            8899999999999988753

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.37  E-value=3.6e-12  Score=78.88  Aligned_cols=89  Identities=20%  Similarity=0.181  Sum_probs=74.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH----HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA----QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+.......    .....+.+|+.++..+.|+|++++++++... ..++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            4556788999999999999875 57899999987543111    1245688999999999999999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ++||+.+++|.+++.
T Consensus        86 v~e~~~~~~L~~~l~  100 (283)
T 3bhy_A           86 ILELVSGGELFDFLA  100 (283)
T ss_dssp             EEECCCSCBHHHHHH
T ss_pred             EEeecCCCcHHHHHH
Confidence            999999999998764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.37  E-value=2.1e-12  Score=83.71  Aligned_cols=89  Identities=21%  Similarity=0.126  Sum_probs=74.2

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC--CCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ--HRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~--h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++....+..+++|.+............+.+|+.++..+.  |+|++++++++... ..++++|
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E  136 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME  136 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence            35677899999999999998766888999998765433556677899999999885  59999999999988 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                       +.+++|.+++.+
T Consensus       137 -~~~~~L~~~l~~  148 (390)
T 2zmd_A          137 -CGNIDLNSWLKK  148 (390)
T ss_dssp             -CCSEEHHHHHHH
T ss_pred             -cCCCCHHHHHHh
Confidence             567888887653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.37  E-value=1.3e-12  Score=82.60  Aligned_cols=89  Identities=33%  Similarity=0.367  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+.+.||+|+||.||++....      ...+++|.+..... ......+.+|+.++..+ .|+|++++++++... .
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            345567889999999999998632      24799999876532 34556788999999999 899999999999888 9


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+++|+|.+++.
T Consensus       125 ~~lv~e~~~~g~L~~~l~  142 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLR  142 (333)
T ss_dssp             CEEEEECCTTEEHHHHHH
T ss_pred             eEEEEecCCCCcHHHHHH
Confidence            999999999999998875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.36  E-value=1.9e-12  Score=80.60  Aligned_cols=91  Identities=25%  Similarity=0.329  Sum_probs=70.5

Q ss_pred             HHhHhcC-ccccCCCceEEEEEe--C-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEE
Q 044522           21 IASTLGK-TPRRGGFGAVYKGAL--R-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLV   96 (113)
Q Consensus        21 ~~~~~~~-~lg~g~~~~v~~~~~--~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv   96 (113)
                      ..+.+.+ .||+|+||.||++.+  . .+..+++|.+............+.+|+.++..+.|+|++++++++.....+++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv   95 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV   95 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEE
Confidence            3444555 899999999999964  2 35679999987643223345678899999999999999999999944488999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      +||+.+++|.+++.+
T Consensus        96 ~e~~~~~~L~~~l~~  110 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQ  110 (291)
T ss_dssp             EECCTTEEHHHHHHH
T ss_pred             EEeCCCCCHHHHHHh
Confidence            999999999988753

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.36  E-value=4.2e-12  Score=79.42  Aligned_cols=84  Identities=38%  Similarity=0.533  Sum_probs=70.6

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCCC
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMS--ACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ++.||+|+||.||++.. .+..+++|.+....  ........+.+|+.++..+.|+|++++++++... ..++++||+++
T Consensus        36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  114 (307)
T 2nru_A           36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN  114 (307)
T ss_dssp             CCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             CCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCC
Confidence            47799999999999986 46789999886532  1123456688999999999999999999999888 99999999999


Q ss_pred             CChhhhcc
Q 044522          103 GSLDHNLC  110 (113)
Q Consensus       103 g~L~~~l~  110 (113)
                      ++|.+++.
T Consensus       115 ~~L~~~l~  122 (307)
T 2nru_A          115 GSLLDRLS  122 (307)
T ss_dssp             CBHHHHHH
T ss_pred             CcHHHHHH
Confidence            99988775

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.36  E-value=1.7e-12  Score=82.88  Aligned_cols=85  Identities=16%  Similarity=0.061  Sum_probs=69.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.....      ...+|+.++..+ .|+|++++++++.+. ..++++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            44567789999999999999875 478899999976431      123466666665 799999999999988 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+.+|+|.+++.+
T Consensus        96 E~~~gg~L~~~i~~  109 (342)
T 2qr7_A           96 ELMKGGELLDKILR  109 (342)
T ss_dssp             CCCCSCBHHHHHHT
T ss_pred             eCCCCCcHHHHHHH
Confidence            99999999987754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.36  E-value=2.8e-12  Score=80.86  Aligned_cols=91  Identities=22%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh------HHHHHHHHHHHHHHhhCCCCccceeeeEEEeceE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC------AQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~   93 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+......      ......+.+|+.++..+.|+|++++++++.....
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   89 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY   89 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence            45667899999999999999875 4788999998653210      1122347789999999999999999999876678


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+++|.+++..
T Consensus        90 ~lv~e~~~~~~L~~~~~~  107 (322)
T 2ycf_A           90 YIVLELMEGGELFDKVVG  107 (322)
T ss_dssp             EEEEECCTTEETHHHHST
T ss_pred             EEEEecCCCCcHHHHHhc
Confidence            999999999999887654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.36  E-value=4.6e-12  Score=79.55  Aligned_cols=90  Identities=17%  Similarity=0.074  Sum_probs=75.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+..+..+.|+|++++++++... ..++++
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            34567788999999999999875 578899999875432 133456788999999999999999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+++|.+++.
T Consensus       114 e~~~~~~L~~~l~  126 (309)
T 2h34_A          114 RLINGVDLAAMLR  126 (309)
T ss_dssp             ECCCCEEHHHHHH
T ss_pred             EecCCCCHHHHHH
Confidence            9999999998765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.35  E-value=1.9e-12  Score=80.32  Aligned_cols=90  Identities=30%  Similarity=0.324  Sum_probs=71.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh--HHHH---HHHHHHHHHHhhCCCCccceeeeEEEeceEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC--AQAA---FQFISEDEILSCAQHRSLVVLVGYCIEIVWL   94 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~---~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~   94 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+......  ....   ..+.+|+.++..++|+|++++++++.... +
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~   97 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-R   97 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-E
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-e
Confidence            44567888999999999999874 5788999998654311  1111   56889999999999999999999885553 5


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+|+|.+.+.+
T Consensus        98 lv~e~~~~~~L~~~l~~  114 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLD  114 (287)
T ss_dssp             EEEECCTTCBHHHHHHC
T ss_pred             EEEEecCCCCHHHHHhc
Confidence            89999999999877643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.35  E-value=2.4e-12  Score=86.68  Aligned_cols=87  Identities=21%  Similarity=0.210  Sum_probs=71.9

Q ss_pred             hcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           25 LGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.||+|+||.||.+... .+..+++|.+...... ......+..|..++..++|+|++++++.+... ..++++||+.
T Consensus       189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~  268 (543)
T 3c4z_A          189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN  268 (543)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence            3467999999999999875 5889999998754310 12235678899999999999999999999888 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|..++.+
T Consensus       269 gg~L~~~l~~  278 (543)
T 3c4z_A          269 GGDIRYHIYN  278 (543)
T ss_dssp             TCBHHHHHHT
T ss_pred             CCCHHHHHHH
Confidence            9999887754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.35  E-value=4.4e-12  Score=80.60  Aligned_cols=87  Identities=16%  Similarity=0.123  Sum_probs=73.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHH---------------HHHHHHHHHHHHhhCCCCccceee
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQ---------------AAFQFISEDEILSCAQHRSLVVLV   85 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~---------------~~~~~~~e~~~~~~~~h~~i~~l~   85 (113)
                      ..+.+.+.||+|+||.||.+.. .+..+++|.+........               ....+.+|+.++..++|+|+++++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            3556778899999999999988 788999999875321000               116788999999999999999999


Q ss_pred             eEEEec-eEEEEEecCCCCChhhh
Q 044522           86 GYCIEI-VWLLVYGYPCNGSLDHN  108 (113)
Q Consensus        86 ~~~~~~-~~~lv~e~~~~g~L~~~  108 (113)
                      +++... ..++++||+++|+|.++
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEE
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHH
Confidence            999988 99999999999999988

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.35  E-value=1.9e-12  Score=85.30  Aligned_cols=89  Identities=16%  Similarity=0.157  Sum_probs=63.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe-----c-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-----I-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~-----~-~~~   94 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+..........+.+.+|+.++..++|+|++++++++..     . ..+
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~  133 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY  133 (458)
T ss_dssp             TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence            4567889999999999999865 57889999987543334566778999999999999999999999843     2 689


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++|++. |+|..++..
T Consensus       134 lv~e~~~-~~L~~~~~~  149 (458)
T 3rp9_A          134 VVLEIAD-SDFKKLFRT  149 (458)
T ss_dssp             EEECCCS-EEHHHHHHS
T ss_pred             EEEeccc-cchhhhccc
Confidence            9999875 678777654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.35  E-value=2.6e-12  Score=80.54  Aligned_cols=90  Identities=28%  Similarity=0.324  Sum_probs=73.6

Q ss_pred             HHhHhcCccccCCCceEEEEEe------CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--
Q 044522           21 IASTLGKTPRRGGFGAVYKGAL------RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--   91 (113)
                      ..+.+.+.||+|+||.||++.+      ..+..+++|.+..... ......+.+|+.++..+ +|+|++++++++...  
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            3455678999999999999974      2356899999876432 34556788999999998 789999999998876  


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+.+|+|.+++..
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~  125 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRS  125 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHT
T ss_pred             ceEEEEEcCCCCcHHHHHHh
Confidence            69999999999999998764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.35  E-value=3e-12  Score=78.98  Aligned_cols=90  Identities=24%  Similarity=0.263  Sum_probs=74.4

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|+..+..+.|+|++++++++... ..++++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            44567889999999999999875 588999999875321 011245678899999999999999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+++|.+++.
T Consensus        91 e~~~~~~L~~~l~  103 (276)
T 2h6d_A           91 EYVSGGELFDYIC  103 (276)
T ss_dssp             ECCCSCBHHHHHH
T ss_pred             eccCCCcHHHHHh
Confidence            9999999988764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.35  E-value=9.6e-13  Score=82.69  Aligned_cols=89  Identities=20%  Similarity=0.111  Sum_probs=72.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e----EE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V----WL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~----~~   94 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+..... .......+.+|+..+..++|+|++++++++... .    .+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            3567889999999999999864 578899999976432 234456788999999999999999999988765 2    49


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+++++|.+++.
T Consensus        93 lv~e~~~g~~L~~~l~  108 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVH  108 (311)
T ss_dssp             EEEECCCEEEHHHHHH
T ss_pred             EEEecCCCCCHHHHHH
Confidence            9999999999998764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.34  E-value=6e-12  Score=78.42  Aligned_cols=85  Identities=24%  Similarity=0.317  Sum_probs=65.9

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhh--CCCCccceeeeEEEec-----eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSC--AQHRSLVVLVGYCIEI-----VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~--~~h~~i~~l~~~~~~~-----~~~   94 (113)
                      .+.+.+.||+|+||.||++.+ .+..+++|.+....     ...+..|..++..  +.|+|++++++.+...     ..+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            455678899999999999987 47889999987542     2334445555544  7899999999986542     588


Q ss_pred             EEEecCCCCChhhhccCC
Q 044522           95 LVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~~  112 (113)
                      +++||+.+|+|.+++++.
T Consensus        83 lv~e~~~~g~L~~~l~~~  100 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLT  100 (301)
T ss_dssp             EEECCCTTCBHHHHHTTC
T ss_pred             EehhhccCCCHHHHHhhc
Confidence            999999999999988643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.34  E-value=1.8e-11  Score=77.03  Aligned_cols=89  Identities=20%  Similarity=0.112  Sum_probs=67.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHh-hCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILS-CAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~-~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+...............++..+. ...|+|++++++++... ..++++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            45567788999999999999975 5889999988654322334444455555444 44899999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+ +++|..++.
T Consensus       137 e~~-~~~L~~~~~  148 (311)
T 3p1a_A          137 ELC-GPSLQQHCE  148 (311)
T ss_dssp             ECC-CCBHHHHHH
T ss_pred             ecc-CCCHHHHHH
Confidence            999 567777654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.34  E-value=1.5e-12  Score=82.36  Aligned_cols=95  Identities=22%  Similarity=0.288  Sum_probs=71.2

Q ss_pred             chhHHHHhHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe
Q 044522           16 SPCKIIASTLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE   90 (113)
Q Consensus        16 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~   90 (113)
                      ...+...+.+.+.||+|+||.||++.+. .+.    .+++|.+..... ......+.+|+.++..++|+|++++++++..
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   88 (327)
T 3poz_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLT   88 (327)
T ss_dssp             EECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred             hhcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            3445556677889999999999999863 233    467887764321 2345678899999999999999999999988


Q ss_pred             ceEEEEEecCCCCChhhhccC
Q 044522           91 IVWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        91 ~~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ...++++|++.+|+|.+++.+
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~  109 (327)
T 3poz_A           89 STVQLITQLMPFGCLLDYVRE  109 (327)
T ss_dssp             SSEEEEEECCTTCBHHHHHHH
T ss_pred             CCeEEEEEecCCCcHHHHHHh
Confidence            777889999999999988753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.34  E-value=4.7e-12  Score=86.89  Aligned_cols=88  Identities=24%  Similarity=0.285  Sum_probs=72.0

Q ss_pred             HhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~   97 (113)
                      .+.+.+.||+|+||.||+|.+..    +..+++|.+..... ......+.+|+.++..++|+|++++++++.+...++++
T Consensus       391 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~  469 (656)
T 2j0j_A          391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM  469 (656)
T ss_dssp             GEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             cEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEE
Confidence            34567889999999999998632    45689998775432 34556788999999999999999999998555889999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+|+|.+++.
T Consensus       470 E~~~~g~L~~~l~  482 (656)
T 2j0j_A          470 ELCTLGELRSFLQ  482 (656)
T ss_dssp             ECCTTCBHHHHHH
T ss_pred             EcCCCCcHHHHHH
Confidence            9999999998875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.34  E-value=6.6e-12  Score=79.27  Aligned_cols=84  Identities=18%  Similarity=0.167  Sum_probs=70.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEe--c-eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIE--I-VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~--~-~~~lv   96 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+....     ...+.+|+.++..+. |+|++++.+++..  . ..+++
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            4456788999999999999864 57899999987543     245778999999986 9999999999987  4 78999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|..++.
T Consensus       112 ~e~~~~~~l~~~~~  125 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ  125 (330)
T ss_dssp             EECCCCCCHHHHGG
T ss_pred             EeccCchhHHHHHH
Confidence            99999999988764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.33  E-value=3.2e-12  Score=79.07  Aligned_cols=90  Identities=24%  Similarity=0.294  Sum_probs=73.4

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+...... ......+.+|+.++..+.|+|++++++++.+. ..++++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   88 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence            44566788999999999999875 4678999998754311 11235578899999999999999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+|+|..++.
T Consensus        89 e~~~~~~l~~~l~  101 (279)
T 3fdn_A           89 EYAPLGTVYRELQ  101 (279)
T ss_dssp             CCCTTEEHHHHHH
T ss_pred             ecCCCCcHHHHHH
Confidence            9999999987764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.33  E-value=4.4e-13  Score=83.59  Aligned_cols=89  Identities=16%  Similarity=0.101  Sum_probs=60.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+..+..+.|+|++++++.+... ..++++|
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   93 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK   93 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence            45567889999999999999853 578899998865431 23345678899999999999999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+.+++|.+++.
T Consensus        94 ~~~~~~L~~~l~  105 (303)
T 2vwi_A           94 LLSGGSVLDIIK  105 (303)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             hccCCchHHHHH
Confidence            999999988764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.33  E-value=1.1e-11  Score=79.16  Aligned_cols=86  Identities=26%  Similarity=0.265  Sum_probs=70.4

Q ss_pred             hHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +...+.||+|+||.||++.. ..+..+++|.+..... .......+.+|+.++..++|+|++++++++... ..++++||
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  135 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY  135 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence            34567899999999999986 4578899999875431 234456788999999999999999999999998 99999999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +. |++.+++
T Consensus       136 ~~-g~l~~~l  144 (348)
T 1u5q_A          136 CL-GSASDLL  144 (348)
T ss_dssp             CS-EEHHHHH
T ss_pred             CC-CCHHHHH
Confidence            98 5666654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.33  E-value=5.5e-12  Score=78.08  Aligned_cols=89  Identities=28%  Similarity=0.310  Sum_probs=72.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLV   96 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv   96 (113)
                      ..+.+.+.||+|+||.||++.+..    +..+++|.+..... ......+.+|+.++..++|+|++++++++.....+++
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v   90 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII   90 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence            445678899999999999998532    33589999876532 3456678899999999999999999999876677899


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+++|.+++.
T Consensus        91 ~e~~~~~~L~~~l~  104 (281)
T 3cc6_A           91 MELYPYGELGHYLE  104 (281)
T ss_dssp             EECCTTCBHHHHHH
T ss_pred             EecCCCCCHHHHHH
Confidence            99999999988774

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.33  E-value=1.2e-12  Score=86.09  Aligned_cols=89  Identities=21%  Similarity=0.185  Sum_probs=65.6

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||.+... .+..+|+|.+..... .......+.+|+.++..+.|+|++++++++... ..++|+|
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e  228 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME  228 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred             HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence            4556788999999999999864 578999999875321 123345577888899999999999999999998 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|..++.
T Consensus       229 ~~~~~~L~~~l~  240 (446)
T 4ejn_A          229 YANGGELFFHLS  240 (446)
T ss_dssp             CCSSCBHHHHHH
T ss_pred             eCCCCcHHHHHH
Confidence            999999987764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.32  E-value=5.1e-12  Score=79.31  Aligned_cols=91  Identities=29%  Similarity=0.426  Sum_probs=69.9

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e-
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V-   92 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~-   92 (113)
                      ....+.+.+.||+|+||.||++...    .+..+++|.+............+.+|+.++..++|+|++++++++... . 
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            3345567888999999999999753    244799999876543345567789999999999999999999998764 2 


Q ss_pred             ----EEEEEecCCCCChhhhc
Q 044522           93 ----WLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        93 ----~~lv~e~~~~g~L~~~l  109 (113)
                          .++++||+.+|+|..++
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l  132 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYL  132 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHH
T ss_pred             CCcccEEEEecccCCCHHHHH
Confidence                48999999999998887

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.32  E-value=1.6e-12  Score=82.86  Aligned_cols=89  Identities=19%  Similarity=0.153  Sum_probs=71.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+...... ......+.+|+.++..++|+|++++++++... ..++++
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            34567889999999999999964 5789999998753210 11134678899999999999999999999998 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+ +|+|.+++.
T Consensus        89 E~~-~g~l~~~l~  100 (336)
T 3h4j_B           89 EYA-GGELFDYIV  100 (336)
T ss_dssp             CCC-CEEHHHHHH
T ss_pred             ECC-CCcHHHHHH
Confidence            999 678877653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.32  E-value=2.7e-12  Score=80.57  Aligned_cols=85  Identities=33%  Similarity=0.416  Sum_probs=70.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecC
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYP  100 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~  100 (113)
                      ..+.+.+.||+|+||.||++.+. +..+++|.+...    .....+.+|+..+..+.|+|++++++.+.+ ..++++||+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~lv~e~~   81 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN-PVCLVMEYA   81 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-TTEEEEECC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CcEEEEEcC
Confidence            44566788999999999999875 678999998743    334568899999999999999999987654 478999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++.+
T Consensus        82 ~~~~L~~~l~~   92 (307)
T 2eva_A           82 EGGSLYNVLHG   92 (307)
T ss_dssp             TTCBHHHHHHC
T ss_pred             CCCCHHHHHhc
Confidence            99999998764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.32  E-value=7.3e-12  Score=79.24  Aligned_cols=85  Identities=20%  Similarity=0.184  Sum_probs=70.8

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      +.||+|+||.||++... .+..+++|.+............+.+|+.++..+ .|+|++++++++... ..++++||+.+|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~  114 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG  114 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence            78999999999999875 488999999876432123345678888888888 579999999999988 999999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++..
T Consensus       115 ~L~~~~~~  122 (327)
T 3lm5_A          115 EIFSLCLP  122 (327)
T ss_dssp             EGGGGGSS
T ss_pred             cHHHHHHH
Confidence            99988754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.32  E-value=1e-11  Score=77.81  Aligned_cols=87  Identities=21%  Similarity=0.148  Sum_probs=66.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEE-----------
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI-----------   89 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~-----------   89 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+.++..+.|+|++++++++.           
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3456788999999999999975 47889999987654  456677889999999999999999998862           


Q ss_pred             ---ec-eEEEEEecCCCCChhhhccC
Q 044522           90 ---EI-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        90 ---~~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                         .. ..++++||+. |+|.+++.+
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc
Confidence               33 7899999998 588887754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.32  E-value=5.3e-12  Score=78.57  Aligned_cols=86  Identities=21%  Similarity=0.365  Sum_probs=70.6

Q ss_pred             hcCccccCCCceEEEEEeC-C---CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEe
Q 044522           25 LGKTPRRGGFGAVYKGALR-D---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYG   98 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~-~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e   98 (113)
                      .++.||+|+||.||++.+. .   +..+++|.+..... ......+.+|+.++..++|+|++++++++...  ..++++|
T Consensus        25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             cCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence            4588999999999999852 2   23689998875432 45567788999999999999999999999876  4589999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|.+++.+
T Consensus       104 ~~~~~~L~~~~~~  116 (298)
T 3pls_A          104 YMCHGDLLQFIRS  116 (298)
T ss_dssp             CCTTCBHHHHHHC
T ss_pred             cccCCCHHHHHhc
Confidence            9999999998765

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.32  E-value=3.5e-12  Score=87.71  Aligned_cols=88  Identities=22%  Similarity=0.249  Sum_probs=69.6

Q ss_pred             HhHhcCccccCCCceEEEEEeC--CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e-----E
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR--DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V-----W   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~-----~   93 (113)
                      .+.+.+.||+|+||.||.+.+.  .+..+++|.+..... ......+.+|+.++..++|+|++++++++... .     .
T Consensus        81 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            3455678999999999999874  478899998865431 34556688999999999999999999999876 4     7


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++|+||+++++|.+++.
T Consensus       160 ~lv~E~~~g~~L~~~~~  176 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKG  176 (681)
T ss_dssp             EEEEECCCCEECC----
T ss_pred             EEEEEeCCCCcHHHHHh
Confidence            99999999999987764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.31  E-value=3.7e-12  Score=78.97  Aligned_cols=90  Identities=21%  Similarity=0.251  Sum_probs=73.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh-HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC-AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||.+... .+..+++|.+...... ......+.+|+.++..+.|+|++++++++... ..++++
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            45667889999999999999875 4778999998753210 11235678899999999999999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+++|+|.+++.
T Consensus        94 e~~~~~~L~~~l~  106 (284)
T 2vgo_A           94 EFAPRGELYKELQ  106 (284)
T ss_dssp             CCCTTEEHHHHHH
T ss_pred             EeCCCCcHHHHHH
Confidence            9999999988764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.31  E-value=2.4e-12  Score=82.55  Aligned_cols=91  Identities=18%  Similarity=0.147  Sum_probs=73.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCC-CcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~l   95 (113)
                      ...+.+.+.||+|+||.||.+.... +..+|+|.+..... .......+..|..++..+ .|++++++++.+... ..++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            3455667889999999999998754 67899999875421 112344567788888877 799999999999988 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ++||+++|+|..++.
T Consensus        99 v~E~~~gg~L~~~l~  113 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQ  113 (353)
T ss_dssp             EEECCCSCBHHHHHH
T ss_pred             EEeCCCCCcHHHHHH
Confidence            999999999998775

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.31  E-value=1.8e-11  Score=78.66  Aligned_cols=87  Identities=22%  Similarity=0.201  Sum_probs=71.3

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch--h----HHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEE
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA--C----AQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~--~----~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.||+|+||.||++... .+..+++|.++....  .    ......+.+|+.++..+ .|+|++++++++... ..+
T Consensus        97 ~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~  176 (365)
T 2y7j_A           97 DPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF  176 (365)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEE
T ss_pred             ccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEE
Confidence            34588999999999999975 588999999875421  0    11234577899999888 799999999999888 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+++|.+++.
T Consensus       177 lv~e~~~g~~L~~~l~  192 (365)
T 2y7j_A          177 LVFDLMRKGELFDYLT  192 (365)
T ss_dssp             EEECCCTTCBHHHHHH
T ss_pred             EEEEeCCCCcHHHHHH
Confidence            9999999999988764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.31  E-value=1.1e-11  Score=79.11  Aligned_cols=86  Identities=20%  Similarity=0.119  Sum_probs=70.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-----CCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-----HRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-----h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+...   ......+..|..++..+.     |+|++++++.+... ..+
T Consensus        36 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~  112 (360)
T 3llt_A           36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC  112 (360)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred             EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence            4456788999999999999874 5788999998753   344556677888888775     99999999999988 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+ +++|.+++..
T Consensus       113 lv~e~~-~~~L~~~~~~  128 (360)
T 3llt_A          113 LIFEPL-GPSLYEIITR  128 (360)
T ss_dssp             EEECCC-CCBHHHHHHH
T ss_pred             EEEcCC-CCCHHHHHHh
Confidence            999999 8899887653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.30  E-value=4.7e-12  Score=79.45  Aligned_cols=84  Identities=25%  Similarity=0.321  Sum_probs=67.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||.+... .+..+++|.+....    ....+.+|+.++..+.|+|++++++.+... ..++++||+
T Consensus        31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (314)
T 3com_A           31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC  106 (314)
T ss_dssp             EEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence            345678999999999999875 47899999987543    234577899999999999999999999988 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      .+++|.+++.
T Consensus       107 ~~~~L~~~~~  116 (314)
T 3com_A          107 GAGSVSDIIR  116 (314)
T ss_dssp             TTEEHHHHHH
T ss_pred             CCCCHHHHHH
Confidence            9999988764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.30  E-value=3.6e-12  Score=79.41  Aligned_cols=88  Identities=22%  Similarity=0.255  Sum_probs=68.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..+.|+|++++++++... ..++++||
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (299)
T 2r3i_A            4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   83 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence            3456778999999999999875 578999999875432122235678899999999999999999999988 99999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +. ++|.+++.
T Consensus        84 ~~-~~L~~~~~   93 (299)
T 2r3i_A           84 LH-QDLKKFMD   93 (299)
T ss_dssp             CS-EEHHHHHH
T ss_pred             cc-CCHHHHHH
Confidence            98 57877654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.30  E-value=2.6e-12  Score=81.72  Aligned_cols=91  Identities=19%  Similarity=0.138  Sum_probs=72.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH------HHHHHHHHHHHHHhhCCCCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA------QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~------~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.......      .....+.+|+.++..++|+|++++++++... .
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            34566789999999999999864 57889999987643101      1223466789999999999999999999988 9


Q ss_pred             EEEEEecCCCC-ChhhhccC
Q 044522           93 WLLVYGYPCNG-SLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g-~L~~~l~~  111 (113)
                      .++++||+..| +|..++.+
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~  123 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDR  123 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHT
T ss_pred             EEEEEEeCCCCccHHHHHHh
Confidence            99999998776 88887754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=4.4e-12  Score=81.55  Aligned_cols=88  Identities=18%  Similarity=0.125  Sum_probs=65.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~   93 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..++|+|++++++++...       ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  105 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF  105 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence            3456788999999999999874 588999999865433245566788999999999999999999998754       35


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+ +++|..++.
T Consensus       106 ~lv~e~~-~~~L~~~~~  121 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMK  121 (367)
T ss_dssp             EEEEECC-SEEHHHHHH
T ss_pred             EEEEecC-CCCHHHHHh
Confidence            9999999 778887764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.28  E-value=1.3e-11  Score=79.66  Aligned_cols=88  Identities=27%  Similarity=0.246  Sum_probs=63.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec---eEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI---VWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~---~~~lv   96 (113)
                      .+.+.+.||+|+||.||.+... .+..+|+|.+............+.+|+.++..+. |+|++++++++...   ..++|
T Consensus        10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv   89 (388)
T 3oz6_A           10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV   89 (388)
T ss_dssp             TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred             ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence            4556788999999999999864 5789999998654322455667888999999996 99999999998754   68999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+. |+|..+++
T Consensus        90 ~e~~~-~~L~~~~~  102 (388)
T 3oz6_A           90 FDYME-TDLHAVIR  102 (388)
T ss_dssp             EECCS-EEHHHHHH
T ss_pred             ecccC-cCHHHHHH
Confidence            99998 57777654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.28  E-value=4.7e-12  Score=79.50  Aligned_cols=92  Identities=22%  Similarity=0.109  Sum_probs=75.3

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC--CCccceeeeEEEec-eEEE
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ--HRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~--h~~i~~l~~~~~~~-~~~l   95 (113)
                      ....+.+.+.||+|+||.||++....+..+++|.+............+.+|+.++..+.  |+|++++++++... ..++
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  105 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence            33456678899999999999998777888999998765433556677889999998886  59999999999988 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      ++| +.+++|.+++.+
T Consensus       106 v~e-~~~~~L~~~l~~  120 (313)
T 3cek_A          106 VME-CGNIDLNSWLKK  120 (313)
T ss_dssp             EEC-CCSEEHHHHHHH
T ss_pred             EEe-cCCCcHHHHHHh
Confidence            999 667788887653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.28  E-value=7.6e-12  Score=80.20  Aligned_cols=82  Identities=15%  Similarity=0.196  Sum_probs=64.6

Q ss_pred             HhcCccccCCCceEEEEE------eCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC---CCccceeeeEEEec-eE
Q 044522           24 TLGKTPRRGGFGAVYKGA------LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ---HRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~------~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~---h~~i~~l~~~~~~~-~~   93 (113)
                      .+.+.||+|+||.||++.      ...+..+++|.+....  .   ..+..+...+..+.   |+|++.+++.+... ..
T Consensus        68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~  142 (365)
T 3e7e_A           68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--P---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS  142 (365)
T ss_dssp             EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--H---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred             EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--h---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence            345679999999999994      2347789999987654  2   23455555666554   89999999999988 99


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++|+||+.+|+|.+++.
T Consensus       143 ~lv~e~~~~g~L~~~l~  159 (365)
T 3e7e_A          143 VLVGELYSYGTLLNAIN  159 (365)
T ss_dssp             EEEECCCCSCBHHHHHH
T ss_pred             EEEEeccCCCcHHHHHH
Confidence            99999999999999875

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.27  E-value=2.7e-11  Score=78.77  Aligned_cols=78  Identities=18%  Similarity=0.081  Sum_probs=63.2

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHH-hhCCCCccceeeeEEEe----c-eEEEEEec
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEIL-SCAQHRSLVVLVGYCIE----I-VWLLVYGY   99 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~-~~~~h~~i~~l~~~~~~----~-~~~lv~e~   99 (113)
                      +.||+|+||.||.+... .+..+++|.+....       .+.+|+.++ +..+|+|++++++++..    . ..++|+||
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~  140 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC  140 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcch-------hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence            57999999999999875 57889999987432       344566655 45589999999998865    4 78999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++.+
T Consensus       141 ~~gg~L~~~l~~  152 (400)
T 1nxk_A          141 LDGGELFSRIQD  152 (400)
T ss_dssp             CCSEEHHHHHHC
T ss_pred             CCCCcHHHHHHH
Confidence            999999998865

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.26  E-value=2.3e-11  Score=75.44  Aligned_cols=88  Identities=18%  Similarity=0.095  Sum_probs=66.4

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+............+.++...+..+.|+|++++++++... ..++++|
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e   86 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME   86 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence            44567788999999999999874 578899999876432223333344555567888999999999999988 9999999


Q ss_pred             cCCCCChhhhc
Q 044522           99 YPCNGSLDHNL  109 (113)
Q Consensus        99 ~~~~g~L~~~l  109 (113)
                      |+++ +|.+++
T Consensus        87 ~~~~-~l~~~l   96 (290)
T 3fme_A           87 LMDT-SLDKFY   96 (290)
T ss_dssp             CCSE-EHHHHH
T ss_pred             hhcc-chHHHH
Confidence            9984 776554

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.26  E-value=2.8e-11  Score=74.75  Aligned_cols=84  Identities=21%  Similarity=0.250  Sum_probs=69.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe---------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE---------   90 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~---------   90 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+....      ..+.+|+.++..+.|+|++++++++..         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            34556788999999999999975 58899999987643      135578889999999999999998754         


Q ss_pred             -------c-eEEEEEecCCCCChhhhcc
Q 044522           91 -------I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 -------~-~~~lv~e~~~~g~L~~~l~  110 (113)
                             . ..++++||+++|+|.+++.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~  112 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIE  112 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHH
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHh
Confidence                   3 5899999999999998874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.26  E-value=1.9e-11  Score=77.40  Aligned_cols=85  Identities=27%  Similarity=0.341  Sum_probs=68.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhh--CCCCccceeeeEEEec-----eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSC--AQHRSLVVLVGYCIEI-----VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~--~~h~~i~~l~~~~~~~-----~~   93 (113)
                      ..+.+.+.||+|+||.||++... +..+++|.+....     ...+.+|..++..  +.|+|++++++++...     ..
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh-----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            45567889999999999999874 7889999987432     2345667777766  6899999999998764     58


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+|+|.+++.+
T Consensus       116 ~lv~e~~~~g~L~~~l~~  133 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNR  133 (342)
T ss_dssp             EEEECCCTTCBHHHHHHH
T ss_pred             EEEEeecCCCcHHHHHhc
Confidence            999999999999988753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.26  E-value=3.7e-13  Score=85.38  Aligned_cols=91  Identities=14%  Similarity=0.089  Sum_probs=67.6

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccch------hHHHHHHHHHHHHHHhhCC---------CCccce
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSA------CAQAAFQFISEDEILSCAQ---------HRSLVV   83 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~~~~~~---------h~~i~~   83 (113)
                      ....+.+.+.||+|+||.||++.. .+..+|+|.+.....      .......+.+|+.+++.+.         |+|+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            456677899999999999999987 578899999876421      0112355677777776664         888888


Q ss_pred             eeeEEE------------------------------ec-eEEEEEecCCCCChhhhcc
Q 044522           84 LVGYCI------------------------------EI-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        84 l~~~~~------------------------------~~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      +.+.+.                              .. ..++|+||+.+|++.+.+.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~  154 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR  154 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH
Confidence            777653                              15 8999999999997666554

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.26  E-value=1.6e-12  Score=82.17  Aligned_cols=91  Identities=25%  Similarity=0.223  Sum_probs=69.3

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWL   94 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~   94 (113)
                      ...+.+.+.||+|+||.||++.+. .+.    .+++|.+..... ......+.+|+..+..++|+|++++++++.....+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccE
Confidence            345566788999999999999864 233    377887654321 12223466788889999999999999988755889


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+|+|.+++..
T Consensus        91 ~v~e~~~~~~L~~~l~~  107 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQ  107 (325)
T ss_dssp             EEEECCTTCBSHHHHHS
T ss_pred             EEEEeCCCCCHHHHHHH
Confidence            99999999999988754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.26  E-value=1.8e-11  Score=80.23  Aligned_cols=89  Identities=18%  Similarity=0.141  Sum_probs=72.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~   94 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+............+.+|+.++..++|+|++++++++...      ..+
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            4567889999999999999875 477899999976433345667789999999999999999999988653      489


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +|+||+. |+|..++..
T Consensus       107 lv~e~~~-~~L~~~~~~  122 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKT  122 (432)
T ss_dssp             EEEECCS-EEHHHHHHS
T ss_pred             EEEecCC-cCHHHHHhc
Confidence            9999987 588887654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.24  E-value=7e-12  Score=79.33  Aligned_cols=84  Identities=19%  Similarity=0.089  Sum_probs=69.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+.....    ...+.+|+.++..+ .|+|++++++++... ..++++|
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            3456788999999999999864 578899999875431    12467888999999 899999999999988 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+ +++|.+++.
T Consensus        86 ~~-~~~L~~~~~   96 (330)
T 2izr_A           86 LL-GPSLEDLFD   96 (330)
T ss_dssp             CC-CCBHHHHHH
T ss_pred             eC-CCCHHHHHH
Confidence            99 899998875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.24  E-value=1.1e-11  Score=76.81  Aligned_cols=94  Identities=28%  Similarity=0.250  Sum_probs=67.6

Q ss_pred             hhHHHHhHhcCccccCCCceEEEEEeC--CCc--EEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec
Q 044522           17 PCKIIASTLGKTPRRGGFGAVYKGALR--DGQ--VVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI   91 (113)
Q Consensus        17 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~--~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~   91 (113)
                      ......+.+.+.||+|+||.||++.+.  .+.  .+++|.++.... .......+.+|+..+..+.|+|++++++++...
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP   93 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence            344556677899999999999999852  233  589998875421 124556788999999999999999999998877


Q ss_pred             eEEEEEecCCCCChhhhcc
Q 044522           92 VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~  110 (113)
                      ..++++||+.+++|.+++.
T Consensus        94 ~~~~v~e~~~~~~L~~~l~  112 (291)
T 1u46_A           94 PMKMVTELAPLGSLLDRLR  112 (291)
T ss_dssp             SCEEEEECCTTCBHHHHHH
T ss_pred             CceeeEecccCCCHHHHHH
Confidence            7889999999999988765

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.24  E-value=1.6e-11  Score=77.39  Aligned_cols=86  Identities=26%  Similarity=0.308  Sum_probs=70.9

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEe------c-e
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIE------I-V   92 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~------~-~   92 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+....   .....+.+|+..+..+ .|+|++++++++..      . .
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            4456788999999999999874 57889999987543   2234577888888888 79999999999876      4 7


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+.+|+|.+++.
T Consensus       102 ~~lv~e~~~~~~L~~~l~  119 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIK  119 (326)
T ss_dssp             EEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHH
Confidence            899999999999988875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.23  E-value=2.6e-11  Score=78.02  Aligned_cols=88  Identities=18%  Similarity=0.152  Sum_probs=71.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE------
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW------   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~------   93 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... ..      
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  122 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  122 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred             cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence            4456788999999999999865 578899999876543345567788999999999999999999999766 44      


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+. ++|...+.
T Consensus       123 ~lv~e~~~-~~l~~~~~  138 (371)
T 4exu_A          123 YLVMPFMQ-TDLQKIMG  138 (371)
T ss_dssp             EEEEECCC-EEHHHHTT
T ss_pred             EEEEcccc-ccHHHHhh
Confidence            99999998 57766553

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.23  E-value=2e-11  Score=80.80  Aligned_cols=86  Identities=17%  Similarity=0.079  Sum_probs=68.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~   94 (113)
                      +.+.+.||+|+||.||.+... .+..+|+|.+............+.+|+.++..++|+|++++++++...       ..+
T Consensus        64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~  143 (464)
T 3ttj_A           64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY  143 (464)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence            445688999999999999864 478899999976533345667788999999999999999999998643       469


Q ss_pred             EEEecCCCCChhhhc
Q 044522           95 LVYGYPCNGSLDHNL  109 (113)
Q Consensus        95 lv~e~~~~g~L~~~l  109 (113)
                      +|+||+.++ +...+
T Consensus       144 lv~E~~~~~-l~~~~  157 (464)
T 3ttj_A          144 LVMELMDAN-LCQVI  157 (464)
T ss_dssp             EEEECCSEE-HHHHH
T ss_pred             EEEeCCCCC-HHHHH
Confidence            999999865 54443

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.23  E-value=5.9e-11  Score=74.18  Aligned_cols=79  Identities=18%  Similarity=0.082  Sum_probs=64.2

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHH-hhCCCCccceeeeEEEe----c-eEEEEEe
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEIL-SCAQHRSLVVLVGYCIE----I-VWLLVYG   98 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~-~~~~h~~i~~l~~~~~~----~-~~~lv~e   98 (113)
                      .+.||+|+||.||.+... .+..+++|.+....       .+.+|+..+ ....|+|++++++++..    . ..++++|
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             CcccccCCCeEEEEEEEcCCCcEEEEEEecccH-------HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            477999999999999874 57899999987532       344566655 56689999999999876    5 7999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|.+++.+
T Consensus        96 ~~~~~~L~~~l~~  108 (299)
T 3m2w_A           96 CLDGGELFSRIQD  108 (299)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             ecCCCcHHHHHHh
Confidence            9999999988753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.23  E-value=3.3e-11  Score=76.88  Aligned_cols=88  Identities=18%  Similarity=0.168  Sum_probs=71.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-e------E
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-V------W   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~------~   93 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++... .      .
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  104 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  104 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence            3456788999999999999875 578899999876433244566788999999999999999999998765 3      4


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+. ++|..++.
T Consensus       105 ~lv~e~~~-~~l~~~~~  120 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMG  120 (353)
T ss_dssp             EEEEECCS-EEGGGTTT
T ss_pred             EEEecccc-CCHHHHhc
Confidence            99999998 57777654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=2.4e-11  Score=77.43  Aligned_cols=91  Identities=19%  Similarity=0.153  Sum_probs=67.7

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH---HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA---QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      ...+.+.+.||+|+||.||.+... .+..+++|.+.......   .....+.+|+.++..++|+|++++++++... ..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            345667889999999999999875 47899999987543101   1124577899999999999999999999888 999


Q ss_pred             EEEecCCCCChhhhccC
Q 044522           95 LVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~  111 (113)
                      +++||+.+ +|..++..
T Consensus        89 lv~e~~~~-~l~~~~~~  104 (346)
T 1ua2_A           89 LVFDFMET-DLEVIIKD  104 (346)
T ss_dssp             EEEECCSE-EHHHHHTT
T ss_pred             EEEEcCCC-CHHHHHHh
Confidence            99999986 77776654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.22  E-value=1.3e-12  Score=82.07  Aligned_cols=89  Identities=18%  Similarity=0.268  Sum_probs=71.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      ..+.+.+.||+|+||.||++....  .+++|.+............+.+|+.++..+.|+|++++++++... ..++++||
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~  110 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL  110 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred             HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence            345678999999999999998753  488888865432122234466788889999999999999999988 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+++|.+++.+
T Consensus       111 ~~~~~L~~~l~~  122 (319)
T 2y4i_B          111 CKGRTLYSVVRD  122 (319)
T ss_dssp             CCSEEHHHHTTS
T ss_pred             ccCCcHHHHHHh
Confidence            999999998865

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=5.2e-11  Score=75.24  Aligned_cols=85  Identities=27%  Similarity=0.354  Sum_probs=65.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHh--hCCCCccceeeeEEEec-----eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILS--CAQHRSLVVLVGYCIEI-----VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~--~~~h~~i~~l~~~~~~~-----~~   93 (113)
                      ..+.+.+.||+|+||.||++... +..+++|.+....   .  ..+..+..++.  .+.|+|++++++++...     ..
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---E--ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---H--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---c--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            34567889999999999999875 7889999987542   1  22333444443  34899999999988764     58


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+.+|+|.+++.+
T Consensus       111 ~lv~e~~~~g~L~~~l~~  128 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKS  128 (337)
T ss_dssp             EEEECCCTTCBHHHHHHH
T ss_pred             EEEEeccCCCcHHHHhhc
Confidence            899999999999988753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.22  E-value=3e-11  Score=76.98  Aligned_cols=90  Identities=24%  Similarity=0.294  Sum_probs=70.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--------
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--------   90 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--------   90 (113)
                      ...+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..+.|+|++++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            456677899999999999999974 58899999886543222234457789999999999999999999876        


Q ss_pred             c-eEEEEEecCCCCChhhhcc
Q 044522           91 I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      . ..++|+||+.+ ++...+.
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~  115 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLS  115 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHH
T ss_pred             CceEEEEEeccCC-CHHHHHh
Confidence            3 58899999985 5555443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.22  E-value=4.5e-11  Score=75.40  Aligned_cols=86  Identities=20%  Similarity=0.183  Sum_probs=69.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEE--------ec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCI--------EI   91 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~--------~~   91 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+....  ......+.+|+..+..+. |+|++++++++.        ..
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            4567789999999999999974 57899999886654  455667888999999885 999999999984        23


Q ss_pred             -eEEEEEecCCCCChhhhcc
Q 044522           92 -VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~  110 (113)
                       ..++++||+. |+|.+++.
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~  125 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLK  125 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHH
T ss_pred             ceEEEEEEecC-CCHHHHHH
Confidence             5899999996 67877654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.21  E-value=4.7e-11  Score=74.56  Aligned_cols=87  Identities=21%  Similarity=0.178  Sum_probs=67.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh--HHHHHHHHHHHHHHhhCCCCccceeeeEEE--ec-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC--AQAAFQFISEDEILSCAQHRSLVVLVGYCI--EI-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~--~~-~~~l   95 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+......  ......+.+|+.++..++|+|++++++++.  .. ..++
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM   85 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence            3567889999999999999864 5788999998754210  123466889999999999999999999984  33 7899


Q ss_pred             EEecCCCCChhhhc
Q 044522           96 VYGYPCNGSLDHNL  109 (113)
Q Consensus        96 v~e~~~~g~L~~~l  109 (113)
                      ++||+.++ +.+++
T Consensus        86 v~e~~~~~-l~~~~   98 (305)
T 2wtk_C           86 VMEYCVCG-MQEML   98 (305)
T ss_dssp             EEECCSEE-HHHHH
T ss_pred             EehhccCC-HHHHH
Confidence            99999876 54443

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.21  E-value=3.7e-11  Score=76.35  Aligned_cols=80  Identities=18%  Similarity=0.105  Sum_probs=62.2

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEEEEec
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLLVYGY   99 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~lv~e~   99 (113)
                      .+.||+|+||.||++... .+..+++|.+....   ....+   ....+..+.|+|++++++++..    . ..++++||
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEec
Confidence            456999999999999975 58899999987542   22222   2223566789999999999876    3 58999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++.+
T Consensus       108 ~~gg~L~~~l~~  119 (336)
T 3fhr_A          108 MEGGELFSRIQE  119 (336)
T ss_dssp             CTTEEHHHHHHT
T ss_pred             cCCCCHHHHHHh
Confidence            999999988764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.21  E-value=1.3e-11  Score=78.21  Aligned_cols=93  Identities=23%  Similarity=0.304  Sum_probs=72.9

Q ss_pred             hHHHHhHhcCccccCCCceEEEEEeC-CCc----EEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEece
Q 044522           18 CKIIASTLGKTPRRGGFGAVYKGALR-DGQ----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIV   92 (113)
Q Consensus        18 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~   92 (113)
                      .+...+.+.+.||+|+||.||++.+. .+.    .+++|.+..... ......+.+|+.++..++|+|++++++++....
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS-CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence            34455667889999999999999863 233    457777754321 234567889999999999999999999998777


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .+++++++.+|+|.+++..
T Consensus        91 ~~~v~~~~~~g~L~~~l~~  109 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVRE  109 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHH
T ss_pred             ceEEEEecCCCcHHHHHHh
Confidence            8889999999999988753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.21  E-value=3.5e-11  Score=76.92  Aligned_cols=88  Identities=19%  Similarity=0.197  Sum_probs=69.4

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccch---------hHHHHHHHHHHHHHHhhCCCCccceeeeEEEe---
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSA---------CAQAAFQFISEDEILSCAQHRSLVVLVGYCIE---   90 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~---------~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~---   90 (113)
                      +.+.+.||+|+||.||.+....+..+++|.+.....         .......+.+|+.++..+.|+|++++++++..   
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  103 (362)
T 3pg1_A           24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE  103 (362)
T ss_dssp             CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred             eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence            446788999999999999877788999998854221         12334678899999999999999999998853   


Q ss_pred             --c-eEEEEEecCCCCChhhhccC
Q 044522           91 --I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        91 --~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                        . ..++++||+. |+|..++..
T Consensus       104 ~~~~~~~lv~e~~~-~~l~~~~~~  126 (362)
T 3pg1_A          104 PAMHKLYLVTELMR-TDLAQVIHD  126 (362)
T ss_dssp             TTCCEEEEEEECCS-EEHHHHHHC
T ss_pred             CCcceEEEEEccCC-CCHHHHHHh
Confidence              2 5899999998 577776543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.21  E-value=2.9e-12  Score=80.97  Aligned_cols=86  Identities=23%  Similarity=0.258  Sum_probs=66.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..+.|+|++++++++... ..++++||+
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL   82 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence            456778999999999999875 578899999875431 11122345788999999999999999999988 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      . |+|..++.
T Consensus        83 ~-~~l~~~~~   91 (324)
T 3mtl_A           83 D-KDLKQYLD   91 (324)
T ss_dssp             S-EEHHHHHH
T ss_pred             c-cCHHHHHH
Confidence            8 47776654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.21  E-value=5.2e-11  Score=78.12  Aligned_cols=81  Identities=16%  Similarity=0.026  Sum_probs=65.6

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCC
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCN  102 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~  102 (113)
                      ..+.||+|+||.||......+..+|+|.+....     ...+.+|+.++..+ +|+|++++++.+... ..++++||+. 
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            467799999999976554568899999987532     23456788888765 899999999999888 9999999996 


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|.+++..
T Consensus        93 gsL~~~l~~  101 (434)
T 2rio_A           93 LNLQDLVES  101 (434)
T ss_dssp             EEHHHHHHT
T ss_pred             CCHHHHHhc
Confidence            689888764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.20  E-value=1.9e-11  Score=84.13  Aligned_cols=89  Identities=18%  Similarity=0.139  Sum_probs=70.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEe
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      +.+.+.||+|+||.||.+... .+..+|+|.+..... .......+..|..++..+ .|++++.+++++.+. ..++|+|
T Consensus       343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E  422 (674)
T 3pfq_A          343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  422 (674)
T ss_dssp             EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred             eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence            345678999999999999875 477899999875321 112334567788888777 799999999999888 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|+|..++.+
T Consensus       423 ~~~gg~L~~~l~~  435 (674)
T 3pfq_A          423 YVNGGDLMYHIQQ  435 (674)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             CcCCCcHHHHHHh
Confidence            9999999988753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=5.3e-12  Score=80.79  Aligned_cols=91  Identities=24%  Similarity=0.188  Sum_probs=71.4

Q ss_pred             HHHhHhcCccccCCCceEEEEEe----CCCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-
Q 044522           20 IIASTLGKTPRRGGFGAVYKGAL----RDGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-   91 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-   91 (113)
                      ...+.+.+.||+|+||.||++..    ..+..+++|.++....  .......+.+|+.++..+ .|+|++++++.+... 
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            34566788999999999999986    2578999998864321  012223455677888888 699999999999888 


Q ss_pred             eEEEEEecCCCCChhhhcc
Q 044522           92 VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~  110 (113)
                      ..++++||+.+|+|.+++.
T Consensus       133 ~~~lv~e~~~~~~L~~~l~  151 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLS  151 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHH
T ss_pred             eEEEEeecCCCCCHHHHHH
Confidence            9999999999999988765

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.19  E-value=1.2e-10  Score=73.44  Aligned_cols=87  Identities=17%  Similarity=0.189  Sum_probs=66.9

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHH-HHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDE-ILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~-~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... ......+..|.. ++..+.|+|++++++++... ..++++
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            34456788999999999999875 578899999976532 334445555555 67777999999999999988 999999


Q ss_pred             ecCCCCChhhhc
Q 044522           98 GYPCNGSLDHNL  109 (113)
Q Consensus        98 e~~~~g~L~~~l  109 (113)
                      ||+.+ +|.+++
T Consensus       101 e~~~~-~l~~~~  111 (327)
T 3aln_A          101 ELMST-SFDKFY  111 (327)
T ss_dssp             CCCSE-EHHHHH
T ss_pred             eecCC-ChHHHH
Confidence            99985 665554

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.19  E-value=1e-10  Score=75.26  Aligned_cols=88  Identities=16%  Similarity=0.051  Sum_probs=70.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~   93 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+............+.+|+.++..+.|+|++++++++...       ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  105 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV  105 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred             heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence            4556788999999999999864 578899999876433245566788999999999999999999998643       57


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+.+ +|.+.+.
T Consensus       106 ~lv~e~~~~-~l~~~~~  121 (371)
T 2xrw_A          106 YIVMELMDA-NLCQVIQ  121 (371)
T ss_dssp             EEEEECCSE-EHHHHHH
T ss_pred             EEEEEcCCC-CHHHHHh
Confidence            999999985 5666543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.18  E-value=5.5e-11  Score=76.53  Aligned_cols=89  Identities=18%  Similarity=0.082  Sum_probs=64.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~   93 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+............+.+|+.++..++|+|++++++++...       ..
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  109 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV  109 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence            4456788999999999999864 578899999875432245566788999999999999999999988542       57


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++|++ +++|..++..
T Consensus       110 ~lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X          110 YLVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             EEEEECC-CEECC-----
T ss_pred             EEEeccc-CCCHHHHHhc
Confidence            8999998 5788777653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.18  E-value=6.3e-12  Score=86.31  Aligned_cols=90  Identities=21%  Similarity=0.187  Sum_probs=73.3

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe------c-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE------I-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~------~-~   92 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..++|+|++++++++..      . .
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC-HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            45678899999999999999864 478899998875432 4556678899999999999999999988754      4 7


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+.+|+|.+++..
T Consensus        93 ~~LVmEy~~ggsL~~~L~~  111 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQ  111 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHS
T ss_pred             EEEEEEeCCCCCHHHHHHh
Confidence            8899999999999988764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.18  E-value=1.6e-11  Score=77.62  Aligned_cols=88  Identities=30%  Similarity=0.301  Sum_probs=64.0

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe-----c-eE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-----I-VW   93 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~-----~-~~   93 (113)
                      ...+.+.+.||+|+||.||++.. .+..+++|.+....   ........++..+..+.|+|++++++.+..     . ..
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            34566788999999999999976 47889999987543   111111233333445799999999875542     2 57


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++++||+++|+|.+++..
T Consensus        88 ~lv~e~~~~g~L~~~l~~  105 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSL  105 (336)
T ss_dssp             EEEECCCTTCBHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHhh
Confidence            899999999999988753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.16  E-value=2e-10  Score=72.05  Aligned_cols=81  Identities=20%  Similarity=0.163  Sum_probs=57.2

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...+.+.+.||+|+||.||++... .+..+++|.+............+..+..++..+.|+|++++++++... ..++++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            345556788999999999999975 578999999986543222333344445567788999999999999988 999999


Q ss_pred             ecC
Q 044522           98 GYP  100 (113)
Q Consensus        98 e~~  100 (113)
                      ||+
T Consensus       104 e~~  106 (318)
T 2dyl_A          104 ELM  106 (318)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            999

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.15  E-value=2.1e-11  Score=77.71  Aligned_cols=91  Identities=15%  Similarity=0.018  Sum_probs=64.5

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccchhHHH---------HHHHHHHHHHHhhCCCCccceeee
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSACAQA---------AFQFISEDEILSCAQHRSLVVLVG   86 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~~~~~---------~~~~~~e~~~~~~~~h~~i~~l~~   86 (113)
                      ...+.+.+.||+|+||.||++...    .+..+++|...........         ...+.+|+..+..+.|+|++++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            345667889999999999999874    4567899988764311111         123557778888999999999999


Q ss_pred             EEEe----c-eEEEEEecCCCCChhhhccC
Q 044522           87 YCIE----I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        87 ~~~~----~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ++..    . ..++++||+ +++|.+++.+
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~  144 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ  144 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBG
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHh
Confidence            9987    6 899999999 8999988764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=81.40  Aligned_cols=84  Identities=13%  Similarity=0.023  Sum_probs=65.9

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+...+.||+|+||.|+......+..+|+|.+.....     ....+|+.++..+ .|+|++++++.+.+. ..++++||
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            3456788999999997654445678999999865431     1245688888888 799999999999988 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +. |+|.+++..
T Consensus       100 ~~-g~L~~~l~~  110 (432)
T 3p23_A          100 CA-ATLQEYVEQ  110 (432)
T ss_dssp             CS-EEHHHHHHS
T ss_pred             CC-CCHHHHHHh
Confidence            97 588887754

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.15  E-value=7.2e-11  Score=76.69  Aligned_cols=79  Identities=23%  Similarity=0.305  Sum_probs=59.2

Q ss_pred             cCccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--c-eEEEEEec
Q 044522           26 GKTPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--I-VWLLVYGY   99 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--~-~~~lv~e~   99 (113)
                      +++||+|+||.||++...   .+..+++|.+.....    ...+.+|+.++..+.|+|++++++++..  . ..++++||
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence            668999999999999864   367899999875432    2356789999999999999999999965  4 89999999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +.+ +|.+++
T Consensus       102 ~~~-~l~~~~  110 (405)
T 3rgf_A          102 AEH-DLWHII  110 (405)
T ss_dssp             CSE-EHHHHH
T ss_pred             CCC-CHHHHH
Confidence            874 666554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.14  E-value=1.2e-10  Score=74.60  Aligned_cols=87  Identities=16%  Similarity=0.037  Sum_probs=70.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~   94 (113)
                      .+.+.+.||+|+||.||.+... .+..+++|.+..... ......+.+|+.++..+.|+|++++++++...      ..+
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            4567788999999999999864 577899999875432 34556788999999999999999999988643      589


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+. |+|.+++.
T Consensus       107 iv~e~~~-~~L~~~l~  121 (364)
T 3qyz_A          107 IVQDLME-TDLYKLLK  121 (364)
T ss_dssp             EEEECCS-EEHHHHHH
T ss_pred             EEEcccC-cCHHHHHH
Confidence            9999998 47877664

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.14  E-value=1e-11  Score=77.94  Aligned_cols=90  Identities=21%  Similarity=0.210  Sum_probs=64.8

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH----HHHHHHHHHHHHHhhC----CCCccceeeeEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA----QAAFQFISEDEILSCA----QHRSLVVLVGYCIEI   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~~~~~----~h~~i~~l~~~~~~~   91 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.......    .....+.+|+..+..+    .|+|++++++++...
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~  110 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ  110 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence            34567889999999999999864 57889999987543111    1222345677777777    899999999999888


Q ss_pred             -eEEEEEec-CCCCChhhhcc
Q 044522           92 -VWLLVYGY-PCNGSLDHNLC  110 (113)
Q Consensus        92 -~~~lv~e~-~~~g~L~~~l~  110 (113)
                       ..++++|+ +.+++|.+++.
T Consensus       111 ~~~~~v~e~~~~~~~L~~~l~  131 (312)
T 2iwi_A          111 EGFMLVLERPLPAQDLFDYIT  131 (312)
T ss_dssp             --CEEEEECCSSEEEHHHHHH
T ss_pred             CeEEEEEEecCCCCCHHHHHH
Confidence             88999999 78899988764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.13  E-value=1.4e-10  Score=73.81  Aligned_cols=87  Identities=16%  Similarity=0.243  Sum_probs=70.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe-----c-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE-----I-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~-----~-~~~   94 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+..... ......+.+|+.++..+.|+|++++++++..     . ..+
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   90 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY   90 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence            4556788999999999999875 578899999875432 3455668899999999999999999998764     2 689


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+. ++|..++.
T Consensus        91 lv~e~~~-~~L~~~~~  105 (353)
T 2b9h_A           91 IIQELMQ-TDLHRVIS  105 (353)
T ss_dssp             EEECCCS-EEHHHHHH
T ss_pred             EEEeccC-ccHHHHHh
Confidence            9999997 57777654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.13  E-value=2.8e-11  Score=76.19  Aligned_cols=89  Identities=22%  Similarity=0.247  Sum_probs=64.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC--CCcEEEEEEeeccchhHHHHHHHHHHHHHHhh---CCCCccceeeeEEE-----e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR--DGQVVAVKHHKVMSACAQAAFQFISEDEILSC---AQHRSLVVLVGYCI-----E   90 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~---~~h~~i~~l~~~~~-----~   90 (113)
                      ..+.+.+.||+|+||.||++...  .+..+++|.+............+.+|+.++..   +.|+|++++++++.     .
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   90 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   90 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence            34567888999999999999873  47789999886533111112234455555544   48999999999987     3


Q ss_pred             c-eEEEEEecCCCCChhhhcc
Q 044522           91 I-VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~l~  110 (113)
                      . ..++++||+. |+|.+++.
T Consensus        91 ~~~~~lv~e~~~-~~L~~~l~  110 (326)
T 1blx_A           91 ETKLTLVFEHVD-QDLTTYLD  110 (326)
T ss_dssp             EEEEEEEEECCS-CBHHHHHH
T ss_pred             CceEEEEEecCC-CCHHHHHH
Confidence            4 7899999998 58887764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.12  E-value=2.2e-11  Score=78.44  Aligned_cols=86  Identities=12%  Similarity=0.020  Sum_probs=63.9

Q ss_pred             HhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHH---HHHhhCCCCccceee-------eEEEec
Q 044522           24 TLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISED---EILSCAQHRSLVVLV-------GYCIEI   91 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~---~~~~~~~h~~i~~l~-------~~~~~~   91 (113)
                      .+.+.||+|+||.||++... .+..+++|.+..... .......+.+|+   ..+..+.|+|+++++       +++...
T Consensus        76 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~  155 (377)
T 3byv_A           76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP  155 (377)
T ss_dssp             EEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred             EEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence            34688999999999999864 588999999874321 134556788898   455566899999887       554433


Q ss_pred             -e-----------------EEEEEecCCCCChhhhcc
Q 044522           92 -V-----------------WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 -~-----------------~~lv~e~~~~g~L~~~l~  110 (113)
                       .                 .++++||+ +|+|.+++.
T Consensus       156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~  191 (377)
T 3byv_A          156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGE  191 (377)
T ss_dssp             TSCSEEEC------CEEESEEEEEECC-SEEHHHHHH
T ss_pred             CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHH
Confidence             2                 88999999 579988775

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.11  E-value=3.5e-10  Score=74.17  Aligned_cols=84  Identities=18%  Similarity=0.059  Sum_probs=66.0

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC------CCCccceeeeEEEec-eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA------QHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~------~h~~i~~l~~~~~~~-~~~   94 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.+...   ......+.+|+.++..+      .|+|++.+++.+... ..+
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            556788999999999999865 4788999999764   23344556666665544      677999999999988 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+. ++|.+++.
T Consensus       176 lv~e~~~-~~L~~~l~  190 (429)
T 3kvw_A          176 MTFELLS-MNLYELIK  190 (429)
T ss_dssp             EEECCCC-CBHHHHHH
T ss_pred             EEEeccC-CCHHHHHH
Confidence            9999996 57877664

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.11  E-value=1.5e-10  Score=74.57  Aligned_cols=84  Identities=15%  Similarity=0.056  Sum_probs=65.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC--------CCccceeeeEEE---
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ--------HRSLVVLVGYCI---   89 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~--------h~~i~~l~~~~~---   89 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+...   ......+.+|+.++..+.        |+|++++++.+.   
T Consensus        38 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             eEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            4556788999999999999864 5788999998754   344566778888887774        788999999887   


Q ss_pred             -ec-eEEEEEecCCCCChhhhc
Q 044522           90 -EI-VWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        90 -~~-~~~lv~e~~~~g~L~~~l  109 (113)
                       .. ..++++||+. +++..++
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~  135 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWI  135 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHH
T ss_pred             CCCceEEEEEeccC-ccHHHHH
Confidence             44 8999999994 5555544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.11  E-value=4.3e-10  Score=75.74  Aligned_cols=85  Identities=7%  Similarity=-0.021  Sum_probs=59.3

Q ss_pred             cCccccCCCceEEEEEeCCCcEEEEEEeeccchh------HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           26 GKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC------AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.||+|+||.||++.. .+..+++|........      ....+.+.+|+.++..++|+|++.+..+.... ..++++|
T Consensus       341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            56899999999999954 3567888875432210      11234578999999999999999665566666 8899999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++++|.+++.+
T Consensus       420 ~~~ggsL~~~l~~  432 (540)
T 3en9_A          420 YINGKLAKDVIED  432 (540)
T ss_dssp             CCCSEEHHHHSTT
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999988764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.11  E-value=9.4e-11  Score=72.91  Aligned_cols=84  Identities=23%  Similarity=0.203  Sum_probs=69.1

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++.. ..+..+++|.+....    ....+.+|+..+..+ .|++++.+++++... ..++++|
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            345678899999999999986 457889999886532    123466788888888 799999999999888 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+ +++|.+++.
T Consensus        87 ~~-~~~L~~~l~   97 (298)
T 1csn_A           87 LL-GPSLEDLLD   97 (298)
T ss_dssp             CC-CCBHHHHHH
T ss_pred             ec-CCCHHHHHH
Confidence            99 899998876

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.10  E-value=1.5e-10  Score=73.00  Aligned_cols=85  Identities=20%  Similarity=0.121  Sum_probs=67.2

Q ss_pred             HhHhcCccccCCCceEEEEEe-C-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCC------ccceeeeEEEec-e
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-R-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR------SLVVLVGYCIEI-V   92 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~------~i~~l~~~~~~~-~   92 (113)
                      .+.+.+.||+|+||.||++.. . .+..+++|.+...   ......+.+|+.++..+.|+      +++++++++... .
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            456678899999999999986 3 4778999998754   24445667777777666544      589999999888 9


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+ +++|.+++.
T Consensus        92 ~~lv~e~~-~~~l~~~l~  108 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIK  108 (339)
T ss_dssp             EEEEEECC-CCBHHHHHH
T ss_pred             EEEEEcCC-CCCHHHHHH
Confidence            99999999 788888765

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.09  E-value=1.5e-10  Score=74.66  Aligned_cols=63  Identities=27%  Similarity=0.285  Sum_probs=49.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE   90 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~   90 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+.....      ...+|+.++..++|+|++++++++..
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeee
Confidence            4567789999999999999864 588999998875431      12368889999999999999998843

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.07  E-value=3.3e-10  Score=72.60  Aligned_cols=89  Identities=13%  Similarity=0.071  Sum_probs=65.2

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHH---------HHHHHHHHHHhhCCCCccceeee
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAA---------FQFISEDEILSCAQHRSLVVLVG   86 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~---------~~~~~e~~~~~~~~h~~i~~l~~   86 (113)
                      .+.+.+.||+|+||.||++.+..      +..+++|.+..........         .....+...+..+.|+|++++++
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~  115 (364)
T 3op5_A           36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG  115 (364)
T ss_dssp             EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred             eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence            56678899999999999998643      4679999987654111111         12334556677889999999999


Q ss_pred             EEEec-----eEEEEEecCCCCChhhhccC
Q 044522           87 YCIEI-----VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        87 ~~~~~-----~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ++...     ..++++||+ +++|.+++..
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~  144 (364)
T 3op5_A          116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEA  144 (364)
T ss_dssp             EEEEEETTEEEEEEEEECE-EEEHHHHHHH
T ss_pred             eeeeccCCcceEEEEEeCC-CCCHHHHHHh
Confidence            88763     489999999 8999988753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.07  E-value=1e-10  Score=74.62  Aligned_cols=82  Identities=20%  Similarity=0.222  Sum_probs=53.0

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------   91 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------   91 (113)
                      ....+.+.+.||+|+||.||++... .+..+++|.+....   ........++..+..+.|+|++++++++...      
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            4455667899999999999999875 57889999886542   1122345566667778999999999998653      


Q ss_pred             --eEEEEEecCCCC
Q 044522           92 --VWLLVYGYPCNG  103 (113)
Q Consensus        92 --~~~lv~e~~~~g  103 (113)
                        ..++++||+.++
T Consensus        98 ~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           98 DIYLNVVMEYVPDT  111 (360)
T ss_dssp             CEEEEEEEECCSCB
T ss_pred             ceeEEEEeeccccc
Confidence              288999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.05  E-value=1.5e-09  Score=68.01  Aligned_cols=89  Identities=22%  Similarity=0.235  Sum_probs=63.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch---hHHHHHHHHHHHHHHhh---CCCCccceeeeEEEec---
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA---CAQAAFQFISEDEILSC---AQHRSLVVLVGYCIEI---   91 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~---~~h~~i~~l~~~~~~~---   91 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+.....   .......+.+|+..+..   +.|+|++++++++...   
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~   89 (308)
T 3g33_A           10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD   89 (308)
T ss_dssp             CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence            4566788999999999999864 578899999874321   00111234455555444   4699999999998764   


Q ss_pred             ---eEEEEEecCCCCChhhhccC
Q 044522           92 ---VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ---~~~lv~e~~~~g~L~~~l~~  111 (113)
                         ..++++|++. ++|.+++..
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~~~~  111 (308)
T 3g33_A           90 REIKVTLVFEHVD-QDLRTYLDK  111 (308)
T ss_dssp             SEEEEEEEEECCC-CBHHHHHHT
T ss_pred             CceeEEEEehhhh-cCHHHHHhh
Confidence               3789999997 588887654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.05  E-value=1.2e-10  Score=74.34  Aligned_cols=83  Identities=19%  Similarity=0.161  Sum_probs=65.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC---------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccce--------
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD---------GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV--------   83 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~---------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~--------   83 (113)
                      ..+.+.+.||+|+||.||++....         +..+++|.+....       .+.+|+.++..+.|+|+++        
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~-------~~~~E~~~l~~l~h~niv~~~~~~~~~  114 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG-------RLFNEQNFFQRAAKPLQVNKWKKLYST  114 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTS-------THHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccc-------hHHHHHHHHHHhcccchhhhhhhhccC
Confidence            456678899999999999998643         6789999987542       4667888888888888776        


Q ss_pred             -------eeeEEEe-c-eEEEEEecCCCCChhhhccC
Q 044522           84 -------LVGYCIE-I-VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        84 -------l~~~~~~-~-~~~lv~e~~~~g~L~~~l~~  111 (113)
                             +++++.. . ..++++||+ +++|.+++.+
T Consensus       115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~  150 (352)
T 2jii_A          115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDV  150 (352)
T ss_dssp             TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHH
T ss_pred             CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHh
Confidence                   5677766 4 899999999 8999988753

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.02  E-value=9.5e-10  Score=70.66  Aligned_cols=86  Identities=12%  Similarity=-0.067  Sum_probs=56.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHH---HHhhCCCCccceee-------eEEEe
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDE---ILSCAQHRSLVVLV-------GYCIE   90 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~---~~~~~~h~~i~~l~-------~~~~~   90 (113)
                      +.+.+.||+|+||.||++.+. .+..+|+|.+..... .......+.+|+.   .+.. .|+|+++++       +++..
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence            456788999999999999975 578899999987542 2344455667744   4455 799977643       34432


Q ss_pred             c------------------eEEEEEecCCCCChhhhcc
Q 044522           91 I------------------VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        91 ~------------------~~~lv~e~~~~g~L~~~l~  110 (113)
                      .                  ..++|+||+. |+|.+++.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~  179 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFS  179 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHH
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHH
Confidence            2                  2799999999 89998875

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.01  E-value=1e-09  Score=68.39  Aligned_cols=80  Identities=19%  Similarity=-0.005  Sum_probs=60.9

Q ss_pred             hcCccccCCCceEEEEEeCCCcEEEEEEeeccchhH----------------HHHHHHHHHHHHHhhCCCCccceeeeEE
Q 044522           25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACA----------------QAAFQFISEDEILSCAQHRSLVVLVGYC   88 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~----------------~~~~~~~~e~~~~~~~~h~~i~~l~~~~   88 (113)
                      +++.||+|+||.||.+....+..+++|.++......                .....+.+|+.++..+.  | +++.+.+
T Consensus        94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~  170 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY  170 (282)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred             ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence            348899999999999998668899999986432100                13456889999999988  4 6666655


Q ss_pred             EeceEEEEEecCCCCChhh
Q 044522           89 IEIVWLLVYGYPCNGSLDH  107 (113)
Q Consensus        89 ~~~~~~lv~e~~~~g~L~~  107 (113)
                      .....++++||+++|+|.+
T Consensus       171 ~~~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          171 AWEGNAVLMELIDAKELYR  189 (282)
T ss_dssp             EEETTEEEEECCCCEEGGG
T ss_pred             eccceEEEEEecCCCcHHH
Confidence            4456799999999999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.98  E-value=8.3e-10  Score=68.50  Aligned_cols=84  Identities=25%  Similarity=0.302  Sum_probs=64.0

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEE-Eec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC-IEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~-~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++.. ..+..+++|.+....    ....+.+|+.++..+.|++.+..+..+ ... ..++++|
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            456778899999999999986 457889999866432    223467788888889888777766655 445 8899999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+ +++|.+++.
T Consensus        86 ~~-~~~L~~~~~   96 (296)
T 4hgt_A           86 LL-GPSLEDLFN   96 (296)
T ss_dssp             CC-CCBHHHHHH
T ss_pred             cc-CCCHHHHHH
Confidence            99 889988875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.97  E-value=1.5e-09  Score=70.06  Aligned_cols=86  Identities=23%  Similarity=0.128  Sum_probs=65.7

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CC-----ccceeeeEEEec-eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HR-----SLVVLVGYCIEI-VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~-----~i~~l~~~~~~~-~~   93 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+...   ......+..|+.++..+. |+     +++.+.+.+... ..
T Consensus        55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            3455688999999999999875 5778999999754   234455666777666653 44     488999999888 99


Q ss_pred             EEEEecCCCCChhhhccC
Q 044522           94 LLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~  111 (113)
                      ++|+||+. |+|.+++..
T Consensus       132 ~lv~e~~~-~~L~~~l~~  148 (382)
T 2vx3_A          132 CLVFEMLS-YNLYDLLRN  148 (382)
T ss_dssp             EEEEECCC-CBHHHHHHH
T ss_pred             EEEEecCC-CCHHHHHhh
Confidence            99999996 488877653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.96  E-value=7.3e-10  Score=72.43  Aligned_cols=78  Identities=26%  Similarity=0.243  Sum_probs=60.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe------c-eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE------I-VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~------~-~~~   94 (113)
                      +.+.+.||+|+||.||++... .+..+++|.+.....      ...+|+.++..++|+|++++++++..      . ..+
T Consensus        56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            445688999999999999975 488999999875431      12368889999999999999988753      1 477


Q ss_pred             EEEecCCCCChhh
Q 044522           95 LVYGYPCNGSLDH  107 (113)
Q Consensus        95 lv~e~~~~g~L~~  107 (113)
                      +++||+++ ++..
T Consensus       130 lv~e~~~~-~l~~  141 (420)
T 1j1b_A          130 LVLDYVPE-TVYR  141 (420)
T ss_dssp             EEEECCCE-EHHH
T ss_pred             eehhcccc-cHHH
Confidence            99999986 4443

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.95  E-value=6.9e-10  Score=68.93  Aligned_cols=84  Identities=25%  Similarity=0.302  Sum_probs=65.5

Q ss_pred             HhHhcCccccCCCceEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEE-Eec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGAL-RDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC-IEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~-~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++.. ..+..+++|.+.....    ...+.+|+.++..+.|++.+..+..+ ... ..++++|
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            345678899999999999986 4588899999875432    12477888899999888776665555 444 8899999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+ +++|.+++.
T Consensus        86 ~~-~~~L~~~~~   96 (296)
T 3uzp_A           86 LL-GPSLEDLFN   96 (296)
T ss_dssp             CC-CCBHHHHHH
T ss_pred             ec-CCCHHHHHH
Confidence            99 889998875

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.95  E-value=1.2e-09  Score=70.84  Aligned_cols=77  Identities=25%  Similarity=0.230  Sum_probs=60.1

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~   94 (113)
                      .|.+.+.||+|+||.||.+....+..+++|.+.....      ...+|+.++..++|+|++++++++...       ..+
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            4567788999999999999986656688887754321      112688899999999999999988543       388


Q ss_pred             EEEecCCCCC
Q 044522           95 LVYGYPCNGS  104 (113)
Q Consensus        95 lv~e~~~~g~  104 (113)
                      +++||+.++.
T Consensus       115 lv~e~~~~~l  124 (394)
T 4e7w_A          115 LVLEYVPETV  124 (394)
T ss_dssp             EEEECCSEEH
T ss_pred             EEeeccCccH
Confidence            9999998653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.94  E-value=3.1e-10  Score=71.61  Aligned_cols=90  Identities=21%  Similarity=0.261  Sum_probs=69.1

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhH----HHHHHHHHHHHHHhhCC--CCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA----QAAFQFISEDEILSCAQ--HRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~~~~~~--h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+.+.||+|+||.||++... .+..+++|.+.......    .....+.+|+.++..+.  |+|++++++++... .
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            34567889999999999999864 57889999987542100    11233556778888875  59999999999988 9


Q ss_pred             EEEEEecCCC-CChhhhcc
Q 044522           93 WLLVYGYPCN-GSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~-g~L~~~l~  110 (113)
                      .++++|++.+ ++|.+++.
T Consensus       123 ~~lv~e~~~~~~~L~~~l~  141 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFIT  141 (320)
T ss_dssp             EEEEEECCSSEEEHHHHHH
T ss_pred             EEEEEEcCCCCccHHHHHh
Confidence            9999999876 78887764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.94  E-value=1.3e-09  Score=69.76  Aligned_cols=88  Identities=15%  Similarity=0.029  Sum_probs=68.7

Q ss_pred             HHHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-----------CCccceeee
Q 044522           19 KIIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-----------HRSLVVLVG   86 (113)
Q Consensus        19 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-----------h~~i~~l~~   86 (113)
                      +...+.+.+.||+|+||.||++... .+..+++|.+....   .....+.+|+.++..+.           |+|++++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            4456677899999999999999864 57889999987542   34455677777777664           789999998


Q ss_pred             EEEec-----eEEEEEecCCCCChhhhcc
Q 044522           87 YCIEI-----VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        87 ~~~~~-----~~~lv~e~~~~g~L~~~l~  110 (113)
                      .+...     ..++++|++ +++|.+++.
T Consensus        94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~  121 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVL-GENLLALIK  121 (373)
T ss_dssp             EEEEEETTEEEEEEEECCC-CEEHHHHHH
T ss_pred             HhhccCCCCceEEEEEecC-CCCHHHHHH
Confidence            88642     688999999 788888764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.92  E-value=2.2e-09  Score=68.13  Aligned_cols=86  Identities=13%  Similarity=0.015  Sum_probs=64.4

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-C-CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCc------cceeeeEEEec-
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-D-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRS------LVVLVGYCIEI-   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~------i~~l~~~~~~~-   91 (113)
                      ..+.+.+.||+|+||.||++... . +..+++|.++..   ......+.+|+.++..+.|++      ++.+.+++... 
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            34566788999999999999864 3 468999998754   244455677777777765544      78888888888 


Q ss_pred             eEEEEEecCCCCChhhhcc
Q 044522           92 VWLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~  110 (113)
                      ..++++||+ ++++.+++.
T Consensus        96 ~~~lv~e~~-~~~l~~~l~  113 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLK  113 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHH
T ss_pred             eEEEEEecc-CCChHHHHH
Confidence            999999999 456655543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.89  E-value=2.7e-09  Score=71.06  Aligned_cols=84  Identities=24%  Similarity=0.271  Sum_probs=64.5

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCC-ccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR-SLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~-~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++... .+..+++|.+.....    ...+..|+.++..+.|. ++..+..+.... ..++++|
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            3567889999999999999864 588999998775431    12467788888888764 455555555666 8899999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+ +++|.+++.
T Consensus        84 ~~-g~sL~~ll~   94 (483)
T 3sv0_A           84 LL-GPSLEDLFN   94 (483)
T ss_dssp             CC-CCBHHHHHH
T ss_pred             CC-CCCHHHHHH
Confidence            99 889998875

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.80  E-value=1.3e-08  Score=69.08  Aligned_cols=68  Identities=12%  Similarity=0.003  Sum_probs=55.8

Q ss_pred             CcEEEEEEeeccc--------hhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEEEEEecCCCCChhhhccCC
Q 044522           45 GQVVAVKHHKVMS--------ACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWLLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        45 ~~~~~ik~~~~~~--------~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~~l~~~  112 (113)
                      |..+++|.+....        ......+.+.+|+.+++.+ .|+|+++++++..+. ..||||||++|++|.++|.+.
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~  336 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAG  336 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTT
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhC
Confidence            5678889886431        1123456699999999999 699999999999999 999999999999999988753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.26  E-value=6.6e-07  Score=54.96  Aligned_cols=74  Identities=16%  Similarity=0.073  Sum_probs=50.3

Q ss_pred             hcCccccCCCceEEEEEe-CCCcE--EEEEEeeccchhH----------------------HHHHHHHHHHHHHhhCCCC
Q 044522           25 LGKTPRRGGFGAVYKGAL-RDGQV--VAVKHHKVMSACA----------------------QAAFQFISEDEILSCAQHR   79 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~-~~~~~--~~ik~~~~~~~~~----------------------~~~~~~~~e~~~~~~~~h~   79 (113)
                      +.+.||+|+||.||++.. ..+..  +|+|.++......                      .....+.+|...+..+.|+
T Consensus        51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~  130 (258)
T 1zth_A           51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA  130 (258)
T ss_dssp             EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence            457899999999999987 56788  9999875432100                      1123567888888888776


Q ss_pred             cc--ceeeeEEEeceEEEEEecCC
Q 044522           80 SL--VVLVGYCIEIVWLLVYGYPC  101 (113)
Q Consensus        80 ~i--~~l~~~~~~~~~~lv~e~~~  101 (113)
                      ++  +.++.   ....++||||+.
T Consensus       131 ~i~~p~~~~---~~~~~lVmE~~g  151 (258)
T 1zth_A          131 GVSVPQPYT---YMKNVLLMEFIG  151 (258)
T ss_dssp             TCCCCCEEE---EETTEEEEECCE
T ss_pred             CCCCCeEEE---cCCCEEEEEecC
Confidence            54  22332   125679999994

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.14  E-value=2.2e-07  Score=60.52  Aligned_cols=86  Identities=12%  Similarity=0.023  Sum_probs=51.2

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchh---------------HHHH-----HHHHHHHHHHhhCCCCccc
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC---------------AQAA-----FQFISEDEILSCAQHRSLV   82 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~---------------~~~~-----~~~~~e~~~~~~~~h~~i~   82 (113)
                      +.++..||.|++|.||.+....|..+|+|.++.....               ....     .....|...+..+.+..+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            4567889999999999999877899999987542100               0000     0112344445444333322


Q ss_pred             eeeeEEEeceEEEEEecCCCCChhhhc
Q 044522           83 VLVGYCIEIVWLLVYGYPCNGSLDHNL  109 (113)
Q Consensus        83 ~l~~~~~~~~~~lv~e~~~~g~L~~~l  109 (113)
                      .... +.....+++|||+.+++|..+.
T Consensus       177 vp~p-~~~~~~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          177 VPEP-IAQSRHTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             CCCE-EEEETTEEEEECCSCEEGGGCC
T ss_pred             CCee-eeccCceEEEEecCCccHhhhc
Confidence            1111 1112346899999988877654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.85  E-value=7.6e-06  Score=53.40  Aligned_cols=56  Identities=14%  Similarity=-0.030  Sum_probs=41.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQH   78 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h   78 (113)
                      +..++.||+|+||.||++.+. .+..+|+|.+..... .......+.+|+.++..+.|
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            345678999999999999964 588999999874331 12234668888888888876

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.41  E-value=0.00035  Score=42.61  Aligned_cols=83  Identities=8%  Similarity=-0.042  Sum_probs=59.0

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+...++.++.+.||+.... +..+++|..+...  ......+.+|..++..+. +..+.++++..... ..+++|||+
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~--~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRY--KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGG--TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCccc--CCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            334556777788889987643 5789999887521  011224667777777763 56677888888877 899999999


Q ss_pred             CCCChhhh
Q 044522          101 CNGSLDHN  108 (113)
Q Consensus       101 ~~g~L~~~  108 (113)
                      +|.++...
T Consensus        93 ~G~~l~~~  100 (263)
T 3tm0_A           93 DGVLCSEE  100 (263)
T ss_dssp             SSEEHHHH
T ss_pred             CCeehhhc
Confidence            99888764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.50  E-value=0.0036  Score=37.76  Aligned_cols=72  Identities=17%  Similarity=0.037  Sum_probs=49.0

Q ss_pred             ccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCc--cceeeeEEEec-eEEEEEecCCCCChh
Q 044522           30 RRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRS--LVVLVGYCIEI-VWLLVYGYPCNGSLD  106 (113)
Q Consensus        30 g~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~--i~~l~~~~~~~-~~~lv~e~~~~g~L~  106 (113)
                      +.|..+.||+....++..+++|......     ...+..|..++..+.+.+  +.++++..... ..++++||++|.++.
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            3555688998865556678899866431     123556666666664333  45677777766 789999999998774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.63  E-value=0.034  Score=35.43  Aligned_cols=78  Identities=10%  Similarity=0.121  Sum_probs=49.4

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEee--ccchhHHHHHHHHHHHHHHhhCC--CCccceeeeEEEec----eEEEEEe
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHK--VMSACAQAAFQFISEDEILSCAQ--HRSLVVLVGYCIEI----VWLLVYG   98 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~--~~~~~~~~~~~~~~e~~~~~~~~--h~~i~~l~~~~~~~----~~~lv~e   98 (113)
                      +.++.|.++.+|+.... +..+.+|...  .... ......+.+|..++..+.  +..+++++..+.+.    ..+++||
T Consensus        44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            34777888999987654 4567777765  3221 122335667888887775  34467778777654    3789999


Q ss_pred             cCCCCChh
Q 044522           99 YPCNGSLD  106 (113)
Q Consensus        99 ~~~~g~L~  106 (113)
                      |++|..+.
T Consensus       122 ~v~G~~l~  129 (359)
T 3dxp_A          122 FVSGRVLW  129 (359)
T ss_dssp             CCCCBCCC
T ss_pred             ecCCeecC
Confidence            99987763

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.45  E-value=0.022  Score=35.18  Aligned_cols=74  Identities=15%  Similarity=-0.021  Sum_probs=46.4

Q ss_pred             CccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCc---cceeeeEEEeceEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRS---LVVLVGYCIEIVWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~---i~~l~~~~~~~~~~lv~e~~~~g  103 (113)
                      +.+|.|..+.+|+....+|..+.+|..+...  ......+..|...+..+....   ++++++   ....++++||+..+
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~---~~~~~lv~e~l~~~   95 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAG---WDDRTLAMEWVDER   95 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEE---EETTEEEEECCCCC
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEe---ccCceEEEEeeccc
Confidence            3468888999999888888899999865432  111223556777776663221   233333   23346788998765


Q ss_pred             Ch
Q 044522          104 SL  105 (113)
Q Consensus       104 ~L  105 (113)
                      ..
T Consensus        96 ~~   97 (288)
T 3f7w_A           96 PP   97 (288)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=92.71  E-value=0.97  Score=27.29  Aligned_cols=67  Identities=13%  Similarity=-0.005  Sum_probs=45.3

Q ss_pred             eEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecCCCCChhh
Q 044522           36 AVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYPCNGSLDH  107 (113)
Q Consensus        36 ~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~  107 (113)
                      .+|+-... ++..+.+|..+.     .....+.+|...++.+. +--+.+++.++.+. ..+++||++++.++.+
T Consensus        40 ~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~  109 (272)
T 4gkh_A           40 TIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ  109 (272)
T ss_dssp             EEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred             eEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence            47765443 355678887653     23345667777777663 33356778888888 8999999999876554

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.39  E-value=0.015  Score=38.80  Aligned_cols=64  Identities=3%  Similarity=-0.013  Sum_probs=17.4

Q ss_pred             hcCccccCCCceEEEEEeCC-CcEEEE------EEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec
Q 044522           25 LGKTPRRGGFGAVYKGALRD-GQVVAV------KHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI   91 (113)
Q Consensus        25 ~~~~lg~g~~~~v~~~~~~~-~~~~~i------k~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~   91 (113)
                      +.+.+|   ||.||+|.+.. ...||+      |..............+.++..++....|+|+++.+++....
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~~  216 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT  216 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEEC
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEee
Confidence            345666   99999998753 345666      55544332233345677888888888999999988776544

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=91.00  E-value=1.9  Score=27.18  Aligned_cols=72  Identities=14%  Similarity=0.031  Sum_probs=49.2

Q ss_pred             ccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC---CCccceeeeEEEec-eEEEEEecCCCC
Q 044522           28 TPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ---HRSLVVLVGYCIEI-VWLLVYGYPCNG  103 (113)
Q Consensus        28 ~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~---h~~i~~l~~~~~~~-~~~lv~e~~~~g  103 (113)
                      .++.|....+|+-.. ++..+.+|......     ...+..|...+..+.   ...+++++...... ..++++||+++.
T Consensus        43 ~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~-----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           43 KLYSGEMNEIWLIND-EVQTVFVKINERSY-----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EECCSSSSEEEEEES-SSCEEEEEEEEGGG-----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EeCCccceeeeEEEE-CCCeEEEEeCCccc-----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            367788888887654 35677788766431     234566666666552   34566777777766 899999999987


Q ss_pred             Ch
Q 044522          104 SL  105 (113)
Q Consensus       104 ~L  105 (113)
                      .+
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=89.00  E-value=2.6  Score=26.23  Aligned_cols=71  Identities=13%  Similarity=-0.112  Sum_probs=45.7

Q ss_pred             cccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCC---ccceeeeEEEe-c-eEEEEEecCCCC
Q 044522           29 PRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR---SLVVLVGYCIE-I-VWLLVYGYPCNG  103 (113)
Q Consensus        29 lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~---~i~~l~~~~~~-~-~~~lv~e~~~~g  103 (113)
                      ++.|....+|..    +..+.+|....    ......+.+|..++..+.+.   .+..++..... . ..++++||++|.
T Consensus        27 l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           27 LGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             cCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            566666677765    34567776432    23445678888888887542   24455555542 2 678999999987


Q ss_pred             Chhh
Q 044522          104 SLDH  107 (113)
Q Consensus       104 ~L~~  107 (113)
                      .+..
T Consensus        99 ~l~~  102 (306)
T 3tdw_A           99 ILGE  102 (306)
T ss_dssp             ECHH
T ss_pred             ECch
Confidence            7654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=87.97  E-value=0.74  Score=29.69  Aligned_cols=75  Identities=8%  Similarity=-0.031  Sum_probs=42.2

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHH----HHHHHHHHHHHHhhCCC--C-ccceeeeEEEec-eEEEE
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQ----AAFQFISEDEILSCAQH--R-SLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~----~~~~~~~e~~~~~~~~h--~-~i~~l~~~~~~~-~~~lv   96 (113)
                      +.+|.|..+.+|+.... .+..+.+|....... ...    ....+..|..++..+..  + .+..++..  +. ..+++
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv  113 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  113 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence            45888999999998643 356788887653210 000    11234556666665421  2 23344432  34 66799


Q ss_pred             EecCCCC
Q 044522           97 YGYPCNG  103 (113)
Q Consensus        97 ~e~~~~g  103 (113)
                      +|++.+.
T Consensus       114 mE~l~g~  120 (397)
T 2olc_A          114 MEDLSHL  120 (397)
T ss_dssp             ECCCTTS
T ss_pred             EEeCCCc
Confidence            9999763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	113
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-15
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-15
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-15
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-14
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-13
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-13
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-12
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-11
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-06

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 1e-15
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G FG V  G  R    VA+   K++   + +  +FI E +++    H  LV L G C +
Sbjct: 14  TGQFGVVKYGKWRGQYDVAI---KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70

Query: 91  I-VWLLVYGYPCNGSLDHNLC 110
                ++  Y  NG L + L 
Sbjct: 71  QRPIFIITEYMANGCLLNYLR 91

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 1e-15
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G FG V+ G       VAVK    +   + +   F++E  ++   QH+ LV L     +
Sbjct: 23  AGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79

Query: 91  IVWLLVYGYPCNGSLDHNLCGPN 113
               ++  Y  NGSL   L  P+
Sbjct: 80  EPIYIITEYMENGSLVDFLKTPS 102

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (163), Expect = 3e-15
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
           T+G+    G FG VYKG       VAVK   V +   Q    F +E  +L   +H ++++
Sbjct: 11  TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68

Query: 84  LVGYCIEIVWLLVYGYPCNGSLDHNL 109
            +GY       +V  +    SL H+L
Sbjct: 69  FMGYSTAPQLAIVTQWCEGSSLYHHL 94

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 1e-14
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G FG V+ G   +   VA+   K +   A +   FI E E++    H  LV L G C+E
Sbjct: 15  SGQFGLVHLGYWLNKDKVAI---KTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71

Query: 91  -IVWLLVYGYPCNGSLDH 107
                LV+ +  +G L  
Sbjct: 72  QAPICLVFEFMEHGCLSD 89

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 1e-14
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 31  RGGFGAVYKGALRD---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGY 87
            G FG V KG  +     + VAVK  K  +       + ++E  ++    +  +V ++G 
Sbjct: 17  SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 76

Query: 88  CIEIVWLLVYGYPCNGSLDHNLC 110
           C    W+LV      G L+  L 
Sbjct: 77  CEAESWMLVMEMAELGPLNKYLQ 99

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 1e-13
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           +G FG V+ G       VA+   K +     +   F+ E +++   +H  LV L     E
Sbjct: 27  QGCFGEVWMGTWNGTTRVAI---KTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 83

Query: 91  IVWLLVYGYPCNGSLDH 107
               +V  Y   GSL  
Sbjct: 84  EPIYIVTEYMSKGSLLD 100

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 2e-13
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 24  TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVV 83
            L ++  +G FG V++G  R G+ VAVK   + S+  + ++   +E       +H +++ 
Sbjct: 6   VLQESIGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG 61

Query: 84  LVGYCIE-----IVWLLVYGYPCNGSLDHNL 109
            +    +         LV  Y  +GSL   L
Sbjct: 62  FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 7e-13
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 31  RGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGY 87
            G FG+V +G  R       VA+K  K  +  A    + + E +I+    +  +V L+G 
Sbjct: 19  CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLIGV 77

Query: 88  CIEIVWLLVYGYPCNGSLDHNLCGPN 113
           C     +LV      G L   L G  
Sbjct: 78  CQAEALMLVMEMAGGGPLHKFLVGKR 103

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-12
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 31  RGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
           RG FG VY G L D        AVK    ++   + + QF++E  I+    H +++ L+G
Sbjct: 37  RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLSLLG 95

Query: 87  YCIEI--VWLLVYGYPCNGSLDH 107
            C+      L+V  Y  +G L +
Sbjct: 96  ICLRSEGSPLVVLPYMKHGDLRN 118

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-12
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 24  TLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
            LG+    G FG V++G           VA+K  K  ++ +    +F+ E   +    H 
Sbjct: 10  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHP 68

Query: 80  SLVVLVGYCIEIVWLLVYGYPCNGSLDH 107
            +V L+G   E    ++      G L  
Sbjct: 69  HIVKLIGVITENPVWIIMELCTLGELRS 96

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 2e-12
 Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 31  RGGFGAVYKGALR----DGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
            G FG V +G           VAVK     + +  +A   FI E   +    HR+L+ L 
Sbjct: 18  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77

Query: 86  GYCIEIVWLLVYGYPCNGSLDHNLCGPN 113
           G  +     +V      GSL   L    
Sbjct: 78  GVVLTPPMKMVTELAPLGSLLDRLRKHQ 105

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 3e-12
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 31  RGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
           RG F  VYKG   +    VA    +          +F  E E+L   QH ++V       
Sbjct: 19  RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWE 78

Query: 90  EIV-----WLLVYGYPCNGSLDHNL 109
             V      +LV     +G+L   L
Sbjct: 79  STVKGKKCIVLVTELMTSGTLKTYL 103

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.6 bits (141), Expect = 4e-12
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 31  RGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +G VY+G  +     VAVK    +        +F+ E  ++   +H +LV L+G C 
Sbjct: 27  GGQYGEVYEGVWKKYSLTVAVK---TLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83

Query: 90  EIVWL-LVYGYPCNGSLDHNLCGPN 113
                 ++  +   G+L   L   N
Sbjct: 84  REPPFYIITEFMTYGNLLDYLRECN 108

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.7 bits (139), Expect = 7e-12
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
            G FGAVY    +R+ +VVA+K          +     I E   L   +H + +   G  
Sbjct: 25  HGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY 84

Query: 89  I-EIVWLLVYGYPCNGSLDHNL 109
           + E    LV  Y    + D   
Sbjct: 85  LREHTAWLVMEYCLGSASDLLE 106

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 57.2 bits (137), Expect = 1e-11
 Identities = 18/79 (22%), Positives = 29/79 (36%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
            G +G VYK     G+  A+K  ++           I E  IL   +H ++V L      
Sbjct: 12  EGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71

Query: 91  IVWLLVYGYPCNGSLDHNL 109
              L++     +  L   L
Sbjct: 72  KKRLVLVFEHLDQDLKKLL 90

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 2e-11
 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 31  RGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE 90
           +G FG V  G  R G  VAVK    +   A A   F++E  +++  +H +LV L+G  +E
Sbjct: 17  KGEFGDVMLGDYR-GNKVAVK---CIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIVE 71

Query: 91  --IVWLLVYGYPCNGSLDHNL 109
                 +V  Y   GSL   L
Sbjct: 72  EKGGLYIVTEYMAKGSLVDYL 92

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 3e-11
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
           +G  G VY    +  GQ VA++   +           I+E  ++   ++ ++V  +   +
Sbjct: 30  QGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 90  EIVWL-LVYGYPCNGSLDHNLC 110
               L +V  Y   GSL   + 
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVT 109

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 4e-11
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 9/94 (9%)

Query: 24  TLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILS-CA 76
           + GKT   G FG V +              VAVK  K  SA        +SE ++LS   
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLSYLG 84

Query: 77  QHRSLVVLVGYCIEI-VWLLVYGYPCNGSLDHNL 109
            H ++V L+G C      L++  Y C G L + L
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 9e-11
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVVLVGY 87
            G  G V+K + +  G V+A K   ++    + A   Q I E ++L       +V   G 
Sbjct: 16  AGNGGVVFKVSHKPSGLVMARK---LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72

Query: 88  CIEIVWL-LVYGYPCNGSLDHNLC 110
                 + +   +   GSLD  L 
Sbjct: 73  FYSDGEISICMEHMDGGSLDQVLK 96

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.8 bits (131), Expect = 9e-11
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 31  RGGFGAVYKGALR----DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
            G FG V  G L+        VA+K  K      +    F+SE  I+    H +++ L G
Sbjct: 36  AGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 94

Query: 87  YCIEIVWL-LVYGYPCNGSLDH 107
              +   + ++  +  NGSLD 
Sbjct: 95  VVTKSTPVMIITEFMENGSLDS 116

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 2e-10
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +G   K   + DG+++  K     S         +SE  +L   +H ++V      I
Sbjct: 14  TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII 73

Query: 90  E---IVWLLVYGYPCNGSLDHNL 109
           +       +V  Y   G L   +
Sbjct: 74  DRTNTTLYIVMEYCEGGDLASVI 96

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 2e-10
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 9/94 (9%)

Query: 24  TLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILS-CA 76
             GK    G FG V                VAVK  K   A +      +SE ++++   
Sbjct: 40  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLG 98

Query: 77  QHRSLVVLVGYCIEI-VWLLVYGYPCNGSLDHNL 109
            H ++V L+G C       L++ Y C G L + L
Sbjct: 99  SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 132

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 53.9 bits (129), Expect = 2e-10
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 31  RGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G FG V++      G   A K   VM+           E + +S  +H +LV L     
Sbjct: 36  TGAFGVVHRVTERATGNNFAAK--FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 93

Query: 90  EIVWL-LVYGYPCNGSLDHNLC 110
           +   + ++Y +   G L   + 
Sbjct: 94  DDNEMVMIYEFMSGGELFEKVA 115

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 2e-10
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 24  TLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ 77
           T+ +   +G FG VY+G  +          VA+K     +A  +   +F++E  ++    
Sbjct: 23  TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFN 81

Query: 78  HRSLVVLVGYCI-EIVWLLVYGYPCNGSLDHNL 109
              +V L+G        L++      G L   L
Sbjct: 82  CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 114

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 2e-10
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 6/85 (7%)

Query: 31  RGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
            G FG VYKG            VA+K  +  +   +A  + + E  +++   +  +  L+
Sbjct: 19  SGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCRLL 77

Query: 86  GYCIEIVWLLVYGYPCNGSLDHNLC 110
           G C+     L+      G L   + 
Sbjct: 78  GICLTSTVQLITQLMPFGCLLDYVR 102

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.5 bits (128), Expect = 3e-10
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 31  RGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G FG V++      G+V   K   + +      +   +E  I++   H  L+ L     
Sbjct: 39  SGAFGVVHRCVEKATGRVFVAK--FINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 96

Query: 90  EIVWL-LVYGYPCNGSLDHNLCGPN 113
           +   + L+  +   G L   +   +
Sbjct: 97  DKYEMVLILEFLSGGELFDRIAAED 121

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 53.2 bits (127), Expect = 3e-10
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 7/90 (7%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
            GG   V+    LR  + VAVK     ++       +F  E +  +   H ++V +    
Sbjct: 17  FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 76

Query: 89  IE-----IVWLLVYGYPCNGSLDHNLCGPN 113
                   +  +V  Y    +L   +    
Sbjct: 77  EAETPAGPLPYIVMEYVDGVTLRDIVHTEG 106

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 7e-10
 Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 3/90 (3%)

Query: 24  TLGKTPRRGGFGAVYKG-ALRDGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSL 81
             GK    G F  V     L   +  A+K   K              E +++S   H   
Sbjct: 11  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70

Query: 82  VVLVGYCIEIVWL-LVYGYPCNGSLDHNLC 110
           V L     +   L     Y  NG L   + 
Sbjct: 71  VKLYFTFQDDEKLYFGLSYAKNGELLKYIR 100

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 7e-10
 Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 31  RGGFGAVYKGALRD-GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G FG VYK   ++   + A K   + +   +    ++ E +IL+   H ++V L+    
Sbjct: 22  DGAFGKVYKAQNKETSVLAAAK--VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 79

Query: 90  EIVWL-LVYGYPCNGSLDHNLC 110
               L ++  +   G++D  + 
Sbjct: 80  YENNLWILIEFCAGGAVDAVML 101

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.2 bits (124), Expect = 7e-10
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 31  RGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL 84
            G FG V++             +VAVK  K   A A     F  E  +++   + ++V L
Sbjct: 23  EGAFGRVFQARAPGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMAEFDNPNIVKL 81

Query: 85  VGYCIEI-VWLLVYGYPCNGSLDHNL 109
           +G C       L++ Y   G L+  L
Sbjct: 82  LGVCAVGKPMCLLFEYMAYGDLNEFL 107

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.0 bits (124), Expect = 9e-10
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 6/85 (7%)

Query: 31  RGGFGAVYKGALRD-GQVVAVK----HHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
           RGGFG VY     D G++ A+K        M      A        ++S      +V + 
Sbjct: 14  RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 73

Query: 86  GYCIEIVWL-LVYGYPCNGSLDHNL 109
                   L  +      G L ++L
Sbjct: 74  YAFHTPDKLSFILDLMNGGDLHYHL 98

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 1e-09
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
           +G FG VY    +    ++A+K   K     A    Q   E EI S  +H +++ L GY 
Sbjct: 16  KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 75

Query: 89  IEIVWLLVYGYPC-NGSLDHNLCGPN 113
            +   + +       G++   L   +
Sbjct: 76  HDATRVYLILEYAPLGTVYRELQKLS 101

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.2 bits (122), Expect = 2e-09
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
            G FG V+   +  +G+  A+K   K +    +       E  +LS   H  ++ + G  
Sbjct: 14  TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF 73

Query: 89  IEIVWLLVYGYPCNGSLDHNLCGPN 113
            +   + +      G    +L   +
Sbjct: 74  QDAQQIFMIMDYIEGGELFSLLRKS 98

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 2e-09
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 31  RGGFGAVYKGALRDG---QVVAVKHHKVMSACAQAAFQFISEDEILS-CAQHRSLVVLVG 86
            G FG V K  ++        A+K  K   A       F  E E+L     H +++ L+G
Sbjct: 20  EGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIINLLG 78

Query: 87  YCIEIVWL-LVYGYPCNGSLDHNL 109
            C    +L L   Y  +G+L   L
Sbjct: 79  ACEHRGYLYLAIEYAPHGNLLDFL 102

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 24  TLGKTPRRGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLV 82
            LG+    G FG +Y G  +  G+ VA+K   V +   Q       E +I    Q    +
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ----LHIESKIYKMMQGGVGI 65

Query: 83  VLVGYCI-EIVWLLVYGYPCNGSLDH 107
             + +C  E  + ++       SL+ 
Sbjct: 66  PTIRWCGAEGDYNVMVMELLGPSLED 91

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 24  TLGKTPRRGGFGAVYKGALR--------DGQVVAVKHHKVMSACAQAAFQFISEDEILS- 74
            LGK    G FG V                  VAVK  K   A  +     ISE E++  
Sbjct: 16  VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKM 74

Query: 75  CAQHRSLVVLVGYCIEIVWL-LVYGYPCNGSLDHNL 109
             +H++++ L+G C +   L ++  Y   G+L   L
Sbjct: 75  IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (119), Expect = 4e-09
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 16/113 (14%)

Query: 10  MPPPLCSPCK--IIASTLGKTPRRGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQF 66
           +  P C         + +G    +G FG V+K    + GQ VA+K   + +         
Sbjct: 1   VECPFCDEVSKYEKLAKIG----QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA 56

Query: 67  ISEDEILSCAQHRSLVVLVGYCI---------EIVWLLVYGYPCNGSLDHNLC 110
           + E +IL   +H ++V L+  C          +    LV+ +  +        
Sbjct: 57  LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 109

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.6 bits (118), Expect = 6e-09
 Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G F  V      R  ++VA+K      A         +E  +L   +H ++V L     
Sbjct: 19  TGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE 77

Query: 90  EIVWL-LVYGYPCNGSLDHNL 109
               L L+      G L   +
Sbjct: 78  SGGHLYLIMQLVSGGELFDRI 98

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 6e-09
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 31  RGGFGAVYKGALRDGQ-----VVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLV 85
            G FG VYKG L+         VA+K  K      +    F+ E  I+    H +++ L 
Sbjct: 17  AGEFGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 75

Query: 86  GYCIEIVWL-LVYGYPCNGSLDH 107
           G   +   + ++  Y  NG+LD 
Sbjct: 76  GVISKYKPMMIITEYMENGALDK 98

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 9e-09
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +G VYK   +  G+VVA+K  ++ +         I E  +L    H ++V L+    
Sbjct: 12  EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71

Query: 90  EIVWLLVYGYPCNGSLDHNL 109
               L +     +  L   +
Sbjct: 72  TENKLYLVFEFLHQDLKKFM 91

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.0 bits (116), Expect = 1e-08
 Identities = 19/83 (22%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
            G FG V        G   A+K   K      +     ++E  IL       LV L    
Sbjct: 51  TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110

Query: 89  IEIVWL-LVYGYPCNGSLDHNLC 110
            +   L +V  Y   G +  +L 
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLR 133

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 1e-08
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)

Query: 21  IASTLGKTPRRGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHR 79
           IA  LG    RG FG V++       +    K    +            E  IL+ A+HR
Sbjct: 9   IAEDLG----RGEFGIVHRCVETSSKKTYMAK---FVKVKGTDQVLVKKEISILNIARHR 61

Query: 80  SLVVLVGYCIEIVWL-LVYGYPCNGSLDHNL 109
           +++ L      +  L +++ +     +   +
Sbjct: 62  NILHLHESFESMEELVMIFEFISGLDIFERI 92

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 1e-08
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 31  RGGFGAVYKGA-LRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +GAV      R G  VA+K           A +   E  +L   +H +++ L+    
Sbjct: 28  SGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFT 87

Query: 90  EIVWLLVYGYPC 101
               L  +    
Sbjct: 88  PDETLDDFTDFY 99

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 2e-08
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKH-HKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGY 87
           +G FG V+    +   Q  A+K   K +          + E  +LS A +H  L  +   
Sbjct: 12  KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT 71

Query: 88  CIEIVWL-LVYGYPCNGSLDHNL 109
                 L  V  Y   G L +++
Sbjct: 72  FQTKENLFFVMEYLNGGDLMYHI 94

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 2e-08
 Identities = 18/81 (22%), Positives = 25/81 (30%), Gaps = 3/81 (3%)

Query: 31  RGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +G V     R   + VAVK    M            E  I     H ++V   G+  
Sbjct: 15  EGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNHENVVKFYGHRR 73

Query: 90  -EIVWLLVYGYPCNGSLDHNL 109
              +  L   Y   G L   +
Sbjct: 74  EGNIQYLFLEYCSGGELFDRI 94

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 3e-08
 Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G  G V         + VA+K           A +   E  ++ C  H++++ L+    
Sbjct: 27  SGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86

Query: 90  EIVWLLVYGYPC 101
               L  +    
Sbjct: 87  PQKTLEEFQDVY 98

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 3e-08
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +G+V      + G  VAVK           A +   E  +L   +H +++ L+    
Sbjct: 28  SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 87

Query: 90  ------EIVWLLVYGYPCNGSLDH 107
                 E   + +  +     L++
Sbjct: 88  PARSLEEFNDVYLVTHLMGADLNN 111

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 9e-08
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 17/115 (14%)

Query: 1   MSNVTKSPPMPPPLCSPCKIIASTLGKTPRRGGFGAVYKGALRD-GQVVAVKHHKVMSAC 59
           ++ V  +P   P      + ++ T  K    G FG VY+  L D G++VA+K        
Sbjct: 3   VTTVVATPGQGP---DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----- 54

Query: 60  AQAAFQFISEDEILSCAQHRSLVVLVGYCI-------EIVWLLVYGYPCNGSLDH 107
            Q       E +I+    H ++V L  +         E+   LV  Y        
Sbjct: 55  -QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 108

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 9e-08
 Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 31  RGGFGAVYKG----ALRDGQVVAVK--HHKVMSACAQAAFQFISEDEILSCAQHRSLVVL 84
            G +G V+          G++ A+K      +   A+      +E ++L   +    +V 
Sbjct: 34  TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT 93

Query: 85  VGYCIEI--VWLLVYGYPCNGSLDHNLC 110
           + Y  +      L+  Y   G L  +L 
Sbjct: 94  LHYAFQTETKLHLILDYINGGELFTHLS 121

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-07
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 31 RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAF--QFISEDEILSCAQHRSLVVLVGY 87
           G +G V       +   VA+K    +S      +  + + E +IL   +H +++ +   
Sbjct: 18 EGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 74

Query: 88 CIE 90
             
Sbjct: 75 IRA 77

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 1e-07
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 2/75 (2%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKH-HKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYC 88
           +G FG V        G+  A+K   K +          ++E  +L   +H  L  L    
Sbjct: 15  KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74

Query: 89  IEIVWLLVYGYPCNG 103
                L       NG
Sbjct: 75  QTHDRLCFVMEYANG 89

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 1e-07
 Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G +G V+K       ++VA+K  ++           + E  +L   +H+++V L     
Sbjct: 12  EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH 71

Query: 90  -EIVWLLVYGYPCNGSLDHNLC 110
            +    LV+ +       +   
Sbjct: 72  SDKKLTLVFEFCDQDLKKYFDS 93

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 1e-07
 Identities = 19/93 (20%), Positives = 26/93 (27%), Gaps = 6/93 (6%)

Query: 24  TLGKTPRRGGFGAVYKG-ALRDGQVVAVK----HHKVMSACAQAAFQFISEDEILSCAQH 78
             G+    G F  V K      G   A K         S    +      E  IL   QH
Sbjct: 13  DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72

Query: 79  RSLVVLVGYCIEIVWL-LVYGYPCNGSLDHNLC 110
            +++ L         + L+      G L   L 
Sbjct: 73  PNVITLHEVYENKTDVILILELVAGGELFDFLA 105

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-07
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 11/94 (11%)

Query: 31  RGGFGAVYKG--ALRDGQVVAVKHHKVMSACAQAAFQFISEDEI---LSCAQHRSLVVLV 85
            G +G V+K       G+ VA+K  +V +         I E  +   L   +H ++V L 
Sbjct: 17  EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 76

Query: 86  GYCI------EIVWLLVYGYPCNGSLDHNLCGPN 113
             C       E    LV+ +       +    P 
Sbjct: 77  DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE 110

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 2e-07
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 24  TLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ 77
            LGK   RG FG V +            + VAVK  K  +  ++          ++    
Sbjct: 16  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 75

Query: 78  HRSLVVLVGYCIEI--VWLLVYGYPCNGSLDHNL 109
           H ++V L+G C +     +++  +   G+L   L
Sbjct: 76  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 109

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 3e-07
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 31  RGGFGAVYKGALR-DGQVVAVK---HHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVG 86
            G F  VYK   +   Q+VA+K         A        + E ++L    H +++ L+ 
Sbjct: 8   EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD 67

Query: 87  YCIEIVWL-LVYGYPCNGSLDH 107
                  + LV+ +        
Sbjct: 68  AFGHKSNISLVFDFMETDLEVI 89

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 44.8 bits (105), Expect = 4e-07
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G FG +++G  L + Q VA+K     S       Q   E          + +  V Y  
Sbjct: 15  EGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP----QLRDEYRTYKLLAGCTGIPNVYYFG 70

Query: 90  E--IVWLLVYGYPCNGSLDH 107
           +  +  +LV         D 
Sbjct: 71  QEGLHNVLVIDLLGPSLEDL 90

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 44.3 bits (104), Expect = 5e-07
 Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 10/89 (11%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAF-------QFISEDEILS-CAQHRSL 81
           RG    V +       +  AVK   V    + +A          + E +IL   + H ++
Sbjct: 13  RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 72

Query: 82  VVLVGYCIEIVWL-LVYGYPCNGSLDHNL 109
           + L        +  LV+     G L   L
Sbjct: 73  IQLKDTYETNTFFFLVFDLMKKGELFDYL 101

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 44.1 bits (103), Expect = 5e-07
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 10/82 (12%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILS-CAQHRSLVVLVGYC 88
           RG +  V++   + + + V VK  K +        +   E +IL       +++ L    
Sbjct: 45  RGKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLADIV 99

Query: 89  IEIV---WLLVYGYPCNGSLDH 107
            + V     LV+ +  N     
Sbjct: 100 KDPVSRTPALVFEHVNNTDFKQ 121

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 1e-06
 Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 5/79 (6%)

Query: 31  RGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI 89
            G F  V+    + +   VA+   K++            E ++L                
Sbjct: 23  WGHFSTVWLAKDMVNNTHVAM---KIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 79

Query: 90  E-IVWLLVYGYPCNGSLDH 107
             I+ LL +      +  H
Sbjct: 80  NHILKLLDHFNHKGPNGVH 98

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 8/73 (10%)

Query: 25 LGKTPRRGGFGAVYKGALRDGQVVAVKHHK--------VMSACAQAAFQFISEDEILSCA 76
          +GK    G   AV+           VK HK        V          F       +  
Sbjct: 4  IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63

Query: 77 QHRSLVVLVGYCI 89
          + R+L  L G  +
Sbjct: 64 EFRALQKLQGLAV 76

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 18/98 (18%)

Query: 19  KIIASTLGKTPRRGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAFQFISEDEILS-CA 76
           K+ +  LG     G  G V +    R  +  A+K         Q   +   E E+    +
Sbjct: 14  KVTSQVLG----LGINGKVLQIFNKRTQEKFALK-------MLQDCPKARREVELHWRAS 62

Query: 77  QHRSLVVLVGYCIEIV-----WLLVYGYPCNGSLDHNL 109
           Q   +V +V     +       L+V      G L   +
Sbjct: 63  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI 100

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 2e-06
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 24  TLGKTPRRGGFGAVYKG-ALRDGQVVAVKHHKVMSACAQAAF----QFISEDEILS--CA 76
            +G     GGFG+VY G  + D   VA+KH +              +   E  +L    +
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66

Query: 77  QHRSLVVLVGYCIE-IVWLLVYGYPCNGSLDHNL 109
               ++ L+ +      ++L+   P       + 
Sbjct: 67  GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 100

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	113
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.77
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.77
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.76
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.75
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.74
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.74
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.74
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.73
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.73
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.73
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.73
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.72
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.72
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.72
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.71
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.71
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.7
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.69
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.69
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.68
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.67
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.66
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.66
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.65
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.64
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.63
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.63
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.63
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.63
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.63
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.63
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.62
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.62
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.61
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.61
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.6
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.6
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.57
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.57
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.57
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.56
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.56
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.56
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.55
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.55
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.54
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.48
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.47
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.47
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.46
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.43
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.43
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.4
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.34
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.33
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.3
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.25
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.23
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.17
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.78
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.7
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	90.96
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	90.52

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.7e-19  Score=110.39  Aligned_cols=88  Identities=25%  Similarity=0.379  Sum_probs=75.8

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ...+.+.+.||+|+||.||+|.+. .+..+|+|.++...   ...+.+.+|+.++..++|+|++++++++.+. ..++++
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc---chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            345567889999999999999975 47889999987653   2345688999999999999999999999988 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+++|+|..++.
T Consensus        93 E~~~~g~l~~~l~  105 (287)
T d1opja_          93 EFMTYGNLLDYLR  105 (287)
T ss_dssp             ECCTTCBHHHHHH
T ss_pred             ecccCcchHHHhh
Confidence            9999999998875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.77  E-value=2.1e-18  Score=108.96  Aligned_cols=89  Identities=19%  Similarity=0.200  Sum_probs=77.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      ..|.+.+.||+|+||.||++... .+..+|+|.+....  ....+.+.+|+.++..++|+|++++++++.+. ..++|||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            35677899999999999999875 58889999997654  34556788999999999999999999999999 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|.+++.+
T Consensus       104 ~~~gg~L~~~l~~  116 (350)
T d1koaa2         104 FMSGGELFEKVAD  116 (350)
T ss_dssp             CCCSCBHHHHHTC
T ss_pred             cCCCCCHHHHHHh
Confidence            9999999988754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=8.8e-19  Score=106.88  Aligned_cols=86  Identities=29%  Similarity=0.363  Sum_probs=75.0

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.+.||+|+||.||+|.+.++..+|+|.++...   ...+.+.+|+.++..++|+|++++++++... ..++|+||++
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc---CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            35678899999999999998777889999987643   2235688999999999999999999999988 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|+|.+++.+
T Consensus        84 ~g~L~~~l~~   93 (263)
T d1sm2a_          84 HGCLSDYLRT   93 (263)
T ss_dssp             TCBHHHHHHT
T ss_pred             CCcHHHHhhc
Confidence            9999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.7e-18  Score=105.38  Aligned_cols=86  Identities=31%  Similarity=0.366  Sum_probs=74.9

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.++||+|+||.||+|.++++..+|+|.++....   ....+.+|+.++..++|+|+++++|++.+. ..++|+||+.
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~---~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS---CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC---CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            357889999999999999988788899999986542   234688999999999999999999999988 9999999999


Q ss_pred             CCChhhhccC
Q 044522          102 NGSLDHNLCG  111 (113)
Q Consensus       102 ~g~L~~~l~~  111 (113)
                      +|++..++..
T Consensus        83 ~g~l~~~~~~   92 (258)
T d1k2pa_          83 NGCLLNYLRE   92 (258)
T ss_dssp             TEEHHHHHHS
T ss_pred             CCcHHHhhhc
Confidence            9999887543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.74  E-value=8.7e-18  Score=106.19  Aligned_cols=88  Identities=17%  Similarity=0.220  Sum_probs=76.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .|.+.+.||+|+||.||++... .+..+|+|.++...  ......+.+|+.++..++|+|++++++++.+. .+++||||
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4667889999999999999974 58899999988654  34455678999999999999999999999998 99999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +.+|+|.+++..
T Consensus       108 ~~gg~L~~~~~~  119 (352)
T d1koba_         108 LSGGELFDRIAA  119 (352)
T ss_dssp             CCCCBHHHHTTC
T ss_pred             CCCChHHHHHHh
Confidence            999999887654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.5e-18  Score=104.68  Aligned_cols=90  Identities=23%  Similarity=0.184  Sum_probs=74.2

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.++.... ....+.+.+|+.+++.++|||++++++++.+. ..++||||
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            3556789999999999999975 588999999876432 23345688999999999999999999999999 99999999


Q ss_pred             CCCCChhhhccCC
Q 044522          100 PCNGSLDHNLCGP  112 (113)
Q Consensus       100 ~~~g~L~~~l~~~  112 (113)
                      +++|+|.+++.+.
T Consensus        85 ~~gg~L~~~l~~~   97 (271)
T d1nvra_          85 CSGGELFDRIEPD   97 (271)
T ss_dssp             CTTEEGGGGSBTT
T ss_pred             cCCCcHHHHHhcC
Confidence            9999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-17  Score=102.98  Aligned_cols=88  Identities=25%  Similarity=0.352  Sum_probs=72.6

Q ss_pred             hHhcC-ccccCCCceEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEe
Q 044522           23 STLGK-TPRRGGFGAVYKGALR---DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYG   98 (113)
Q Consensus        23 ~~~~~-~lg~g~~~~v~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e   98 (113)
                      ..+.+ +||+|+||.||+|.++   .+..||+|.++.... ....+.+.+|+.++..++|||++++++++.++..++|||
T Consensus        10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE   88 (285)
T d1u59a_          10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME   88 (285)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC-HHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEE
Confidence            33455 4999999999999864   245799999876432 455677999999999999999999999987668899999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|.+++..
T Consensus        89 ~~~~g~L~~~l~~  101 (285)
T d1u59a_          89 MAGGGPLHKFLVG  101 (285)
T ss_dssp             CCTTEEHHHHHTT
T ss_pred             eCCCCcHHHHhhc
Confidence            9999999998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.8e-18  Score=105.10  Aligned_cols=88  Identities=28%  Similarity=0.280  Sum_probs=74.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecC
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYP  100 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~  100 (113)
                      ..+.+.+.||+|+||.||+|.+.++..||+|.++...   ...+.+.+|+.++..++|+|++++++++.++..++|+||+
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~   89 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM   89 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc---CCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeC
Confidence            4556788899999999999998777889999987643   2335689999999999999999999988666788999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|.+++..
T Consensus        90 ~~g~L~~~~~~  100 (272)
T d1qpca_          90 ENGSLVDFLKT  100 (272)
T ss_dssp             TTCBHHHHTTS
T ss_pred             CCCcHHHHHhh
Confidence            99999887653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.4e-17  Score=104.04  Aligned_cols=86  Identities=17%  Similarity=0.214  Sum_probs=74.9

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      |.+.+.||+|+||.||++... .+..+|+|.++...   .....+.+|+.++..++|+|++++++++.+. ..++||||+
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            456789999999999999975 57889999998654   3334577999999999999999999999998 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++.+
T Consensus        84 ~gg~L~~~i~~   94 (321)
T d1tkia_          84 SGLDIFERINT   94 (321)
T ss_dssp             CCCBHHHHHTS
T ss_pred             CCCcHHHHHHh
Confidence            99999998864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.2e-18  Score=104.16  Aligned_cols=85  Identities=26%  Similarity=0.356  Sum_probs=68.4

Q ss_pred             CccccCCCceEEEEEeCC---CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCCC
Q 044522           27 KTPRRGGFGAVYKGALRD---GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCNG  103 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~g  103 (113)
                      ++||+|+||.||+|.+..   +..+|+|.++.........+.+.+|+.++..++|||++++++++..+..++|+||+++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            469999999999998642   45799999875432234456799999999999999999999998766778999999999


Q ss_pred             ChhhhccC
Q 044522          104 SLDHNLCG  111 (113)
Q Consensus       104 ~L~~~l~~  111 (113)
                      +|.+++++
T Consensus        93 ~L~~~l~~  100 (277)
T d1xbba_          93 PLNKYLQQ  100 (277)
T ss_dssp             EHHHHHHH
T ss_pred             cHHHHHhh
Confidence            99988754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.9e-18  Score=103.55  Aligned_cols=89  Identities=20%  Similarity=0.215  Sum_probs=75.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec---eEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI---VWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~---~~~lv~   97 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+............+.+|+.+++.++|||++++++++.+.   .++++|
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivm   84 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   84 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEE
Confidence            4556788999999999999875 578999999876544345566788999999999999999999998653   689999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+++|+|.+++.
T Consensus        85 Ey~~~g~L~~~i~   97 (269)
T d2java1          85 EYCEGGDLASVIT   97 (269)
T ss_dssp             ECCTTEEHHHHHH
T ss_pred             ecCCCCcHHHHHH
Confidence            9999999998764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.2e-18  Score=105.08  Aligned_cols=87  Identities=30%  Similarity=0.394  Sum_probs=73.8

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEecCCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGYPCN  102 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~~~~  102 (113)
                      +.+.+.||+|+||.||+|.+.  ..+|+|.++.........+.+.+|+.++..++|+|++++++++..+..++++||+++
T Consensus        10 ~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~   87 (276)
T d1uwha_          10 ITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEG   87 (276)
T ss_dssp             CCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCE
T ss_pred             EEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCCC
Confidence            456889999999999999864  359999987654334566789999999999999999999998866688999999999


Q ss_pred             CChhhhccC
Q 044522          103 GSLDHNLCG  111 (113)
Q Consensus       103 g~L~~~l~~  111 (113)
                      |+|.+++..
T Consensus        88 g~L~~~l~~   96 (276)
T d1uwha_          88 SSLYHHLHI   96 (276)
T ss_dssp             EEHHHHHHT
T ss_pred             CCHHHHHhh
Confidence            999998854

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.9e-17  Score=101.29  Aligned_cols=89  Identities=24%  Similarity=0.195  Sum_probs=74.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe----c-eEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE----I-VWLLV   96 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~----~-~~~lv   96 (113)
                      +.+.++||+|+||.||++... .+..+|+|.+............+.+|+.++..++|||++++++++.+    . .++++
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            356778999999999999975 47789999987654334556678999999999999999999999865    3 68999


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      |||+++|+|.+++.+
T Consensus        91 mE~~~~g~L~~~l~~  105 (270)
T d1t4ha_          91 TELMTSGTLKTYLKR  105 (270)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EeCCCCCcHHHHHhc
Confidence            999999999988753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=6.5e-18  Score=105.05  Aligned_cols=89  Identities=16%  Similarity=0.119  Sum_probs=71.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.+..... ......+.+|+.++..++|||++++++++.+. ..+++|||+
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            567889999999999999875 578899999875432 22334577899999999999999999999998 999999999


Q ss_pred             CCCChhhhccCC
Q 044522          101 CNGSLDHNLCGP  112 (113)
Q Consensus       101 ~~g~L~~~l~~~  112 (113)
                      ++|+|.+++.+.
T Consensus        90 ~gg~L~~~l~~~  101 (307)
T d1a06a_          90 SGGELFDRIVEK  101 (307)
T ss_dssp             CSCBHHHHHHTC
T ss_pred             CCCcHHHhhhcc
Confidence            999999988653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=9.6e-18  Score=103.69  Aligned_cols=87  Identities=20%  Similarity=0.192  Sum_probs=74.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      |.+.+.||+|+||.||++... .+..+|+|.+....  ....+.+.+|+.+++.++|||++++++++.+. ..++||||+
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc--ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            566788999999999999864 58899999987543  22345688999999999999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      ++|+|..++.+
T Consensus       100 ~gg~L~~~~~~  110 (293)
T d1yhwa1         100 AGGSLTDVVTE  110 (293)
T ss_dssp             TTCBHHHHHHH
T ss_pred             CCCcHHHHhhc
Confidence            99999987653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=9.7e-18  Score=103.92  Aligned_cols=88  Identities=26%  Similarity=0.330  Sum_probs=73.0

Q ss_pred             hHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      +.+.+.||+|+||.||+|.+..    ...+++|.+..... ....+.+.+|+.+++.++|||++++++++... ..++++
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~  106 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT  106 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC-HHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            3456789999999999998642    23588888765432 45566799999999999999999999999888 999999


Q ss_pred             ecCCCCChhhhccC
Q 044522           98 GYPCNGSLDHNLCG  111 (113)
Q Consensus        98 e~~~~g~L~~~l~~  111 (113)
                      ||+++|+|.+++..
T Consensus       107 Ey~~~g~L~~~~~~  120 (299)
T d1jpaa_         107 EFMENGSLDSFLRQ  120 (299)
T ss_dssp             ECCTTEEHHHHHHT
T ss_pred             EecCCCcceeeecc
Confidence            99999999987664

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-17  Score=102.74  Aligned_cols=90  Identities=21%  Similarity=0.136  Sum_probs=75.6

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh----HHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC----AQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .|.+.+.||+|+||.||++... .+..+|+|.+......    ......+.+|+.++..++|+|++++++++.+. ..++
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3567899999999999999974 5889999998753210    11246688999999999999999999999999 9999


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      |+||+++|+|.+++.+
T Consensus        91 v~E~~~gg~L~~~i~~  106 (293)
T d1jksa_          91 ILELVAGGELFDFLAE  106 (293)
T ss_dssp             EEECCCSCBHHHHHHH
T ss_pred             EEEcCCCccccchhcc
Confidence            9999999999988753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7e-18  Score=104.09  Aligned_cols=86  Identities=20%  Similarity=0.264  Sum_probs=74.4

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...  ....+.+.+|+.+++.++|||++++++++.+. ..++||||+
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            455778999999999999975 57889999987654  34456788999999999999999999999998 999999999


Q ss_pred             CCCChhhhcc
Q 044522          101 CNGSLDHNLC  110 (113)
Q Consensus       101 ~~g~L~~~l~  110 (113)
                      ++|+|..++.
T Consensus        92 ~~g~L~~~~~  101 (288)
T d2jfla1          92 AGGAVDAVML  101 (288)
T ss_dssp             TTEEHHHHHH
T ss_pred             CCCcHHHHHH
Confidence            9999988764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=9.1e-18  Score=104.95  Aligned_cols=88  Identities=22%  Similarity=0.110  Sum_probs=75.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++.... ......+.+|+.+++.++|||++++++++.+. ..++|+||+
T Consensus         8 y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~   86 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   86 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC-TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            445688999999999999975 578899999876432 33446788999999999999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .+|+|.+++.+
T Consensus        87 ~gg~L~~~l~~   97 (322)
T d1s9ja_          87 DGGSLDQVLKK   97 (322)
T ss_dssp             TTEEHHHHHHH
T ss_pred             CCCcHHHHHhh
Confidence            99999988753

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.6e-17  Score=99.74  Aligned_cols=89  Identities=25%  Similarity=0.308  Sum_probs=74.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+..... .......+.+|+.++..++|||++++++++.+. ..++|+|
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE   86 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   86 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence            4567789999999999999975 578899999875331 112245678899999999999999999999999 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|.+++.
T Consensus        87 y~~~g~L~~~l~   98 (263)
T d2j4za1          87 YAPLGTVYRELQ   98 (263)
T ss_dssp             CCTTCBHHHHHH
T ss_pred             ecCCCcHHHHHh
Confidence            999999988875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.7e-17  Score=101.30  Aligned_cols=88  Identities=26%  Similarity=0.278  Sum_probs=74.9

Q ss_pred             HHHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEEec
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVYGY   99 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~e~   99 (113)
                      ...+.+++.||+|+||.||+|.+..+..+|+|.++...   .....+.+|+.++..++|+|++++++++.+...++|+||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey   92 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY   92 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc---CCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEe
Confidence            34567889999999999999998777789999997654   223568899999999999999999999865578899999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      +++|+|..++.
T Consensus        93 ~~~g~l~~~~~  103 (285)
T d1fmka3          93 MSKGSLLDFLK  103 (285)
T ss_dssp             CTTCBHHHHHS
T ss_pred             cCCCchhhhhh
Confidence            99999887764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2e-17  Score=102.07  Aligned_cols=89  Identities=18%  Similarity=0.111  Sum_probs=75.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+..... .......+.+|+.++..++|+|++++++++.+. ..++|||
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            3667899999999999999975 588999999875321 122345688999999999999999999999998 9999999


Q ss_pred             cCCCCChhhhcc
Q 044522           99 YPCNGSLDHNLC  110 (113)
Q Consensus        99 ~~~~g~L~~~l~  110 (113)
                      |+++|+|.+++.
T Consensus        89 y~~gg~L~~~~~  100 (288)
T d1uu3a_          89 YAKNGELLKYIR  100 (288)
T ss_dssp             CCTTEEHHHHHH
T ss_pred             ccCCCCHHHhhh
Confidence            999999988765

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-16  Score=97.76  Aligned_cols=88  Identities=28%  Similarity=0.432  Sum_probs=72.4

Q ss_pred             HhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEE
Q 044522           24 TLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVY   97 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~   97 (113)
                      .++++||+|+||.||+|.+..    ...+|+|.++.... ......+.+|+.+++.++|+|+++++|++...  ..++|+
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccC-HHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            357789999999999998642    23589999875332 45667899999999999999999999998764  789999


Q ss_pred             ecCCCCChhhhccCC
Q 044522           98 GYPCNGSLDHNLCGP  112 (113)
Q Consensus        98 e~~~~g~L~~~l~~~  112 (113)
                      ||+++|+|.+++...
T Consensus       109 E~~~~g~l~~~~~~~  123 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNE  123 (311)
T ss_dssp             ECCTTCBHHHHHHCT
T ss_pred             EEeecCchhhhhccc
Confidence            999999999877643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=9.1e-17  Score=99.84  Aligned_cols=92  Identities=25%  Similarity=0.339  Sum_probs=72.6

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCc--EEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQ--VVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~--~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~~   94 (113)
                      ...+.+.+.||+|+||.||+|.+. .+.  .+++|.++.... ....+.+.+|+.++..+ +|+|++++++++... ..+
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC-hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            345567889999999999999874 343  467887764331 33456789999999998 799999999999998 999


Q ss_pred             EEEecCCCCChhhhccCC
Q 044522           95 LVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~~~  112 (113)
                      +|+||+++|+|.+++++.
T Consensus        88 iV~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             EEECCCTTCBHHHHHHTT
T ss_pred             EEEEecCCCcHHHHHhhc
Confidence            999999999999988653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.66  E-value=1.5e-16  Score=98.94  Aligned_cols=87  Identities=22%  Similarity=0.188  Sum_probs=73.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +...+.||+|+||.||++... .+..+|+|.++.... .....+.+.+|+.++..++|||++++++++.+. ..++++||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence            445678999999999999864 578899999876432 234556789999999999999999999999998 99999999


Q ss_pred             CCCCChhhhc
Q 044522          100 PCNGSLDHNL  109 (113)
Q Consensus       100 ~~~g~L~~~l  109 (113)
                      +.+|++..++
T Consensus        97 ~~~g~l~~~~  106 (309)
T d1u5ra_          97 CLGSASDLLE  106 (309)
T ss_dssp             CSEEHHHHHH
T ss_pred             cCCCchHHHH
Confidence            9999887654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.4e-16  Score=99.64  Aligned_cols=90  Identities=27%  Similarity=0.377  Sum_probs=71.0

Q ss_pred             HhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~~   93 (113)
                      .+.+.+.||+|+||.||++.+..      ...+++|.+..... ......+.+|+.++..+ +|+|++++++++.+. ..
T Consensus        38 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC-HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            45577899999999999998632      23688998865431 33445688899998887 899999999999998 99


Q ss_pred             EEEEecCCCCChhhhccCC
Q 044522           94 LLVYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~~~  112 (113)
                      ++|+||+++|+|.++|++.
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTT
T ss_pred             EEEEEcCCCCcHHHHHHhc
Confidence            9999999999999998653

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6.5e-17  Score=98.54  Aligned_cols=85  Identities=34%  Similarity=0.430  Sum_probs=71.5

Q ss_pred             HhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec--eEEEEEec
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI--VWLLVYGY   99 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~--~~~lv~e~   99 (113)
                      .+.+.+.||+|+||.||+|.+. +..+|+|.++...    ..+.+.+|+.+++.++|+|++++++++.+.  ..++|+||
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           8 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            3456788999999999999985 6789999997543    335688999999999999999999998654  68999999


Q ss_pred             CCCCChhhhccC
Q 044522          100 PCNGSLDHNLCG  111 (113)
Q Consensus       100 ~~~g~L~~~l~~  111 (113)
                      +++|+|.+++.+
T Consensus        83 ~~~g~L~~~l~~   94 (262)
T d1byga_          83 MAKGSLVDYLRS   94 (262)
T ss_dssp             CTTEEHHHHHHH
T ss_pred             cCCCCHHHHHHh
Confidence            999999998753

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.5e-16  Score=96.14  Aligned_cols=87  Identities=30%  Similarity=0.410  Sum_probs=72.0

Q ss_pred             hHhcCccccCCCceEEEEEeCC-----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALRD-----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLV   96 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv   96 (113)
                      +.+.+.||+|+||.||+|.++.     ...+|+|.++.... ......+.+|+.++..++|+|+++++|++... ..+++
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC-hHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            3467889999999999998643     13689999876432 34455789999999999999999999999988 99999


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +||+.+|++...+.
T Consensus        88 ~e~~~~~~l~~~~~  101 (283)
T d1mqba_          88 TEYMENGALDKFLR  101 (283)
T ss_dssp             EECCTTEEHHHHHH
T ss_pred             EEecccCcchhhhh
Confidence            99999998887654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=2.2e-16  Score=98.47  Aligned_cols=90  Identities=21%  Similarity=0.161  Sum_probs=75.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.++.... .....+.+.+|+.+++.++|||++++++++.+. ..++|+|
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   84 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   84 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEee
Confidence            4567789999999999999975 588999999875321 122346688999999999999999999999998 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+.+|++..++..
T Consensus        85 ~~~gg~l~~~~~~   97 (316)
T d1fota_          85 YIEGGELFSLLRK   97 (316)
T ss_dssp             CCCSCBHHHHHHH
T ss_pred             ecCCccccccccc
Confidence            9999998877653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.63  E-value=8.8e-16  Score=94.15  Aligned_cols=88  Identities=19%  Similarity=0.145  Sum_probs=73.0

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch---h----HHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-e
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA---C----AQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-V   92 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~---~----~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~   92 (113)
                      +.+.+.||+|+||.||++... ++..+|+|.++....   .    ......+.+|+.++..+. |+|++++++++.+. .
T Consensus         5 y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~   84 (277)
T d1phka_           5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   84 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcc
Confidence            456788999999999999874 578999999875421   0    112345788999999996 99999999999999 9


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      ++++|||+++|+|.+++.
T Consensus        85 ~~ivmE~~~~g~L~~~l~  102 (277)
T d1phka_          85 FFLVFDLMKKGELFDYLT  102 (277)
T ss_dssp             EEEEEECCTTCBHHHHHH
T ss_pred             eEEEEEcCCCchHHHHHH
Confidence            999999999999998875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.5e-16  Score=97.94  Aligned_cols=90  Identities=30%  Similarity=0.341  Sum_probs=75.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~-~   92 (113)
                      ..+.+++.||+|+||.||+|.+.      .+..+|+|.++.... ......+.+|+.++..+ +|+|++++++++... .
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC-HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            45567899999999999999752      245799999976542 44556788999999888 699999999999988 8


Q ss_pred             EEEEEecCCCCChhhhccC
Q 044522           93 WLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~~  111 (113)
                      .++++||+++|+|..++++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~  120 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRR  120 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHH
T ss_pred             EEEEEEcCCCCCHHHHHHh
Confidence            9999999999999988753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.6e-16  Score=98.91  Aligned_cols=90  Identities=20%  Similarity=0.168  Sum_probs=75.4

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEe
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.++.... .......+.+|+.++..++|||++++++++.+. ..++|+|
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~e   85 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccccee
Confidence            4556788999999999999874 588999999975421 112346688999999999999999999999999 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|..++.+
T Consensus        86 y~~gg~L~~~~~~   98 (337)
T d1o6la_          86 YANGGELFFHLSR   98 (337)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             ccCCCchhhhhhc
Confidence            9999999887653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.5e-16  Score=95.18  Aligned_cols=88  Identities=24%  Similarity=0.283  Sum_probs=71.9

Q ss_pred             HhHhcCccccCCCceEEEEEeCC----CcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALRD----GQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLVY   97 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv~   97 (113)
                      .+.+.+.||+|+||.||+|.+..    +..+++|.++.... ......+.+|+.+++.++|||++++++++.+...++++
T Consensus         8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~   86 (273)
T d1mp8a_           8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM   86 (273)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEE
Confidence            45678899999999999998642    34588888765432 34456789999999999999999999998655889999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+|++..++.
T Consensus        87 E~~~~g~l~~~~~   99 (273)
T d1mp8a_          87 ELCTLGELRSFLQ   99 (273)
T ss_dssp             ECCTTEEHHHHHH
T ss_pred             EeccCCcHHhhhh
Confidence            9999999987654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.4e-16  Score=96.70  Aligned_cols=89  Identities=21%  Similarity=0.331  Sum_probs=74.7

Q ss_pred             HHhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VW   93 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~   93 (113)
                      ..+.+.+.||+|+||.||+|.+.      .+..||+|.++.... ......+.+|+.++..++|+|++++++.+... ..
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccC-hHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            34457888999999999999753      146799999976432 45556789999999999999999999999888 99


Q ss_pred             EEEEecCCCCChhhhcc
Q 044522           94 LLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        94 ~lv~e~~~~g~L~~~l~  110 (113)
                      ++++||+.+|+|..++.
T Consensus        99 ~lv~e~~~~g~l~~~~~  115 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLR  115 (308)
T ss_dssp             EEEEECCTTCBHHHHHH
T ss_pred             eEEEeecCCCCHHHHHH
Confidence            99999999999988764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=5.8e-16  Score=95.85  Aligned_cols=88  Identities=24%  Similarity=0.319  Sum_probs=75.0

Q ss_pred             HhHhcCccccCCCceEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR------DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~   94 (113)
                      .+.+.+.||+|+||.||+|.+.      .+..+|+|.++.... .+....+.+|+.+++.++|+|++++++++... ..+
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   92 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC   92 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC-hHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence            3456788999999999999863      246799999876442 44566799999999999999999999999988 999


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+|+|.++++
T Consensus        93 ~v~e~~~~g~L~~~l~  108 (301)
T d1lufa_          93 LLFEYMAYGDLNEFLR  108 (301)
T ss_dssp             EEEECCTTCBHHHHHH
T ss_pred             EEEEecCCCcHHHHHH
Confidence            9999999999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.5e-16  Score=96.42  Aligned_cols=89  Identities=20%  Similarity=0.206  Sum_probs=70.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHH-hhCCCCccceeeeEEEec-eEEEEEe
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEIL-SCAQHRSLVVLVGYCIEI-VWLLVYG   98 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~-~~~~h~~i~~l~~~~~~~-~~~lv~e   98 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++.... .......+..|..++ ..++|||++++++++.+. ..++|+|
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            456789999999999999975 588899999975321 012234455666654 468999999999999999 9999999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|..++.+
T Consensus        84 y~~~g~L~~~i~~   96 (320)
T d1xjda_          84 YLNGGDLMYHIQS   96 (320)
T ss_dssp             CCTTCBHHHHHHH
T ss_pred             ecCCCcHHHHhhc
Confidence            9999999998753

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.61  E-value=8.2e-16  Score=94.13  Aligned_cols=88  Identities=19%  Similarity=0.095  Sum_probs=73.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-----eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-----VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-----~~~l   95 (113)
                      |.+.+.||+|+||.||++... .+..+|+|.++.... .......+.+|+.++..++|+|++++++++...     ..++
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             eEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEE
Confidence            567789999999999999864 588999999976432 234556789999999999999999999988764     3889


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ||||+++|+|..++.
T Consensus        89 vmE~~~g~~L~~~~~  103 (277)
T d1o6ya_          89 VMEYVDGVTLRDIVH  103 (277)
T ss_dssp             EEECCCEEEHHHHHH
T ss_pred             EEECCCCCEehhhhc
Confidence            999999999987664

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.4e-15  Score=94.21  Aligned_cols=87  Identities=24%  Similarity=0.251  Sum_probs=67.5

Q ss_pred             HHhHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-----eEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-----VWLL   95 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-----~~~l   95 (113)
                      +.+.+.+.||+|+||.||+|.+. +..+|+|.++...   ........|+..+..++|+|++++++++...     ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            34567889999999999999864 7889999987543   2211222455555678999999999999754     4789


Q ss_pred             EEecCCCCChhhhccC
Q 044522           96 VYGYPCNGSLDHNLCG  111 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~  111 (113)
                      |+||+.+|+|..++++
T Consensus        79 v~Ey~~~g~L~~~l~~   94 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNR   94 (303)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEecccCCCHHHHHhc
Confidence            9999999999998864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.3e-16  Score=94.60  Aligned_cols=91  Identities=29%  Similarity=0.264  Sum_probs=65.3

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC--CC--cEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEE
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR--DG--QVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWL   94 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~--~~--~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~   94 (113)
                      ...+.+.+.||+|+||.||+|.+.  .+  ..+|+|.+..... .....+.+.+|+.++..++|+|+++++|++.++..+
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~   86 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK   86 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchh
Confidence            344667888999999999999853  22  3689998865432 134456789999999999999999999999776778


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+.+|++.+.+.
T Consensus        87 lv~e~~~~~~l~~~~~  102 (273)
T d1u46a_          87 MVTELAPLGSLLDRLR  102 (273)
T ss_dssp             EEEECCTTCBHHHHHH
T ss_pred             eeeeeecCcchhhhhh
Confidence            9999999999887653

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.3e-15  Score=93.06  Aligned_cols=90  Identities=27%  Similarity=0.361  Sum_probs=68.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC--------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD--------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~--------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~   91 (113)
                      ..+.+++.||+|+||.||++....        +..+|+|.++.... ......+.+|...+..+ +|+|++++++++.+.
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC-hHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            355678899999999999997521        24689999876542 34556788888877777 799999999999988


Q ss_pred             -eEEEEEecCCCCChhhhccC
Q 044522           92 -VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~~l~~  111 (113)
                       ..++|+||+.+|+|.++|..
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~  112 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQA  112 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHT
T ss_pred             CeEEEEEEccCCCcHHHHHHh
Confidence             99999999999999998864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.57  E-value=1.5e-15  Score=93.31  Aligned_cols=88  Identities=19%  Similarity=0.111  Sum_probs=73.3

Q ss_pred             hHhcCccccCCCceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           23 STLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.+.++||+|+||.||++....+..+|+|.++...........+.+|+.++..++|+|++++++.+... ..++++|++.
T Consensus         4 Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~   83 (286)
T d1ob3a_           4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (286)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             ceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeeh
Confidence            345678999999999999988789999999976543233356788999999999999999999999998 9999999998


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      ++.+..+..
T Consensus        84 ~~~~~~~~~   92 (286)
T d1ob3a_          84 QDLKKLLDV   92 (286)
T ss_dssp             EEHHHHHHT
T ss_pred             hhhHHHHHh
Confidence            876666544

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3e-15  Score=93.25  Aligned_cols=88  Identities=23%  Similarity=0.317  Sum_probs=69.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CC----cEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEeceEEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DG----QVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEIVWLLV   96 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~----~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~~~~lv   96 (113)
                      .+.+.+.||+|+||.||+|.+. .+    ..+++|.++.... .+..+.+.+|+.++..++|+|++++++++..+..+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            3556789999999999999864 23    3588888765321 2345678999999999999999999999987777888


Q ss_pred             EecCCCCChhhhcc
Q 044522           97 YGYPCNGSLDHNLC  110 (113)
Q Consensus        97 ~e~~~~g~L~~~l~  110 (113)
                      +|++.+|+|.+++.
T Consensus        89 ~e~~~~~~l~~~~~  102 (317)
T d1xkka_          89 TQLMPFGCLLDYVR  102 (317)
T ss_dssp             EECCTTCBHHHHHH
T ss_pred             EEeccCCccccccc
Confidence            99999999887654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3e-15  Score=92.46  Aligned_cols=83  Identities=22%  Similarity=0.254  Sum_probs=66.1

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...........+.+|+.++..++|+|++++++++.+. ..++++||+
T Consensus         4 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~   83 (298)
T d1gz8a_           4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   83 (298)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeec
Confidence            445678999999999999974 588999999975432122346688999999999999999999999999 999999999


Q ss_pred             CCCCh
Q 044522          101 CNGSL  105 (113)
Q Consensus       101 ~~g~L  105 (113)
                      .++.+
T Consensus        84 ~~~~~   88 (298)
T d1gz8a_          84 HQDLK   88 (298)
T ss_dssp             SEEHH
T ss_pred             CCchh
Confidence            76533

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.6e-15  Score=92.70  Aligned_cols=84  Identities=19%  Similarity=0.131  Sum_probs=65.9

Q ss_pred             CccccCCCceEEEEEeC-CCcEEEEEEeeccchhH---HHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecCC
Q 044522           27 KTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACA---QAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYPC  101 (113)
Q Consensus        27 ~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~~  101 (113)
                      +.||+|+||.||++... .+..+|+|.++......   .....+.+|+.++..++|+|++++++++... ..++||||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            57999999999999974 58899999987543111   1124578999999999999999999999999 9999999999


Q ss_pred             CCChhhhcc
Q 044522          102 NGSLDHNLC  110 (113)
Q Consensus       102 ~g~L~~~l~  110 (113)
                      ++.+..++.
T Consensus        84 ~~~~~~~~~   92 (299)
T d1ua2a_          84 TDLEVIIKD   92 (299)
T ss_dssp             EEHHHHHTT
T ss_pred             chHHhhhhh
Confidence            887766554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=7.8e-15  Score=92.01  Aligned_cols=79  Identities=18%  Similarity=0.068  Sum_probs=64.7

Q ss_pred             cCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHh-hCCCCccceeeeEEEe----c-eEEEEEe
Q 044522           26 GKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILS-CAQHRSLVVLVGYCIE----I-VWLLVYG   98 (113)
Q Consensus        26 ~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~-~~~h~~i~~l~~~~~~----~-~~~lv~e   98 (113)
                      ++.||+|+||.||++... .+..+|+|.++...       ...+|+.++. ..+|+|++++++++.+    . ..++++|
T Consensus        17 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-------~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEECSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             eEEeeeccCeEEEEEEECCCCCEEEEEEECCcH-------HHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            467999999999999874 57899999987532       3456777654 5589999999998865    3 6899999


Q ss_pred             cCCCCChhhhccC
Q 044522           99 YPCNGSLDHNLCG  111 (113)
Q Consensus        99 ~~~~g~L~~~l~~  111 (113)
                      |+++|+|.++|.+
T Consensus        90 y~~gg~L~~~i~~  102 (335)
T d2ozaa1          90 CLDGGELFSRIQD  102 (335)
T ss_dssp             CCCSEEHHHHHHS
T ss_pred             CCCCCcHHHHHHh
Confidence            9999999998865

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.55  E-value=8.9e-15  Score=92.65  Aligned_cols=89  Identities=17%  Similarity=0.154  Sum_probs=69.3

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHH-HHHHHH---HHHHHHhhCCCCccceeeeEEEec-eEEE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQ-AAFQFI---SEDEILSCAQHRSLVVLVGYCIEI-VWLL   95 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~-~~~~~~---~e~~~~~~~~h~~i~~l~~~~~~~-~~~l   95 (113)
                      .+.+.+.||+|+||.||++... .+..+|+|.+........ ....+.   .++.++..++|||++++++++... ..++
T Consensus         5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~i   84 (364)
T d1omwa3           5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF   84 (364)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred             hCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEE
Confidence            3556788999999999999975 588999999874321111 112233   346667778999999999999998 9999


Q ss_pred             EEecCCCCChhhhcc
Q 044522           96 VYGYPCNGSLDHNLC  110 (113)
Q Consensus        96 v~e~~~~g~L~~~l~  110 (113)
                      ||||+++|+|..++.
T Consensus        85 vmE~~~gg~L~~~l~   99 (364)
T d1omwa3          85 ILDLMNGGDLHYHLS   99 (364)
T ss_dssp             EECCCCSCBHHHHHH
T ss_pred             EEEecCCCcHHHHHH
Confidence            999999999998875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=3.8e-15  Score=93.96  Aligned_cols=90  Identities=21%  Similarity=0.124  Sum_probs=74.6

Q ss_pred             HHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEE
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSA-CAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVY   97 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~   97 (113)
                      ..+.+.+.||+|+||.||++... .+..+|+|.+..... .......+.+|+.++..++|+|++++++++... ..++++
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            34556788999999999999975 588999999875321 112345688999999999999999999999998 999999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+|+|..++.
T Consensus       121 e~~~~g~l~~~l~  133 (350)
T d1rdqe_         121 EYVAGGEMFSHLR  133 (350)
T ss_dssp             ECCTTCBHHHHHH
T ss_pred             ccccccchhhhHh
Confidence            9999999988764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.1e-14  Score=89.47  Aligned_cols=89  Identities=17%  Similarity=0.116  Sum_probs=74.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-eEEEEEecC
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-VWLLVYGYP  100 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-~~~lv~e~~  100 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...........+.+|+.+++.++|+|++++.+++... ..+++++++
T Consensus         4 y~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~   83 (292)
T d1unla_           4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeec
Confidence            345678999999999999974 578899999876543345567789999999999999999999999999 999999999


Q ss_pred             CCCChhhhccC
Q 044522          101 CNGSLDHNLCG  111 (113)
Q Consensus       101 ~~g~L~~~l~~  111 (113)
                      .++++..++..
T Consensus        84 ~~~~l~~~~~~   94 (292)
T d1unla_          84 DQDLKKYFDSC   94 (292)
T ss_dssp             SEEHHHHHHHT
T ss_pred             ccccccccccc
Confidence            98887766543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.4e-14  Score=89.16  Aligned_cols=90  Identities=16%  Similarity=0.054  Sum_probs=72.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec------eEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI------VWLL   95 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~------~~~l   95 (113)
                      |.+.+.||+|+||.||++... .+..+|+|.++...........+.+|+.++..++|+|++++++++...      ..++
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~   99 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY   99 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEE
Confidence            456788999999999999864 588999999976543345566788999999999999999999988532      3456


Q ss_pred             EEecCCCCChhhhccCC
Q 044522           96 VYGYPCNGSLDHNLCGP  112 (113)
Q Consensus        96 v~e~~~~g~L~~~l~~~  112 (113)
                      +++++.+|+|.+++...
T Consensus       100 i~~~~~gg~L~~~~~~~  116 (348)
T d2gfsa1         100 LVTHLMGADLNNIVKCQ  116 (348)
T ss_dssp             EEEECCSEEHHHHHTTC
T ss_pred             EEEeecCCchhhhcccc
Confidence            67778899999987653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4.1e-14  Score=87.27  Aligned_cols=90  Identities=28%  Similarity=0.315  Sum_probs=68.2

Q ss_pred             HHhHhcCccccCCCceEEEEEeCC------CcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec--
Q 044522           21 IASTLGKTPRRGGFGAVYKGALRD------GQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI--   91 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~~------~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~--   91 (113)
                      ..+.+.+.||+|+||.||+|.+..      +..+|+|.++.... ......+..|...+..+ +|+|++.+.+++...  
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            456678999999999999998531      35799999875432 34455677777766665 789999999988765  


Q ss_pred             eEEEEEecCCCCChhhhccC
Q 044522           92 VWLLVYGYPCNGSLDHNLCG  111 (113)
Q Consensus        92 ~~~lv~e~~~~g~L~~~l~~  111 (113)
                      ..++++||+++|+|.++++.
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~  111 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRS  111 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHH
T ss_pred             eEEEEEEecCCCcHHHHHHh
Confidence            78999999999999998753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7e-14  Score=88.13  Aligned_cols=84  Identities=18%  Similarity=0.087  Sum_probs=66.7

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEE------ec-eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCI------EI-VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~------~~-~~~   94 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...........+.+|+.++..++|+|++++++++.      .. ..+
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            455678999999999999975 5889999999865433455667889999999999999999999985      23 789


Q ss_pred             EEEecCCCCChh
Q 044522           95 LVYGYPCNGSLD  106 (113)
Q Consensus        95 lv~e~~~~g~L~  106 (113)
                      +++||+.++.+.
T Consensus        99 iv~Ey~~~~l~~  110 (355)
T d2b1pa1          99 LVMELMDANLCQ  110 (355)
T ss_dssp             EEEECCSEEHHH
T ss_pred             EEEeccchHHHH
Confidence            999999765443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.46  E-value=8.7e-14  Score=86.76  Aligned_cols=83  Identities=18%  Similarity=0.157  Sum_probs=68.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhC-CCCccceeeeEEEec---eEEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCA-QHRSLVVLVGYCIEI---VWLLVY   97 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i~~l~~~~~~~---~~~lv~   97 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...     ...+.+|+.++..+ .|+|++++++++...   ..++++
T Consensus        37 y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            456688999999999999974 57889999987543     23577899999988 499999999998754   699999


Q ss_pred             ecCCCCChhhhcc
Q 044522           98 GYPCNGSLDHNLC  110 (113)
Q Consensus        98 e~~~~g~L~~~l~  110 (113)
                      ||+.+++|..+.+
T Consensus       112 e~~~~~~L~~~~~  124 (328)
T d3bqca1         112 EHVNNTDFKQLYQ  124 (328)
T ss_dssp             ECCCSCBGGGTTT
T ss_pred             eecCCCcHHHHhc
Confidence            9999999877643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=7.2e-14  Score=87.73  Aligned_cols=87  Identities=18%  Similarity=0.126  Sum_probs=63.5

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-------eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-------VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-------~~~   94 (113)
                      |.+.+.||+|+||.||++... .+..+|+|.++.........+.+.+|+.+++.++|+|++++++++...       ..+
T Consensus        20 Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~   99 (346)
T d1cm8a_          20 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY   99 (346)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEE
Confidence            345678999999999999975 588999999976443345667789999999999999999999998653       469


Q ss_pred             EEEecCCCCChhhhcc
Q 044522           95 LVYGYPCNGSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~g~L~~~l~  110 (113)
                      +++||+ +.+|..++.
T Consensus       100 lv~e~~-~~~l~~~~~  114 (346)
T d1cm8a_         100 LVMPFM-GTDLGKLMK  114 (346)
T ss_dssp             EEEECC-SEEHHHHHH
T ss_pred             EEEecc-cccHHHHHH
Confidence            999999 445655543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.4e-13  Score=86.44  Aligned_cols=88  Identities=15%  Similarity=0.024  Sum_probs=66.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEec-----eEEEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIEI-----VWLLV   96 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~~-----~~~lv   96 (113)
                      +.+.+.||+|+||.||+|... .+..+|+|.++.... ......+.+|+.++..++|+|++++++++...     ..+++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcC-hHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence            446688999999999999864 688999999975432 45566788999999999999999999998654     22444


Q ss_pred             EecCCCCChhhhccC
Q 044522           97 YGYPCNGSLDHNLCG  111 (113)
Q Consensus        97 ~e~~~~g~L~~~l~~  111 (113)
                      ++++.+|+|.+++..
T Consensus        89 ~~~~~~g~L~~~l~~  103 (345)
T d1pmea_          89 VTHLMGADLYKLLKT  103 (345)
T ss_dssp             EEECCCEEHHHHHHH
T ss_pred             EEeecCCchhhhhhc
Confidence            566778999988753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.1e-13  Score=84.65  Aligned_cols=89  Identities=22%  Similarity=0.253  Sum_probs=67.9

Q ss_pred             HHHhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe--------
Q 044522           20 IIASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE--------   90 (113)
Q Consensus        20 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~--------   90 (113)
                      +..|.+.+.||+|+||.||++... .+..+|+|.+............+.+|+.++..++|+|++++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            345667889999999999999974 58899999986543222334567899999999999999999988754        


Q ss_pred             c-eEEEEEecCCCCChhhh
Q 044522           91 I-VWLLVYGYPCNGSLDHN  108 (113)
Q Consensus        91 ~-~~~lv~e~~~~g~L~~~  108 (113)
                      . ..++++|++.++.+...
T Consensus        89 ~~~~~iv~e~~~~~~~~~~  107 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLL  107 (318)
T ss_dssp             --CEEEEEECCCEEHHHHH
T ss_pred             CceEEEEEeccCCCccchh
Confidence            2 57899999987765544

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1e-13  Score=86.43  Aligned_cols=90  Identities=22%  Similarity=0.168  Sum_probs=72.0

Q ss_pred             HHhHhcCccccCCCceEEEEEeC----CCcEEEEEEeeccch--hHHHHHHHHHHHHHHhhCCC-CccceeeeEEEec-e
Q 044522           21 IASTLGKTPRRGGFGAVYKGALR----DGQVVAVKHHKVMSA--CAQAAFQFISEDEILSCAQH-RSLVVLVGYCIEI-V   92 (113)
Q Consensus        21 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~~~h-~~i~~l~~~~~~~-~   92 (113)
                      ..+.+.+.||+|+||.||++...    .+..+|+|.++....  .......+.+|+.++..++| +|++++++++.+. .
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            45677899999999999999752    367899998864321  11223457789999999966 8999999999999 9


Q ss_pred             EEEEEecCCCCChhhhcc
Q 044522           93 WLLVYGYPCNGSLDHNLC  110 (113)
Q Consensus        93 ~~lv~e~~~~g~L~~~l~  110 (113)
                      .++++||+.+|+|..++.
T Consensus       104 ~~~v~e~~~~~~L~~~i~  121 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLS  121 (322)
T ss_dssp             EEEEECCCCSCBHHHHHH
T ss_pred             eeeeeecccccHHHHHHH
Confidence            999999999999988765

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=8.4e-14  Score=84.98  Aligned_cols=88  Identities=22%  Similarity=0.271  Sum_probs=67.6

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchh----HHHHHHHHHHHHHHhhCC--CCccceeeeEEEec-eEE
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSAC----AQAAFQFISEDEILSCAQ--HRSLVVLVGYCIEI-VWL   94 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~~~~~~--h~~i~~l~~~~~~~-~~~   94 (113)
                      +.+++.||+|+||.||++... .+..+|+|.++.....    ......+.+|+.++..++  |+|++++++++.++ ..+
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~   85 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV   85 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEE
Confidence            567889999999999999974 5889999998753210    011223567888888875  89999999999998 999


Q ss_pred             EEEecCCC-CChhhhcc
Q 044522           95 LVYGYPCN-GSLDHNLC  110 (113)
Q Consensus        95 lv~e~~~~-g~L~~~l~  110 (113)
                      +++|++.+ +++.+++.
T Consensus        86 lv~e~~~~~~~l~~~~~  102 (273)
T d1xwsa_          86 LILERPEPVQDLFDFIT  102 (273)
T ss_dssp             EEEECCSSEEEHHHHHH
T ss_pred             EEEEeccCcchHHHHHh
Confidence            99999975 56665543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.3e-12  Score=82.14  Aligned_cols=77  Identities=26%  Similarity=0.237  Sum_probs=61.8

Q ss_pred             HhHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCccceeeeEEEe------c-eE
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVLVGYCIE------I-VW   93 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l~~~~~~------~-~~   93 (113)
                      .|...++||+|+||.||++... .+..+|+|.+.....      ...+|+.+++.++|+|++++++++..      . ++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            4555678999999999999975 588999999876431      12368889999999999999998853      2 57


Q ss_pred             EEEEecCCCCC
Q 044522           94 LLVYGYPCNGS  104 (113)
Q Consensus        94 ~lv~e~~~~g~  104 (113)
                      ++++||++++.
T Consensus        95 ~lv~Ey~~~~~  105 (350)
T d1q5ka_          95 NLVLDYVPETV  105 (350)
T ss_dssp             EEEEECCSEEH
T ss_pred             EEEEeccCCcc
Confidence            89999998764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.3e-12  Score=80.61  Aligned_cols=86  Identities=21%  Similarity=0.236  Sum_probs=61.1

Q ss_pred             HhHhcCccccCCCceEEEEEeC-C-CcEEEEEEeeccchhHHHHHHHHHHHHHHh---hCCCCccceeeeEEEe-----c
Q 044522           22 ASTLGKTPRRGGFGAVYKGALR-D-GQVVAVKHHKVMSACAQAAFQFISEDEILS---CAQHRSLVVLVGYCIE-----I   91 (113)
Q Consensus        22 ~~~~~~~lg~g~~~~v~~~~~~-~-~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~---~~~h~~i~~l~~~~~~-----~   91 (113)
                      .|.+.+.||+|+||.||++... . +..+|+|.++...........+.+|+.+++   ..+|+|++++++++..     .
T Consensus         8 ~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~   87 (305)
T d1blxa_           8 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   87 (305)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred             CEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccC
Confidence            3456788999999999999863 3 567999998654321122223445665554   4589999999998853     2


Q ss_pred             -eEEEEEecCCCCChhh
Q 044522           92 -VWLLVYGYPCNGSLDH  107 (113)
Q Consensus        92 -~~~lv~e~~~~g~L~~  107 (113)
                       ..++++|++.++.+..
T Consensus        88 ~~~~~~~e~~~~~~~~~  104 (305)
T d1blxa_          88 TKLTLVFEHVDQDLTTY  104 (305)
T ss_dssp             EEEEEEEECCSCBHHHH
T ss_pred             ceEEEEEEeccCCchhh
Confidence             6899999999876543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.23  E-value=5.4e-12  Score=77.55  Aligned_cols=83  Identities=23%  Similarity=0.211  Sum_probs=65.3

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCC-CccceeeeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQH-RSLVVLVGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~i~~l~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||++... .+..+|+|.++...    ....+.+|...+..+.| ++++.+.++.... ..++++||
T Consensus         7 Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc----CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            456788999999999999975 57889999876532    11235567777888864 8899999998888 89999999


Q ss_pred             CCCCChhhhcc
Q 044522          100 PCNGSLDHNLC  110 (113)
Q Consensus       100 ~~~g~L~~~l~  110 (113)
                      + +++|..++.
T Consensus        83 ~-~~~l~~~~~   92 (293)
T d1csna_          83 L-GPSLEDLLD   92 (293)
T ss_dssp             C-CCBHHHHHH
T ss_pred             c-CCCHHHHHH
Confidence            8 578887764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.17  E-value=1.4e-11  Score=75.74  Aligned_cols=81  Identities=25%  Similarity=0.193  Sum_probs=60.2

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCCCCcccee-eeEEEec-eEEEEEec
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQHRSLVVL-VGYCIEI-VWLLVYGY   99 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i~~l-~~~~~~~-~~~lv~e~   99 (113)
                      +.+.+.||+|+||.||+|... .+..+|+|.+.....    ...+..|+.++..+.|++++.. ....... ..++++||
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            567889999999999999874 578899998775431    1246788999999987766555 4444555 88899999


Q ss_pred             CCCCChhhh
Q 044522          100 PCNGSLDHN  108 (113)
Q Consensus       100 ~~~g~L~~~  108 (113)
                      +.+ ++...
T Consensus        85 ~~~-~l~~~   92 (299)
T d1ckia_          85 LGP-SLEDL   92 (299)
T ss_dssp             CCC-BHHHH
T ss_pred             cCC-chhhh
Confidence            854 45443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.78  E-value=2.1e-08  Score=57.63  Aligned_cols=81  Identities=19%  Similarity=0.034  Sum_probs=56.2

Q ss_pred             HhcCccccCCCceEEEEEeCCCcEEEEEEeeccchh----------------HHHHHHHHHHHHHHhhCCCCccceeeeE
Q 044522           24 TLGKTPRRGGFGAVYKGALRDGQVVAVKHHKVMSAC----------------AQAAFQFISEDEILSCAQHRSLVVLVGY   87 (113)
Q Consensus        24 ~~~~~lg~g~~~~v~~~~~~~~~~~~ik~~~~~~~~----------------~~~~~~~~~e~~~~~~~~h~~i~~l~~~   87 (113)
                      .+++.||+|+||.||++...++..+|+|.++.....                .........|...+..+.|.+++..++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            467899999999999998777889999987642110                0011223456777888888888876643


Q ss_pred             EEeceEEEEEecCCCCChhh
Q 044522           88 CIEIVWLLVYGYPCNGSLDH  107 (113)
Q Consensus        88 ~~~~~~~lv~e~~~~g~L~~  107 (113)
                      .   ..++++||+.+..+..
T Consensus        83 ~---~~~lvme~~~~~~~~~   99 (191)
T d1zara2          83 E---GNAVLMELIDAKELYR   99 (191)
T ss_dssp             E---TTEEEEECCCCEEGGG
T ss_pred             c---CCEEEEEeeccccccc
Confidence            2   3468999998766544

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=1.9e-08  Score=62.87  Aligned_cols=77  Identities=14%  Similarity=0.018  Sum_probs=55.8

Q ss_pred             hHhcCccccCCCceEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-----------CCccceeeeEEEe
Q 044522           23 STLGKTPRRGGFGAVYKGALR-DGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-----------HRSLVVLVGYCIE   90 (113)
Q Consensus        23 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-----------h~~i~~l~~~~~~   90 (113)
                      |.+.++||+|+||.||++... .+..+|+|.++...   .....+.+|+.++..+.           |+|++++++++..
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~---~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc---cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            677899999999999999974 58899999998653   33345666776665553           5788988887754


Q ss_pred             c---eEEEEEecCCC
Q 044522           91 I---VWLLVYGYPCN  102 (113)
Q Consensus        91 ~---~~~lv~e~~~~  102 (113)
                      .   ...+++++...
T Consensus        92 ~~~~~~~~~~~~~~~  106 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVL  106 (362)
T ss_dssp             EETTEEEEEEEECCC
T ss_pred             ccccceeeeeeeccc
Confidence            3   55566665543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=90.96  E-value=0.24  Score=28.24  Aligned_cols=68  Identities=18%  Similarity=0.070  Sum_probs=42.4

Q ss_pred             ceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC--CCccceeeeEEEec-eEEEEEecCCCCChhh
Q 044522           35 GAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ--HRSLVVLVGYCIEI-VWLLVYGYPCNGSLDH  107 (113)
Q Consensus        35 ~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~--h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~  107 (113)
                      +.||+-...++..+.+|.......     ..+..|...+..+.  .--+.+++....++ ..+++++|+++.++..
T Consensus        25 ~~v~r~~~~~~~~~vlK~~~~~~~-----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~   95 (255)
T d1nd4a_          25 AAVFRLSAQGRPVLFVKTDLSGAL-----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS   95 (255)
T ss_dssp             CEEEEEECTTSCCEEEEEECSCTT-----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred             CeEEEEEeCCCCEEEEEeCCccCH-----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence            567876655566678887665431     12344555554442  22356677777777 8899999998766543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.52  E-value=0.67  Score=26.39  Aligned_cols=71  Identities=8%  Similarity=-0.009  Sum_probs=43.3

Q ss_pred             CceEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHHHhhCC-CCccceeeeEEEec-eEEEEEecCCCCChhh
Q 044522           34 FGAVYKGALRDGQVVAVKHHKVMSACAQAAFQFISEDEILSCAQ-HRSLVVLVGYCIEI-VWLLVYGYPCNGSLDH  107 (113)
Q Consensus        34 ~~~v~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i~~l~~~~~~~-~~~lv~e~~~~g~L~~  107 (113)
                      .+.+|+... ++..+.+|......  ......+.+|...+..+. +--+.+++.....+ ..+++++++++.++..
T Consensus        27 ~~~v~rv~~-~~~~~vlk~~~~~~--~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~   99 (263)
T d1j7la_          27 PAKVYKLVG-ENENLYLKMTDSRY--KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE   99 (263)
T ss_dssp             SSEEEEEEC-SSCEEEEEEECGGG--TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred             CCcEEEEEe-CCCeEEEEEcCCCc--ccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccc
Confidence            356787643 45567777765432  122223455666655442 33356677777777 8899999999877654