Citrus Sinensis ID: 044563

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MSAYAHQMERQLSSQSLSSRGGSVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHIESTKFPS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccEEEEEcccccccccccccHHccccccccHHHHHHHHcccccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccEEEEccccccccHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccHHccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccccccEEEEccccccccccEEccHHHHHHHHHcccEEEEEccccHHHcccccccccEEEcccccEEEHHHHHccccccc
Coil and Loop (DISEMBL)
MSAYAHQMERQLSsqslssrggsvifIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVEltkssgdnnyCKLFALHAELnsleadnlPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNtltpsyngldvvLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILlsrkhegqrnATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQslgkrvfklpnplyysfdhhiestkfps
Flexible Loop (DISEMBL)
MSAYAHQMERQLSSQSLSSRGGSVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILlsrkhegqrnaTTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLyysfdhhiestkfps
Low Complexity Region (SEG)
MSAYAHQMErqlssqslssrggsVIFigglitvgvllitllvtlAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHIESTKFPS
Disordered region (IsUnstruct)
**********************SVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHI*******
Disordered Region (DISOPRED)
************************IFIGGLITVGVLLITLLVTLAVMLQ********************YCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHIES*****
Disordered Region (DISEMBL)
******************SRGGSVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHIESTKFPS
Disordered Region (DISPRO)
******************S*GGSVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHIEST****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSAYAHQMERQLSSQSLSSRGGSVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHIESTKFPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
O04195	283	Uncharacterized protein A	yes	no	0.868	0.890	0.426	7e-52
P27061	255	Acid phosphatase 1 OS=Sol	N/A	no	0.703	0.8	0.285	1e-17
P10743	254	Stem 31 kDa glycoprotein	no	no	0.706	0.807	0.278	3e-13
P15490	254	Stem 28 kDa glycoprotein	no	no	0.706	0.807	0.276	4e-12
O49195	270	Vegetative storage protei	no	no	0.706	0.759	0.281	1e-10
P10742	291	Stem 31 kDa glycoprotein	no	no	0.696	0.694	0.266	4e-10
O82122	265	Vegetative storage protei	no	no	0.706	0.773	0.276	5e-10

>sp|O04195|Y2992_ARATH Uncharacterized protein At2g39920 OS=Arabidopsis thaliana GN=At2g39920 PE=2 SV=2

 Score =  204 bits (519), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/298 (42%), Positives = 172/298 (57%), Gaps = 46/298 (15%)

Query: 1   MSAYAHQMERQLSSQSLSSRGGS-------------------VIFIGGLITVGVLLITLL 41
           MSAY H MER+LS   LSSRG S                    IFI  L+T GVL+ITLL
Sbjct: 1   MSAYTHPMERELSG--LSSRGNSELGSRYSIESGCYMTSLAASIFIASLVTFGVLMITLL 58

Query: 42  VTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSL-EADNLPEICRGLAIRYI 100
           + L+ MLQSC+NR+  +VE  +      YCK+ +LH++LNSL E   LP +CR +A+  I
Sbjct: 59  IALSTMLQSCENRNIAIVEAQRLDESFGYCKILSLHSQLNSLDEESELPLLCRDVALHRI 118

Query: 101 KEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGY 160
           K+G + R+LN +IQ+  +YF T+ P  +  DVV++DIDD        +NLL        Y
Sbjct: 119 KQGIYLRELNFTIQMALTYFQTIKPMNDNCDVVVIDIDD--------TNLL---EQDSYY 167

Query: 161 IECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIM 220
           ++ IEEAKH K +  L L+ KL+ +G+ ++LLSR+ E +RNAT E L S GY  WS LIM
Sbjct: 168 MKYIEEAKHQKSILILALYSKLRSQGYSMVLLSRRPETERNATIEQLKSRGYSDWSHLIM 227

Query: 221 RLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ--SLGKRVFKLPNPLY 276
             ++  Q   +E L R        G  + G+I N MD L GQ     KR+FKLP+  Y
Sbjct: 228 SREDTRQ---KEELER--------GHRVIGVIGNHMDVLRGQWNWQSKRLFKLPSLTY 274

Arabidopsis thaliana (taxid: 3702)

>sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 10/214 (4%)

Query: 71  CKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNG 129
           C  +    E N+L     +PE C      Y+    +  +++        Y  ++    +G
Sbjct: 43  CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDG 102

Query: 130 LDVVLMDIDDI------FASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQ 183
            DV + D+D+       + S  +Y   + D V    ++E    A  L    +LKL+ ++ 
Sbjct: 103 RDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVEN-GTAPALGS--SLKLYQEVL 159

Query: 184 VRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQK 243
             G+ V LL+ + E  R+ T E L++AG+  W  LI+R  ++    +  Y S RR  + +
Sbjct: 160 KLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVE 219

Query: 244 EGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
           EGF I G   +Q   L+G S+  R FKLPNP+YY
Sbjct: 220 EGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYY 253

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 7/212 (3%)

Query: 71  CKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNG 129
           C  F L  E +++ A   +PE C      YI   QF  D     Q  +++F       + 
Sbjct: 43  CASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQ--QAFFYASEREVHH 100

Query: 130 LDVVLMDIDDIFASSSKY---SNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRG 186
            D+ +  ID+   S+  Y       ++  N   Y E + +        TLK + KL   G
Sbjct: 101 NDIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLG 160

Query: 187 WPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF 246
           + ++ LS ++  +   T   L  AG+  W  LI++  + +  ++  Y S  R  L ++G+
Sbjct: 161 FKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDPHLITPNALSYKSAMRENLLRQGY 220

Query: 247 HITGLISNQMDALIGQSLGK-RVFKLPNPLYY 277
            I G+I +Q   L+G   G+ R FKLPNP+YY
Sbjct: 221 RIVGIIGDQWSDLLGDHRGESRTFKLPNPMYY 252

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 8/213 (3%)

Query: 71  CKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNG 129
           C  + L  E +++   + +PE C      YI   Q+  D     Q  ++YF       + 
Sbjct: 42  CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQ--QAYFYARDLEVHP 99

Query: 130 LDVVLMDIDDIFASSSKY---SNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRG 186
            D  +  ID    S+  Y       +++ N   Y E + +        TLK + KL   G
Sbjct: 100 KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLG 159

Query: 187 WPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM-DSREYLSRRRTILQKEG 245
           + +I LS +   ++  T   L  AGY  W  LI++   +    ++  Y +  R  L ++G
Sbjct: 160 FKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQG 219

Query: 246 FHITGLISNQMDALIGQSLGK-RVFKLPNPLYY 277
           ++I G+I +Q   L+G   G+ R FKLPNPLYY
Sbjct: 220 YNIVGIIGDQWSDLLGGHRGESRTFKLPNPLYY 252

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 8/213 (3%)

Query: 71  CKLFALHAEL-NSLEADNLPEICRGLAIRY-IKEGQFARDLNLSIQIVESYFNTLTPSYN 128
           C+ + L  E  N +  D +P  C+     Y I   Q+  D     +    Y   L    +
Sbjct: 57  CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKND 116

Query: 129 GLDVVLMDIDDIFASSSKYSNLL---IDRVNVRGYIECIEEAKHLKHMF-TLKLFMKLQV 184
            ++V + D+DD   SS  Y        +      Y   +E  +    +  TL L+  L  
Sbjct: 117 TVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLE 176

Query: 185 RGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKE 244
            G   I++S + +     T E L + G   W  LI++  N  ++    Y S+ R  L K+
Sbjct: 177 LGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILK-PNGSKLTQVVYKSKVRNSLVKK 235

Query: 245 GFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
           G++I G I +Q   L+  + G RVFKLPNPLYY
Sbjct: 236 GYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 267

May function as somatic storage protein during early seedling development.

Arabidopsis thaliana (taxid: 3702)

>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 8/210 (3%)

Query: 71  CKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNG 129
           C  + L  E +++   + +PE C      YI   Q+  D     Q  ++YF       + 
Sbjct: 39  CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQ--QAYFYARDLEVHP 96

Query: 130 LDVVLMDIDDIFASSSKY---SNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRG 186
            D  +  ID    S+  Y       +++ N   Y E + +        TLK + KL   G
Sbjct: 97  KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLG 156

Query: 187 WPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM-DSREYLSRRRTILQKEG 245
           + +I LS +   ++  T   L  AGY  W  LI++   +    ++  Y +  R  L ++G
Sbjct: 157 FKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQG 216

Query: 246 FHITGLISNQMDALIGQSLGK-RVFKLPNP 274
           ++I G+I +Q   L+G   G+ R FKLPNP
Sbjct: 217 YNIVGIIGDQWSDLLGGHRGESRTFKLPNP 246

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|O82122|VSP2_ARATH Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 8/213 (3%)

Query: 71  CKLFALHAEL-NSLEADNLPEICRGLAIRY-IKEGQFARDLNLSIQIVESYFNTLTPSYN 128
           C+ + L  E  N ++ D +P  C+     Y I   Q+  D     +    Y   L    +
Sbjct: 52  CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKND 111

Query: 129 GLDVVLMDIDDIFASSSKYSNLL---IDRVNVRGYIECIEEAKHLKHMF-TLKLFMKLQV 184
            ++V + D+DD   SS  Y        ++ +   Y   +        +   L L+  +  
Sbjct: 112 TVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIE 171

Query: 185 RGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKE 244
            G   I+LS + +  +N T + L +AG   W  LI++  N   +    Y S+ R  L K+
Sbjct: 172 LGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILK-PNGSNLRQVVYKSKVRKSLVKK 230

Query: 245 GFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
           G++I G I +Q   L+  + G RVFKLPNPLYY
Sbjct: 231 GYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 262

May function as somatic storage protein during early seedling development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
224109384	285	predicted protein [Populus trichocarpa]	0.917	0.933	0.601	2e-86
225449218	308	PREDICTED: uncharacterized protein At2g3	0.979	0.922	0.578	9e-86
449521679	306	PREDICTED: uncharacterized protein At2g3	0.937	0.888	0.491	2e-77
449465029	306	PREDICTED: uncharacterized protein At2g3	0.937	0.888	0.485	5e-77
356537972	298	PREDICTED: uncharacterized protein At2g3	0.958	0.932	0.481	1e-72
357461141	307	hypothetical protein MTR_3g070090 [Medic	0.979	0.925	0.471	2e-69
356569321	304	PREDICTED: uncharacterized protein At2g3	0.975	0.930	0.460	3e-67
356551538	299	PREDICTED: uncharacterized protein At2g3	0.955	0.926	0.408	1e-61
357492537	297	hypothetical protein MTR_5g081740 [Medic	0.944	0.922	0.432	2e-57
217074214	297	unknown [Medicago truncatula]	0.944	0.922	0.432	4e-57

>gi|224109384|ref|XP_002315179.1| predicted protein [Populus trichocarpa] gi|222864219|gb|EEF01350.1| predicted protein [Populus trichocarpa]

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 160/266 (60%), Positives = 206/266 (77%)

Query: 22  GSVIFIGGLITVGVLLITLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELN 81
            + IFI  L+TVGVLL TLLV+LAVMLQSCQ+RS GV+E+ K S D NYCK+FALHAELN
Sbjct: 17  AATIFIASLVTVGVLLTTLLVSLAVMLQSCQDRSKGVIEIQKLSHDYNYCKMFALHAELN 76

Query: 82  SLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIF 141
           SL  D+ P +C  LA+++ K G + RDLN S+ ++E YF++L P ++GLDV+LMDIDDIF
Sbjct: 77  SLGPDDFPSMCASLAVQHNKGGAYERDLNASLLMIERYFDSLLPLHDGLDVLLMDIDDIF 136

Query: 142 ASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRN 201
            S+ +Y++LL++RV   G I+C +E KHLK +  L L+ KLQ  GW +ILLSRK E  RN
Sbjct: 137 PSNIRYTSLLMNRVRDNGCIDCFQEEKHLKQILCLSLYTKLQASGWSLILLSRKPEKLRN 196

Query: 202 ATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIG 261
           AT + LISAGYRGWSS IMR DNE+++DSREY SRR   +QK GF I+G+IS+QMDAL  
Sbjct: 197 ATIQHLISAGYRGWSSTIMRSDNEIEIDSREYFSRRMVAMQKAGFRISGVISSQMDALTS 256

Query: 262 QSLGKRVFKLPNPLYYSFDHHIESTK 287
            SLG RVFKLPNP+YY+F+HH  +++
Sbjct: 257 ASLGHRVFKLPNPVYYNFEHHTGNSR 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449218|ref|XP_002279793.1| PREDICTED: uncharacterized protein At2g39920 [Vitis vinifera] gi|296086101|emb|CBI31542.3| unnamed protein product [Vitis vinifera]

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 177/306 (57%), Positives = 215/306 (70%), Gaps = 22/306 (7%)

Query: 1   MSAYAHQMERQLSSQSLSS-RGGS-------------------VIFIGGLITVGVLLITL 40
           MSAYAHQMER+ S+QSLSS RGGS                    IFIG L T+GVLLITL
Sbjct: 1   MSAYAHQMEREYSTQSLSSSRGGSDMGSHYVVESGIYMTSFAATIFIGALTTIGVLLITL 60

Query: 41  LVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYI 100
           L+ L VMLQSCQ   SG V+ +KSS   +YCK+F LHAE+NSLE +  P +C+  AI+YI
Sbjct: 61  LIALVVMLQSCQIERSGAVDSSKSSDYYSYCKIFTLHAEINSLEVNEFPSVCKDFAIQYI 120

Query: 101 KEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGY 160
           KEGQ+A+D   ++ + E YF+T+TP  +GLD +L+DIDD  +S+  Y+NL   R +  G 
Sbjct: 121 KEGQYAKDFKFTMWLAEKYFSTVTPLGDGLDALLLDIDDFHSSNPLYNNLY--RFDQNGC 178

Query: 161 IECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIM 220
            ECIEE K LKH   L+  MKLQ  GW +ILLSRK E QRNAT E L +AGYR WSSLIM
Sbjct: 179 NECIEETKDLKHKLILRFCMKLQAGGWSLILLSRKPEKQRNATIEHLTTAGYRNWSSLIM 238

Query: 221 RLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFD 280
           R D+EMQMD+ EY SR+R ++QKEGF IT +IS  MDAL G SLGKR+FKLPNP+YY FD
Sbjct: 239 RSDDEMQMDTHEYFSRQRGVIQKEGFRITAVISGHMDALTGPSLGKRIFKLPNPMYYKFD 298

Query: 281 HHIEST 286
            HIES 
Sbjct: 299 DHIESA 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521679|ref|XP_004167857.1| PREDICTED: uncharacterized protein At2g39920-like [Cucumis sativus]

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/301 (49%), Positives = 198/301 (65%), Gaps = 29/301 (9%)

Query: 1   MSAYAHQMERQLSSQSLSSRGGS----------------------VIFIGGLITVGVLLI 38
           MSAY ++MERQ S+QS S+ G S                       IF+G L TVGVLLI
Sbjct: 1   MSAYGNEMERQFSTQSHSTGGSSGNSDMGSRYIIESGFYMTPLTATIFVGALATVGVLLI 60

Query: 39  TLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIR 98
           TLLV+L VMLQ CQNRS GVVE+ +SS D +YCK  ++H ELNSLE D +P  C+  AI+
Sbjct: 61  TLLVSLTVMLQYCQNRSEGVVEIQRSSVDYDYCKALSVHLELNSLETDGIPSFCKEFAIQ 120

Query: 99  YIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVR 158
           YI+ GQ+ RDL+ S+ +V++YF +     NG D+VLMDIDD+  ++  Y+++LI      
Sbjct: 121 YIRSGQYERDLDSSLLVVDNYFCSAAKVDNGQDIVLMDIDDLLFTNRDYNDVLISS---- 176

Query: 159 GYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSL 218
              +C+++AK LK  F LKL+ KL+   WP  L+SRK E  RNAT E L SAGY+GW  L
Sbjct: 177 ---DCVDQAKRLKQNFLLKLYKKLRSCRWPTTLISRKSEVNRNATIEHLTSAGYKGWLQL 233

Query: 219 IMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYS 278
           IMR+D EMQ++   Y SR++  LQ EGF I G+IS+ MDAL   S+G R++KLPNP+Y+ 
Sbjct: 234 IMRMDEEMQINHPVYFSRQQAALQSEGFSIIGVISSHMDALSALSVGTRIYKLPNPMYFK 293

Query: 279 F 279
           +
Sbjct: 294 Y 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465029|ref|XP_004150231.1| PREDICTED: uncharacterized protein At2g39920-like [Cucumis sativus]

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 146/301 (48%), Positives = 198/301 (65%), Gaps = 29/301 (9%)

Query: 1   MSAYAHQMERQLSSQSLSSRGGS----------------------VIFIGGLITVGVLLI 38
           MSAY ++MERQ S+QS S+ G S                       IF+G L TVGVLLI
Sbjct: 1   MSAYGNEMERQFSTQSHSTGGSSGNSDMGSRYIIESGFYMTPLTATIFVGALATVGVLLI 60

Query: 39  TLLVTLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIR 98
           TLLV+L VMLQ CQNRS GVVE+ +SS D +YCK  ++H ELN LE D +P  C+  AI+
Sbjct: 61  TLLVSLTVMLQYCQNRSEGVVEIQRSSVDYDYCKALSVHLELNGLETDGIPSFCKEFAIQ 120

Query: 99  YIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVR 158
           YI+ GQ+ RDL+ S+ +V++YF +     NG D+VLMDIDD+  ++  Y+++LI      
Sbjct: 121 YIRSGQYERDLDSSLLVVDNYFCSAAKVDNGQDIVLMDIDDLLFTNRDYNDVLISS---- 176

Query: 159 GYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSL 218
              +C+++AK LK  F LKL+ KL+   WP  L+SRK E  RNAT E L SAGY+GW  L
Sbjct: 177 ---DCVDQAKKLKQNFLLKLYKKLRSCRWPTTLISRKSEVNRNATIEHLTSAGYKGWLQL 233

Query: 219 IMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYS 278
           IMR+D+EMQ++   Y SR++  LQ EGF + G+IS+ MDAL   S+G R++KLPNP+Y+ 
Sbjct: 234 IMRMDDEMQINHPVYFSRQQAALQSEGFSVIGVISSHMDALSALSVGTRIYKLPNPMYFK 293

Query: 279 F 279
           +
Sbjct: 294 Y 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537972|ref|XP_003537480.1| PREDICTED: uncharacterized protein At2g39920-like [Glycine max]

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/301 (48%), Positives = 198/301 (65%), Gaps = 23/301 (7%)

Query: 1   MSAYAHQMERQLSSQSLS--SRGGS---------------VIFIGGLITVGVLLITLLVT 43
           MSAYAHQME+Q S+ SLS  S  GS                IF+  L+T+GVLLITL+++
Sbjct: 1   MSAYAHQMEQQYSAPSLSDDSETGSHYELESGFFMKSFTATIFVASLVTLGVLLITLVIS 60

Query: 44  LAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEG 103
           L +MLQSCQ++S+GV+EL   +   +YC++++LHAELN+LE  NLP ICR LA+ YIK G
Sbjct: 61  LVIMLQSCQSKSAGVIELLNINDYYSYCRVYSLHAELNNLEGYNLPGICRHLAVHYIKVG 120

Query: 104 QFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIEC 163
           Q+ARDL+L++ +++ YF ++ PS +GLDVVLMDIDDIF  +S  SNL     N      C
Sbjct: 121 QYARDLDLTMSVIDDYFKSVRPSEDGLDVVLMDIDDIFPRNSDSSNLFHSTSN------C 174

Query: 164 IEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLD 223
           I+EAK++K MF  +L+M LQ  GW +ILLSR+    RN T   L SAG R WS+L+MR +
Sbjct: 175 IKEAKNVKLMFVTRLYMYLQTGGWSIILLSREPRTHRNVTINHLDSAGLRSWSALMMRAE 234

Query: 224 NEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHHI 283
           +       EY SR+R +++K+ F I  +IS+ MDA+     G R F LP+PL Y  +  I
Sbjct: 235 DSDPTKGYEYFSRQRNLIRKKSFRIKSIISSHMDAVTVPETGVRNFLLPDPLCYKCEKQI 294

Query: 284 E 284
           E
Sbjct: 295 E 295

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461141|ref|XP_003600852.1| hypothetical protein MTR_3g070090 [Medicago truncatula] gi|355489900|gb|AES71103.1| hypothetical protein MTR_3g070090 [Medicago truncatula]

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/303 (47%), Positives = 197/303 (65%), Gaps = 19/303 (6%)

Query: 1   MSAYAHQMERQLSSQSLSSRG------------------GSVIFIGGLITVGVLLITLLV 42
           MSAYAHQME+Q ++ SLS                      + IF   L+T+GVLLITLLV
Sbjct: 1   MSAYAHQMEQQYAAASLSDDSDTSSSHYGIESGFYMTSLTATIFFASLVTLGVLLITLLV 60

Query: 43  TLAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKE 102
           +L +MLQSCQ++S+GV+EL   +   +YC + +LHAE+N+LE  +LP ICR LAI YIK 
Sbjct: 61  SLTIMLQSCQSKSTGVIELLNINDYYSYCSVHSLHAEINNLEGYDLPNICRDLAIHYIKG 120

Query: 103 GQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIE 162
           G +ARDLN+ + ++  YF ++ PS NGLDVVL+DIDDI   S+ YS+ L  R +      
Sbjct: 121 GYYARDLNIVVSMIIDYFKSMRPSDNGLDVVLLDIDDII-HSNPYSSNLYHRFHNDSISN 179

Query: 163 CIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRL 222
           C++EAK++K MF L+L+M LQ  GW +ILLSR+ E  +N T   L+SAG+R WSSL+MR 
Sbjct: 180 CMKEAKNVKLMFVLRLYMNLQTDGWSIILLSRESEINQNVTINHLVSAGFRSWSSLMMRA 239

Query: 223 DNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHH 282
           ++       EY SR+R+++QK+GFHI  +IS+ +DAL       R F LP  +   F+H 
Sbjct: 240 EDSDSTKGDEYFSRQRSMIQKKGFHIKSIISSHLDALSAPDTRIRNFLLPGLVCDKFEHQ 299

Query: 283 IES 285
           IES
Sbjct: 300 IES 302

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569321|ref|XP_003552851.1| PREDICTED: uncharacterized protein At2g39920-like [Glycine max]

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 139/302 (46%), Positives = 195/302 (64%), Gaps = 19/302 (6%)

Query: 1   MSAYAHQMERQLSSQSLSS---RGG--------------SVIFIGGLITVGVLLITLLVT 43
           MSAYAHQME+Q S+ SLS     GG              + IF+  L+T+GVLLITL+++
Sbjct: 1   MSAYAHQMEQQYSAPSLSDDSETGGHYELESGFFMKSFTATIFVASLVTLGVLLITLVIS 60

Query: 44  LAVMLQSCQNRSSG-VVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKE 102
           L +MLQSCQ++S+G V+EL   +   +YC++++LHAELN+LE  NLP ICR LA+ YIK 
Sbjct: 61  LVIMLQSCQSKSAGGVIELLNINEYYSYCRVYSLHAELNNLEGYNLPRICRDLAVHYIKV 120

Query: 103 GQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIE 162
           GQ+ARDL+L++ +++ YF ++ P+ +GLDVVLMDIDDIF  +S   NL   R        
Sbjct: 121 GQYARDLDLTMSLIDDYFKSVRPAEDGLDVVLMDIDDIFPRNSDSFNLF-HRFYNDSTSN 179

Query: 163 CIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRL 222
           CI+EAK++K MF  +L+M LQ  GW +ILLSR+    RN T   L SAG R WS+L+MR 
Sbjct: 180 CIKEAKNVKLMFVSRLYMYLQTGGWSIILLSREPRTHRNVTINHLDSAGLRSWSALMMRA 239

Query: 223 DNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDHH 282
           ++       EY SR+R +++K+GF I  +IS+ MDA+       R + LP  L   F+  
Sbjct: 240 EDSDPTKGYEYFSRQRNVIRKKGFRIKSIISSHMDAVTVPETEVRNYLLPGHLCDKFEKQ 299

Query: 283 IE 284
           +E
Sbjct: 300 VE 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551538|ref|XP_003544131.1| PREDICTED: uncharacterized protein At2g39920-like [Glycine max]

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 183/301 (60%), Gaps = 24/301 (7%)

Query: 1   MSAYAHQMERQLSSQSLSSRGGSVIFIGGLITVGVLLITLLVTL---------------- 44
           MSAY HQME+  S++SLS  G  +     ++  G  + + + T+                
Sbjct: 1   MSAYGHQMEQMYSARSLSGGGSELRRSSFVLESGFYITSFVATIFVAALAAAGLLLITLL 60

Query: 45  ---AVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIK 101
              A+MLQSCQ+  +G++EL   +   NYCK+++LH +LN+LE  N P +C+ LA++YIK
Sbjct: 61  VSLAMMLQSCQSSHAGIIELQNINDQYNYCKVYSLHVKLNNLEGHNFPSLCKDLAMKYIK 120

Query: 102 EGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYI 161
            GQ+ARDL+ +  ++E YFN++ PS +GLDVVL+DID IF  +   SNL    +N     
Sbjct: 121 GGQYARDLDSTKSVIEDYFNSVRPSDDGLDVVLIDIDGIFPPNPHSSNLFKSSIN----- 175

Query: 162 ECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMR 221
             + EAK+LK M  L+L+M LQ  GW +ILLSR+H  ++N T   L+SAG+R WSSL+M 
Sbjct: 176 NFVLEAKNLKRMLVLRLYMNLQAGGWSIILLSREHGTRQNVTISHLLSAGFRDWSSLMMS 235

Query: 222 LDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYSFDH 281
            ++E      EY SR+R ++Q +GF I  ++S+QMDAL     G R   LP+P++  F+ 
Sbjct: 236 EEDEESTKGNEYFSRQRNVIQTKGFRIKSIMSSQMDALAVADRGIRFVLLPDPIFDKFEQ 295

Query: 282 H 282
            
Sbjct: 296 Q 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492537|ref|XP_003616557.1| hypothetical protein MTR_5g081740 [Medicago truncatula] gi|355517892|gb|AES99515.1| hypothetical protein MTR_5g081740 [Medicago truncatula]

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/298 (43%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 1   MSAYAHQMERQLSSQSLSSRGGS---------------VIFIGGLITVGVLLITLLVTLA 45
           MSAY H+      S S  S  GS                IFI G   +G+LL+TLLV++A
Sbjct: 1   MSAYGHEHMYSTRSLSAGSEMGSSFVLESGFYITSFSATIFIAGFAALGLLLVTLLVSMA 60

Query: 46  VMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQF 105
           +MLQSCQN + G++EL   + D +YCK+ +LHA+LN+LE  N+P IC+ LA++YIK GQ+
Sbjct: 61  MMLQSCQNSNGGIIELRNINNDYSYCKIHSLHAKLNNLEEHNVPNICKDLALQYIKGGQY 120

Query: 106 ARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKY-SNLLIDRVNVRGYIECI 164
           ARDL+ +  ++E YFN + PS +G DVVL+DID +F  +  + SNLL+   N      CI
Sbjct: 121 ARDLDSTKSVIEDYFNGVKPSEDGFDVVLIDIDSLFQWNPPHSSNLLLSISN------CI 174

Query: 165 EEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN 224
            +AK+LK +  L+++  LQ  GW +ILLSR+    +N T   L+ AG+RGWSSL+MR D+
Sbjct: 175 IDAKYLKRVLMLRIYKNLQASGWSIILLSRESGTHQNVTINHLVDAGFRGWSSLMMRADD 234

Query: 225 EMQMDSREYLSRRRTILQKEGFHITGLISNQMDAL--IGQSLGKRVFKLPNPLYYSFD 280
           E      EY SR+R ++Q +GF I  +IS+ +D L       G R F LP+P+   F+
Sbjct: 235 EDSTKENEYFSRQRNVIQTKGFRIKSIISSHVDILTVTDADTGMRKFLLPDPICDMFE 292

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074214|gb|ACJ85467.1| unknown [Medicago truncatula]

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/298 (43%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 1   MSAYAHQMERQLSSQSLSSRGGS---------------VIFIGGLITVGVLLITLLVTLA 45
           MSAY H+      S S  S  GS                IFI G   +G+LL+TLLV++A
Sbjct: 1   MSAYGHEHMYSTRSLSAGSEMGSSFVLESGFYITSFSATIFIAGFAALGLLLVTLLVSMA 60

Query: 46  VMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQF 105
           +MLQSCQN + G++EL   + D +YCK+ +LHA+LN+LE  N+P IC+ LA++YIK GQ+
Sbjct: 61  MMLQSCQNSNGGIIELRNINNDYSYCKIHSLHAKLNNLEEHNVPNICKDLALQYIKGGQY 120

Query: 106 ARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKY-SNLLIDRVNVRGYIECI 164
           ARDL+ +  ++E YFN + PS +G DVVL+DID +F  +  + SNLL+   N      CI
Sbjct: 121 ARDLDSTKSVIEDYFNGVKPSEDGFDVVLIDIDSLFQWNPPHSSNLLLSISN------CI 174

Query: 165 EEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN 224
            +AK+LK +  L+++  LQ  GW +ILLSR+    +N T   L+ AG+RGWSSL+MR D+
Sbjct: 175 IDAKYLKRVLMLRIYKNLQAGGWSIILLSRESGTHQNVTINHLVDAGFRGWSSLMMRADD 234

Query: 225 EMQMDSREYLSRRRTILQKEGFHITGLISNQMDAL--IGQSLGKRVFKLPNPLYYSFD 280
           E      EY SR+R ++Q +GF I  +IS+ +D L       G R F LP+P+   F+
Sbjct: 235 EDSTKENEYFSRQRNVIQTKGFRIKSIISSHVDILTVTDADTGMRKFLLPDPICDMFE 292

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2061201	283	AT2G39920 [Arabidopsis thalian	0.724	0.742	0.412	7.4e-40
TAIR|locus:2118329	256	AT4G29270 [Arabidopsis thalian	0.772	0.875	0.305	1.4e-25
TAIR|locus:2118314	255	AT4G29260 [Arabidopsis thalian	0.751	0.854	0.300	1e-22
TAIR|locus:2172447	272	AT5G44020 [Arabidopsis thalian	0.755	0.805	0.293	1e-22
TAIR|locus:2024102	271	AT1G04040 [Arabidopsis thalian	0.758	0.811	0.284	2.6e-22
TAIR|locus:2064128	251	AT2G38600 [Arabidopsis thalian	0.720	0.832	0.303	3e-21
TAIR|locus:2176267	257	AT5G51260 [Arabidopsis thalian	0.724	0.817	0.280	8.3e-19
TAIR|locus:2117338	260	AT4G25150 [Arabidopsis thalian	0.741	0.826	0.280	2.2e-18
TAIR|locus:2184585	270	VSP1 "AT5G24780" [Arabidopsis	0.744	0.8	0.290	4e-12
TAIR|locus:2184580	265	VSP2 "AT5G24770" [Arabidopsis	0.741	0.811	0.28	7.1e-11

TAIR|locus:2061201 AT2G39920 [Arabidopsis thaliana (taxid:3702)]

 Score = 404 (147.3 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
 Identities = 97/235 (41%), Positives = 144/235 (61%)

Query:    45 AVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADN-LPEICRGLAIRYIKEG 103
             + MLQSC+NR+  +VE  +      YCK+ +LH++LNSL+ ++ LP +CR +A+  IK+G
Sbjct:    62 STMLQSCENRNIAIVEAQRLDESFGYCKILSLHSQLNSLDEESELPLLCRDVALHRIKQG 121

Query:   104 QFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIEC 163
              + R+LN +IQ+  +YF T+ P  +  DVV++DIDD        +NLL ++ +   Y++ 
Sbjct:   122 IYLRELNFTIQMALTYFQTIKPMNDNCDVVVIDIDD--------TNLL-EQDSY--YMKY 170

Query:   164 IEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLD 223
             IEEAKH K +  L L+ KL+ +G+ ++LLSR+ E +RNAT E L S GY  WS LIM  +
Sbjct:   171 IEEAKHQKSILILALYSKLRSQGYSMVLLSRRPETERNATIEQLKSRGYSDWSHLIMSRE 230

Query:   224 NEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQS--LGKRVFKLPNPLY 276
             +  Q   +E L R        G  + G+I N MD L GQ     KR+FKLP+  Y
Sbjct:   231 DTRQ---KEELER--------GHRVIGVIGNHMDVLRGQWNWQSKRLFKLPSLTY 274

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2118329 AT4G29270 [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 70/229 (30%), Positives = 123/229 (53%)

Query:    53 NRSSGVVELTKSSGDNNYCKLFALHAELNSLEADN-LPEICRGLAIRYIKEGQFARDLNL 111
             +R++  ++L +SS   +YC+ + L AE N++     +P  C      YI  GQF +D ++
Sbjct:    27 SRAASFIKLPRSS-IASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDV 85

Query:   112 SIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKY---SNLLIDRVNVRGYIECIEEAK 168
                    Y  T+    +G D  + DID+   S+ +Y   +    +  +   Y E +E+ K
Sbjct:    86 VASYAIDYAKTVKVGGDGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGK 145

Query:   169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM 228
                +  +L+L+  L+  G+ +ILL+ + EG R+ T + L  AGY GW+ L++R  N+   
Sbjct:   146 DPGYDASLRLYKALKKLGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGK 205

Query:   229 DSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
              + +Y S +R+ + KEG+ I G   +Q   L+G ++  R FK+PNP+YY
Sbjct:   206 TATQYKSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYY 254

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2118314 AT4G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 67/223 (30%), Positives = 113/223 (50%)

Query:    59 VELTKSSGDNNYCKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVE 117
             ++L  S G + YC  + L AE N++   D +P IC      Y+   QF  D ++ +    
Sbjct:    32 IKLPGSDG-SRYCDSWRLAAETNNVGTWDLIPSICVDSVAEYLNGDQFLSDYSVIVDYAL 90

Query:   118 SYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLL---IDRVNVRGYIECIEEAKHLKHMF 174
             ++  ++  S +G DV + DID+   ++  Y        +  +   + E +E+        
Sbjct:    91 AFAKSVEISGDGKDVWIFDIDETLLTNIDYYKAHGYGSEPYDDNKFSEWVEQGTAPAFDA 150

Query:   175 TLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYL 234
             +L+L+  L+  G+ +ILL+ + E QR +T   L  AGY GW  L++R  N+    +  Y 
Sbjct:   151 SLRLYNALKKLGFTIILLTGRDEHQRTSTETNLRDAGYSGWERLLLRGPNDQGKSATNYK 210

Query:   235 SRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
             S +R+ L +EGF I G   +Q   L G ++  R FK+PNP+YY
Sbjct:   211 SEQRSKLIEEGFKIRGNSGDQWSDLQGFAVADRSFKVPNPMYY 253

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2172447 AT5G44020 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 68/232 (29%), Positives = 122/232 (52%)

Query:    56 SGVVELTKSSGDNNYCKLFALHAELNSL-EADNLPEICRGLAIRYIKEGQFARDLNLSIQ 114
             +GV  L K+   N YC+ + ++ ELN++ +   +P+ C     +Y+   Q+  D+  ++ 
Sbjct:    42 TGVTSL-KAPNLNGYCESWRVNVELNNIRDFKVVPQECVWFVQKYMTSSQYEDDVERAVD 100

Query:   115 IVESYFNTLT---PSYNGLDVVLMDIDDIFASSSKY--SNLLI--DRVNVRGYIECIEEA 167
                 Y         + +G+D  + DIDD   S+  Y  SN     +++N   + E     
Sbjct:   101 EAILYLGKTCCEKKTCDGMDAWIFDIDDTLLSTIPYHKSNGCFGGEQLNTTKFEEWQNSG 160

Query:   168 KH--LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNE 225
             K   + HM  +KL+ +++ RG+ + L+S + E  R+AT E LI AGY  WS+L++R +++
Sbjct:   161 KAPAVPHM--VKLYHEIRERGFKIFLISSRKEYLRSATVENLIEAGYHSWSNLLLRGEDD 218

Query:   226 MQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
              +    +Y +  RT L   G+ + G++  Q ++  G  + KR FKLPN +YY
Sbjct:   219 EKKSVSQYKADLRTWLTSLGYRVWGVMGAQWNSFSGCPVPKRTFKLPNSIYY 270

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2024102 AT1G04040 [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 66/232 (28%), Positives = 123/232 (53%)

Query:    56 SGVVELTKSSGDNNYCKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQ 114
             +G+V     +    YC+ + ++ E++++   D +P+ C      Y+   Q+  D+  ++ 
Sbjct:    40 NGIVSKGIKTDLKGYCESWRINVEVHNIRKFDVVPQECVSHIKDYMTSSQYKDDVARTVD 99

Query:   115 IVESYFNTLTPSYN---GLDVVLMDIDDIFASSSKY--SNLLI--DRVNVRGYIECIEEA 167
              V  +F ++  S +   G+D  + DIDD   S+  Y   N     +++N   + + I++ 
Sbjct:   100 EVILHFGSMCCSKSKCDGMDAWIFDIDDTLLSTIPYHKKNGFFGGEKLNSTKFEDWIQKK 159

Query:   168 KH--LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNE 225
             K   + HM   KL+  ++ RG  + L+S + E  R+AT + LI AGY GWS+L++R   +
Sbjct:   160 KAPAVPHM--KKLYHDIRERGIKIFLISSRKEYLRSATVDNLIQAGYYGWSNLMLRGLED 217

Query:   226 MQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
              Q + ++Y S +R  L   G+ + G++ +Q  +  G  L +R FKLPN +YY
Sbjct:   218 QQKEVKQYKSEKRKWLMSLGYRVWGVMGDQWSSFAGCPLPRRTFKLPNSIYY 269

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2064128 AT2G38600 [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 65/214 (30%), Positives = 108/214 (50%)

Query:    69 NYCKLFALHAELNSLEADNL-PEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSY 127
             +YC  + L  E N++ A  + P  C      Y+  GQ+ RD+ L++  ++ Y N +    
Sbjct:    36 SYCLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVDQIKVYLNEIILPG 95

Query:   128 NGLDVVLMDIDDIFASSSKYSNLL---IDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQV 184
             +G+D  ++D+DD   S+  Y  L     D  +  G+     + +       L+LF KL  
Sbjct:    96 DGMDAWILDVDDTCFSNVFYYRLKRYGCDPYDPTGFRTWAMKGESPAIQPVLELFYKLIE 155

Query:   185 RGWPVILLS-RKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQK 243
              G+ V L++ R  E  R AT E L + G+ G+  LIMR  +  +  +  Y +R R  + +
Sbjct:   156 TGFKVFLVTGRDEETLRQATLENLHNQGFTGYERLIMRTADNKRQSATTYKTRIRKEMME 215

Query:   244 EGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
             EG+ I G + +Q   L G+  G R FK+PNP+Y+
Sbjct:   216 EGYRIWGNVGDQWSDLQGEYSGDRTFKIPNPMYF 249

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

TAIR|locus:2176267 AT5G51260 [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 60/214 (28%), Positives = 102/214 (47%)

Query:    68 NNYCKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPS 126
             N +C  +   AE+N+L     +P  C      Y+    +  DL    +    +  ++  S
Sbjct:    42 NLHCTTWRFAAEMNNLAPWKTIPVECADYVKDYVMGKGYLTDLERVSEEALIFARSIEFS 101

Query:   127 YNGLDVVLMDIDDIFASSSKY---SNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQ 183
              +G D+ + DID+   S+  Y       ++  +   + + +E         +LKL+ ++ 
Sbjct:   102 GDGKDIWIFDIDETLLSNLPYYIDHGFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVL 161

Query:   184 VRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQK 243
               G+ V LL+ + E  R  T E LI+AG++ W  LI+R   E    +  Y S +R  + K
Sbjct:   162 DLGYKVFLLTGRKESHRLVTVENLINAGFQNWDKLILRSPEEQHKMATLYKSEKRDEMVK 221

Query:   244 EGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
             EG+ I G   +Q   L+G S+ +R FKL NP+YY
Sbjct:   222 EGYRIRGNSGDQWSDLLGTSMSQRSFKLANPMYY 255

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2117338 AT4G25150 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 62/221 (28%), Positives = 107/221 (48%)

Query:    63 KSSGDN-N-YCKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESY 119
             K+  DN N +C  +   AE N+L     +P  C      Y+    +  D+    +  + Y
Sbjct:    38 KNINDNVNLHCTSWRFAAETNNLAPWKTIPAECADYVKDYLMGEGYVVDVERVSEEAKVY 97

Query:   120 FNTLTPSYNGLDVVLMDIDDIFASSSKY---SNLLIDRVNVRGYIECIEEAKHLKHMFTL 176
              ++   + +G D+ + DID+   S+  Y       ++  +   +   +E+        +L
Sbjct:    98 ASSFESNGDGKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSL 157

Query:   177 KLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSR 236
             KL+ K+   G+ VILL+ + E  R  T E L +AG+  W  LI+R  ++    +  Y S 
Sbjct:   158 KLYQKVIHLGYKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATMYKSE 217

Query:   237 RRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
             +R  + KEG+ I G   +Q   L+G ++ +R FKLPNP+YY
Sbjct:   218 KREEMVKEGYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYY 258

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2184585 VSP1 "AT5G24780" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 4.0e-12, P = 4.0e-12
 Identities = 66/227 (29%), Positives = 101/227 (44%)

Query:    60 ELTKSSGDN-NY--CKLFALHAEL-NSLEADNLPEICRGLAIRY-IKEGQFARDLNLSIQ 114
             EL +  G + NY  C+ + L  E  N +  D +P  C+     Y I   Q+  D     +
Sbjct:    43 ELLEKEGLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNK 102

Query:   115 IVESYFNTLTPSYNGLDVVLMDIDDIFASSSKY-SNLLIDRVNVR--GYIECIEEAKHLK 171
                 Y   L    + ++V + D+DD   SS  Y +       N     Y   +E  +   
Sbjct:   103 EAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTP 162

Query:   172 HM-FTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDS 230
              +  TL L+  L   G   I++S + +     T E L + G   W  LI++  N  ++  
Sbjct:   163 GLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILK-PNGSKLTQ 221

Query:   231 REYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
               Y S+ R  L K+G++I G I +Q   L+  + G RVFKLPNPLYY
Sbjct:   222 VVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 267

GO:0003993 "acid phosphatase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;TAS

GO:0008134 "transcription factor binding" evidence=IDA

GO:0006952 "defense response" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2184580 VSP2 "AT5G24770" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 7.1e-11, P = 7.1e-11
 Identities = 63/225 (28%), Positives = 99/225 (44%)

Query:    61 LTKSSGDNNY--CKLFALHAEL-NSLEADNLPEICRGLAIRY-IKEGQFARDLNLSIQIV 116
             L K     NY  C+ + L  E  N ++ D +P  C+     Y I   Q+  D     +  
Sbjct:    40 LEKEKLSINYANCRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEA 99

Query:   117 ESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLL---IDRVNVRGYIECIEEAKHLKHM 173
               Y   L    + ++V + D+DD   SS  Y        ++ +   Y   +        +
Sbjct:   100 YFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGL 159

Query:   174 -FTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSRE 232
                L L+  +   G   I+LS + +  +N T + L +AG   W  LI++  N   +    
Sbjct:   160 PEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILK-PNGSNLRQVV 218

Query:   233 YLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
             Y S+ R  L K+G++I G I +Q   L+  + G RVFKLPNPLYY
Sbjct:   219 YKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 262

GO:0003993 "acid phosphatase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0009753 "response to jasmonic acid stimulus" evidence=TAS

GO:0042538 "hyperosmotic salinity response" evidence=IGI

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0046688 "response to copper ion" evidence=IEP

GO:0009625 "response to insect" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0002213 "defense response to insect" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O04195	Y2992_ARATH	No assigned EC number	0.4261	0.8689	0.8904	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
TIGR01675	229	TIGR01675, plant-AP, plant acid phosphatase	6e-39
pfam03767	213	pfam03767, Acid_phosphat_B, HAD superfamily, subfa	1e-27
TIGR01680	275	TIGR01680, Veg_Stor_Prot, vegetative storage prote	4e-13

>gnl|CDD|130736 TIGR01675, plant-AP, plant acid phosphatase

 Score =  136 bits (343), Expect = 6e-39
 Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 8/229 (3%)

Query: 55  SSGVVELTKSSGDNNYCKLFALHAELNSLEA-DNLPEICRGLAIRYIKEGQFARDLNLSI 113
              ++   K S D  YC+ + L  E N++   D +P  C+     Y+   Q+ RD+   +
Sbjct: 1   VLEILMKEKLSIDYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVV 60

Query: 114 QIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLL---IDRVNVRGYIECIE--EAK 168
                Y  +L  S +G+D  + D+DD   S+  Y        ++ +   +   +    A 
Sbjct: 61  DEAYFYAKSLALSGDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAP 120

Query: 169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM 228
            L     LKL+ K+   G  + LLS + E  RNAT + LI+AG+ GW  LI+R   +   
Sbjct: 121 ALPEG--LKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNK 178

Query: 229 DSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYY 277
               Y S  R  L +EG+ I G I +Q   L+G   G+R FKLPNP+YY
Sbjct: 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGSPPGRRTFKLPNPMYY 227

This model represents a family of acid phosphatase from plants which are most closely related to the (so called) class B non-specific acid phosphatase OlpA (TIGR01533, which is believed to be a 5'-nucleotide phosphatase) and somewhat more distantly to another class B phosphatase, AphA (TIGR01672). Together these three clades define a subfamily (pfam03767) which corresponds to the IIIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. It has been reported that the best substrate for this enzyme that could be found was purine 5'-nucleoside phosphates. This is in concordance with the assignment of the H. influenzae hel protein (from TIGR01533) as a 5'-nucleotidase, however there is presently no other evidence to support this specific function for these plant phosphatases. Many genes from this family have been annotated as vegetative storage proteins due to their close homology with these earlier-characterized gene products which are highly expressed in leaves. There are significant differences however, including expression levels and distribution. The most important difference is the lack in authentic VSPs of the nucleophilic aspartate residue, which is instead replaced by serine, glycine or asparagine. Thus these proteins can not be expected to be active phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. Length = 229

>gnl|CDD|217719 pfam03767, Acid_phosphat_B, HAD superfamily, subfamily IIIB (Acid phosphatase)

 Score =  105 bits (265), Expect = 1e-27
 Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 8/204 (3%)

Query: 81  NSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDI 140
           N      +P  C      Y+   Q++ D    +    +Y        +  D V+ DID+ 
Sbjct: 11  NIRPFKTIPAECVDYVKDYMNGQQYSSDSKAVVDQAYNYAKERELHGDKKDAVVFDIDET 70

Query: 141 FASSSKYSNLLI---DRVNVRGYIECIE--EAKHLKHMFTLKLFMKLQVRGWPVILLSRK 195
             S+S Y        +  +   + E +   EA  L     L+L+  L   G  +  +S +
Sbjct: 71  VLSNSPYYAYHGYGGEPFDPEKFDEWVNKGEAPALPGA--LELYNYLVELGVKIFFVSGR 128

Query: 196 HEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQ 255
            E  R AT E L  AG+ GW  LI+R   +    +  Y S RR  L K+G++I G I +Q
Sbjct: 129 SEDLRAATVENLKKAGFHGWEKLILRGKKDSNKSATSYKSERRKKLVKKGYNIVGNIGDQ 188

Query: 256 MDALIG-QSLGKRVFKLPNPLYYS 278
               +G  + G R FKLPNP+YY 
Sbjct: 189 WSDFLGNGARGIRTFKLPNPMYYI 212

This family proteins includes acid phosphatases and a number of vegetative storage proteins. Length = 213

>gnl|CDD|130741 TIGR01680, Veg_Stor_Prot, vegetative storage protein

 Score = 67.4 bits (164), Expect = 4e-13
 Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 28/205 (13%)

Query: 86  DNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFAS-- 143
           + +PE C      YI+  Q+  D     Q  ++YF       +  D  L +ID    S  
Sbjct: 59  ETIPEECVDATAEYIEGEQYRSDSKTVNQ--QAYFFARDLEVHEKDTFLFNIDGTALSNI 116

Query: 144 ---------SSKYSNLLIDR--VNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILL 192
                    S K+ + L D   VN +G    + E        TLK + KL   G+ +I L
Sbjct: 117 PYYKKHGYGSEKFDSELYDEEFVN-KGEAPALPE--------TLKNYNKLVSLGFKIIFL 167

Query: 193 SRKHEGQRNATTELLISAGYRGWSSLIMR--LDNEMQMDSREYLSRRRTILQKEGFHITG 250
           S + + ++  T   L  AGY  W  LI++   DN  + ++ EY +  R  L +EG++I G
Sbjct: 168 SGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAE-NAVEYKTAARAKLIQEGYNIVG 226

Query: 251 LISNQMDALIGQSLGK-RVFKLPNP 274
           +I +Q + L G+  G  R FKLPNP
Sbjct: 227 IIGDQWNDLKGEHRGAIRSFKLPNP 251

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	100.0
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	100.0
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	100.0
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	100.0
COG2503	274	Predicted secreted acid phosphatase [General funct	100.0
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.79
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.55
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	99.14
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	99.09
PHA02530	300	pseT polynucleotide kinase; Provisional	99.02
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	98.98
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.71
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.33
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.28
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.28
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.06
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.04
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.0
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.98
PRK11587	218	putative phosphatase; Provisional	97.9
PRK13288	214	pyrophosphatase PpaX; Provisional	97.88
PLN02645	311	phosphoglycolate phosphatase	97.88
PRK10444	248	UMP phosphatase; Provisional	97.84
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	97.84
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	97.82
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.82
PRK13226	229	phosphoglycolate phosphatase; Provisional	97.79
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	97.78
COG3700	237	AphA Acid phosphatase (class B) [General function	97.75
PLN02954	224	phosphoserine phosphatase	97.74
COG0546	220	Gph Predicted phosphatases [General function predi	97.73
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.73
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	97.68
PRK13225	273	phosphoglycolate phosphatase; Provisional	97.67
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.62
PRK09449	224	dUMP phosphatase; Provisional	97.62
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.61
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	97.61
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.58
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.58
PRK06769	173	hypothetical protein; Validated	97.57
PRK13222	226	phosphoglycolate phosphatase; Provisional	97.57
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.56
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.56
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	97.54
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	97.53
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.5
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	97.49
PRK13223	272	phosphoglycolate phosphatase; Provisional	97.49
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	97.46
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.45
PLN02940	382	riboflavin kinase	97.43
PLN02575	381	haloacid dehalogenase-like hydrolase	97.3
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.29
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	97.27
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	97.25
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	97.21
PHA02597	197	30.2 hypothetical protein; Provisional	97.2
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.15
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.13
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	97.13
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	97.06
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.06
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.06
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.05
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.03
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.02
PRK10976	266	putative hydrolase; Provisional	96.99
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	96.98
COG4850	373	Uncharacterized conserved protein [Function unknow	96.97
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.96
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	96.96
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.96
PRK01158	230	phosphoglycolate phosphatase; Provisional	96.94
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	96.89
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	96.88
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	96.86
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.86
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	96.84
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.83
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	96.81
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	96.79
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.77
PRK10513	270	sugar phosphate phosphatase; Provisional	96.76
PTZ00174	247	phosphomannomutase; Provisional	96.76
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.73
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	96.72
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	96.72
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.68
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	96.67
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	96.64
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	96.56
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	96.56
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.55
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	96.52
PRK10748	238	flavin mononucleotide phosphatase; Provisional	96.52
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	96.48
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	96.29
PRK08238	479	hypothetical protein; Validated	96.29
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	96.28
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	96.27
PHA03398	303	viral phosphatase superfamily protein; Provisional	96.26
PLN02887	580	hydrolase family protein	96.13
PLN03017	366	trehalose-phosphatase	96.13
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	96.12
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.09
KOG2116	738	consensus Protein involved in plasmid maintenance/	96.03
PRK11133	322	serB phosphoserine phosphatase; Provisional	95.98
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	95.97
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	95.92
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	95.88
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	95.86
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	95.75
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	95.75
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	95.55
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	95.5
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	95.47
PLN02423	245	phosphomannomutase	95.47
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	95.44
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	95.37
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	95.37
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	95.33
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.31
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	95.3
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	95.27
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	95.26
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	95.18
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	95.16
PLN02151	354	trehalose-phosphatase	95.08
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	94.97
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	94.96
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	94.89
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	94.79
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	94.78
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	94.58
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	94.54
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	94.52
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	94.37
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	94.16
COG0241	181	HisB Histidinol phosphatase and related phosphatas	93.95
PLN02580	384	trehalose-phosphatase	93.93
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	93.93
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	93.88
PRK14010	673	potassium-transporting ATPase subunit B; Provision	93.86
PLN02811	220	hydrolase	93.71
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	93.49
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	93.4
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	93.37
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	93.17
PRK01122	679	potassium-transporting ATPase subunit B; Provision	93.15
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	93.09
PF10307	197	DUF2410: Hypothetical protein (DUF2410); InterPro:	92.98
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	92.6
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	92.39
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	92.37
PRK15122	903	magnesium-transporting ATPase; Provisional	92.2
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	91.93
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	91.45
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	91.35
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	91.25
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	91.17
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	91.16
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	91.13
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	90.85
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	90.49
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	90.29
PTZ00445	219	p36-lilke protein; Provisional	90.29
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	90.13
PRK10671	834	copA copper exporting ATPase; Provisional	89.18
KOG1618	389	consensus Predicted phosphatase [General function	89.06
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	88.78
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	88.69
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	88.66
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	88.25
COG5663	194	Uncharacterized conserved protein [Function unknow	88.22
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	88.12
COG4359	220	Uncharacterized conserved protein [Function unknow	87.85
PRK11590	211	hypothetical protein; Provisional	87.75
PRK10563	221	6-phosphogluconate phosphatase; Provisional	87.37
PLN02382	413	probable sucrose-phosphatase	86.99
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	86.21
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	85.74
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	85.12
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	83.38
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	82.18

>TIGR01675 plant-AP plant acid phosphatase

Probab=100.00  E-value=5e-79  Score=553.84  Aligned_cols=222  Identities=30%  Similarity=0.494  Sum_probs=212.7

Q ss_pred             CceeeccCCCCCCcccceehhhhcCCCCCCC-CchhhhHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhCCCCCCCcEEEE
Q 044563           57 GVVELTKSSGDNNYCKLFALHAELNSLEADN-LPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLM  135 (290)
Q Consensus        57 ~~~~~~~~~~~~~~C~swrl~vE~nN~~~w~-vP~~C~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~~~~~g~~AvVf  135 (290)
                      .+++.+..+..++||+||||+||+||+++|+ ||++|++||++||+||||++|++.|+++|..|++++++++||++||||
T Consensus         3 ~~~~~~~~~~~~~~c~swr~~ve~~n~~~~~~vp~~c~~~v~~Y~~~~~Y~~D~~~v~~~a~~y~~~~~~~~dg~~A~V~   82 (229)
T TIGR01675         3 EILMKEKLSIDYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVVDEAYFYAKSLALSGDGMDAWIF   82 (229)
T ss_pred             ceeehhcccCCcCcchhhhhhhhhccccccccCcHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHhhccCCCCcEEEE
Confidence            3555666667789999999999999999997 999999999999999999999999999999999999999999999999


Q ss_pred             eccc-ccccChhhhhhccCC--CCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          136 DIDD-IFASSSKYSNLLIDR--VNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       136 DIDe-tLsn~~y~~~~~~G~--~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      |||| +|+|.|||+.|.+|.  |++++|++|+..+++||+|++++|+++|+++|++|||+|||++.+|++|++||+++||
T Consensus        83 DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~  162 (229)
T TIGR01675        83 DVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGF  162 (229)
T ss_pred             ccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCC
Confidence            9999 999999999998874  9999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCCCcceEEEccCCcccc
Q 044563          213 RGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPNPLYYS  278 (290)
Q Consensus       213 ~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~~g~r~fkLPNPmY~~  278 (290)
                      ++|++|+||+.++.++++++||+++|++|+++||||+++||||||||.|++.|+|+|||||||||+
T Consensus       163 ~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~~~~~RtFKLPNPmYyi  228 (229)
T TIGR01675       163 TGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGSPPGRRTFKLPNPMYYV  228 (229)
T ss_pred             CCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcCCCccCceeeCCCCcccC
Confidence            999999999988888899999999999999999999999999999999999999999999999996

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=100.00  E-value=3.2e-75  Score=538.48  Aligned_cols=226  Identities=26%  Similarity=0.395  Sum_probs=205.5

Q ss_pred             hhhcCCCCceeec-c--C----CCCCCcccceehhhhcCCCCCCC-CchhhhHHHHhhhhhhhhHHHHHHHHHHHHHHHh
Q 044563           50 SCQNRSSGVVELT-K--S----SGDNNYCKLFALHAELNSLEADN-LPEICRGLAIRYIKEGQFARDLNLSIQIVESYFN  121 (290)
Q Consensus        50 ~c~~~~~~~~~~~-~--~----~~~~~~C~swrl~vE~nN~~~w~-vP~~C~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~  121 (290)
                      .|++....+++++ .  .    ...+.||.||||+||+||+++|+ ||++|++||++||+||||++|++.|+++|..|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~swr~~vE~~n~~~w~~vP~~C~~~v~~Y~~ggqY~~D~~~v~~~a~~y~~   94 (275)
T TIGR01680        15 QCHGAAFDMFPLRMNTGYGAGARDPEVKCASWRLAVEAHNIFGFETIPEECVDATAEYIEGEQYRSDSKTVNQQAYFFAR   94 (275)
T ss_pred             ccccchhhhhcccccccccccccCCCCcccceeeeeeecccCCcccCcHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence            4554444455543 1  1    24478999999999999999997 9999999999999999999999999999999998


Q ss_pred             hhCCCCCCCcEEEEeccc-ccccChhhhhhccCC--CCccchH-HHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          122 TLTPSYNGLDVVLMDIDD-IFASSSKYSNLLIDR--VNVRGYI-ECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       122 ~~~~~~~g~~AvVfDIDe-tLsn~~y~~~~~~G~--~~~~~w~-~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ++..  +++||||||||| +|||.|||+.|.+|.  |+++.|+ +|+..+++||+|++++||++++++|++|||||||+|
T Consensus        95 ~~~~--~~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e  172 (275)
T TIGR01680        95 DLEV--HEKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLK  172 (275)
T ss_pred             hCcC--CCCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCch
Confidence            8765  468999999999 888999999998874  8999999 999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHhCCCCCCCcceeecCcc-cCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCCCc-ceEEEccCCc
Q 044563          198 GQRNATTELLISAGYRGWSSLIMRLDNE-MQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLG-KRVFKLPNPL  275 (290)
Q Consensus       198 ~~r~~T~~NL~~~Gy~~~d~LiLR~~~~-~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~~g-~r~fkLPNPm  275 (290)
                      .+|++|++||+++||++|++|+||++++ ..+++++||+++|++++++||||+++||||||||.|++.| +|+|||||||
T Consensus       173 ~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP~  252 (275)
T TIGR01680       173 DKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNPC  252 (275)
T ss_pred             hHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhccCCCccCcceecCCCcc
Confidence            9999999999999999999999998765 4568999999999999999999999999999999999986 7999999999


Q ss_pred             cc
Q 044563          276 YY  277 (290)
Q Consensus       276 Y~  277 (290)
                      |-
T Consensus       253 ~~  254 (275)
T TIGR01680       253 TT  254 (275)
T ss_pred             cc
Confidence            85

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=100.00  E-value=7.6e-63  Score=447.94  Aligned_cols=210  Identities=27%  Similarity=0.464  Sum_probs=182.6

Q ss_pred             CCCcccceehhhhcCCCCCCCCchhhhHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhCCCCCCCcEEEEeccc-ccccCh
Q 044563           67 DNNYCKLFALHAELNSLEADNLPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDD-IFASSS  145 (290)
Q Consensus        67 ~~~~C~swrl~vE~nN~~~w~vP~~C~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~~~~~g~~AvVfDIDe-tLsn~~  145 (290)
                      ...+|.||+++||+|| .+|++ ++|++++.. |+++||.+|+..++.+|..|+..+...+++|+|||||||| +|+|.+
T Consensus        12 ~~~~c~s~~~~~e~~~-~~~~~-~~~~~~~~~-~~~~q~~~e~~a~~~~a~~~a~~~~~~~~~~~avv~DIDeTvLsn~~   88 (229)
T PF03767_consen   12 AALYCASWRLAVETNN-ANWTV-AECVEYVAD-VTWGQYSAEYKALVDQAYNYAKSRLDEADKPPAVVFDIDETVLSNSP   88 (229)
T ss_dssp             ------TCCSSHHHHH-----H-HHHHHTTHH-HHHHHHEHHHHHHHHHHHHHHHHHHHHHTSEEEEEEESBTTTEEHHH
T ss_pred             HHhhhhhccchhhhcc-hHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHhccCCCcEEEEECCcccccCHH
Confidence            3579999999999999 99999 999999999 9999999999999999999999988777899999999999 688888


Q ss_pred             hhhhhccCC--CCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecC
Q 044563          146 KYSNLLIDR--VNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLD  223 (290)
Q Consensus       146 y~~~~~~G~--~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~  223 (290)
                      |+..+.++.  |+++.|++|+..++++|||++++|+++++++|++|||||||++.+|++|++||+++||++|++|+||++
T Consensus        89 y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~  168 (229)
T PF03767_consen   89 YYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPD  168 (229)
T ss_dssp             HHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEE
T ss_pred             HHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccc
Confidence            877766553  899999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cc-cCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccC----CCCcceEEEccCCccccc
Q 044563          224 NE-MQMDSREYLSRRRTILQKEGFHITGLISNQMDALIG----QSLGKRVFKLPNPLYYSF  279 (290)
Q Consensus       224 ~~-~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G----~~~g~r~fkLPNPmY~~w  279 (290)
                      ++ ..++++.||+++|++|+++||+||++|||||+||.|    +..|+|+|||||||||+|
T Consensus       169 ~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPNp~Yg~w  229 (229)
T PF03767_consen  169 KDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSGAKTAGARAERWFKLPNPMYGSW  229 (229)
T ss_dssp             SSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHCTHHHHHHHTTEEE-TTSSSSHH
T ss_pred             cccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhcccccccccceEEEcCCCCCCCC
Confidence            87 666789999999999999999999999999999999    666899999999999999

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=100.00  E-value=3.3e-44  Score=332.69  Aligned_cols=189  Identities=15%  Similarity=0.242  Sum_probs=166.3

Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhCCC-CCCCcEEEEeccc-ccccChhhhhhccC--CCCccchHHHHHhhc
Q 044563           93 RGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPS-YNGLDVVLMDIDD-IFASSSKYSNLLID--RVNVRGYIECIEEAK  168 (290)
Q Consensus        93 ~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~~~-~~g~~AvVfDIDe-tLsn~~y~~~~~~G--~~~~~~w~~Wv~~~~  168 (290)
                      +..+.+|++|++|++++.++++.|+.++++.... .++|+|||||||| +|+|+||+..+..+  .|+++.|++|+..+.
T Consensus        37 ~~~~~w~q~S~Ey~al~~q~~n~A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~  116 (266)
T TIGR01533        37 TMSVAWMQRSAEYKALYLQAYNLAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQ  116 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCC
Confidence            5689999999999999999999999999877643 5778899999999 77999987665543  389999999999999


Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC--CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW--SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~--d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ++++||+++|+++|+++|++|+|+|||++..++.|++||+++|++.+  +++++|+..       .+|..+|+.|+ +||
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-------~~K~~rr~~I~-~~y  188 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-------SSKESRRQKVQ-KDY  188 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-------CCcHHHHHHHH-hcC
Confidence            99999999999999999999999999999999999999999999865  689999532       26888888775 689


Q ss_pred             eEEEEeCCCcccccCC-------------------CCcceEEEccCCccccccccccccCCC
Q 044563          247 HITGLISNQMDALIGQ-------------------SLGKRVFKLPNPLYYSFDHHIESTKFP  289 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~-------------------~~g~r~fkLPNPmY~~we~~~~~~~~~  289 (290)
                      +|+++||||++||.+.                   .||+++|+|||||||+||+..-..+|+
T Consensus       189 ~Ivl~vGD~~~Df~~~~~~~~~~~~r~~~v~~~~~~fG~~~i~lPNp~YG~we~~~~~~~~~  250 (266)
T TIGR01533       189 EIVLLFGDNLLDFDDFFYKDKESQDRQALVLQNQEKFGKKFIILPNPMYGSWEGAIYKGNYK  250 (266)
T ss_pred             CEEEEECCCHHHhhhhhccCcchHHHHHHHHHHHHHhCCCeEEecCCCCcchhhhhcCCCCC
Confidence            9999999999999763                   269999999999999999988666554

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=100.00  E-value=2.5e-38  Score=286.77  Aligned_cols=183  Identities=15%  Similarity=0.252  Sum_probs=157.8

Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHHHHh-hhCCCCCCCcEEEEeccc-ccccChhhhhhc-cC-CCCccchHHHHHhhc
Q 044563           93 RGLAIRYIKEGQFARDLNLSIQIVESYFN-TLTPSYNGLDVVLMDIDD-IFASSSKYSNLL-ID-RVNVRGYIECIEEAK  168 (290)
Q Consensus        93 ~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~-~~~~~~~g~~AvVfDIDe-tLsn~~y~~~~~-~G-~~~~~~w~~Wv~~~~  168 (290)
                      .-.|.+|..+++|++...+.++.|..-++ +.++..++++|||+|||| +|+|+||..... -+ .|+|++|++||.+++
T Consensus        41 ~~~v~w~Q~s~E~~AL~~Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~  120 (274)
T COG2503          41 TMSVNWYQQSAEYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKK  120 (274)
T ss_pred             hhhHHHhhhhHHHHHHHHHHhhhHHHHHHhhhccccCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcc
Confidence            45799999999999999999999999999 666777788899999999 788888743322 12 399999999999999


Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccc-hHHHHHHHHhCCCCCC--CcceeecCcccCcchHHhhHHHHHHHHhcC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-RNATTELLISAGYRGW--SSLIMRLDNEMQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-r~~T~~NL~~~Gy~~~--d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G  245 (290)
                      +.|+||+++|++++.++|++|||||+|+.+. ...|++||++.|+|+.  ++++|..+..       -|+.||+++ +++
T Consensus       121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k-------~Ke~R~~~v-~k~  192 (274)
T COG2503         121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKK-------SKEVRRQAV-EKD  192 (274)
T ss_pred             cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCC-------cHHHHHHHH-hhc
Confidence            9999999999999999999999999998766 9999999999999964  5777773321       477777666 579


Q ss_pred             CeEEEEeCCCcccccCC------------------CCcceEEEccCCccccccccc
Q 044563          246 FHITGLISNQMDALIGQ------------------SLGKRVFKLPNPLYYSFDHHI  283 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~------------------~~g~r~fkLPNPmY~~we~~~  283 (290)
                      |.||+.|||++.||...                  .||++++.|||||||.||.-|
T Consensus       193 ~~iVm~vGDNl~DF~d~~~k~~~~eR~Alv~~~~~~FGk~~Ii~pN~~YG~wE~gi  248 (274)
T COG2503         193 YKIVMLVGDNLDDFGDNAYKKAEAERRALVKQNQKKFGKKFIILPNSMYGGWEGGI  248 (274)
T ss_pred             cceeeEecCchhhhcchhhhhhhHHHHHHHHHHHHHhCceEEEecCCccCcccchh
Confidence            99999999999999763                  279999999999999999877

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.79  E-value=2.2e-19  Score=164.42  Aligned_cols=142  Identities=15%  Similarity=0.151  Sum_probs=103.6

Q ss_pred             CCCc-EEEEeccc-ccccChh--hhhhccCC----C--CccchHHHHHh--hcCcCcHHHHHHHHHHHhCCCeEEEecCC
Q 044563          128 NGLD-VVLMDIDD-IFASSSK--YSNLLIDR----V--NVRGYIECIEE--AKHLKHMFTLKLFMKLQVRGWPVILLSRK  195 (290)
Q Consensus       128 ~g~~-AvVfDIDe-tLsn~~y--~~~~~~G~----~--~~~~w~~Wv~~--~~apaip~~l~l~~~l~~~Gv~V~~iSgR  195 (290)
                      ++|+ ||+||||| +|+|+||  +.++.|+.    |  ++.-|+.|.+.  ..+.+.|++++|+++++++|++|+|||||
T Consensus        60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR  139 (237)
T PRK11009         60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR  139 (237)
T ss_pred             CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence            4444 99999999 7777785  33333321    4  33446666653  34555666999999999999999999999


Q ss_pred             CccchHHHHHHHHh-CCCC--CCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC----CCcceE
Q 044563          196 HEGQRNATTELLIS-AGYR--GWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ----SLGKRV  268 (290)
Q Consensus       196 ~e~~r~~T~~NL~~-~Gy~--~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~----~~g~r~  268 (290)
                      ++..++.|.+||.+ .|+|  .+..+++-.+.       .+|...+..+++  +.+...+||+++||.+.    -.+-|.
T Consensus       140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~-------~~K~~K~~~l~~--~~i~I~IGDs~~Di~aA~~AGi~~I~v  210 (237)
T PRK11009        140 TATKTETVSKTLADDFHIPADNMNPVIFAGDK-------PGQYTKTQWLKK--KNIRIFYGDSDNDITAAREAGARGIRI  210 (237)
T ss_pred             CCcccHHHHHHHHHHcCCCcccceeEEEcCCC-------CCCCCHHHHHHh--cCCeEEEcCCHHHHHHHHHcCCcEEEE
Confidence            99999999999997 8994  33355554332       155566666654  55677899999999764    346778


Q ss_pred             EEccCCcccc
Q 044563          269 FKLPNPLYYS  278 (290)
Q Consensus       269 fkLPNPmY~~  278 (290)
                      +..|||+|-+
T Consensus       211 ~~G~~~~~~~  220 (237)
T PRK11009        211 LRAANSTYKP  220 (237)
T ss_pred             ecCCCCCCCc
Confidence            8999999964

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.55  E-value=1.8e-14  Score=132.09  Aligned_cols=133  Identities=17%  Similarity=0.139  Sum_probs=94.4

Q ss_pred             CcEEEEeccc-ccccChhhhhhccCCC---------CccchHHHHHhhcCcCcHH--HHHHHHHHHhCCCeEEEecCCCc
Q 044563          130 LDVVLMDIDD-IFASSSKYSNLLIDRV---------NVRGYIECIEEAKHLKHMF--TLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       130 ~~AvVfDIDe-tLsn~~y~~~~~~G~~---------~~~~w~~Wv~~~~apaip~--~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      |.||+||||| +|+|+|+. .++...+         ++..|+.|.+...+..+|.  +.+|+++++++|++|+++|||.+
T Consensus        63 p~aViFDlDgTLlDSs~~~-~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~  141 (237)
T TIGR01672        63 PIAVSFDIDDTVLFSSPGF-WRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTP  141 (237)
T ss_pred             CeEEEEeCCCccccCcHHH-hCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4499999999 77778864 2211112         4467999998877766666  99999999999999999999988


Q ss_pred             cchHHHHHHHHh-CCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEE
Q 044563          198 GQRNATTELLIS-AGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFK  270 (290)
Q Consensus       198 ~~r~~T~~NL~~-~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fk  270 (290)
                      ..++.|.++|.+ .|++.+..+++..+....     .|...+..+++  +.|+.++||+.+|+.+. ..|-+.+-
T Consensus       142 ~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~-----~Kp~~~~~l~~--~~i~i~vGDs~~DI~aAk~AGi~~I~  209 (237)
T TIGR01672       142 GKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ-----YQYTKTQWIQD--KNIRIHYGDSDNDITAAKEAGARGIR  209 (237)
T ss_pred             CcCHHHHHHHHHHhCCchheeEEECCCCCCC-----CCCCHHHHHHh--CCCeEEEeCCHHHHHHHHHCCCCEEE
Confidence            778888888875 899876566665433211     23333444443  66678999999999764 33444333

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=99.14  E-value=2.3e-10  Score=95.82  Aligned_cols=75  Identities=8%  Similarity=0.157  Sum_probs=62.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchH---------
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRN---------  201 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~---------  201 (290)
                      .+|+|||||||.+...      +.|.           ..++.+++++.++.++++|+.|+|+|||+...+.         
T Consensus         2 K~i~~DiDGTL~~~~~------~~y~-----------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~   64 (126)
T TIGR01689         2 KRLVMDLDNTITLTEN------GDYA-----------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH   64 (126)
T ss_pred             CEEEEeCCCCcccCCC------Cccc-----------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence            4899999998865310      1121           1468899999999999999999999999988776         


Q ss_pred             ---HHHHHHHhCCCCCCCcceeecC
Q 044563          202 ---ATTELLISAGYRGWSSLIMRLD  223 (290)
Q Consensus       202 ---~T~~NL~~~Gy~~~d~LiLR~~  223 (290)
                         .|.+||.++|+| ++.|+||.+
T Consensus        65 ~~~~t~~wL~k~~ip-Yd~l~~~kp   88 (126)
T TIGR01689        65 TLPIIILWLNQHNVP-YDEIYVGKP   88 (126)
T ss_pred             hHHHHHHHHHHcCCC-CceEEeCCC
Confidence               999999999996 899999985

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>smart00775 LNS2 LNS2 domain

Probab=99.09  E-value=1e-09  Score=94.46  Aligned_cols=126  Identities=19%  Similarity=0.287  Sum_probs=90.5

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh--
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS--  209 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~--  209 (290)
                      .|++||||||.++.-     .|..-+.       .++....|++.+++++++++|++|+|+|||+..+...|.++|..  
T Consensus         1 iVisDIDGTL~~sd~-----~~~~~~~-------~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~   68 (157)
T smart00775        1 IVISDIDGTITKSDV-----LGHVVPI-------IGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIK   68 (157)
T ss_pred             CEEEecCCCCccccc-----ccccccc-------cccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhh
Confidence            489999998887632     1111110       12233468999999999999999999999999999999999999  


Q ss_pred             ---CCCCCCCcceeecCccc--------CcchHHhhHHHHHHHHh----cCCeEEEEeCCCccccc-----CCCCcceEE
Q 044563          210 ---AGYRGWSSLIMRLDNEM--------QMDSREYLSRRRTILQK----EGFHITGLISNQMDALI-----GQSLGKRVF  269 (290)
Q Consensus       210 ---~Gy~~~d~LiLR~~~~~--------~~~~~~yKs~~R~~i~~----~GYrIv~~iGDq~sDl~-----G~~~g~r~f  269 (290)
                         .++|. ..+++++....        ......+|.+.-+.|.+    ++..+++-+||..+|..     |.+. .|.|
T Consensus        69 ~~~~~lp~-g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~-~~i~  146 (157)
T smart00775       69 QDGHNLPH-GPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP-SRIF  146 (157)
T ss_pred             hccccCCC-ceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh-hhEE
Confidence               44653 36777765322        23345688888777876    48899999999999985     4443 4555


Q ss_pred             Ec
Q 044563          270 KL  271 (290)
Q Consensus       270 kL  271 (290)
                      ..
T Consensus       147 ~i  148 (157)
T smart00775      147 TI  148 (157)
T ss_pred             EE
Confidence            43

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.02  E-value=2.1e-09  Score=99.73  Aligned_cols=132  Identities=13%  Similarity=0.136  Sum_probs=96.1

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      .++++++||+||||..+..        ..+  + +|.....+++.|+++++++.|+++|++++++|||++..+..|++||
T Consensus       156 ~~~~~~~~D~dgtl~~~~~--------~~~--~-~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l  224 (300)
T PHA02530        156 GLPKAVIFDIDGTLAKMGG--------RSP--Y-DWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL  224 (300)
T ss_pred             CCCCEEEEECCCcCcCCCC--------CCc--c-chhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence            3467999999997776532        111  1 4666778899999999999999999999999999999999999999


Q ss_pred             HhCC-CC----C--CCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEEc
Q 044563          208 ISAG-YR----G--WSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       208 ~~~G-y~----~--~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                      ...| |-    +  ...++||......++ ...+...-+++....+.+...|||...|..+. ..|-.++-.
T Consensus       225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~-p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v  295 (300)
T PHA02530        225 RQTDIWFDDLIGRPPDMHFQREQGDKRPD-DVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV  295 (300)
T ss_pred             HHcCCchhhhhCCcchhhhcccCCCCCCc-HHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence            9998 21    2  235678876554443 33444444444444689999999999999764 234444433

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=98.98  E-value=2.5e-09  Score=92.69  Aligned_cols=126  Identities=21%  Similarity=0.281  Sum_probs=92.2

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC-
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA-  210 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~-  210 (290)
                      +||+|||||+..+.-     .|...+       ..+++-.-|++.+||++++++|++|+|||+|+..+...|.+||..+ 
T Consensus         1 VVvsDIDGTiT~SD~-----~G~i~~-------~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~   68 (157)
T PF08235_consen    1 VVVSDIDGTITKSDV-----LGHILP-------ILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQ   68 (157)
T ss_pred             CEEEeccCCcCccch-----hhhhhh-------ccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHH
Confidence            489999997666531     122111       1233445688999999999999999999999999999999999999 


Q ss_pred             ----CCCCCCcceeecCc--------ccCcchHHhhHHHHHHHHhc----CCeEEEEeCCCccccc-----CCCCcceEE
Q 044563          211 ----GYRGWSSLIMRLDN--------EMQMDSREYLSRRRTILQKE----GFHITGLISNQMDALI-----GQSLGKRVF  269 (290)
Q Consensus       211 ----Gy~~~d~LiLR~~~--------~~~~~~~~yKs~~R~~i~~~----GYrIv~~iGDq~sDl~-----G~~~g~r~f  269 (290)
                          ++|.. -+++.+..        --.++..+||...-+.|++.    +-.+.+-+|+..+|..     |.+ -.|.|
T Consensus        69 q~~~~lP~G-pv~~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip-~~rIF  146 (157)
T PF08235_consen   69 QQGHNLPDG-PVLLSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP-KSRIF  146 (157)
T ss_pred             hCCccCCCC-CEEECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC-hhhEE
Confidence                88832 33443221        11334568999999999876    8999999999999985     444 24566


Q ss_pred             Ec
Q 044563          270 KL  271 (290)
Q Consensus       270 kL  271 (290)
                      .+
T Consensus       147 ~I  148 (157)
T PF08235_consen  147 II  148 (157)
T ss_pred             EE
Confidence            43

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.71  E-value=3.2e-08  Score=78.13  Aligned_cols=118  Identities=14%  Similarity=0.111  Sum_probs=74.6

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      ++|||+||||.+..-+        ..  .     .....+.|++++++++++++|++|+++|||.   +.....++...|
T Consensus         1 ~~vfD~D~tl~~~~~~--------~~--~-----~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~~~   62 (139)
T cd01427           1 AVLFDLDGTLLDSEPG--------IA--E-----IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEELG   62 (139)
T ss_pred             CeEEccCCceEccCcc--------cc--c-----cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHHcC
Confidence            4899999987664211        00  0     2345788999999999999999999999998   777888888888


Q ss_pred             CCCCCcceeecCc-ccC----------------cchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCCC-cceE
Q 044563          212 YRGWSSLIMRLDN-EMQ----------------MDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSL-GKRV  268 (290)
Q Consensus       212 y~~~d~LiLR~~~-~~~----------------~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~~-g~r~  268 (290)
                      +.....-++-..+ ...                ++....+....+++. ..+.-+..+||+.+|+.-... |.++
T Consensus        63 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~igD~~~d~~~~~~~g~~~  136 (139)
T cd01427          63 LDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG-VDPEEVLMVGDSLNDIEMAKAAGGLG  136 (139)
T ss_pred             CchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcC-CChhhEEEeCCCHHHHHHHHHcCCce
Confidence            7422222221111 111                222223333333332 235668899999999875433 4443

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.33  E-value=2e-06  Score=72.42  Aligned_cols=126  Identities=13%  Similarity=0.194  Sum_probs=78.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc-----------
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-----------  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-----------  199 (290)
                      ++++||+||||.+..-      +.| ...|++|      .+.|++++++++|+++|++++++||.+...           
T Consensus         1 ~~~~~d~dgtl~~~~~------~~~-~~~~~~~------~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~   67 (147)
T TIGR01656         1 PALFLDRDGVINEDTV------SDY-PRSLDDW------QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA   67 (147)
T ss_pred             CeEEEeCCCceeccCC------ccc-CCCHHHe------EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence            4899999998887642      112 1235544      578999999999999999999999976421           


Q ss_pred             -hHHHHHHHHhCCCCCCCcceeec----Cc-ccCcchHHhhHHHHHHHHhcCCeE--EEEeCCCcccccCC-CCcceEEE
Q 044563          200 -RNATTELLISAGYRGWSSLIMRL----DN-EMQMDSREYLSRRRTILQKEGFHI--TGLISNQMDALIGQ-SLGKRVFK  270 (290)
Q Consensus       200 -r~~T~~NL~~~Gy~~~d~LiLR~----~~-~~~~~~~~yKs~~R~~i~~~GYrI--v~~iGDq~sDl~G~-~~g~r~fk  270 (290)
                       ...+.+.|+..|... ...+...    +. ..+++..+   ..+..++..|-..  +.+|||...|+.+. ..|-+++-
T Consensus        68 ~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~KP~~~---~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~  143 (147)
T TIGR01656        68 PNGRVLELLRQLGVAV-DGVLFCPHHPADNCSCRKPKPG---LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVL  143 (147)
T ss_pred             HHHHHHHHHHhCCCce-eEEEECCCCCCCCCCCCCCCHH---HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEE
Confidence             245566788888751 1122211    11 11222221   1222333334333  67899999999875 45777776


Q ss_pred             ccC
Q 044563          271 LPN  273 (290)
Q Consensus       271 LPN  273 (290)
                      +|.
T Consensus       144 i~~  146 (147)
T TIGR01656       144 LVD  146 (147)
T ss_pred             ecC
Confidence            663

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.28  E-value=3.3e-06  Score=69.15  Aligned_cols=120  Identities=12%  Similarity=0.133  Sum_probs=73.2

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc-----hHHHHH
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-----RNATTE  205 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-----r~~T~~  205 (290)
                      ++++||+||||.+...+       .++  |.      ...+.|++.+++++|+++|++++++||+++..     ++...+
T Consensus         1 k~~~~D~dgtL~~~~~~-------~~~--~~------~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~   65 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPY-------VDD--ED------ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR   65 (132)
T ss_pred             CEEEEeCCCceecCCCC-------CCC--HH------HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence            48999999988864211       122  32      23678999999999999999999999998544     455677


Q ss_pred             HHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHH-hcCCeEEEEeCC-CcccccCC-CCcceEE
Q 044563          206 LLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQ-KEGFHITGLISN-QMDALIGQ-SLGKRVF  269 (290)
Q Consensus       206 NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~-~~GYrIv~~iGD-q~sDl~G~-~~g~r~f  269 (290)
                      .|+..|.. ....+... ....++.-.|+...+ ++. -. ..=+.+||| ...|+.+. ..|-+++
T Consensus        66 ~l~~~~l~-~~~~~~~~-~~~KP~~~~~~~~~~-~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i  128 (132)
T TIGR01662        66 RLEELGVP-IDVLYACP-HCRKPKPGMFLEALK-RFNEID-PEESVYVGDQDLTDLQAAKRAGLAFI  128 (132)
T ss_pred             HHHHCCCC-EEEEEECC-CCCCCChHHHHHHHH-HcCCCC-hhheEEEcCCCcccHHHHHHCCCeEE
Confidence            78888875 22223222 111222223433322 221 11 122567999 58999765 3454443

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.28  E-value=4.7e-06  Score=66.74  Aligned_cols=57  Identities=21%  Similarity=0.315  Sum_probs=49.1

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      ++||+||||-+.                        ..++|++.+++++|+++|.+++|+||.+...++.-.+-|++.|+
T Consensus         1 ~l~D~dGvl~~g------------------------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi   56 (101)
T PF13344_consen    1 FLFDLDGVLYNG------------------------NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI   56 (101)
T ss_dssp             EEEESTTTSEET------------------------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred             CEEeCccEeEeC------------------------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence            689999987652                        25699999999999999999999999999999999999999999


Q ss_pred             C
Q 044563          213 R  213 (290)
Q Consensus       213 ~  213 (290)
                      +
T Consensus        57 ~   57 (101)
T PF13344_consen   57 P   57 (101)
T ss_dssp             T
T ss_pred             C
Confidence            7

...

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.06  E-value=2.5e-05  Score=70.36  Aligned_cols=100  Identities=19%  Similarity=0.226  Sum_probs=62.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      ..+.||+.++++.|+++|+++.++||-.   +.....-|...|+..+ +.++--.+....|+ .-.|.    ..++..|.
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~----~~~~~~~~  164 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAH---PHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQ----AVAEHTGL  164 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcC---HHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHH----HHHHHcCC
Confidence            6789999999999999999999999954   3334445677786543 44443222222222 22232    22333343


Q ss_pred             eE--EEEeCCCcccccCC-CCcceE-EEccCCc
Q 044563          247 HI--TGLISNQMDALIGQ-SLGKRV-FKLPNPL  275 (290)
Q Consensus       247 rI--v~~iGDq~sDl~G~-~~g~r~-fkLPNPm  275 (290)
                      ..  ...|||...|+.+. ..|-++ +-++||.
T Consensus       165 ~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~  197 (224)
T PRK14988        165 KAERTLFIDDSEPILDAAAQFGIRYCLGVTNPD  197 (224)
T ss_pred             ChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence            32  56899999999765 356654 4467754

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.04  E-value=2.2e-05  Score=72.43  Aligned_cols=63  Identities=16%  Similarity=0.168  Sum_probs=52.9

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ++++||+||||-+...                    ....++|++.++++.|+++|.+++|+|||+...++...+-|++.
T Consensus         2 k~i~~D~DGtl~~~~~--------------------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~   61 (257)
T TIGR01458         2 KGVLLDISGVLYISDA--------------------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL   61 (257)
T ss_pred             CEEEEeCCCeEEeCCC--------------------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc
Confidence            3799999998865310                    00126889999999999999999999999998888999999999


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |++
T Consensus        62 g~~   64 (257)
T TIGR01458        62 GFD   64 (257)
T ss_pred             CCC
Confidence            996

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.00  E-value=4.5e-05  Score=66.37  Aligned_cols=98  Identities=14%  Similarity=0.113  Sum_probs=62.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.|+++|+++.++||-+.   ......|+..|+.. ++.++-...-...|. .-.|+...    .+.|
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~---~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~----~~~~  162 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSP---AMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLAL----EALG  162 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHH----HHhC
Confidence            467889999999999999999999999663   44556677788753 344443322222222 22233322    2223


Q ss_pred             C--eEEEEeCCCcccccCC-CCcceEEEcc
Q 044563          246 F--HITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                      .  .=+..|||...|+.+. ..|-+++-+.
T Consensus       163 ~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~  192 (198)
T TIGR01428       163 VPPDEVLFVASNPWDLGGAKKFGFKTAWVN  192 (198)
T ss_pred             CChhhEEEEeCCHHHHHHHHHCCCcEEEec
Confidence            2  2256899999999875 3566555543

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.98  E-value=5.8e-06  Score=72.57  Aligned_cols=95  Identities=16%  Similarity=0.193  Sum_probs=61.5

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc----chHHHHHHHHhC-CCCCCCcceeecCcccCcchHHhhHHHHHHH
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG----QRNATTELLISA-GYRGWSSLIMRLDNEMQMDSREYLSRRRTIL  241 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~----~r~~T~~NL~~~-Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i  241 (290)
                      ...+|+||+++.+++|.+.|..+++||.|+..    ....|.+||.++ |...++.+++-..          |+    .+
T Consensus        70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~----------K~----~v  135 (191)
T PF06941_consen   70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD----------KT----LV  135 (191)
T ss_dssp             TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS----------GG----GC
T ss_pred             cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC----------CC----eE
Confidence            36799999999999999999999999999865    578999999999 3223677777421          21    11


Q ss_pred             HhcCCeEEEEeCCCcccccCC-CCcceEEEccCCcccccc
Q 044563          242 QKEGFHITGLISNQMDALIGQ-SLGKRVFKLPNPLYYSFD  280 (290)
Q Consensus       242 ~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNPmY~~we  280 (290)
                         +..  ..|.|+..-+... ..|-..+.+..|-=..++
T Consensus       136 ---~~D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~  170 (191)
T PF06941_consen  136 ---GGD--VLIDDRPHNLEQFANAGIPVILFDQPYNRDES  170 (191)
T ss_dssp             -----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT--
T ss_pred             ---ecc--EEecCChHHHHhccCCCceEEEEcCCCCCCCC
Confidence               223  4689988876542 236667888776544443

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PRK11587 putative phosphatase; Provisional

Probab=97.90  E-value=7.8e-05  Score=66.26  Aligned_cols=99  Identities=12%  Similarity=0.089  Sum_probs=61.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCc-chHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM-DSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.||+.++++.|+++|+++.++||.+..   .+..-|...|+...+.++-.......| +...|.    ..++..|-
T Consensus        81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~---~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~----~~~~~~g~  153 (218)
T PRK11587         81 GITALPGAIALLNHLNKLGIPWAIVTSGSVP---VASARHKAAGLPAPEVFVTAERVKRGKPEPDAYL----LGAQLLGL  153 (218)
T ss_pred             CceeCcCHHHHHHHHHHcCCcEEEEcCCCch---HHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHH----HHHHHcCC
Confidence            4678999999999999999999999997643   445667778875333333221111112 222222    22333332


Q ss_pred             --eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 --HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 --rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                        .=..+|||...|+.+. ..|-+++-+.+
T Consensus       154 ~p~~~l~igDs~~di~aA~~aG~~~i~v~~  183 (218)
T PRK11587        154 APQECVVVEDAPAGVLSGLAAGCHVIAVNA  183 (218)
T ss_pred             CcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence              2256899999999765 34655655544

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=97.88  E-value=0.00012  Score=64.57  Aligned_cols=96  Identities=14%  Similarity=0.201  Sum_probs=60.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcc-cCc-chHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNE-MQM-DSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~-~~~-~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.||+.++++.|+++|+++.++||..   +..+..-|+..|+..+-..++-.++. .++ +...|.    +.+..-|
T Consensus        80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~----~~~~~~~  152 (214)
T PRK13288         80 LVTEYETVYETLKTLKKQGYKLGIVTTKM---RDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVL----KALELLG  152 (214)
T ss_pred             hcccCcCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHH----HHHHHcC
Confidence            34688999999999999999999999986   44566677888876543334332221 112 112222    2233233


Q ss_pred             CeE--EEEeCCCcccccCC-CCcceEEE
Q 044563          246 FHI--TGLISNQMDALIGQ-SLGKRVFK  270 (290)
Q Consensus       246 YrI--v~~iGDq~sDl~G~-~~g~r~fk  270 (290)
                      ...  +.+|||..+|+... ..|-+++-
T Consensus       153 ~~~~~~~~iGDs~~Di~aa~~aG~~~i~  180 (214)
T PRK13288        153 AKPEEALMVGDNHHDILAGKNAGTKTAG  180 (214)
T ss_pred             CCHHHEEEECCCHHHHHHHHHCCCeEEE
Confidence            222  45899999999864 33544443

>PLN02645 phosphoglycolate phosphatase

Probab=97.88  E-value=3e-05  Score=73.36  Aligned_cols=60  Identities=12%  Similarity=0.132  Sum_probs=52.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      -++++||+||||-+..                        .++|++.++++.|+++|.+++|+|||+...+....+-|++
T Consensus        28 ~~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~   83 (311)
T PLN02645         28 VETFIFDCDGVIWKGD------------------------KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES   83 (311)
T ss_pred             CCEEEEeCcCCeEeCC------------------------ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence            4699999999886531                        2478999999999999999999999998888888999999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .||.
T Consensus        84 lGi~   87 (311)
T PLN02645         84 LGLN   87 (311)
T ss_pred             CCCC
Confidence            9997

>PRK10444 UMP phosphatase; Provisional

Probab=97.84  E-value=8.7e-05  Score=68.39  Aligned_cols=59  Identities=17%  Similarity=0.305  Sum_probs=52.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.++||+||||-+.                        ..++|++.++++.|+++|.+++|+|||+-..+....+.|.+.
T Consensus         2 ~~v~~DlDGtL~~~------------------------~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~   57 (248)
T PRK10444          2 KNVICDIDGVLMHD------------------------NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATA   57 (248)
T ss_pred             cEEEEeCCCceEeC------------------------CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence            47999999988653                        145899999999999999999999999998889999999999


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      ||+
T Consensus        58 G~~   60 (248)
T PRK10444         58 GVD   60 (248)
T ss_pred             CCC
Confidence            995

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=97.84  E-value=7.4e-05  Score=63.72  Aligned_cols=92  Identities=12%  Similarity=0.055  Sum_probs=56.6

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCc-chHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQM-DSREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~GY  246 (290)
                      .+++|++++++++|+++|+++.++|+....     ..-|+..|...+ +..+-..+....+ +.-.|+    ..++..|.
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~~-----~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~----~~~~~~~~  156 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASKNA-----PTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFL----AAAEGLGV  156 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCccH-----HHHHHhcCcHhhCcEEEehhhcCCCCCChHHHH----HHHHHcCC
Confidence            368999999999999999999999996431     235778886533 4433222211122 222233    23333343


Q ss_pred             eE--EEEeCCCcccccCCC-CcceEE
Q 044563          247 HI--TGLISNQMDALIGQS-LGKRVF  269 (290)
Q Consensus       247 rI--v~~iGDq~sDl~G~~-~g~r~f  269 (290)
                      ..  +..|||...|+.+.. .|-+++
T Consensus       157 ~~~~~v~vgD~~~di~aA~~aG~~~i  182 (185)
T TIGR01990       157 SPSECIGIEDAQAGIEAIKAAGMFAV  182 (185)
T ss_pred             CHHHeEEEecCHHHHHHHHHcCCEEE
Confidence            22  557999999998753 355544

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=97.82  E-value=4.2e-05  Score=63.75  Aligned_cols=86  Identities=10%  Similarity=0.093  Sum_probs=52.4

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ...+..||+.++++.|+++|+++.++|+++........+.+    +.. .+.++...+.. +++ .-.|..    .+++.
T Consensus        61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----l~~~f~~i~~~~~~~-~Kp~~~~~~~----~~~~~  131 (154)
T TIGR01549        61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----LGDYFDLILGSDEFG-AKPEPEIFLA----ALESL  131 (154)
T ss_pred             hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----HHhcCcEEEecCCCC-CCcCHHHHHH----HHHHc
Confidence            34566799999999999999999999999865544444443    111 23444443222 232 222332    22222


Q ss_pred             CCe-EEEEeCCCcccccC
Q 044563          245 GFH-ITGLISNQMDALIG  261 (290)
Q Consensus       245 GYr-Iv~~iGDq~sDl~G  261 (290)
                      |.. =+..|||...|+..
T Consensus       132 ~~~~~~l~iGDs~~Di~a  149 (154)
T TIGR01549       132 GLPPEVLHVGDNLNDIEG  149 (154)
T ss_pred             CCCCCEEEEeCCHHHHHH
Confidence            332 25689999999864

HAD subfamilies caused by an overly broad single model.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.82  E-value=3.9e-05  Score=71.25  Aligned_cols=59  Identities=12%  Similarity=0.144  Sum_probs=51.8

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ++|+|||||||-+.                        ..++|++.++++.|+++|++++++|||+...+....+.|++.
T Consensus         3 ~~~~~D~DGtl~~~------------------------~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~   58 (279)
T TIGR01452         3 QGFIFDCDGVLWLG------------------------ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARL   58 (279)
T ss_pred             cEEEEeCCCceEcC------------------------CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence            58999999988553                        135788999999999999999999999988888888999999


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        59 G~~   61 (279)
T TIGR01452        59 GFN   61 (279)
T ss_pred             CCC
Confidence            986

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=97.79  E-value=0.00015  Score=65.16  Aligned_cols=97  Identities=10%  Similarity=0.105  Sum_probs=61.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcchH-HhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDSR-EYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~~-~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.+++++|+++|+++.++||.+.   ..+...|+..|+..+-..+.-.+. ...|+.. .|.    ..+..-|
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~----~~~~~l~  165 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPE---YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLL----VAAERIG  165 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCH---HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHH----HHHHHhC
Confidence            367899999999999999999999999764   455667888887654333333222 1223222 222    2222223


Q ss_pred             Ce--EEEEeCCCcccccCC-CCcceEEEc
Q 044563          246 FH--ITGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       246 Yr--Iv~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                      -.  =+..|||..+|+... ..|-+++-.
T Consensus       166 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v  194 (229)
T PRK13226        166 VAPTDCVYVGDDERDILAARAAGMPSVAA  194 (229)
T ss_pred             CChhhEEEeCCCHHHHHHHHHCCCcEEEE
Confidence            22  267999999999754 345555544

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=97.78  E-value=0.00021  Score=62.81  Aligned_cols=108  Identities=17%  Similarity=0.276  Sum_probs=75.4

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      .|-.++|+|+|+||--                |+      ...+-|.+.+-+..++.+|.+|+++||-+|.   --..++
T Consensus        26 ~Gikgvi~DlDNTLv~----------------wd------~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~---RV~~~~   80 (175)
T COG2179          26 HGIKGVILDLDNTLVP----------------WD------NPDATPELRAWLAELKEAGIKVVVVSNNKES---RVARAA   80 (175)
T ss_pred             cCCcEEEEeccCceec----------------cc------CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHH---HHHhhh
Confidence            5677999999996643                11      1234577888889999999999999995442   334577


Q ss_pred             HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeE--EEEeCCCc-ccccCCC-CcceEEEc
Q 044563          208 ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHI--TGLISNQM-DALIGQS-LGKRVFKL  271 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrI--v~~iGDq~-sDl~G~~-~g~r~fkL  271 (290)
                      .+.|++    -+.|....       +-...|+.|.+-+++.  +.+||||+ .|..|++ .|-|++..
T Consensus        81 ~~l~v~----fi~~A~KP-------~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV  137 (175)
T COG2179          81 EKLGVP----FIYRAKKP-------FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILV  137 (175)
T ss_pred             hhcCCc----eeecccCc-------cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEE
Confidence            788886    34443332       2236777888776654  68999997 5888875 57777653

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.75  E-value=0.00023  Score=63.47  Aligned_cols=143  Identities=15%  Similarity=0.175  Sum_probs=86.4

Q ss_pred             CCcEEEEeccc-ccccChhhhh--hcc--CC----CCccchHHHHHhhc--CcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          129 GLDVVLMDIDD-IFASSSKYSN--LLI--DR----VNVRGYIECIEEAK--HLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       129 g~~AvVfDIDe-tLsn~~y~~~--~~~--G~----~~~~~w~~Wv~~~~--apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      .|-+|-||||+ +|=++|++..  ..|  |.    .++.=|++-.+...  .-|-.-+..|.+.-+++|-+|+|+|||+.
T Consensus        62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~  141 (237)
T COG3700          62 PPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP  141 (237)
T ss_pred             CCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence            34499999999 6777777532  111  11    13333444222222  33445678899999999999999999998


Q ss_pred             cchHHHHHHHHhC-CCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccC----CCCcceEEEcc
Q 044563          198 GQRNATTELLISA-GYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIG----QSLGKRVFKLP  272 (290)
Q Consensus       198 ~~r~~T~~NL~~~-Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G----~~~g~r~fkLP  272 (290)
                      ..-+-+.+-|.+. ....-.-++.-++  ..+...-.|   -..|++++-+|  .-||.-.|+..    +-.|-|...-|
T Consensus       142 gk~d~vsk~Lak~F~i~~m~pv~f~Gd--k~k~~qy~K---t~~i~~~~~~I--hYGDSD~Di~AAkeaG~RgIRilRAa  214 (237)
T COG3700         142 GKTDTVSKTLAKNFHITNMNPVIFAGD--KPKPGQYTK---TQWIQDKNIRI--HYGDSDNDITAAKEAGARGIRILRAA  214 (237)
T ss_pred             CcccccchhHHhhcccCCCcceeeccC--CCCcccccc---cHHHHhcCceE--EecCCchhhhHHHhcCccceeEEecC
Confidence            7666666666543 1211122333322  222212123   34677666665  68999999974    23477778889


Q ss_pred             CCcccc
Q 044563          273 NPLYYS  278 (290)
Q Consensus       273 NPmY~~  278 (290)
                      |.+|-+
T Consensus       215 NSTy~P  220 (237)
T COG3700         215 NSTYKP  220 (237)
T ss_pred             CccCCc
Confidence            988864

>PLN02954 phosphoserine phosphatase

Probab=97.74  E-value=0.00033  Score=61.99  Aligned_cols=94  Identities=17%  Similarity=0.174  Sum_probs=56.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC---CC-cceeecC-------cccCcchHHhhHHH
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG---WS-SLIMRLD-------NEMQMDSREYLSRR  237 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~---~d-~LiLR~~-------~~~~~~~~~yKs~~  237 (290)
                      ....|++.++++.++++|+++.++|+..   +..+..-|+..|++.   +. .+....+       .........-|...
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~---~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~  159 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGF---RQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEA  159 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHH
Confidence            4567999999999999999999999976   445666677888752   11 1111110       00000001124332


Q ss_pred             -HHHHHhcCCeEEEEeCCCcccccCCCCc
Q 044563          238 -RTILQKEGFHITGLISNQMDALIGQSLG  265 (290)
Q Consensus       238 -R~~i~~~GYrIv~~iGDq~sDl~G~~~g  265 (290)
                       ++.++..|+.=+..|||..+|+.....|
T Consensus       160 i~~~~~~~~~~~~i~iGDs~~Di~aa~~~  188 (224)
T PLN02954        160 VQHIKKKHGYKTMVMIGDGATDLEARKPG  188 (224)
T ss_pred             HHHHHHHcCCCceEEEeCCHHHHHhhhcC
Confidence             2233334544456789999999886543

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=97.73  E-value=0.00019  Score=64.32  Aligned_cols=88  Identities=16%  Similarity=0.215  Sum_probs=58.6

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      ..+.|++.+++..|+++|++..++|++++   ..+..-|+..|+..+=..+.-.++ ...|....   .....+++-|..
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~---~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~---~l~~~~~~~~~~  161 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPE---RELDILLKALGLADYFDVIVGGDDVPPPKPDPE---PLLLLLEKLGLD  161 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHHHhCCccccceEEcCCCCCCCCcCHH---HHHHHHHHhCCC
Confidence            46899999999999999999999999875   455566666887655333333122 12222111   222334445555


Q ss_pred             --EEEEeCCCcccccCC
Q 044563          248 --ITGLISNQMDALIGQ  262 (290)
Q Consensus       248 --Iv~~iGDq~sDl~G~  262 (290)
                        =+.+|||...|+...
T Consensus       162 ~~~~l~VGDs~~Di~aA  178 (220)
T COG0546         162 PEEALMVGDSLNDILAA  178 (220)
T ss_pred             hhheEEECCCHHHHHHH
Confidence              467999999999754

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.73  E-value=0.00017  Score=62.16  Aligned_cols=105  Identities=10%  Similarity=-0.050  Sum_probs=59.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCccc-Ccc-----hHHhhHHHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEM-QMD-----SREYLSRRRTI  240 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~-~~~-----~~~yKs~~R~~  240 (290)
                      ..++.|++.++++.++++|++++++|+..   +......|+..|+..+ ...+.-..... .++     ...-|.+.-++
T Consensus        78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~  154 (201)
T TIGR01491        78 EISLRDYAEELVRWLKEKGLKTAIVSGGI---MCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER  154 (201)
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence            46788999999999999999999999986   4455566777786532 11121111000 000     00113222222


Q ss_pred             HH-hcC--CeEEEEeCCCcccccCCC-CcceEEEccCCc
Q 044563          241 LQ-KEG--FHITGLISNQMDALIGQS-LGKRVFKLPNPL  275 (290)
Q Consensus       241 i~-~~G--YrIv~~iGDq~sDl~G~~-~g~r~fkLPNPm  275 (290)
                      +. +.|  ..=+.++||..+|+.... .|.....=|+|.
T Consensus       155 ~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       155 LKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             HHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            22 222  122678899999998543 344333336653

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=97.68  E-value=0.00012  Score=71.09  Aligned_cols=134  Identities=10%  Similarity=0.164  Sum_probs=83.8

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC--------cc---
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH--------EG---  198 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~--------e~---  198 (290)
                      +++++||.||||-..+.  .+    |    +..+  ..+..+.|++.+++++|+++|++++++||.+        +.   
T Consensus         2 ~k~l~lDrDgtl~~~~~--~~----y----~~~~--~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~   69 (354)
T PRK05446          2 QKILFIDRDGTLIEEPP--TD----F----QVDS--LDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFD   69 (354)
T ss_pred             CcEEEEeCCCCccCCCC--cc----c----cccC--cccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHh
Confidence            56999999997766531  10    1    0111  1135789999999999999999999999942        11   


Q ss_pred             -chHHHHHHHHhCCCCCCCcceeecC---c--ccCcchHHhhHHHHHH-HHhcCC--eEEEEeCCCcccccCC-CCcceE
Q 044563          199 -QRNATTELLISAGYRGWSSLIMRLD---N--EMQMDSREYLSRRRTI-LQKEGF--HITGLISNQMDALIGQ-SLGKRV  268 (290)
Q Consensus       199 -~r~~T~~NL~~~Gy~~~d~LiLR~~---~--~~~~~~~~yKs~~R~~-i~~~GY--rIv~~iGDq~sDl~G~-~~g~r~  268 (290)
                       .+..+.+.|...|.. .+..++...   +  ..+++    |.+.-.. +...+.  .=..+|||..+|+.+. ..|-++
T Consensus        70 ~~~~~i~~iL~~~gl~-fd~i~i~~~~~sd~~~~rKP----~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~  144 (354)
T PRK05446         70 PPHNLMMQIFESQGIK-FDEVLICPHFPEDNCSCRKP----KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG  144 (354)
T ss_pred             hHHHHHHHHHHHcCCc-eeeEEEeCCcCcccCCCCCC----CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence             244577788888874 455555421   1  12222    1112212 222222  3366889999999875 456654


Q ss_pred             EEccCCccccccc
Q 044563          269 FKLPNPLYYSFDH  281 (290)
Q Consensus       269 fkLPNPmY~~we~  281 (290)
                      + +.||-...|+.
T Consensus       145 I-~v~~~~~~~~~  156 (354)
T PRK05446        145 I-RYARETLNWDA  156 (354)
T ss_pred             E-EEECCCCCHHH
Confidence            4 66998899984

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=97.67  E-value=0.00018  Score=67.20  Aligned_cols=97  Identities=13%  Similarity=0.147  Sum_probs=63.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC-
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF-  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY-  246 (290)
                      ..++.|++.++++.|+++|+++.++|+..   +..+...|+..|+..+=..+.-.+....+     +...+..++..|. 
T Consensus       140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~---~~~~~~~L~~~gl~~~F~~vi~~~~~~~k-----~~~~~~~l~~~~~~  211 (273)
T PRK13225        140 ALQLFPGVADLLAQLRSRSLCLGILSSNS---RQNIEAFLQRQGLRSLFSVVQAGTPILSK-----RRALSQLVAREGWQ  211 (273)
T ss_pred             cCCcCCCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCChhheEEEEecCCCCCC-----HHHHHHHHHHhCcC
Confidence            34678999999999999999999999975   56777788889976542333222211111     2222333333332 


Q ss_pred             -eEEEEeCCCcccccCC-CCcceEEEcc
Q 044563          247 -HITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       247 -rIv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                       .=+.+|||...|+... ..|-+++-++
T Consensus       212 p~~~l~IGDs~~Di~aA~~AG~~~I~v~  239 (273)
T PRK13225        212 PAAVMYVGDETRDVEAARQVGLIAVAVT  239 (273)
T ss_pred             hhHEEEECCCHHHHHHHHHCCCeEEEEe
Confidence             2367999999999865 3466666554

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.62  E-value=0.00037  Score=63.21  Aligned_cols=67  Identities=19%  Similarity=0.251  Sum_probs=50.6

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      ..++|+||+||||.+.                        ..++|++.+++++|+++|+++.++||.+. .+..-.+-|+
T Consensus         7 ~~~~~~~D~dG~l~~~------------------------~~~~pga~e~L~~L~~~G~~~~ivTN~~~-~~~~~~~~L~   61 (242)
T TIGR01459         7 DYDVFLLDLWGVIIDG------------------------NHTYPGAVQNLNKIIAQGKPVYFVSNSPR-NIFSLHKTLK   61 (242)
T ss_pred             cCCEEEEecccccccC------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCC-ChHHHHHHHH
Confidence            3569999999977653                        13589999999999999999999999653 2333347899


Q ss_pred             hCCCCC-CCccee
Q 044563          209 SAGYRG-WSSLIM  220 (290)
Q Consensus       209 ~~Gy~~-~d~LiL  220 (290)
                      +.|++. +-..++
T Consensus        62 ~~gl~~~~~~~Ii   74 (242)
T TIGR01459        62 SLGINADLPEMII   74 (242)
T ss_pred             HCCCCccccceEE
Confidence            999975 433443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK09449 dUMP phosphatase; Provisional

Probab=97.62  E-value=0.0004  Score=61.45  Aligned_cols=97  Identities=11%  Similarity=0.108  Sum_probs=64.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcchHHhhHHHHHHHHhcCC-
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMDSREYLSRRRTILQKEGF-  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY-  246 (290)
                      .++.|++.++++.|+ .|+++.++||-.   +..+...|...|+.. .+.++...+....|+..   ..-...+++.|- 
T Consensus        94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p---~~~~~~~~~~~~~  166 (224)
T PRK09449         94 CTPLPGAVELLNALR-GKVKMGIITNGF---TELQQVRLERTGLRDYFDLLVISEQVGVAKPDV---AIFDYALEQMGNP  166 (224)
T ss_pred             CccCccHHHHHHHHH-hCCeEEEEeCCc---HHHHHHHHHhCChHHHcCEEEEECccCCCCCCH---HHHHHHHHHcCCC
Confidence            568999999999999 689999999954   456667788888754 35555443222233222   122333444442 


Q ss_pred             --eEEEEeCCCc-ccccCC-CCcceEEEcc
Q 044563          247 --HITGLISNQM-DALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       247 --rIv~~iGDq~-sDl~G~-~~g~r~fkLP  272 (290)
                        .-+..|||.. +|+.+. ..|-+++.++
T Consensus       167 ~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~  196 (224)
T PRK09449        167 DRSRVLMVGDNLHSDILGGINAGIDTCWLN  196 (224)
T ss_pred             CcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence              3477999998 699875 4566666664

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.61  E-value=0.00025  Score=61.32  Aligned_cols=123  Identities=13%  Similarity=0.196  Sum_probs=73.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc------------
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG------------  198 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~------------  198 (290)
                      +++.||.||||-....      +.|.. .+.+     .-++.|++.+++++|+++|++++++||-+..            
T Consensus         2 ~~~~~d~dg~l~~~~~------~~~~~-~~~~-----~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~   69 (161)
T TIGR01261         2 KILFIDRDGTLIEEPP------SDFQV-DALE-----KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG   69 (161)
T ss_pred             CEEEEeCCCCccccCC------Ccccc-CCHH-----HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence            5899999997755421      01111 1111     2367899999999999999999999996421            


Q ss_pred             chHHHHHHHHhCCCCCCCcceee-----cCcccCcchHHhhHHHHHHH-HhcCCeE--EEEeCCCcccccCC-CCcceEE
Q 044563          199 QRNATTELLISAGYRGWSSLIMR-----LDNEMQMDSREYLSRRRTIL-QKEGFHI--TGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       199 ~r~~T~~NL~~~Gy~~~d~LiLR-----~~~~~~~~~~~yKs~~R~~i-~~~GYrI--v~~iGDq~sDl~G~-~~g~r~f  269 (290)
                      .+....+-|.+.|.. .+..+.-     .....+++.    .+....+ +..|-..  ...|||.+.|..+. ..|-.++
T Consensus        70 ~~~~~~~~l~~~gl~-fd~ii~~~~~~~~~~~~~KP~----~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i  144 (161)
T TIGR01261        70 PHNLMLQIFRSQGII-FDDVLICPHFPDDNCDCRKPK----IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI  144 (161)
T ss_pred             HHHHHHHHHHHCCCc-eeEEEECCCCCCCCCCCCCCC----HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence            233455668888986 6555543     111122221    1222222 2233222  67999999999875 3455444


Q ss_pred             E
Q 044563          270 K  270 (290)
Q Consensus       270 k  270 (290)
                      -
T Consensus       145 ~  145 (161)
T TIGR01261       145 Q  145 (161)
T ss_pred             E
Confidence            3

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=97.61  E-value=0.00045  Score=64.02  Aligned_cols=98  Identities=10%  Similarity=0.085  Sum_probs=64.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.|+++|+++.++||.+.   ..+..-|...|+..+ +..+-..+...+|+ .-.|..    .+++-|
T Consensus       107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~---~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~----a~~~l~  179 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHEIPIAVASTRPR---RYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMY----AAERLG  179 (260)
T ss_pred             CcccCCCHHHHHHHHHHCCCEEEEEeCcCH---HHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHH----HHHHhC
Confidence            456799999999999999999999999764   556667788887654 44443322222232 223432    233334


Q ss_pred             CeE--EEEeCCCcccccCC-CCcceEEEcc
Q 044563          246 FHI--TGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 YrI--v~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                      ...  ..+|||...|+... ..|-+++-+.
T Consensus       180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             CChHHeEEEcCCHHHHHHHHHcCCEEEEEe
Confidence            333  56799999999764 3466666654

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.58  E-value=0.00075  Score=57.44  Aligned_cols=93  Identities=8%  Similarity=-0.007  Sum_probs=57.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-Ccce-------------eecCcc---cCcch
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLI-------------MRLDNE---MQMDS  230 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~Li-------------LR~~~~---~~~~~  230 (290)
                      ..+..|++.++++.++++|+++.++|+...   ......|+..|+..+ +.++             ..+...   .....
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~  146 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDGND---FFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPC  146 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCCcH---HHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCC
Confidence            468899999999999999999999999754   334445666676532 2222             000000   00011


Q ss_pred             HHhhHHHHHHHHhcCCeEEEEeCCCcccccCCC
Q 044563          231 REYLSRRRTILQKEGFHITGLISNQMDALIGQS  263 (290)
Q Consensus       231 ~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~  263 (290)
                      -..|.+.-+++.++-+.=+..+||..+|+....
T Consensus       147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~  179 (188)
T TIGR01489       147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAK  179 (188)
T ss_pred             CCCHHHHHHHHHhhcCceEEEECCCcchhchHh
Confidence            123655555555441444668899999998653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.58  E-value=0.00023  Score=61.68  Aligned_cols=72  Identities=11%  Similarity=0.168  Sum_probs=50.4

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccch---------H
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQR---------N  201 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r---------~  201 (290)
                      ..++||+||||-+.....  .+ ..+++.|.        .+.|++.++++.|+++|+++.++||.++..|         .
T Consensus        14 k~~~~D~Dgtl~~~~~~~--~~-~~~~~~~~--------~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~   82 (166)
T TIGR01664        14 KVAAFDLDGTLITTRSGK--VF-PTSASDWR--------FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKN   82 (166)
T ss_pred             cEEEEeCCCceEecCCCC--cc-cCChHHeE--------EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHH
Confidence            589999999776542100  00 12455451        3568999999999999999999999776422         2


Q ss_pred             HHHHHHHhCCCC
Q 044563          202 ATTELLISAGYR  213 (290)
Q Consensus       202 ~T~~NL~~~Gy~  213 (290)
                      .+.+.|+..|.+
T Consensus        83 ~i~~~l~~~gl~   94 (166)
T TIGR01664        83 KIEAFLEKLKVP   94 (166)
T ss_pred             HHHHHHHHcCCC
Confidence            456778899985

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK06769 hypothetical protein; Validated

Probab=97.57  E-value=0.00012  Score=63.61  Aligned_cols=122  Identities=11%  Similarity=0.159  Sum_probs=71.8

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc-----hHHHH
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-----RNATT  204 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-----r~~T~  204 (290)
                      -.+++||.||||.-.++                |.......+.|++.+++++|+++|++++++||-++..     ...+.
T Consensus         4 ~~~~~~d~d~~~~~~~~----------------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~   67 (173)
T PRK06769          4 IQAIFIDRDGTIGGDTT----------------IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFV   67 (173)
T ss_pred             CcEEEEeCCCcccCCCC----------------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHH
Confidence            35999999999842111                1112234678999999999999999999999976421     12344


Q ss_pred             HHHHhCCCCCC-CcceeecCc-ccCcc-hHHhhHHHHHHHHhcCCeE--EEEeCCCcccccCCC-CcceEEEc
Q 044563          205 ELLISAGYRGW-SSLIMRLDN-EMQMD-SREYLSRRRTILQKEGFHI--TGLISNQMDALIGQS-LGKRVFKL  271 (290)
Q Consensus       205 ~NL~~~Gy~~~-d~LiLR~~~-~~~~~-~~~yKs~~R~~i~~~GYrI--v~~iGDq~sDl~G~~-~g~r~fkL  271 (290)
                      +-|+..|+..+ .......++ ..+|+ .-.|+...    ++.|...  ..+|||.+.|+.+.. .|-+++-+
T Consensus        68 ~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~----~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v  136 (173)
T PRK06769         68 QELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAA----EKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV  136 (173)
T ss_pred             HHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHH----HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence            55888887532 111111111 11222 22344332    2223322  679999999998653 35544443

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=97.57  E-value=0.00057  Score=60.09  Aligned_cols=100  Identities=12%  Similarity=0.095  Sum_probs=60.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcc-cCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNE-MQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~-~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.+++.|++++++||..+.   .....|+..|+..+-..++-.+.. ..+. ...|+.. .+++....
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~-~~~~~~~~  166 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTP---FVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLA-CEKLGLDP  166 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHH-HHHcCCCh
Confidence            4678999999999999999999999998753   334677778876543334432221 1111 1112221 12222222


Q ss_pred             CeEEEEeCCCcccccCCC-CcceEEEcc
Q 044563          246 FHITGLISNQMDALIGQS-LGKRVFKLP  272 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~~-~g~r~fkLP  272 (290)
                      .+ +..|||..+|+.+.. .|-.++-++
T Consensus       167 ~~-~i~igD~~~Di~~a~~~g~~~i~v~  193 (226)
T PRK13222        167 EE-MLFVGDSRNDIQAARAAGCPSVGVT  193 (226)
T ss_pred             hh-eEEECCCHHHHHHHHHCCCcEEEEC
Confidence            23 457999999998642 344444444

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.56  E-value=0.00029  Score=60.96  Aligned_cols=122  Identities=12%  Similarity=0.193  Sum_probs=71.9

Q ss_pred             cEEEEecccccccCh-hhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc----------
Q 044563          131 DVVLMDIDDIFASSS-KYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ----------  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~-y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~----------  199 (290)
                      ++++||.||||-..+ .|.         +.++.      ..++|++.+++++|+++|+++.++||.+...          
T Consensus         4 ~~~~~d~~~t~~~~~~~~~---------~~~~~------~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~   68 (181)
T PRK08942          4 KAIFLDRDGVINVDSDGYV---------KSPDE------WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN   68 (181)
T ss_pred             cEEEEECCCCcccCCcccc---------CCHHH------eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence            589999999774443 111         11222      3578999999999999999999999986421          


Q ss_pred             --hHHHHHHHHhCCCCCCCcceeecC---c--ccCc-chHHhhHHHHHHHHhcCCe--EEEEeCCCcccccCC-CCcceE
Q 044563          200 --RNATTELLISAGYRGWSSLIMRLD---N--EMQM-DSREYLSRRRTILQKEGFH--ITGLISNQMDALIGQ-SLGKRV  268 (290)
Q Consensus       200 --r~~T~~NL~~~Gy~~~d~LiLR~~---~--~~~~-~~~~yKs~~R~~i~~~GYr--Iv~~iGDq~sDl~G~-~~g~r~  268 (290)
                        ++.....|++.|+. .+..+....   +  ..+| +...|.    ..++..|..  =+..|||...|+.+. ..|-++
T Consensus        69 ~~~~~~~~~l~~~g~~-f~~i~~~~~~~~~~~~~~KP~p~~~~----~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~  143 (181)
T PRK08942         69 ALHEKMDWSLADRGGR-LDGIYYCPHHPEDGCDCRKPKPGMLL----SIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTP  143 (181)
T ss_pred             HHHHHHHHHHHHcCCc-cceEEECCCCCCCCCcCCCCCHHHHH----HHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence              12334456677863 445443321   0  1122 222232    223333322  245699999999765 345555


Q ss_pred             EEcc
Q 044563          269 FKLP  272 (290)
Q Consensus       269 fkLP  272 (290)
                      +-++
T Consensus       144 i~v~  147 (181)
T PRK08942        144 VLVR  147 (181)
T ss_pred             EEEc
Confidence            5444

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.56  E-value=0.00026  Score=61.22  Aligned_cols=118  Identities=7%  Similarity=0.074  Sum_probs=68.8

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc-----------
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-----------  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-----------  199 (290)
                      +++.||.||||-....|.         ..+++      ..+.|++.+++++|+++|++++++||-++..           
T Consensus         2 ~~~~~D~Dgtl~~~~~~~---------~~~~~------~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~   66 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYV---------HEIDN------FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ   66 (176)
T ss_pred             CEEEEeCCCCEeCCCCCC---------CCHHH------eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence            589999999776422111         11322      3578999999999999999999999977421           


Q ss_pred             -hHHHHHHHHhCCCCCCCcceeec-----------CcccCc-chHHhhHHHHHHHHhcCCeE--EEEeCCCcccccCC-C
Q 044563          200 -RNATTELLISAGYRGWSSLIMRL-----------DNEMQM-DSREYLSRRRTILQKEGFHI--TGLISNQMDALIGQ-S  263 (290)
Q Consensus       200 -r~~T~~NL~~~Gy~~~d~LiLR~-----------~~~~~~-~~~~yKs~~R~~i~~~GYrI--v~~iGDq~sDl~G~-~  263 (290)
                       +......|...|+. .+.++.-.           ....+| +.-.|+..    +++.|-..  ..+|||.+.|+.+. .
T Consensus        67 ~~~~~~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a----~~~~~~~~~~~v~VGDs~~Di~aA~~  141 (176)
T TIGR00213        67 LTEWMDWSLAERDVD-LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQA----RKELHIDMAQSYMVGDKLEDMQAGVA  141 (176)
T ss_pred             HHHHHHHHHHHcCCC-ccEEEECCCCCcccccccCCCCCCCCCHHHHHHH----HHHcCcChhhEEEEcCCHHHHHHHHH
Confidence             12333456666664 44444321           111122 22233332    22223211  34699999999765 3


Q ss_pred             CcceE
Q 044563          264 LGKRV  268 (290)
Q Consensus       264 ~g~r~  268 (290)
                      .|-++
T Consensus       142 aG~~~  146 (176)
T TIGR00213       142 AKVKT  146 (176)
T ss_pred             CCCcE
Confidence            45555

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=97.54  E-value=0.00055  Score=60.34  Aligned_cols=44  Identities=14%  Similarity=0.073  Sum_probs=35.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG  214 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~  214 (290)
                      ..++.|++.++++.++++|++++++||-.   +......|+..|+..
T Consensus        83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~~~i~~  126 (219)
T TIGR00338        83 NLPLTEGAEELVKTLKEKGYKVAVISGGF---DLFAEHVKDKLGLDA  126 (219)
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCCc
Confidence            45689999999999999999999999954   444555666778764

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=97.53  E-value=0.0002  Score=65.65  Aligned_cols=59  Identities=17%  Similarity=0.215  Sum_probs=49.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.++||+||||-+..                        .++|++.+++++|+++|.+++|+||.+...++.-.+-|++.
T Consensus         2 ~~~~~D~DGtl~~~~------------------------~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~   57 (249)
T TIGR01457         2 KGYLIDLDGTMYKGK------------------------ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF   57 (249)
T ss_pred             CEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence            479999999887631                        24678999999999999999999997766677778889999


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |++
T Consensus        58 g~~   60 (249)
T TIGR01457        58 DIP   60 (249)
T ss_pred             CCC
Confidence            986

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.50  E-value=0.00091  Score=58.26  Aligned_cols=89  Identities=15%  Similarity=0.103  Sum_probs=57.0

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC--cceeecCcc-cC--cchHHhhHHHHHHH
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS--SLIMRLDNE-MQ--MDSREYLSRRRTIL  241 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d--~LiLR~~~~-~~--~~~~~yKs~~R~~i  241 (290)
                      ...++.||+.++++.++++ +++.++|+..   +..+...|...|++.+-  .+....++. .+  .....-|....+++
T Consensus        65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~  140 (205)
T PRK13582         65 ATLDPLPGAVEFLDWLRER-FQVVILSDTF---YEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKAL  140 (205)
T ss_pred             HhCCCCCCHHHHHHHHHhc-CCEEEEeCCc---HHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHH
Confidence            4567789999999999999 9999999976   45666788888976431  111111100 00  00112454555566


Q ss_pred             HhcCCeEEEEeCCCccccc
Q 044563          242 QKEGFHITGLISNQMDALI  260 (290)
Q Consensus       242 ~~~GYrIv~~iGDq~sDl~  260 (290)
                      ...+. -+.+|||..+|+.
T Consensus       141 ~~~~~-~~v~iGDs~~D~~  158 (205)
T PRK13582        141 KSLGY-RVIAAGDSYNDTT  158 (205)
T ss_pred             HHhCC-eEEEEeCCHHHHH
Confidence            55554 4568899999974

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=97.49  E-value=0.00045  Score=61.58  Aligned_cols=90  Identities=8%  Similarity=-0.049  Sum_probs=54.2

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcce-----e-------ecCcccCc-----c
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLI-----M-------RLDNEMQM-----D  229 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~Li-----L-------R~~~~~~~-----~  229 (290)
                      ...+..||+.++++.++++|++++++|+-..   ......|+.. ++. +.++     +       +.+.....     .
T Consensus        71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~  145 (219)
T PRK09552         71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMD---FFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHC  145 (219)
T ss_pred             hCCCcCcCHHHHHHHHHHcCCeEEEECCCcH---HHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccC
Confidence            3568899999999999999999999999864   4444555554 432 1111     1       11110000     0


Q ss_pred             hHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCC
Q 044563          230 SREYLSRRRTILQKEGFHITGLISNQMDALIGQS  263 (290)
Q Consensus       230 ~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~  263 (290)
                      . .-|...-+++.....+++ .|||..+|+....
T Consensus       146 ~-~~K~~~l~~~~~~~~~~i-~iGDs~~Di~aa~  177 (219)
T PRK09552        146 G-CCKPSLIRKLSDTNDFHI-VIGDSITDLEAAK  177 (219)
T ss_pred             C-CchHHHHHHhccCCCCEE-EEeCCHHHHHHHH
Confidence            0 114444444444455554 7899999997643

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=97.49  E-value=0.00069  Score=62.90  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=60.4

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcch-HHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDS-REYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~-~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|+++|++++++||.++.   .....|...|+..+-..+.-.+. ...++. ..|+.    .++..|.
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~---~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~----~~~~~g~  172 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPER---FVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLF----VMKMAGV  172 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHH---HHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHH----HHHHhCC
Confidence            467899999999999999999999997643   44566777787544333333221 112221 12322    2333343


Q ss_pred             eE--EEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 HI--TGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 rI--v~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      ..  +..|||+.+|+... ..|-+++-+++
T Consensus       173 ~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~  202 (272)
T PRK13223        173 PPSQSLFVGDSRSDVLAAKAAGVQCVALSY  202 (272)
T ss_pred             ChhHEEEECCCHHHHHHHHHCCCeEEEEec
Confidence            22  45899999999764 34555555543

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=97.46  E-value=0.00054  Score=60.43  Aligned_cols=98  Identities=12%  Similarity=0.105  Sum_probs=62.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC--C-CCcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR--G-WSSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~--~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      .++.||+.++++.|+++|+++.++||.....   ....|+..|..  . ++.++-..+....|+ ...|    +..+++.
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~---~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~----~~a~~~~  158 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDT---AERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLI----LRAMELT  158 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHH----HHHHHHc
Confidence            4789999999999999999999999987543   33455666654  3 344443322222222 2223    2334444


Q ss_pred             CCe---EEEEeCCCcccccCC-CCcceE-EEccC
Q 044563          245 GFH---ITGLISNQMDALIGQ-SLGKRV-FKLPN  273 (290)
Q Consensus       245 GYr---Iv~~iGDq~sDl~G~-~~g~r~-fkLPN  273 (290)
                      |..   =+.+|||.+.|+.+. ..|-++ +-++.
T Consensus       159 ~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~  192 (220)
T TIGR03351       159 GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLT  192 (220)
T ss_pred             CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEec
Confidence            432   367999999999865 456666 55544

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.45  E-value=0.00029  Score=66.18  Aligned_cols=103  Identities=17%  Similarity=0.156  Sum_probs=71.2

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      +..++++||+||||-+.                        ..++|++.++++.|+++|.+++||||.+-..+..=.+.|
T Consensus         6 ~~y~~~l~DlDGvl~~G------------------------~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L   61 (269)
T COG0647           6 DKYDGFLFDLDGVLYRG------------------------NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL   61 (269)
T ss_pred             hhcCEEEEcCcCceEeC------------------------CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence            34679999999987652                        257999999999999999999999999999999888889


Q ss_pred             HhCCCC--CCCcce---------eecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCC
Q 044563          208 ISAGYR--GWSSLI---------MRLDNEMQMDSREYLSRRRTILQKEGFHITGLISN  254 (290)
Q Consensus       208 ~~~Gy~--~~d~Li---------LR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGD  254 (290)
                      ++.|..  .++.++         |+......+=-+.--+.-+.+++..|+.++....+
T Consensus        62 ~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~  119 (269)
T COG0647          62 SSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEP  119 (269)
T ss_pred             HhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCC
Confidence            985544  233332         11111000000011124567788888888876666

>PLN02940 riboflavin kinase

Probab=97.43  E-value=0.00062  Score=66.50  Aligned_cols=101  Identities=18%  Similarity=0.216  Sum_probs=61.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH-hCCCCCCCcceeecCc-ccCcc-hHHhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI-SAGYRGWSSLIMRLDN-EMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~-~~Gy~~~d~LiLR~~~-~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ...+.||+.++++.|+++|+++.++||.++   ..+...|. ..|+..+-..++-.++ ..+++ ...|....+ ++--.
T Consensus        91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~---~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~-~lgv~  166 (382)
T PLN02940         91 NIKALPGANRLIKHLKSHGVPMALASNSPR---ANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAK-RLNVE  166 (382)
T ss_pred             cCCCCcCHHHHHHHHHHCCCcEEEEeCCcH---HHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHH-HcCCC
Confidence            346889999999999999999999999863   34455665 5676544233332222 12222 112222211 12112


Q ss_pred             CCeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          245 GFHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .-+ +..|||...|+.+. ..|-+++-++.
T Consensus       167 p~~-~l~VGDs~~Di~aA~~aGi~~I~v~~  195 (382)
T PLN02940        167 PSN-CLVIEDSLPGVMAGKAAGMEVIAVPS  195 (382)
T ss_pred             hhH-EEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            223 45689999999765 45777777765

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=97.30  E-value=0.0015  Score=64.22  Aligned_cols=98  Identities=14%  Similarity=0.110  Sum_probs=61.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.||+.+++++|+++|+++.++|+++   +..+...|+..|+..|-..++-.++ ...|.. -.|..    .++..|
T Consensus       214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~---~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~----A~~~lg  286 (381)
T PLN02575        214 IYRLRTGSQEFVNVLMNYKIPMALVSTRP---RKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIY----AAQLLN  286 (381)
T ss_pred             CCCcCcCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHH----HHHHcC
Confidence            35789999999999999999999999976   6677778888997655333333222 222222 22322    222233


Q ss_pred             CeE--EEEeCCCcccccCCC-CcceEEEcc
Q 044563          246 FHI--TGLISNQMDALIGQS-LGKRVFKLP  272 (290)
Q Consensus       246 YrI--v~~iGDq~sDl~G~~-~g~r~fkLP  272 (290)
                      ...  ..+|||...|+.... .|-+++-+.
T Consensus       287 l~Peecl~IGDS~~DIeAAk~AGm~~IgV~  316 (381)
T PLN02575        287 FIPERCIVFGNSNQTVEAAHDARMKCVAVA  316 (381)
T ss_pred             CCcccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence            222  456999988887532 244444443

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.29  E-value=0.0012  Score=57.09  Aligned_cols=111  Identities=9%  Similarity=0.150  Sum_probs=66.7

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      .+-+++|+|+|+||....                      ...+.|++.++++.|+++|++++++||.+.  +......+
T Consensus        23 ~~v~~vv~D~Dgtl~~~~----------------------~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~   78 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPD----------------------HNEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVE   78 (170)
T ss_pred             CCCCEEEEecCCccccCC----------------------CCCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHH
Confidence            455799999999766320                      125578999999999999999999999863  23334445


Q ss_pred             HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCc-ccccCC-CCcceEEEc
Q 044563          208 ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQM-DALIGQ-SLGKRVFKL  271 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~-sDl~G~-~~g~r~fkL  271 (290)
                      +..|...+   . .   ...++...|+...++ +.-..-+ +.+|||+. .|+.+. ..|-+++-+
T Consensus        79 ~~~gl~~~---~-~---~~KP~p~~~~~~l~~-~~~~~~~-~l~IGDs~~~Di~aA~~aGi~~i~v  135 (170)
T TIGR01668        79 KALGIPVL---P-H---AVKPPGCAFRRAHPE-MGLTSEQ-VAVVGDRLFTDVMGGNRNGSYTILV  135 (170)
T ss_pred             HHcCCEEE---c-C---CCCCChHHHHHHHHH-cCCCHHH-EEEECCcchHHHHHHHHcCCeEEEE
Confidence            66675421   1 1   111112224332221 1111112 67999998 699876 345554443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=97.27  E-value=0.0011  Score=54.93  Aligned_cols=66  Identities=18%  Similarity=0.175  Sum_probs=43.7

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCC-CccchHHHHHHHHhC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRK-HEGQRNATTELLISA  210 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR-~e~~r~~T~~NL~~~  210 (290)
                      ++|||+|+||...+.-      ..+...    +. ...++.|++.++++.|+++|+++.++|++ ..   ..+..-|+..
T Consensus         2 li~~DlD~Tl~~~~~~------~~~~~~----~~-~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~---~~~~~~l~~~   67 (128)
T TIGR01681         2 VIVFDLDNTLWTGENI------VVGEDP----II-DLEVTIKEIRDKLQTLKKNGFLLALASYNDDP---HVAYELLKIF   67 (128)
T ss_pred             EEEEeCCCCCCCCCcc------cccCCc----ch-hhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCH---HHHHHHHHhc
Confidence            7899999988865310      001000    00 01168999999999999999999999998 43   3344445555


Q ss_pred             C
Q 044563          211 G  211 (290)
Q Consensus       211 G  211 (290)
                      |
T Consensus        68 ~   68 (128)
T TIGR01681        68 E   68 (128)
T ss_pred             c
Confidence            5

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=97.25  E-value=0.0015  Score=56.14  Aligned_cols=94  Identities=10%  Similarity=0.065  Sum_probs=56.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCccc----Ccc-hHHhhHHHHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEM----QMD-SREYLSRRRTIL  241 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~----~~~-~~~yKs~~R~~i  241 (290)
                      ..++.|++.++++.|+   .+++++||.+.   ......|+..|+..+ +.++-......    .|+ .-.|. ...+++
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~---~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~-~~~~~~  154 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDR---AHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE-KALREA  154 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCH---HHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHH-HHHHHh
Confidence            3558899999999997   47999999764   456677888887654 44444322221    122 22233 222233


Q ss_pred             HhcCCeEEEEeCCCcccccCC-CCcceEE
Q 044563          242 QKEGFHITGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       242 ~~~GYrIv~~iGDq~sDl~G~-~~g~r~f  269 (290)
                      -.+.-++ ..|||...|+.+. ..|-+++
T Consensus       155 ~~~~~~~-l~vgD~~~di~aA~~~G~~~i  182 (184)
T TIGR01993       155 GVDPERA-IFFDDSARNIAAAKALGMKTV  182 (184)
T ss_pred             CCCccce-EEEeCCHHHHHHHHHcCCEEe
Confidence            2223344 4899999998754 2344443

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=97.21  E-value=0.0041  Score=61.89  Aligned_cols=98  Identities=8%  Similarity=0.078  Sum_probs=64.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcc--cCcchHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNE--MQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~--~~~~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.||+.+++++|+++|+++.++||.+   +..+.+.|+..|+..|-..++-.++.  .+++. .|...    +++.+
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~---~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~-~~~~a----l~~l~  399 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNGL---TEYLRAIVSYYDLDQWVTETFSIEQINSLNKSD-LVKSI----LNKYD  399 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHHHCCcHhhcceeEecCCCCCCCCcH-HHHHH----HHhcC
Confidence            35778999999999999999999999965   45666778888886553333332221  12222 23322    22223


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      ..=...|||...|+.+. ..|-+++-++.
T Consensus       400 ~~~~v~VGDs~~Di~aAk~AG~~~I~v~~  428 (459)
T PRK06698        400 IKEAAVVGDRLSDINAAKDNGLIAIGCNF  428 (459)
T ss_pred             cceEEEEeCCHHHHHHHHHCCCeEEEEeC
Confidence            33478999999999764 34666665543

>PHA02597 30

Probab=97.20  E-value=0.0018  Score=56.29  Aligned_cols=99  Identities=10%  Similarity=-0.040  Sum_probs=56.7

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHH--HHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhc
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTE--LLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKE  244 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~--NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~  244 (290)
                      ...++.||+.+++++|+++| .++++|+.++.....-.+  +|...+..-++..+--.. ..++     +......+++-
T Consensus        71 ~~~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-~~~k-----p~~~~~a~~~~  143 (197)
T PHA02597         71 RYLSAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-DESK-----EKLFIKAKEKY  143 (197)
T ss_pred             HhccCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc-Cccc-----HHHHHHHHHHh
Confidence            34668999999999999975 688889976543322222  223222111233333222 2222     11222333334


Q ss_pred             CCeEEEEeCCCcccccCCC-C--cceEEEcc
Q 044563          245 GFHITGLISNQMDALIGQS-L--GKRVFKLP  272 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~~-~--g~r~fkLP  272 (290)
                      |-..+..|||...|+.+.. .  |-+++-.+
T Consensus       144 ~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~  174 (197)
T PHA02597        144 GDRVVCFVDDLAHNLDAAHEALSQLPVIHML  174 (197)
T ss_pred             CCCcEEEeCCCHHHHHHHHHHHcCCcEEEec
Confidence            4567889999999998763 3  66665553

2 hypothetical protein; Provisional

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.15  E-value=0.00081  Score=59.57  Aligned_cols=54  Identities=26%  Similarity=0.317  Sum_probs=39.4

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      |++|+||||.+...                       ..++.+.+.+++|+++|++|+++|||+...-   ..-++..|.
T Consensus         2 i~~DlDGTLL~~~~-----------------------~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~---~~~~~~l~~   55 (221)
T TIGR02463         2 VFSDLDGTLLDSHS-----------------------YDWQPAAPWLTRLQEAGIPVILCTSKTAAEV---EYLQKALGL   55 (221)
T ss_pred             EEEeCCCCCcCCCC-----------------------CCcHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHHcCC
Confidence            78999998887421                       1245578899999999999999999986543   333444454

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.13  E-value=0.0017  Score=58.95  Aligned_cols=57  Identities=18%  Similarity=0.299  Sum_probs=42.0

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..+++||||||.+...                       .--|.+.+.+++++++|+.|++.|||+-.   ....-++..
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~---~~~~~~~~l   57 (272)
T PRK10530          4 RVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHV---AIHPFYQAL   57 (272)
T ss_pred             cEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChH---HHHHHHHhc
Confidence            5899999998887421                       12345788899999999999999999853   234455566


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        58 ~~~   60 (272)
T PRK10530         58 ALD   60 (272)
T ss_pred             CCC
Confidence            664

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=97.13  E-value=0.00094  Score=66.42  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=75.5

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH-
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI-  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~-  208 (290)
                      ++.||+|||||+..+-.. .|.+           ...|++=---++.+||-..-..|++|.|+|.|+-.|...|..-|+ 
T Consensus       375 ~kiVVsDiDGTITkSD~~-Ghv~-----------~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrn  442 (580)
T COG5083         375 KKIVVSDIDGTITKSDAL-GHVK-----------QMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRN  442 (580)
T ss_pred             CcEEEEecCCcEEehhhH-HHHH-----------HHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHh
Confidence            457999999987765321 1111           112222233468899999999999999999999999988877666 


Q ss_pred             --hCCCCCCC----------------cceeecCcccCcchHHhhHHHHHHHHhcCCeEE---EEeCCCccccc
Q 044563          209 --SAGYRGWS----------------SLIMRLDNEMQMDSREYLSRRRTILQKEGFHIT---GLISNQMDALI  260 (290)
Q Consensus       209 --~~Gy~~~d----------------~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv---~~iGDq~sDl~  260 (290)
                        ..||.-|+                .||+|.+.       .||-+.-+.|.+.+..-.   +=+|....|..
T Consensus       443 ieQngykLpdgpviLspd~t~aal~relIlrkpE-------~FKiayLndl~slf~e~~PFyAGFGNriTDvi  508 (580)
T COG5083         443 IEQNGYKLPDGPVILSPDRTMAALYRELILRKPE-------VFKIAYLNDLKSLFIEFDPFYAGFGNRITDVI  508 (580)
T ss_pred             hhhcCccCCCCCEeeccchhhhhhhhhhhhcChH-------HHHHHHHHHHHHhhCcCChhhccccccchhhe
Confidence              45776443                34444333       388888888887664433   55677777764

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=97.06  E-value=0.001  Score=60.40  Aligned_cols=57  Identities=23%  Similarity=0.300  Sum_probs=48.7

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh-CC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS-AG  211 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~-~G  211 (290)
                      ++||+||||-+..                        .++|++.+.++.++++|++++|+||-....+....+.|.+ .|
T Consensus         1 ~lfD~DGvL~~~~------------------------~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g   56 (236)
T TIGR01460         1 FLFDIDGVLWLGH------------------------KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLG   56 (236)
T ss_pred             CEEeCcCccCcCC------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence            5899999776531                        3478899999999999999999998888788888899999 68


Q ss_pred             CC
Q 044563          212 YR  213 (290)
Q Consensus       212 y~  213 (290)
                      ++
T Consensus        57 ~~   58 (236)
T TIGR01460        57 VD   58 (236)
T ss_pred             CC
Confidence            75

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.06  E-value=0.0017  Score=59.11  Aligned_cols=55  Identities=20%  Similarity=0.241  Sum_probs=41.8

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      |++|+||||.+...                       ..++.+.+.+++|+++|++|+++|||+-.   ...+-+++.|+
T Consensus         2 i~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~---~~~~~~~~~~~   55 (256)
T TIGR01486         2 IFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAA---EVEYLRKELGL   55 (256)
T ss_pred             EEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHHcCC
Confidence            78999998876410                       12446889999999999999999999854   34556677777


Q ss_pred             C
Q 044563          213 R  213 (290)
Q Consensus       213 ~  213 (290)
                      +
T Consensus        56 ~   56 (256)
T TIGR01486        56 E   56 (256)
T ss_pred             C
Confidence            5

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.06  E-value=0.0019  Score=59.92  Aligned_cols=83  Identities=25%  Similarity=0.253  Sum_probs=58.6

Q ss_pred             cEEEEecccccccChh-------hhh---hc--cCC--C--CccchHHHH----HhhcCc-CcHHHHHHHHHHHhCCCeE
Q 044563          131 DVVLMDIDDIFASSSK-------YSN---LL--IDR--V--NVRGYIECI----EEAKHL-KHMFTLKLFMKLQVRGWPV  189 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y-------~~~---~~--~G~--~--~~~~w~~Wv----~~~~ap-aip~~l~l~~~l~~~Gv~V  189 (290)
                      --||||||+||....-       +..   +.  .+.  .  -.+.+.+|+    ...+.. --+.+.++++.++..|++|
T Consensus        21 tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~~v  100 (252)
T PF11019_consen   21 TLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGIPV  100 (252)
T ss_pred             eEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCCcE
Confidence            4799999997766531       100   11  010  1  124466776    333333 3356778999999999999


Q ss_pred             EEecCCCccchHHHHHHHHhCCCC
Q 044563          190 ILLSRKHEGQRNATTELLISAGYR  213 (290)
Q Consensus       190 ~~iSgR~e~~r~~T~~NL~~~Gy~  213 (290)
                      +-+|.|+...+..|.+.|++.|+.
T Consensus       101 ~alT~~~~~~~~~t~~~Lk~~gi~  124 (252)
T PF11019_consen  101 IALTARGPNMEDWTLRELKSLGID  124 (252)
T ss_pred             EEEcCCChhhHHHHHHHHHHCCCC
Confidence            999999999999999999999974

The function is not known.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.05  E-value=0.00048  Score=60.29  Aligned_cols=107  Identities=12%  Similarity=0.122  Sum_probs=60.8

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      +..+|+||+||||.+..-|..    . +...+..|...  +      -.-++.++++|+++.++|||+.   ..+.+-|+
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~----~-~~~~~~~~~~~--d------~~~i~~L~~~Gi~v~I~T~~~~---~~v~~~l~   83 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMG----N-NGEELKAFNVR--D------GYGIRCLLTSGIEVAIITGRKS---KLVEDRMT   83 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEc----C-CCCEEEEEecc--c------hHHHHHHHHCCCEEEEEeCCCc---HHHHHHHH
Confidence            467999999997776421110    0 01112222110  0      1134566789999999999964   45667788


Q ss_pred             hCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcC--CeEEEEeCCCcccccCC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEG--FHITGLISNQMDALIGQ  262 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G--YrIv~~iGDq~sDl~G~  262 (290)
                      +.|+..+   + ....  .+     -...++.+++.|  ..=+.+|||...|+...
T Consensus        84 ~lgl~~~---f-~g~~--~k-----~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a  128 (183)
T PRK09484         84 TLGITHL---Y-QGQS--NK-----LIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM  128 (183)
T ss_pred             HcCCcee---e-cCCC--cH-----HHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            8887532   2 1111  11     122233333334  33488999999999764

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.03  E-value=0.0024  Score=58.50  Aligned_cols=57  Identities=14%  Similarity=0.158  Sum_probs=42.1

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..+++|+||||.+...                       ..-+.+.+.+++|+++|++|++.|||+-.   ...+-++..
T Consensus         3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~---~~~~~~~~l   56 (272)
T PRK15126          3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVL---EMQHILGAL   56 (272)
T ss_pred             cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHc
Confidence            4899999998876411                       12345788899999999999999999853   334455666


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        57 ~~~   59 (272)
T PRK15126         57 SLD   59 (272)
T ss_pred             CCC
Confidence            765

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.02  E-value=0.0014  Score=57.35  Aligned_cols=55  Identities=18%  Similarity=0.277  Sum_probs=41.1

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      |++||||||.+...                       ..-|.+++.++.|+++|+++++.|||+-.   ....-+...|+
T Consensus         1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~g~~~~i~TGR~~~---~~~~~~~~~~~   54 (254)
T PF08282_consen    1 IFSDLDGTLLNSDG-----------------------KISPETIEALKELQEKGIKLVIATGRSYS---SIKRLLKELGI   54 (254)
T ss_dssp             EEEECCTTTCSTTS-----------------------SSCHHHHHHHHHHHHTTCEEEEECSSTHH---HHHHHHHHTTH
T ss_pred             cEEEECCceecCCC-----------------------eeCHHHHHHHHhhcccceEEEEEccCccc---ccccccccccc
Confidence            68999999877311                       12367999999999999999999999743   34455555565


Q ss_pred             C
Q 044563          213 R  213 (290)
Q Consensus       213 ~  213 (290)
                      .
T Consensus        55 ~   55 (254)
T PF08282_consen   55 D   55 (254)
T ss_dssp             C
T ss_pred             h
Confidence            4

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK10976 putative hydrolase; Provisional

Probab=96.99  E-value=0.0024  Score=58.08  Aligned_cols=57  Identities=16%  Similarity=0.232  Sum_probs=41.4

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.+++|+||||.+...                       .--|.+.+.+++++++|++|++.|||+-..   ...-+...
T Consensus         3 kli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~~~~l   56 (266)
T PRK10976          3 QVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVD---VGQIRDNL   56 (266)
T ss_pred             eEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHhc
Confidence            4899999998887411                       112457888999999999999999998542   33345556


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        57 ~~~   59 (266)
T PRK10976         57 EIK   59 (266)
T ss_pred             CCC
Confidence            664

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=96.98  E-value=0.0031  Score=56.84  Aligned_cols=101  Identities=17%  Similarity=0.173  Sum_probs=65.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch--HHhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS--REYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~--~~yKs~~R~~i~~~  244 (290)
                      ..+++||+.+|++.|+++|+.+...|+.+   |..+...|..+|...+ +..+-..+...+|..  .-.+..+|-. +.-
T Consensus        84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~---~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lg-v~P  159 (221)
T COG0637          84 GLKPIPGVVELLEQLKARGIPLAVASSSP---RRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLG-VDP  159 (221)
T ss_pred             CCCCCccHHHHHHHHHhcCCcEEEecCCh---HHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcC-CCh
Confidence            46899999999999999999999999965   6778888888886533 344433333333322  2122222211 222


Q ss_pred             CCeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          245 GFHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .-.  ..|.|....+..+ ..|-+.|-+||+
T Consensus       160 ~~C--vviEDs~~Gi~Aa~aAGm~vv~v~~~  188 (221)
T COG0637         160 EEC--VVVEDSPAGIQAAKAAGMRVVGVPAG  188 (221)
T ss_pred             HHe--EEEecchhHHHHHHHCCCEEEEecCC
Confidence            223  3578888877654 468889999983

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=96.97  E-value=0.0034  Score=60.43  Aligned_cols=116  Identities=14%  Similarity=0.087  Sum_probs=79.6

Q ss_pred             EEEEecccccccChhhhhhccCCCCc-cchHHHHHh-hcCcCcHHHHHHHHHHHhCC-CeEEEecCCCccchHHHHHHHH
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNV-RGYIECIEE-AKHLKHMFTLKLFMKLQVRG-WPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~-~~w~~Wv~~-~~apaip~~l~l~~~l~~~G-v~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      -+|-|||||+-++.--       -.+ ..|..|... -.-+++||+-.+|+.|.+.| ..|||+|+-+...-+--.+-|-
T Consensus       163 giISDiDDTV~~T~V~-------~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~  235 (373)
T COG4850         163 GIISDIDDTVKVTGVT-------EGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFIT  235 (373)
T ss_pred             eeeeccccceEecccc-------cchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHh
Confidence            6899999988887321       111 236666643 45689999999999999999 8999999998876665566666


Q ss_pred             hCCCCCCCcceeecCc-----ccCcchHHhhHHHHHHHHhcCCeEEEEeCCC
Q 044563          209 SAGYRGWSSLIMRLDN-----EMQMDSREYLSRRRTILQKEGFHITGLISNQ  255 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~-----~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq  255 (290)
                      +.+|| +--++||.-+     -....+..-+...|.-+.+.+-+=+-.+||.
T Consensus       236 ~~~~P-~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p~~kfvLVGDs  286 (373)
T COG4850         236 NRNFP-YGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYPDRKFVLVGDS  286 (373)
T ss_pred             cCCCC-CCchhHhhcCCcccccccchhhhcccHHHHHHHhCCCceEEEecCC
Confidence            77897 4456666332     1112222234556767777776666677875

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.96  E-value=0.0024  Score=57.82  Aligned_cols=55  Identities=16%  Similarity=0.276  Sum_probs=41.4

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .|++|+||||.+..                        ...+++.+.+++++++|+++++.|||+..   ....-+.+.|
T Consensus         1 li~~DlDGTLl~~~------------------------~~~~~~~~ai~~l~~~G~~~vi~TgR~~~---~~~~~~~~lg   53 (225)
T TIGR02461         1 VIFTDLDGTLLPPG------------------------YEPGPAREALEELKDLGFPIVFVSSKTRA---EQEYYREELG   53 (225)
T ss_pred             CEEEeCCCCCcCCC------------------------CCchHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHcC
Confidence            37899999887731                        11356899999999999999999999854   2344566777


Q ss_pred             CC
Q 044563          212 YR  213 (290)
Q Consensus       212 y~  213 (290)
                      +.
T Consensus        54 ~~   55 (225)
T TIGR02461        54 VE   55 (225)
T ss_pred             CC
Confidence            53

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=96.96  E-value=0.0023  Score=52.77  Aligned_cols=92  Identities=15%  Similarity=0.167  Sum_probs=61.4

Q ss_pred             hhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHh
Q 044563          166 EAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQK  243 (290)
Q Consensus       166 ~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~  243 (290)
                      ....++.|++.++++.|+++|++++++||.+   +......|+..|..+ .+.++...+....++ ...|+...+ ++.-
T Consensus        73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~---~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~-~~~~  148 (176)
T PF13419_consen   73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGS---RERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALE-KLGI  148 (176)
T ss_dssp             HGGEEESTTHHHHHHHHHHTTSEEEEEESSE---HHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHH-HHTS
T ss_pred             hhccchhhhhhhhhhhcccccceeEEeecCC---cccccccccccccccccccccccchhhhhhhHHHHHHHHHH-HcCC
Confidence            3678899999999999999999999999996   455667777788653 355555433322332 223433222 2222


Q ss_pred             cCCeEEEEeCCCcccccCC
Q 044563          244 EGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       244 ~GYrIv~~iGDq~sDl~G~  262 (290)
                      ..-+ +..|||...|+.+.
T Consensus       149 ~p~~-~~~vgD~~~d~~~A  166 (176)
T PF13419_consen  149 PPEE-ILFVGDSPSDVEAA  166 (176)
T ss_dssp             SGGG-EEEEESSHHHHHHH
T ss_pred             Ccce-EEEEeCCHHHHHHH
Confidence            2333 56899999999754

...

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.96  E-value=0.0028  Score=58.49  Aligned_cols=57  Identities=19%  Similarity=0.206  Sum_probs=42.8

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..+++||||||.+...                       ...+++.+.+++|+++|+++++.|||+..   ....-++..
T Consensus         5 kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~---~~~~~~~~l   58 (273)
T PRK00192          5 LLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAA---EVEVLRKEL   58 (273)
T ss_pred             eEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHc
Confidence            4899999998887411                       12456888999999999999999999753   344456666


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        59 ~l~   61 (273)
T PRK00192         59 GLE   61 (273)
T ss_pred             CCC
Confidence            764

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=96.94  E-value=0.0018  Score=57.44  Aligned_cols=57  Identities=18%  Similarity=0.184  Sum_probs=40.7

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..+++|+||||.+...                       .--|.+.+.+++++++|++|++.|||+.....   +-++..
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~---~~~~~l   57 (230)
T PRK01158          4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFAR---AAAKLI   57 (230)
T ss_pred             eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHH---HHHHHh
Confidence            4899999998886411                       11245778889999999999999999854322   334455


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |++
T Consensus        58 ~~~   60 (230)
T PRK01158         58 GTS   60 (230)
T ss_pred             CCC
Confidence            654

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=96.89  E-value=0.0079  Score=52.63  Aligned_cols=95  Identities=14%  Similarity=0.200  Sum_probs=59.8

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhc-C
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKE-G  245 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~-G  245 (290)
                      ..+.|+++++++.++++ +++.++||...   +....-|++.|+..+ +..+-..+....++ .-.|.    ..++.. |
T Consensus        96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~---~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~----~~~~~~~~  167 (224)
T TIGR02254        96 HQLLPGAFELMENLQQK-FRLYIVTNGVR---ETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFN----YALERMPK  167 (224)
T ss_pred             CeeCccHHHHHHHHHhc-CcEEEEeCCch---HHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHH----HHHHHhcC
Confidence            57899999999999999 99999999764   344456788887543 44433322222222 22233    333333 4


Q ss_pred             CeE--EEEeCCCc-ccccCC-CCcceEEEc
Q 044563          246 FHI--TGLISNQM-DALIGQ-SLGKRVFKL  271 (290)
Q Consensus       246 YrI--v~~iGDq~-sDl~G~-~~g~r~fkL  271 (290)
                      ...  +..|||+. +|+.+. ..|-.++-+
T Consensus       168 ~~~~~~v~igD~~~~di~~A~~~G~~~i~~  197 (224)
T TIGR02254       168 FSKEEVLMIGDSLTADIKGGQNAGLDTCWM  197 (224)
T ss_pred             CCchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence            443  67999997 799865 345444443

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=96.88  E-value=0.0076  Score=53.95  Aligned_cols=89  Identities=9%  Similarity=0.065  Sum_probs=60.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC--CcceeecCcc-cCc--chHHhhHHHHHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW--SSLIMRLDNE-MQM--DSREYLSRRRTILQ  242 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~--d~LiLR~~~~-~~~--~~~~yKs~~R~~i~  242 (290)
                      +.+..|++.+|++.+++.| +++++||-.   +..+...++..|+..+  ..|...+.+. .+.  ....-|...-+++.
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~---~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~  141 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDTF---YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK  141 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCCh---HHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH
Confidence            3478999999999999985 999999954   4577778889998632  1233322010 110  11234666666777


Q ss_pred             hcCCeEEEEeCCCcccccC
Q 044563          243 KEGFHITGLISNQMDALIG  261 (290)
Q Consensus       243 ~~GYrIv~~iGDq~sDl~G  261 (290)
                      +.|.+++ .+||-.+|+.-
T Consensus       142 ~~~~~~v-~vGDs~nDl~m  159 (203)
T TIGR02137       142 SLYYRVI-AAGDSYNDTTM  159 (203)
T ss_pred             hhCCCEE-EEeCCHHHHHH
Confidence            7777655 77999999964

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=96.86  E-value=0.0027  Score=60.46  Aligned_cols=58  Identities=17%  Similarity=0.126  Sum_probs=47.3

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhC----CCeEEEecCCCccchHHHHHHH
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVR----GWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~----Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      +++||+||||-..                        .+++|++.++++.|+++    |..++|+||.....+..-.+-|
T Consensus         2 ~~ifD~DGvL~~g------------------------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l   57 (321)
T TIGR01456         2 GFAFDIDGVLFRG------------------------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI   57 (321)
T ss_pred             EEEEeCcCceECC------------------------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence            7999999988653                        14599999999999999    9999999998766555555556


Q ss_pred             -HhCCCC
Q 044563          208 -ISAGYR  213 (290)
Q Consensus       208 -~~~Gy~  213 (290)
                       ++.|+.
T Consensus        58 ~~~lG~~   64 (321)
T TIGR01456        58 SSLLGVD   64 (321)
T ss_pred             HHHcCCC
Confidence             888985

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.86  E-value=0.002  Score=58.67  Aligned_cols=58  Identities=19%  Similarity=0.179  Sum_probs=41.4

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      ...+++|+||||.+...                       .--+.+.+.+++++++|++|++.|||+-..-....+.|.-
T Consensus         3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~   59 (264)
T COG0561           3 IKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL   59 (264)
T ss_pred             eeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence            35899999998887521                       1245688888899999999999999986333333344433


Q ss_pred             C
Q 044563          210 A  210 (290)
Q Consensus       210 ~  210 (290)
                      .
T Consensus        60 ~   60 (264)
T COG0561          60 D   60 (264)
T ss_pred             C
Confidence            3

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=96.84  E-value=0.0038  Score=56.57  Aligned_cols=56  Identities=18%  Similarity=0.297  Sum_probs=40.8

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .+++|+||||.+...                       .--+.+.+.+++++++|+++++.|||+-.   ...+-+...|
T Consensus         1 li~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~---~~~~~~~~~~   54 (256)
T TIGR00099         1 LIFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYK---EVKNILKELG   54 (256)
T ss_pred             CEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcC
Confidence            378999998886410                       11246788999999999999999999842   3344556667


Q ss_pred             CC
Q 044563          212 YR  213 (290)
Q Consensus       212 y~  213 (290)
                      +.
T Consensus        55 ~~   56 (256)
T TIGR00099        55 LD   56 (256)
T ss_pred             CC
Confidence            65

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.83  E-value=0.003  Score=55.83  Aligned_cols=46  Identities=20%  Similarity=0.321  Sum_probs=35.9

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~  199 (290)
                      ..|++|+||||.+...                       .--|.+.+.+++++++|++|++.|||+-..
T Consensus         2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~   47 (215)
T TIGR01487         2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPF   47 (215)
T ss_pred             cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchh
Confidence            4799999998886310                       123467888999999999999999998543

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=96.81  E-value=0.004  Score=54.81  Aligned_cols=137  Identities=11%  Similarity=-0.041  Sum_probs=77.0

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHH----HHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHH
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIE----CIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTE  205 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~----Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~  205 (290)
                      |..||||+|.||-+...+.-+. +.+.+..=.+    =......++.|++.++++.|+++|+++.++|+...  +.....
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~--~~~~~~   78 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLG-GPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDV--PEWAYE   78 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccC-CCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCC--hHHHHH
Confidence            4589999999998865443322 1122111000    00123567889999999999999999999998722  234455


Q ss_pred             HHHhCCCC---------CC-CcceeecCcccCcchHHhhHHHHHHHHhc---C--CeEEEEeCCCcccccCC-CCcceEE
Q 044563          206 LLISAGYR---------GW-SSLIMRLDNEMQMDSREYLSRRRTILQKE---G--FHITGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       206 NL~~~Gy~---------~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~---G--YrIv~~iGDq~sDl~G~-~~g~r~f  269 (290)
                      .|...|+.         .+ +.++-- ... .+ ....... -+.+.+.   |  ..=..+|||...|+.+. ..|-+++
T Consensus        79 ~L~~~~l~~~~~~~~~~~~Fd~iv~~-~~~-~~-~kp~~~i-~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i  154 (174)
T TIGR01685        79 ILGTFEITYAGKTVPMHSLFDDRIEI-YKP-NK-AKQLEMI-LQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC  154 (174)
T ss_pred             HHHhCCcCCCCCcccHHHhceeeeec-cCC-ch-HHHHHHH-HHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence            66777753         32 222221 111 11 0111111 1122211   1  33467999999999764 3466666


Q ss_pred             EccC
Q 044563          270 KLPN  273 (290)
Q Consensus       270 kLPN  273 (290)
                      -+|.
T Consensus       155 ~v~~  158 (174)
T TIGR01685       155 YCPS  158 (174)
T ss_pred             EcCC
Confidence            6654

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=96.79  E-value=0.0024  Score=56.27  Aligned_cols=55  Identities=22%  Similarity=0.257  Sum_probs=38.1

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      |++|+||||.+...                       .--|.+.+.+++++++|+.+++.|||+-.....   -++..|.
T Consensus         1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~---~~~~l~~   54 (225)
T TIGR01482         1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARA---LAKLIGT   54 (225)
T ss_pred             CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHH---HHHHhCC
Confidence            58999998887421                       112446677889999999999999998654332   3345564


Q ss_pred             C
Q 044563          213 R  213 (290)
Q Consensus       213 ~  213 (290)
                      +
T Consensus        55 ~   55 (225)
T TIGR01482        55 P   55 (225)
T ss_pred             C
Confidence            4

catalyze the same reaction as SPP.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.77  E-value=0.0022  Score=56.16  Aligned_cols=116  Identities=10%  Similarity=0.115  Sum_probs=64.9

Q ss_pred             CcEEEEecccccccCh-hhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          130 LDVVLMDIDDIFASSS-KYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~-y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      -.++||||||+|.... +|...+  . -...|+.  .++         .-++.|+++|+++.++|++++   ..+.+-|+
T Consensus         7 i~~~v~d~dGv~tdg~~~~~~~g--~-~~~~~~~--~D~---------~~~~~L~~~Gi~laIiT~k~~---~~~~~~l~   69 (169)
T TIGR02726         7 IKLVILDVDGVMTDGRIVINDEG--I-ESRNFDI--KDG---------MGVIVLQLCGIDVAIITSKKS---GAVRHRAE   69 (169)
T ss_pred             CeEEEEeCceeeECCeEEEcCCC--c-EEEEEec--chH---------HHHHHHHHCCCEEEEEECCCc---HHHHHHHH
Confidence            4599999999776653 222211  1 0111211  011         124568889999999999864   46777888


Q ss_pred             hCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC--eEEEEeCCCcccccCCCCcceEEEccC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF--HITGLISNQMDALIGQSLGKRVFKLPN  273 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY--rIv~~iGDq~sDl~G~~~g~r~fkLPN  273 (290)
                      ..|+..|   +.. .  .++ ..    ..+..++..|.  .=++.|||...|+.......-.|-.+|
T Consensus        70 ~lgi~~~---f~~-~--kpk-p~----~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~n  125 (169)
T TIGR02726        70 ELKIKRF---HEG-I--KKK-TE----PYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGD  125 (169)
T ss_pred             HCCCcEE---Eec-C--CCC-HH----HHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcC
Confidence            8898633   211 1  111 11    12222333332  237899999999987533223444444

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=96.76  E-value=0.0032  Score=57.35  Aligned_cols=56  Identities=11%  Similarity=0.132  Sum_probs=41.2

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.|++|+||||.+...                       .--+.+.+.+++++++|+.|++.|||+-..   ...-++..
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~~~~l   57 (270)
T PRK10513          4 KLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAG---VHRYLKEL   57 (270)
T ss_pred             EEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHH---HHHHHHHh
Confidence            5899999998887421                       112457888999999999999999998643   33445555


Q ss_pred             CC
Q 044563          211 GY  212 (290)
Q Consensus       211 Gy  212 (290)
                      |+
T Consensus        58 ~~   59 (270)
T PRK10513         58 HM   59 (270)
T ss_pred             CC
Confidence            65

>PTZ00174 phosphomannomutase; Provisional

Probab=96.76  E-value=0.0027  Score=57.89  Aligned_cols=46  Identities=13%  Similarity=0.268  Sum_probs=35.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ...|++|+||||.+...       ..                -|.+.+.+++++++|+++++.|||+-.
T Consensus         5 ~klia~DlDGTLL~~~~-------~i----------------s~~~~~ai~~l~~~Gi~~viaTGR~~~   50 (247)
T PTZ00174          5 KTILLFDVDGTLTKPRN-------PI----------------TQEMKDTLAKLKSKGFKIGVVGGSDYP   50 (247)
T ss_pred             CeEEEEECcCCCcCCCC-------CC----------------CHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            35899999998887521       12                245678889999999999999999754

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.73  E-value=0.0035  Score=57.74  Aligned_cols=57  Identities=21%  Similarity=0.230  Sum_probs=41.1

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      +..|++||||||.+...        .               .-+.+.+.+++|+++|++|++.|||+-..-   ..-++.
T Consensus         7 ~~lI~~DlDGTLL~~~~--------~---------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~~~~   60 (271)
T PRK03669          7 PLLIFTDLDGTLLDSHT--------Y---------------DWQPAAPWLTRLREAQVPVILCSSKTAAEM---LPLQQT   60 (271)
T ss_pred             CeEEEEeCccCCcCCCC--------c---------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH
Confidence            45899999998887411        1               124577888999999999999999986433   334455


Q ss_pred             CCC
Q 044563          210 AGY  212 (290)
Q Consensus       210 ~Gy  212 (290)
                      .|+
T Consensus        61 l~~   63 (271)
T PRK03669         61 LGL   63 (271)
T ss_pred             hCC
Confidence            565

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=96.72  E-value=0.0026  Score=55.51  Aligned_cols=102  Identities=13%  Similarity=0.161  Sum_probs=62.9

Q ss_pred             cEEEEecccccccChh-hhhhc--cCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          131 DVVLMDIDDIFASSSK-YSNLL--IDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y-~~~~~--~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      .-+||||||||.+-.. |..++  +..||.       .+|-         -.+.+.+.|++|-+||||+..   .-++-.
T Consensus         9 kLli~DVDGvLTDG~ly~~~~Gee~KaFnv-------~DG~---------Gik~l~~~Gi~vAIITGr~s~---ive~Ra   69 (170)
T COG1778           9 KLLILDVDGVLTDGKLYYDENGEEIKAFNV-------RDGH---------GIKLLLKSGIKVAIITGRDSP---IVEKRA   69 (170)
T ss_pred             eEEEEeccceeecCeEEEcCCCceeeeeec-------cCcH---------HHHHHHHcCCeEEEEeCCCCH---HHHHHH
Confidence            3689999999988753 33332  112332       1111         245688899999999999853   455666


Q ss_pred             HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          208 ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      ++.|..   ++++ +..++   -..|+ +-++++ .-++.=+++|||-+.|+.
T Consensus        70 ~~LGI~---~~~q-G~~dK---~~a~~-~L~~~~-~l~~e~~ayiGDD~~Dlp  113 (170)
T COG1778          70 KDLGIK---HLYQ-GISDK---LAAFE-ELLKKL-NLDPEEVAYVGDDLVDLP  113 (170)
T ss_pred             HHcCCc---eeee-chHhH---HHHHH-HHHHHh-CCCHHHhhhhcCccccHH
Confidence            778875   3443 22221   11232 233333 356777999999999996

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=96.72  E-value=0.0027  Score=54.02  Aligned_cols=73  Identities=7%  Similarity=-0.067  Sum_probs=45.6

Q ss_pred             HHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcc
Q 044563          178 LFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMD  257 (290)
Q Consensus       178 l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~s  257 (290)
                      .+++|+++|++|+++||++.   ..+.+.|+..|+..+   + ...  ..+ ...++ ...+++ ...-.-+..+||...
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~---~~~~~~l~~~gi~~~---~-~~~--~~k-~~~~~-~~~~~~-~~~~~~~~~vGDs~~  103 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKA---KLVEDRCKTLGITHL---Y-QGQ--SNK-LIAFS-DILEKL-ALAPENVAYIGDDLI  103 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCC---HHHHHHHHHcCCCEE---E-ecc--cch-HHHHH-HHHHHc-CCCHHHEEEECCCHH
Confidence            68899999999999999875   455678889998632   2 111  111 11111 111111 112345789999999


Q ss_pred             cccCC
Q 044563          258 ALIGQ  262 (290)
Q Consensus       258 Dl~G~  262 (290)
                      |+...
T Consensus       104 D~~~~  108 (154)
T TIGR01670       104 DWPVM  108 (154)
T ss_pred             HHHHH
Confidence            98754

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.68  E-value=0.01  Score=60.65  Aligned_cols=114  Identities=8%  Similarity=0.123  Sum_probs=68.3

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc---------ch
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG---------QR  200 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~---------~r  200 (290)
                      .+++.||.||||-....-. . | ..++.+|   .     ...|++.+.++.|++.|++|+++||-..-         ..
T Consensus       168 ~Kia~fD~DGTLi~t~sg~-~-~-~~~~~d~---~-----~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~  236 (526)
T TIGR01663       168 EKIAGFDLDGTIIKTKSGK-V-F-PKGPDDW---Q-----IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFK  236 (526)
T ss_pred             CcEEEEECCCCccccCCCc-c-C-CCCHHHe---e-----ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHH
Confidence            4699999999776542100 0 0 1344444   2     14688999999999999999999997662         12


Q ss_pred             HHHHHHHHhCCCCCCCcceeecCc-ccCcchHHhhHHHHHHHHhc---CCeE----EEEeCCCccccc
Q 044563          201 NATTELLISAGYRGWSSLIMRLDN-EMQMDSREYLSRRRTILQKE---GFHI----TGLISNQMDALI  260 (290)
Q Consensus       201 ~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~~~yKs~~R~~i~~~---GYrI----v~~iGDq~sDl~  260 (290)
                      ..+.+-|+..|.+ .+ .+.-... ..++..    .+.-..+.++   |..|    ..+|||..+|..
T Consensus       237 ~ki~~iL~~lgip-fd-viia~~~~~~RKP~----pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~  298 (526)
T TIGR01663       237 AKIEAIVAKLGVP-FQ-VFIAIGAGFYRKPL----TGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPA  298 (526)
T ss_pred             HHHHHHHHHcCCc-eE-EEEeCCCCCCCCCC----HHHHHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence            3466778888986 54 2322221 223321    1222222221   1223    469999998873

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=96.67  E-value=0.0057  Score=53.77  Aligned_cols=101  Identities=13%  Similarity=0.198  Sum_probs=65.9

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.+++++|+++|+++.++||.+.   .....-|+..|+..+ +.++-..+....++ .-.|+.    .+++-|.
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~----~~~~~~~  165 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLP---VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYA----ALKRLGV  165 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHH----HHHHcCC
Confidence            47899999999999999999999999863   334456778887643 44444433222232 223332    3333343


Q ss_pred             e--EEEEeCCCc-ccccCC-CCcceEEEccCCcc
Q 044563          247 H--ITGLISNQM-DALIGQ-SLGKRVFKLPNPLY  276 (290)
Q Consensus       247 r--Iv~~iGDq~-sDl~G~-~~g~r~fkLPNPmY  276 (290)
                      .  =+..|||.+ .|+.+. ..|-+++-++.+.+
T Consensus       166 ~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~  199 (221)
T TIGR02253       166 KPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKS  199 (221)
T ss_pred             ChhhEEEECCChHHHHHHHHHCCCEEEEECCCCC
Confidence            2  256999999 899875 35777777766543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01684 viral_ppase viral phosphatase

Probab=96.64  E-value=0.0084  Score=57.19  Aligned_cols=69  Identities=16%  Similarity=0.259  Sum_probs=50.8

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      +.+||||+||||-+....                    .-..-|++.+++++|+++|+++.++|++..   ....+-|.+
T Consensus       126 ~kvIvFDLDgTLi~~~~~--------------------v~irdPgV~EaL~~LkekGikLaIaTS~~R---e~v~~~L~~  182 (301)
T TIGR01684       126 PHVVVFDLDSTLITDEEP--------------------VRIRDPRIYDSLTELKKRGCILVLWSYGDR---DHVVESMRK  182 (301)
T ss_pred             ceEEEEecCCCCcCCCCc--------------------cccCCHHHHHHHHHHHHCCCEEEEEECCCH---HHHHHHHHH
Confidence            569999999988875210                    002247899999999999999999998753   344578899


Q ss_pred             CCCCCCCcceee
Q 044563          210 AGYRGWSSLIMR  221 (290)
Q Consensus       210 ~Gy~~~d~LiLR  221 (290)
                      .|+..+=..+.-
T Consensus       183 lGLd~YFdvIIs  194 (301)
T TIGR01684       183 VKLDRYFDIIIS  194 (301)
T ss_pred             cCCCcccCEEEE
Confidence            998765344444

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=96.56  E-value=0.0088  Score=53.06  Aligned_cols=101  Identities=11%  Similarity=0.078  Sum_probs=67.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.|++.++++.++++|+++.++||..   +..+...|+..|+.++-..++-.+. ..+++..   ...+..++..|.
T Consensus        90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~---~~~~~~~~~~~~  163 (222)
T PRK10826         90 TRPLLPGVREALALCKAQGLKIGLASASP---LHMLEAVLTMFDLRDYFDALASAEKLPYSKPHP---EVYLNCAAKLGV  163 (222)
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHhCcchhcccEEEEcccCCCCCCCH---HHHHHHHHHcCC
Confidence            35788999999999999999999999954   4566677888887654333333222 1222211   122333444443


Q ss_pred             --eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 --HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 --rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                        .=+.+|||..+|+... ..|-+++-+|+|
T Consensus       164 ~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~  194 (222)
T PRK10826        164 DPLTCVALEDSFNGMIAAKAARMRSIVVPAP  194 (222)
T ss_pred             CHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence              2266999999999865 467788888876

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=96.56  E-value=0.014  Score=53.39  Aligned_cols=99  Identities=13%  Similarity=0.170  Sum_probs=77.2

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..+.+||-|||-+.                        ..|+|++++-++.|+..+++|=|+||-+.+.+.--.+-|.+.
T Consensus         8 ~gvLlDlSGtLh~e------------------------~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rl   63 (262)
T KOG3040|consen    8 KGVLLDLSGTLHIE------------------------DAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRL   63 (262)
T ss_pred             ceEEEeccceEecc------------------------cccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHh
Confidence            47889998877653                        128999999999999999999999999988888889999999


Q ss_pred             CCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCC-cccccCCCC
Q 044563          211 GYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQ-MDALIGQSL  264 (290)
Q Consensus       211 Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq-~sDl~G~~~  264 (290)
                      ||.--+.=+.-           --...|+-++++++|--..+.|. .+||.|...
T Consensus        64 gf~v~eeei~t-----------sl~aa~~~~~~~~lrP~l~v~d~a~~dF~gidT  107 (262)
T KOG3040|consen   64 GFDVSEEEIFT-----------SLPAARQYLEENQLRPYLIVDDDALEDFDGIDT  107 (262)
T ss_pred             CCCccHHHhcC-----------ccHHHHHHHHhcCCCceEEEcccchhhCCCccC
Confidence            99622111111           12357888889999998888765 789999753

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.55  E-value=0.0043  Score=54.15  Aligned_cols=45  Identities=18%  Similarity=0.320  Sum_probs=35.7

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ  199 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~  199 (290)
                      +++|+||||.+...                      .+.-+.+.+.+++|+++|+.++++|||+...
T Consensus         2 i~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~   46 (204)
T TIGR01484         2 LFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAE   46 (204)
T ss_pred             EEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHH
Confidence            78999998886310                      1234678899999999999999999998643

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=96.52  E-value=0.013  Score=64.39  Aligned_cols=99  Identities=16%  Similarity=0.197  Sum_probs=62.9

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC-C-CCcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR-G-WSSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~-~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++||+++++++|+++|+++.++||..   +......|++.|+. . .+..+-..+....|+ .-.|....+ ++.-..-
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~---~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~-~lgv~p~  236 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSAD---RIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAK-ILGVPTS  236 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCc---HHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHH-HcCcCcc
Confidence            369999999999999999999999975   34455678888874 3 344433222222222 223433222 2322223


Q ss_pred             eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      + ..+|||...|+... ..|-+++-+..
T Consensus       237 e-~v~IgDs~~Di~AA~~aGm~~I~v~~  263 (1057)
T PLN02919        237 E-CVVIEDALAGVQAARAAGMRCIAVTT  263 (1057)
T ss_pred             c-EEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            3 45699999999765 45777777755

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=96.52  E-value=0.0096  Score=53.85  Aligned_cols=92  Identities=13%  Similarity=0.156  Sum_probs=55.6

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCc-chHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQM-DSREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~-~~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|+++ +++.++||-+..        +...|+..+=..++.... ...| +...|..    .+...|.
T Consensus       112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~----a~~~~~~  178 (238)
T PRK10748        112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDYFEFVLRAGPHGRSKPFSDMYHL----AAEKLNV  178 (238)
T ss_pred             CCCCccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHhhceeEecccCCcCCCcHHHHHH----HHHHcCC
Confidence            45678999999999875 999999996543        456776544223333322 1222 2222332    2223343


Q ss_pred             eE--EEEeCCCc-ccccCC-CCcceEEEccC
Q 044563          247 HI--TGLISNQM-DALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 rI--v~~iGDq~-sDl~G~-~~g~r~fkLPN  273 (290)
                      ..  +..|||++ .|+.|. ..|-+++-+.+
T Consensus       179 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~  209 (238)
T PRK10748        179 PIGEILHVGDDLTTDVAGAIRCGMQACWINP  209 (238)
T ss_pred             ChhHEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence            32  67999995 999875 45666665543

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=96.48  E-value=0.0076  Score=54.62  Aligned_cols=100  Identities=9%  Similarity=-0.032  Sum_probs=64.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC--CcceeecCcccCcchHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW--SSLIMRLDNEMQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~--d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G  245 (290)
                      ...+.||+.++++.|+++|+++.++||.+.   ..+...|+..|..++  +.++-..+...+|+..   ......+++.|
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~---~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p---~~~~~a~~~l~  170 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTR---EMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAP---WMALKNAIELG  170 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHHHHhcCCCCceEEccccCCCCCCCH---HHHHHHHHHcC
Confidence            457899999999999999999999999874   344555666665544  3333332222222221   12233344444


Q ss_pred             C---eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 F---HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 Y---rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      -   .=..+|||.+.|+.+. ..|-+++-++.
T Consensus       171 ~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~  202 (253)
T TIGR01422       171 VYDVAACVKVGDTVPDIEEGRNAGMWTVGLIL  202 (253)
T ss_pred             CCCchheEEECCcHHHHHHHHHCCCeEEEEec
Confidence            3   1256899999999876 45777777764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=96.29  E-value=0.017  Score=54.13  Aligned_cols=101  Identities=13%  Similarity=0.064  Sum_probs=58.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcchH-HhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDSR-EYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~~-~yKs~~R~~i~~~GY  246 (290)
                      .+++||+.+++++|+++|+++.++||.+......-.+.+...++..+-..+ -.++ ...|+.. .|.    ..+...|.
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~----~a~~~~~~  217 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYN----LAAETLGV  217 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHH----HHHHHhCc
Confidence            478999999999999999999999997543333222222111232221222 2221 1223222 222    22233344


Q ss_pred             eE--EEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 HI--TGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 rI--v~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      ..  +.+|||.+.|+.+. ..|-+++-++++
T Consensus       218 ~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g  248 (286)
T PLN02779        218 DPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS  248 (286)
T ss_pred             ChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence            33  55799999999875 356677777654

>PRK08238 hypothetical protein; Validated

Probab=96.29  E-value=0.025  Score=57.21  Aligned_cols=84  Identities=12%  Similarity=0.140  Sum_probs=51.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHH-HHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRR-TILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R-~~i~~~GY  246 (290)
                      ..|..|++++++++++++|.++.++|+.++.   ....-++..|+  .+..+ -.++...+.. +-|..+. +.+.++|+
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~---~a~~i~~~lGl--Fd~Vi-gsd~~~~~kg-~~K~~~l~~~l~~~~~  142 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDER---LAQAVAAHLGL--FDGVF-ASDGTTNLKG-AAKAAALVEAFGERGF  142 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHcCC--CCEEE-eCCCccccCC-chHHHHHHHHhCccCe
Confidence            4456799999999999999999999998764   44455666675  23333 2222111110 1133322 22223333


Q ss_pred             eEEEEeCCCcccccC
Q 044563          247 HITGLISNQMDALIG  261 (290)
Q Consensus       247 rIv~~iGDq~sDl~G  261 (290)
                         ..+||..+|+..
T Consensus       143 ---~yvGDS~~Dlp~  154 (479)
T PRK08238        143 ---DYAGNSAADLPV  154 (479)
T ss_pred             ---eEecCCHHHHHH
Confidence               357999999975

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=96.28  E-value=0.0072  Score=51.41  Aligned_cols=85  Identities=13%  Similarity=0.132  Sum_probs=53.6

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.||+.++++.|+++|+++.++|++     ......|+..|+..+=..++-... ...++ .-.|.    ..+++.|
T Consensus        86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~----~~~~~~~  156 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFL----LAAELLG  156 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHH----HHHHHcC
Confidence            3678999999999999999999999997     224567778887543223332221 11221 11222    2233333


Q ss_pred             C---eEEEEeCCCcccccCC
Q 044563          246 F---HITGLISNQMDALIGQ  262 (290)
Q Consensus       246 Y---rIv~~iGDq~sDl~G~  262 (290)
                      .   + +..|||...|+.+.
T Consensus       157 ~~~~~-~v~IgD~~~di~aA  175 (185)
T TIGR02009       157 VSPNE-CVVFEDALAGVQAA  175 (185)
T ss_pred             CCHHH-eEEEeCcHhhHHHH
Confidence            2   3 44799999999865

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=96.27  E-value=0.024  Score=48.53  Aligned_cols=93  Identities=12%  Similarity=0.130  Sum_probs=54.9

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchH-HhhHHHHHHHHhcCCe
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSR-EYLSRRRTILQKEGFH  247 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~-~yKs~~R~~i~~~GYr  247 (290)
                      ++.| .++++.+|++. +++.++||-+   +......|+..|+..+ +.++-..+....++.. .|...    +++-|..
T Consensus        88 ~~~~-~~e~L~~L~~~-~~l~I~T~~~---~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~----~~~~~~~  158 (188)
T PRK10725         88 EPLP-LIEVVKAWHGR-RPMAVGTGSE---SAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRC----AQLMGVQ  158 (188)
T ss_pred             CCcc-HHHHHHHHHhC-CCEEEEcCCc---hHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHH----HHHcCCC
Confidence            4555 47899998865 8999999954   4455677888888654 4333332222233222 23322    2223333


Q ss_pred             E--EEEeCCCcccccCCC-CcceEEEc
Q 044563          248 I--TGLISNQMDALIGQS-LGKRVFKL  271 (290)
Q Consensus       248 I--v~~iGDq~sDl~G~~-~g~r~fkL  271 (290)
                      .  +..|||...|+.+.. .|-+++.+
T Consensus       159 ~~~~l~igDs~~di~aA~~aG~~~i~~  185 (188)
T PRK10725        159 PTQCVVFEDADFGIQAARAAGMDAVDV  185 (188)
T ss_pred             HHHeEEEeccHhhHHHHHHCCCEEEee
Confidence            2  446899999998753 45555543

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=96.26  E-value=0.018  Score=54.99  Aligned_cols=70  Identities=19%  Similarity=0.318  Sum_probs=50.6

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      -+..||||+||||-+...-                    --.--|++.+++.+|+++|+++.++|+.+   |....+-|.
T Consensus       127 ~~~~i~~D~D~TL~~~~~~--------------------v~irdp~V~EtL~eLkekGikLaIvTNg~---Re~v~~~Le  183 (303)
T PHA03398        127 IPHVIVFDLDSTLITDEEP--------------------VRIRDPFVYDSLDELKERGCVLVLWSYGN---REHVVHSLK  183 (303)
T ss_pred             eccEEEEecCCCccCCCCc--------------------cccCChhHHHHHHHHHHCCCEEEEEcCCC---hHHHHHHHH
Confidence            3569999999988875210                    00114789999999999999999999764   334477888


Q ss_pred             hCCCCCCCcceee
Q 044563          209 SAGYRGWSSLIMR  221 (290)
Q Consensus       209 ~~Gy~~~d~LiLR  221 (290)
                      +.|...+-..+.-
T Consensus       184 ~lgL~~yFDvII~  196 (303)
T PHA03398        184 ETKLEGYFDIIIC  196 (303)
T ss_pred             HcCCCccccEEEE
Confidence            8998765444444

>PLN02887 hydrolase family protein

Probab=96.13  E-value=0.018  Score=59.51  Aligned_cols=45  Identities=18%  Similarity=0.211  Sum_probs=35.7

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ..|++||||||.+...                       .--+.+++.+++++++|++|++.|||+-.
T Consensus       309 KLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~  353 (580)
T PLN02887        309 SYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARP  353 (580)
T ss_pred             cEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHH
Confidence            4899999998887521                       11245778899999999999999999854

>PLN03017 trehalose-phosphatase

Probab=96.13  E-value=0.0096  Score=58.30  Aligned_cols=63  Identities=13%  Similarity=0.178  Sum_probs=43.0

Q ss_pred             HHHHHhhhCCCC-CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecC
Q 044563          116 VESYFNTLTPSY-NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSR  194 (290)
Q Consensus       116 A~~y~~~~~~~~-~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSg  194 (290)
                      |...++++.... .++-++++|+||||.-.-         -+|         ..+..-+.+.+.++.|. +|+.|+++||
T Consensus        96 al~~~~~~~~~~~~k~~llflD~DGTL~Piv---------~~p---------~~a~i~~~~~~aL~~La-~~~~vaIvSG  156 (366)
T PLN03017         96 ALEMFEQIMEASRGKQIVMFLDYDGTLSPIV---------DDP---------DKAFMSSKMRRTVKKLA-KCFPTAIVTG  156 (366)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEecCCcCcCCc---------CCc---------ccccCCHHHHHHHHHHh-cCCcEEEEeC
Confidence            555566555432 344588899999998320         001         12245578899999999 7899999999


Q ss_pred             CCc
Q 044563          195 KHE  197 (290)
Q Consensus       195 R~e  197 (290)
                      |+-
T Consensus       157 R~~  159 (366)
T PLN03017        157 RCI  159 (366)
T ss_pred             CCH
Confidence            974

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=96.12  E-value=0.02  Score=50.04  Aligned_cols=96  Identities=11%  Similarity=0.039  Sum_probs=60.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.+++++|+++|++++++||..   +..+..-|+..|+..+ +.++--......++ .-.|+    +.+++.|
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~----~~~~~~~  145 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKS---GPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVR----EALRLLD  145 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHH----HHHHHcC
Confidence            46789999999999999999999999975   3445667888888644 33332211111221 12222    3333334


Q ss_pred             CeE--EEEeCCCcccccCC-CCcceEEE
Q 044563          246 FHI--TGLISNQMDALIGQ-SLGKRVFK  270 (290)
Q Consensus       246 YrI--v~~iGDq~sDl~G~-~~g~r~fk  270 (290)
                      ...  +..|||...|+.+. ..|-+++-
T Consensus       146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~  173 (205)
T TIGR01454       146 VPPEDAVMVGDAVTDLASARAAGTATVA  173 (205)
T ss_pred             CChhheEEEcCCHHHHHHHHHcCCeEEE
Confidence            322  67999999999764 34554443

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.09  E-value=0.012  Score=56.09  Aligned_cols=57  Identities=18%  Similarity=0.188  Sum_probs=39.8

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..|++|+||||.+...        +.   |            +.+.+.+++|+++|+.|++.|||+...-....   ++.
T Consensus         2 KLIftDLDGTLLd~~~--------~~---~------------~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~---~~L   55 (302)
T PRK12702          2 RLVLSSLDGSLLDLEF--------NS---Y------------GAARQALAALERRSIPLVLYSLRTRAQLEHLC---RQL   55 (302)
T ss_pred             cEEEEeCCCCCcCCCC--------cC---C------------HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHh
Confidence            5789999998777421        11   1            23677889999999999999999865433333   344


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |..
T Consensus        56 gl~   58 (302)
T PRK12702         56 RLE   58 (302)
T ss_pred             CCC
Confidence            553

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=96.03  E-value=0.017  Score=59.93  Aligned_cols=80  Identities=26%  Similarity=0.378  Sum_probs=53.0

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC-
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA-  210 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~-  210 (290)
                      .||-|||||+--+--     .|.+-|.       .|++=.--|+.+||.++.+.|++++|+|.|.-.|...|..-|+.. 
T Consensus       532 IVISDIDGTITKSDv-----LGh~lp~-------iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~  599 (738)
T KOG2116|consen  532 IVISDIDGTITKSDV-----LGHVLPM-------IGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVE  599 (738)
T ss_pred             EEEecCCCceEhhhh-----hhhhhhh-------hcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHh
Confidence            577799997665421     2332221       122223457889999999999999999999999999997666654 


Q ss_pred             --CCCCCC-cceeecC
Q 044563          211 --GYRGWS-SLIMRLD  223 (290)
Q Consensus       211 --Gy~~~d-~LiLR~~  223 (290)
                        |+.--+ -++|.++
T Consensus       600 QdG~~LPdGPViLSPd  615 (738)
T KOG2116|consen  600 QDGKKLPDGPVILSPD  615 (738)
T ss_pred             hcCccCCCCCEEeCCC
Confidence              653112 3455443

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=95.98  E-value=0.041  Score=52.88  Aligned_cols=90  Identities=18%  Similarity=0.065  Sum_probs=54.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-C-cceeec-------CcccCcchHHhhHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-S-SLIMRL-------DNEMQMDSREYLSRRR  238 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d-~LiLR~-------~~~~~~~~~~yKs~~R  238 (290)
                      ..+..|++.++++.+++.|+++.++||-....   +..-+...|+... . .|-...       .++. . ....|.+.-
T Consensus       179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~---~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~i-v-~~k~K~~~L  253 (322)
T PRK11133        179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYF---ADYLRDKLRLDAAVANELEIMDGKLTGNVLGDI-V-DAQYKADTL  253 (322)
T ss_pred             hCCCChhHHHHHHHHHHcCCEEEEEECCcchh---HHHHHHHcCCCeEEEeEEEEECCEEEeEecCcc-C-CcccHHHHH
Confidence            56789999999999999999999999976432   3344556777421 1 111110       0100 0 012344443


Q ss_pred             HHHH-hcC--CeEEEEeCCCcccccCC
Q 044563          239 TILQ-KEG--FHITGLISNQMDALIGQ  262 (290)
Q Consensus       239 ~~i~-~~G--YrIv~~iGDq~sDl~G~  262 (290)
                      +++. +.|  ..-+..|||..+|+...
T Consensus       254 ~~la~~lgi~~~qtIaVGDg~NDl~m~  280 (322)
T PRK11133        254 TRLAQEYEIPLAQTVAIGDGANDLPMI  280 (322)
T ss_pred             HHHHHHcCCChhhEEEEECCHHHHHHH
Confidence            3443 334  23467889999999864

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=95.97  E-value=0.023  Score=49.52  Aligned_cols=88  Identities=11%  Similarity=0.194  Sum_probs=53.2

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcchHHhhHHHHHHHHhcCCeE
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMDSREYLSRRRTILQKEGFHI  248 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~~~~yKs~~R~~i~~~GYrI  248 (290)
                      .+.+++.++++.|+++|+++.++||++   +..+...|+..|+..+-..++-.++ ...++...|+... +++.-..-+ 
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~-~~~~~~~~~-  180 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRP---RKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAA-KALGVEACH-  180 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCC---HHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHH-HHhCcCccc-
Confidence            344556899999999999999999986   4566777888897644333332222 1222222233222 222112223 


Q ss_pred             EEEeCCCcccccCC
Q 044563          249 TGLISNQMDALIGQ  262 (290)
Q Consensus       249 v~~iGDq~sDl~G~  262 (290)
                      +.+|||...|+.+.
T Consensus       181 ~i~vGD~~~Di~aA  194 (197)
T TIGR01548       181 AAMVGDTVDDIITG  194 (197)
T ss_pred             EEEEeCCHHHHHHH
Confidence            45899999998653

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=95.92  E-value=0.012  Score=49.61  Aligned_cols=126  Identities=9%  Similarity=0.013  Sum_probs=68.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCC-Ccc--chHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHH
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRV-NVR--GYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTEL  206 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~-~~~--~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~N  206 (290)
                      |..+|+|+||||-....-........ .+.  ...+=...-...+.||+.+|++.|+ +|+++.++|+-...   .+..-
T Consensus         2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~---~~~~i   77 (148)
T smart00577        2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRM---YADPV   77 (148)
T ss_pred             CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHH---HHHHH
Confidence            56899999997776532000000000 000  0000001123467899999999998 68999999997654   34445


Q ss_pred             HHhCCCCC-C-CcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCC
Q 044563          207 LISAGYRG-W-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQS  263 (290)
Q Consensus       207 L~~~Gy~~-~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~  263 (290)
                      |+..|... + +.++-+.+....++.  |....+ .+- ..-.=..+|||...|+....
T Consensus        78 l~~l~~~~~~f~~i~~~~d~~~~KP~--~~k~l~-~l~-~~p~~~i~i~Ds~~~~~aa~  132 (148)
T smart00577       78 LDLLDPKKYFGYRRLFRDECVFVKGK--YVKDLS-LLG-RDLSNVIIIDDSPDSWPFHP  132 (148)
T ss_pred             HHHhCcCCCEeeeEEECccccccCCe--EeecHH-HcC-CChhcEEEEECCHHHhhcCc
Confidence            66666632 2 445555443333332  221111 111 11223458999999998654

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=95.88  E-value=0.014  Score=54.24  Aligned_cols=51  Identities=14%  Similarity=0.040  Sum_probs=37.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHh-CCCeEEEecCCCcc
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQV-RGWPVILLSRKHEG  198 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~-~Gv~V~~iSgR~e~  198 (290)
                      +-++++|+||||.+.-         -+|         .....-|.+.+.++.|.+ .|+.|+++|||+-.
T Consensus        14 ~~li~~D~DGTLl~~~---------~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~   65 (266)
T PRK10187         14 NYAWFFDLDGTLAEIK---------PHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMV   65 (266)
T ss_pred             CEEEEEecCCCCCCCC---------CCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHH
Confidence            3589999999988741         011         012334788899999998 79999999999854

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=95.86  E-value=0.027  Score=51.37  Aligned_cols=99  Identities=13%  Similarity=0.082  Sum_probs=64.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.||+.++++.|+++|+++.++||.+   +..+...|+..|+..+ +..+-..+....|+..+.   ..+.++..|-
T Consensus       106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~---~~~a~~~~~~  179 (248)
T PLN02770        106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAP---RENAELMISLLGLSDFFQAVIIGSECEHAKPHPDP---YLKALEVLKV  179 (248)
T ss_pred             cCCcCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHH---HHHHHHHhCC
Confidence            46789999999999999999999999975   4566778888898654 343333322223322211   1222333332


Q ss_pred             e--EEEEeCCCcccccCC-CCcceEEEcc
Q 044563          247 H--ITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       247 r--Iv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                      +  =..+|||...|+... ..|-+++-+.
T Consensus       180 ~~~~~l~vgDs~~Di~aA~~aGi~~i~v~  208 (248)
T PLN02770        180 SKDHTFVFEDSVSGIKAGVAAGMPVVGLT  208 (248)
T ss_pred             ChhHEEEEcCCHHHHHHHHHCCCEEEEEe
Confidence            2  256799999999764 3466666554

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=95.75  E-value=0.021  Score=49.68  Aligned_cols=86  Identities=15%  Similarity=0.165  Sum_probs=55.1

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCeE
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFHI  248 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrI  248 (290)
                      .+.|++.+++++|+++|+++.++||-+.   . ....|+..|...+ +.++.......+|+..   .-.+..+++.|...
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~---~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~---~~~~~~~~~~~~~~  177 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDS---R-LRGLLEALGLLEYFDFVVTSYEVGAEKPDP---KIFQEALERAGISP  177 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCch---h-HHHHHHHCCcHHhcceEEeecccCCCCCCH---HHHHHHHHHcCCCh
Confidence            5789999999999999999999999653   2 3566888887543 4444332222222211   12233344444332


Q ss_pred             --EEEeCCCc-ccccCC
Q 044563          249 --TGLISNQM-DALIGQ  262 (290)
Q Consensus       249 --v~~iGDq~-sDl~G~  262 (290)
                        +..|||.+ .|+.+.
T Consensus       178 ~~~~~IgD~~~~Di~~A  194 (203)
T TIGR02252       178 EEALHIGDSLRNDYQGA  194 (203)
T ss_pred             hHEEEECCCchHHHHHH
Confidence              56899998 799764

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=95.75  E-value=0.022  Score=53.54  Aligned_cols=79  Identities=13%  Similarity=0.049  Sum_probs=53.3

Q ss_pred             CCCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCC-CeEEEecCCCccchHHHHH
Q 044563          127 YNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRG-WPVILLSRKHEGQRNATTE  205 (290)
Q Consensus       127 ~~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~G-v~V~~iSgR~e~~r~~T~~  205 (290)
                      ..++.+++||.||||.....        + |         ..+++.+.++++++.|.+.. ..|+++|||+...-+.=..
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~--------~-p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~   76 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVP--------H-P---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG   76 (266)
T ss_pred             cccceEEEEecccccccccc--------C-c---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence            35677999999999988632        1 2         25688999999999999994 4799999998543222111


Q ss_pred             HHHhCCCCCCCcceeecCc
Q 044563          206 LLISAGYRGWSSLIMRLDN  224 (290)
Q Consensus       206 NL~~~Gy~~~d~LiLR~~~  224 (290)
                       +...|+-+......|..+
T Consensus        77 -v~~i~l~aehGa~~r~~~   94 (266)
T COG1877          77 -VPGIGLIAEHGAEVRDPN   94 (266)
T ss_pred             -CCCccEEEecceEEecCC
Confidence             223344344456665444

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=95.55  E-value=0.036  Score=48.25  Aligned_cols=96  Identities=14%  Similarity=0.092  Sum_probs=61.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|+++|+++.++|+..   +......|+..|+..+-..+.-.++ ...++ ...|.    +.+++-|.
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~----~~~~~~~~  156 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKP---TPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLL----LAAERLGV  156 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHH----HHHHHcCC
Confidence            5789999999999999999999999975   4567778888887644223332222 11222 11222    23333332


Q ss_pred             --eEEEEeCCCcccccCC-CCcceEEEc
Q 044563          247 --HITGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       247 --rIv~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                        .=...|||..+|+... ..|-+++-+
T Consensus       157 ~~~~~~~igDs~~d~~aa~~aG~~~i~v  184 (213)
T TIGR01449       157 APQQMVYVGDSRVDIQAARAAGCPSVLL  184 (213)
T ss_pred             ChhHeEEeCCCHHHHHHHHHCCCeEEEE
Confidence              2266899999999754 345555544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=95.50  E-value=0.091  Score=47.45  Aligned_cols=89  Identities=13%  Similarity=-0.018  Sum_probs=59.4

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCc-ceeecCc-ccC-----cchHHhhHHHHHHH
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSS-LIMRLDN-EMQ-----MDSREYLSRRRTIL  241 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~-LiLR~~~-~~~-----~~~~~yKs~~R~~i  241 (290)
                      .+-.|++.++.+.++++|++|++|||=..   ..+..=.+..|+..+-. .+...++ ..+     .-..+.|..+-+++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~---~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~  152 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFT---FLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL  152 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChH---HHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence            67789999999999999999999999664   56666667778864422 2222221 111     11123466655444


Q ss_pred             H-hcCCe--EEEEeCCCccccc
Q 044563          242 Q-KEGFH--ITGLISNQMDALI  260 (290)
Q Consensus       242 ~-~~GYr--Iv~~iGDq~sDl~  260 (290)
                      . +.|++  =...+||-.+|++
T Consensus       153 ~~~~g~~~~~~~a~gDs~nDlp  174 (212)
T COG0560         153 AAELGIPLEETVAYGDSANDLP  174 (212)
T ss_pred             HHHcCCCHHHeEEEcCchhhHH
Confidence            4 45766  5678999999996

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=95.47  E-value=0.022  Score=48.27  Aligned_cols=81  Identities=16%  Similarity=0.108  Sum_probs=46.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-ccCc-chHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-EMQM-DSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-~~~~-~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++       ++.++||-+   +......|+..|+..+-..++-.+. ...| +.-.|...    ++..|
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~----~~~~~  153 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNAS---HWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELV----FDTVG  153 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCC---HHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHH----HHHHC
Confidence            4557888888888       367889854   3444557788887643222332221 1222 22233322    22233


Q ss_pred             C--eEEEEeCCCcccccCC
Q 044563          246 F--HITGLISNQMDALIGQ  262 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~  262 (290)
                      .  .=+.+|||...|+.|.
T Consensus       154 ~~p~~~l~vgD~~~Di~~A  172 (175)
T TIGR01493       154 LPPDRVLMVAAHQWDLIGA  172 (175)
T ss_pred             CCHHHeEeEecChhhHHHH
Confidence            3  2256899999999875

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PLN02423 phosphomannomutase

Probab=95.47  E-value=0.031  Score=51.20  Aligned_cols=44  Identities=16%  Similarity=0.173  Sum_probs=32.9

Q ss_pred             CCcEEE-EecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          129 GLDVVL-MDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       129 g~~AvV-fDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      ++.+++ |||||||.+...                       .--|.+.+.+++|+++ +.+++.|||.
T Consensus         5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~-i~fviaTGR~   49 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKV-VTVGVVGGSD   49 (245)
T ss_pred             ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhC-CEEEEECCcC
Confidence            455666 999998887521                       1124577889999977 9999999994

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=95.44  E-value=0.25  Score=45.63  Aligned_cols=110  Identities=17%  Similarity=0.138  Sum_probs=72.4

Q ss_pred             hcCcCcHHHHHHHHHH--HhCCCeEEEecCCCccchHHHHHHHHhCCCCC-----------CC---cceeecCcccCcch
Q 044563          167 AKHLKHMFTLKLFMKL--QVRGWPVILLSRKHEGQRNATTELLISAGYRG-----------WS---SLIMRLDNEMQMDS  230 (290)
Q Consensus       167 ~~apaip~~l~l~~~l--~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-----------~d---~LiLR~~~~~~~~~  230 (290)
                      ...|..|++.+|++.+  .+.|+.+++||.=   .--....+|+++|+..           |+   .|.+++-..+.++.
T Consensus        68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDa---Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~  144 (234)
T PF06888_consen   68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDA---NSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSL  144 (234)
T ss_pred             HcCCCCccHHHHHHHHHhcCCCceEEEEeCC---cHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCc
Confidence            3678899999999999  5689999999984   4456778899999752           21   34455433333332


Q ss_pred             ---HHhhHHHHHHHHhc----C--CeEEEEeCCCcccccCCC-CcceEEEccCCccccc
Q 044563          231 ---REYLSRRRTILQKE----G--FHITGLISNQMDALIGQS-LGKRVFKLPNPLYYSF  279 (290)
Q Consensus       231 ---~~yKs~~R~~i~~~----G--YrIv~~iGDq~sDl~G~~-~g~r~fkLPNPmY~~w  279 (290)
                         --=|...-+++.++    |  |+=|.+|||--+||=-.- .+.+=+.+|=--|..|
T Consensus       145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~  203 (234)
T PF06888_consen  145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLH  203 (234)
T ss_pred             CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHH
Confidence               12455554444443    5  788889999999996532 3344566665444443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=95.37  E-value=0.049  Score=45.89  Aligned_cols=95  Identities=17%  Similarity=0.117  Sum_probs=55.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCc-chHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQM-DSREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|+++|+++.++||-+...    ..-+.+.|+..+ +.++-..+...+| +.-.|+... +++--. -
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~----~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~-~~~~~~-~  157 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH----AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLAL-KKLGLK-P  157 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHH-HHcCCC-c
Confidence            5788999999999999999999999987543    222333676432 3333321111222 222343222 222111 2


Q ss_pred             eEEEEeCCCcccccCC-CCcceEE
Q 044563          247 HITGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~-~~g~r~f  269 (290)
                      .=+..|||...|+.+. ..|-+++
T Consensus       158 ~~~~~vgD~~~di~aA~~~G~~~i  181 (183)
T TIGR01509       158 EECLFVDDSPAGIEAAKAAGMHTV  181 (183)
T ss_pred             ceEEEEcCCHHHHHHHHHcCCEEE
Confidence            2355789999998754 2454443

HAD subfamilies caused by an overly broad single model.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=95.37  E-value=0.045  Score=47.81  Aligned_cols=99  Identities=20%  Similarity=0.236  Sum_probs=60.1

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC-CCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA-GYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~-Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      .++.|+++++++.++++|++++++||-+....   ...+... |+.. .+.++--.+-..+|+ ...|+.    .++..|
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~---~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~----~~~~~~  155 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHT---TFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQH----VLQAEG  155 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhH---HHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHH----HHHHcC
Confidence            35789999999999999999999999764432   2233322 3322 234443322222332 223432    222233


Q ss_pred             Ce--EEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FH--ITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Yr--Iv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -.  =...|||...|+.+. ..|-+++.+++|
T Consensus       156 ~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        156 FSAADAVFFDDNADNIEAANALGITSILVTDK  187 (199)
T ss_pred             CChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence            22  256899999998764 457778777765

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=95.33  E-value=0.046  Score=50.12  Aligned_cols=98  Identities=10%  Similarity=0.016  Sum_probs=60.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC--CcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW--SSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~--d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ...+.||+.++++.|+++|+++.++||.+..   .+..-|+..|..++  +.++-..+....|+ .-.|.    ..+++.
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~---~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~----~a~~~l  171 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTRE---MMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMAL----KNAIEL  171 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHH---HHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHH----HHHHHc
Confidence            3578999999999999999999999997754   44445555443332  33333322222222 22232    333334


Q ss_pred             CC---eEEEEeCCCcccccCC-CCcceEEEcc
Q 044563          245 GF---HITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       245 GY---rIv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                      |-   .=..+|||..+|+.+. ..|-+++-+.
T Consensus       172 ~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~  203 (267)
T PRK13478        172 GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVI  203 (267)
T ss_pred             CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEc
Confidence            43   2367899999999875 3465555554

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.31  E-value=0.036  Score=58.30  Aligned_cols=48  Identities=19%  Similarity=0.236  Sum_probs=36.7

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ  199 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~  199 (290)
                      .++.|++|+||||.+...        +               ..+.+.+.++.|+++|+.|++.|||+...
T Consensus       415 ~~KLIfsDLDGTLLd~d~--------~---------------i~~~t~eAL~~L~ekGI~~VIATGRs~~~  462 (694)
T PRK14502        415 FKKIVYTDLDGTLLNPLT--------Y---------------SYSTALDALRLLKDKELPLVFCSAKTMGE  462 (694)
T ss_pred             eeeEEEEECcCCCcCCCC--------c---------------cCHHHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence            456899999998887521        1               01346778899999999999999998653

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=95.30  E-value=0.046  Score=47.88  Aligned_cols=100  Identities=13%  Similarity=0.204  Sum_probs=58.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC-CCCcceeecCcccCc-chHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR-GWSSLIMRLDNEMQM-DSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~-~~d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|+++++++.|+++|+++.++||-...... +...+...|+. -++.++--.+...+| +...|+..    +.+.|
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~-~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~----~~~~g  166 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHS-AEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLM----LERLG  166 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccch-hhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHH----HHHcC
Confidence            3568999999999999999999999996543321 22334334432 234444322111122 22234322    22233


Q ss_pred             ---CeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 ---FHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 ---YrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                         -+++ +|||...|+.+. ..|-+++.+.+
T Consensus       167 ~~~~~~l-~i~D~~~di~aA~~aG~~~i~v~~  197 (211)
T TIGR02247       167 VAPEECV-FLDDLGSNLKPAAALGITTIKVSD  197 (211)
T ss_pred             CCHHHeE-EEcCCHHHHHHHHHcCCEEEEECC
Confidence               2344 569999999875 35777776655

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=95.27  E-value=0.035  Score=53.00  Aligned_cols=104  Identities=13%  Similarity=0.147  Sum_probs=72.3

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      ++-|-++||.||+|-..                        ..+|||+.+.++.|+++|-.|+|+||-+-..|..=.+-.
T Consensus        20 ~~~DtfifDcDGVlW~g------------------------~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~   75 (306)
T KOG2882|consen   20 DSFDTFIFDCDGVLWLG------------------------EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKF   75 (306)
T ss_pred             hhcCEEEEcCCcceeec------------------------CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHH
Confidence            34579999999987652                        257999999999999999999999999988888888889


Q ss_pred             HhCCCCCC--Ccc---------eeecCcccCcch-HHhhHHHHHHHHhcCCeEEEEeCCC
Q 044563          208 ISAGYRGW--SSL---------IMRLDNEMQMDS-REYLSRRRTILQKEGFHITGLISNQ  255 (290)
Q Consensus       208 ~~~Gy~~~--d~L---------iLR~~~~~~~~~-~~yKs~~R~~i~~~GYrIv~~iGDq  255 (290)
                      ++.||...  +.+         +||......+.. +---+..|++|++.|++-.+.=.|-
T Consensus        76 ~~lG~~~v~e~~i~ssa~~~a~ylk~~~~~~k~Vyvig~~gi~~eL~~aG~~~~g~~~~~  135 (306)
T KOG2882|consen   76 AKLGFNSVKEENIFSSAYAIADYLKKRKPFGKKVYVIGEEGIREELDEAGFEYFGGGPDG  135 (306)
T ss_pred             HHhCccccCcccccChHHHHHHHHHHhCcCCCeEEEecchhhhHHHHHcCceeecCCCCc
Confidence            99999732  111         122111110111 1112457888999997766654444

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=95.26  E-value=0.019  Score=52.08  Aligned_cols=46  Identities=7%  Similarity=0.094  Sum_probs=35.6

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      .|+.|+||||.+.-.        .            ..+..|...+++++++++|+.+++.|||+-
T Consensus         3 li~tDlDGTLl~~~~--------~------------~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~   48 (249)
T TIGR01485         3 LLVSDLDNTLVDHTD--------G------------DNQALLRLNALLEDHRGEDSLLVYSTGRSP   48 (249)
T ss_pred             EEEEcCCCcCcCCCC--------C------------ChHHHHHHHHHHHHhhccCceEEEEcCCCH
Confidence            688999998887310        0            113457788899999999999999999984

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=95.18  E-value=0.039  Score=47.48  Aligned_cols=83  Identities=12%  Similarity=0.053  Sum_probs=55.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhh--HHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYL--SRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yK--s~~R~~i~~~G  245 (290)
                      .+++.|++.++++.|++.|+++.++||-.   +..+..-.+..|+..  ..+.-.. . +++  .-|  ...-+++..++
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~---~~~a~~~~~~lgi~~--~~v~a~~-~-~kP--~~k~~~~~i~~l~~~~  195 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDN---ESTASAIAKQLGIFD--SIVFARV-I-GKP--EPKIFLRIIKELQVKP  195 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSE---HHHHHHHHHHTTSCS--EEEEESH-E-TTT--HHHHHHHHHHHHTCTG
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeeccc---ccccccccccccccc--ccccccc-c-ccc--cchhHHHHHHHHhcCC
Confidence            45788999999999999999999999864   456666677888842  1121111 0 111  123  33344454344


Q ss_pred             CeEEEEeCCCccccc
Q 044563          246 FHITGLISNQMDALI  260 (290)
Q Consensus       246 YrIv~~iGDq~sDl~  260 (290)
                      . .++++||...|..
T Consensus       196 ~-~v~~vGDg~nD~~  209 (215)
T PF00702_consen  196 G-EVAMVGDGVNDAP  209 (215)
T ss_dssp             G-GEEEEESSGGHHH
T ss_pred             C-EEEEEccCHHHHH
Confidence            4 7889999999975

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=95.16  E-value=0.088  Score=44.35  Aligned_cols=90  Identities=13%  Similarity=-0.001  Sum_probs=56.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC--cce------eecCccc-CcchHHhhHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS--SLI------MRLDNEM-QMDSREYLSRRR  238 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d--~Li------LR~~~~~-~~~~~~yKs~~R  238 (290)
                      ..+..|++.++++.++++|++++++|+..   +..+...+...|+..+-  .+.      +.++-.. ....-.-|...-
T Consensus        71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l  147 (177)
T TIGR01488        71 QVALRPGARELISWLKERGIDTVIVSGGF---DFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVL  147 (177)
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHH
Confidence            45567999999999999999999999975   45677778888886431  111      1110000 111123455444


Q ss_pred             HHHHhc-C--CeEEEEeCCCccccc
Q 044563          239 TILQKE-G--FHITGLISNQMDALI  260 (290)
Q Consensus       239 ~~i~~~-G--YrIv~~iGDq~sDl~  260 (290)
                      +++.++ |  +.-+..+||..+|+.
T Consensus       148 ~~~~~~~~~~~~~~~~iGDs~~D~~  172 (177)
T TIGR01488       148 KELLEESKITLKKIIAVGDSVNDLP  172 (177)
T ss_pred             HHHHHHhCCCHHHEEEEeCCHHHHH
Confidence            444332 2  444678999999975

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PLN02151 trehalose-phosphatase

Probab=95.08  E-value=0.047  Score=53.34  Aligned_cols=63  Identities=13%  Similarity=0.170  Sum_probs=42.5

Q ss_pred             HHHHHhhhCCC-CCCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecC
Q 044563          116 VESYFNTLTPS-YNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSR  194 (290)
Q Consensus       116 A~~y~~~~~~~-~~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSg  194 (290)
                      |...++++... ..++-++++|+||||...-         -+|         ..+.+-|++++.++.|. .++.|++|||
T Consensus        83 a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv---------~~P---------~~A~~~~~~~~aL~~La-~~~~vaIvSG  143 (354)
T PLN02151         83 ALNMFEEILHKSEGKQIVMFLDYDGTLSPIV---------DDP---------DRAFMSKKMRNTVRKLA-KCFPTAIVSG  143 (354)
T ss_pred             HHHHHHHHHHhhcCCceEEEEecCccCCCCC---------CCc---------ccccCCHHHHHHHHHHh-cCCCEEEEEC
Confidence            33344444332 2345699999999998531         112         13456788999999999 4679999999


Q ss_pred             CCc
Q 044563          195 KHE  197 (290)
Q Consensus       195 R~e  197 (290)
                      |+-
T Consensus       144 R~~  146 (354)
T PLN02151        144 RCR  146 (354)
T ss_pred             CCH
Confidence            973

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=94.97  E-value=0.22  Score=43.86  Aligned_cols=106  Identities=11%  Similarity=0.112  Sum_probs=58.8

Q ss_pred             CCCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCe--EEEecCCCccch---H
Q 044563          127 YNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWP--VILLSRKHEGQR---N  201 (290)
Q Consensus       127 ~~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~--V~~iSgR~e~~r---~  201 (290)
                      ..|-.++|||.|.||..- +                     +...-|...+.++++++.+..  |.++||-.....   .
T Consensus        38 ~~Gik~li~DkDNTL~~~-~---------------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~   95 (168)
T PF09419_consen   38 KKGIKALIFDKDNTLTPP-Y---------------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDG   95 (168)
T ss_pred             hcCceEEEEcCCCCCCCC-C---------------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccH
Confidence            356679999999987642 1                     112334566777888888875  999999753221   2


Q ss_pred             HHHHHH-HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhc----CCeEEEEeCCCcc-cccCCC
Q 044563          202 ATTELL-ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKE----GFHITGLISNQMD-ALIGQS  263 (290)
Q Consensus       202 ~T~~NL-~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~----GYrIv~~iGDq~s-Dl~G~~  263 (290)
                      .-++.+ ++.|.+   -+.-+.... ++    ++ +..+.+...    ...=+++||||+- |..++.
T Consensus        96 ~~a~~~~~~lgIp---vl~h~~kKP-~~----~~-~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN  154 (168)
T PF09419_consen   96 ERAEALEKALGIP---VLRHRAKKP-GC----FR-EILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGN  154 (168)
T ss_pred             HHHHHHHHhhCCc---EEEeCCCCC-cc----HH-HHHHHHhhccCCCCchhEEEEcchHHHHHHHhh
Confidence            223333 344665   122221111 11    11 222333222    2445789999974 777654

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01686 FkbH FkbH-like domain

Probab=94.96  E-value=0.094  Score=49.80  Aligned_cols=113  Identities=13%  Similarity=0.083  Sum_probs=66.5

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      ++++|+|+|+||-..-      .|.-...      --.-.++.|++.++++.|+++|+++.++|+.++   ..+.+-|+.
T Consensus         3 ~k~~v~DlDnTlw~gv------~~e~g~~------~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~---~~a~~~l~~   67 (320)
T TIGR01686         3 LKVLVLDLDNTLWGGV------LGEDGID------NLNLSPLHKTLQEKIKTLKKQGFLLALASKNDE---DDAKKVFER   67 (320)
T ss_pred             eEEEEEcCCCCCCCCE------EccCCcc------ccccCccHHHHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHh
Confidence            4699999999886421      1110000      001124578999999999999999999999864   456666776


Q ss_pred             ----CCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC
Q 044563          210 ----AGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       210 ----~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~  262 (290)
                          .|...+=..+ +. +.+ ++...++...+ ++ .-+..=+..|||+..|+.+.
T Consensus        68 ~~~~~~~~~~f~~~-~~-~~~-pk~~~i~~~~~-~l-~i~~~~~vfidD~~~d~~~~  119 (320)
T TIGR01686        68 RKDFILQAEDFDAR-SI-NWG-PKSESLRKIAK-KL-NLGTDSFLFIDDNPAERANV  119 (320)
T ss_pred             CccccCcHHHeeEE-EE-ecC-chHHHHHHHHH-Hh-CCCcCcEEEECCCHHHHHHH
Confidence                4543211111 11 111 11222332222 12 23456678999999999875

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=94.89  E-value=0.084  Score=53.80  Aligned_cols=80  Identities=10%  Similarity=0.089  Sum_probs=60.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCC-eEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGW-PVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv-~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      .+++.|++.+.+++|+++|+ ++.++||.+   +..+.+-+++.|...+-.-.+          .+-|...-++++++| 
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~---~~~a~~i~~~lgi~~~f~~~~----------p~~K~~~i~~l~~~~-  425 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDR---RAVAERVARELGIDEVHAELL----------PEDKLEIVKELREKY-  425 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCC---HHHHHHHHHHcCChhhhhccC----------cHHHHHHHHHHHhcC-
Confidence            56889999999999999999 999999975   467778888889853211110          123555556676665 


Q ss_pred             eEEEEeCCCcccccC
Q 044563          247 HITGLISNQMDALIG  261 (290)
Q Consensus       247 rIv~~iGDq~sDl~G  261 (290)
                      +.++++||..+|...
T Consensus       426 ~~v~~vGDg~nD~~a  440 (536)
T TIGR01512       426 GPVAMVGDGINDAPA  440 (536)
T ss_pred             CEEEEEeCCHHHHHH
Confidence            677899999999875

.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=94.79  E-value=0.021  Score=49.32  Aligned_cols=108  Identities=6%  Similarity=0.112  Sum_probs=57.1

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCc-HHHHHHHHHHHhCCCeEEEecCCCccch----------
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKH-MFTLKLFMKLQVRGWPVILLSRKHEGQR----------  200 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apai-p~~l~l~~~l~~~Gv~V~~iSgR~e~~r----------  200 (290)
                      ...||+||||-..+.... +  .-+++.|   .      -+ |++.+.++++++.|++|+++||-..-.+          
T Consensus         2 ia~fD~DgTLi~~~s~~~-f--~~~~~D~---~------~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~   69 (159)
T PF08645_consen    2 IAFFDLDGTLIKTKSGKK-F--PKDPDDW---K------FFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF   69 (159)
T ss_dssp             EEEE-SCTTTEE-STSTT-S---SSTCGG---E------EC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred             EEEEeCCCCccCCCCCCc-C--cCCHHHh---h------hcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence            567999998877643110 0  0134444   2      12 2488888899999999999998743222          


Q ss_pred             -HHHHHHHHhCCCCCCCcceeec-CcccCcchHHhhHHHHHHHHhcCCeE--------EEEeCCCccc
Q 044563          201 -NATTELLISAGYRGWSSLIMRL-DNEMQMDSREYLSRRRTILQKEGFHI--------TGLISNQMDA  258 (290)
Q Consensus       201 -~~T~~NL~~~Gy~~~d~LiLR~-~~~~~~~~~~yKs~~R~~i~~~GYrI--------v~~iGDq~sD  258 (290)
                       .-...-|+..|.+-  .++.-. .+.-|++    +.+.-..+. +.|..        -.+|||..++
T Consensus        70 ~~ki~~il~~l~ip~--~~~~a~~~d~~RKP----~~GM~~~~~-~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   70 HEKIENILKELGIPI--QVYAAPHKDPCRKP----NPGMWEFAL-KDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             HHHHHHHHHHCTS-E--EEEECGCSSTTSTT----SSHHHHHHC-CCTSTT--S-CCC-EEEESSCHC
T ss_pred             HHHHHHHHHHcCCce--EEEecCCCCCCCCC----chhHHHHHH-HhccccccccccceEEEeccCCC
Confidence             33344556778872  222221 1223333    124444444 23432        3688998555

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR00685 T6PP trehalose-phosphatase

Probab=94.78  E-value=0.063  Score=48.85  Aligned_cols=50  Identities=14%  Similarity=0.169  Sum_probs=36.8

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhC-CCeEEEecCCC
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVR-GWPVILLSRKH  196 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~-Gv~V~~iSgR~  196 (290)
                      ++.+++||+||||....         -+|         ..+.+-|++++.++.|.+. +..|+++|||+
T Consensus         2 ~~~~l~lD~DGTL~~~~---------~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~   52 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIV---------PDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRK   52 (244)
T ss_pred             CcEEEEEecCccccCCc---------CCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence            35689999999888631         112         1235568899999999877 45788999996

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=94.58  E-value=0.064  Score=46.24  Aligned_cols=127  Identities=14%  Similarity=0.107  Sum_probs=67.3

Q ss_pred             CCCCcEEEEecccccccChhhhhhc----c--CCCCc------cchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecC
Q 044563          127 YNGLDVVLMDIDDIFASSSKYSNLL----I--DRVNV------RGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSR  194 (290)
Q Consensus       127 ~~g~~AvVfDIDetLsn~~y~~~~~----~--G~~~~------~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSg  194 (290)
                      .++|..+|+|+||||-++.......    .  ...+.      ..|.-=...-....-||+.+|++.+.+. +++++.|+
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~   81 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTM   81 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeC
Confidence            3577899999999887763311000    0  00000      0000000011234578999999999955 99999999


Q ss_pred             CCccchHHHHHHHHhCC-CCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC
Q 044563          195 KHEGQRNATTELLISAG-YRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       195 R~e~~r~~T~~NL~~~G-y~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~  262 (290)
                      -++.....-++.|--.+ |  . +.++-|....    ....|.-.  .+-...-+-+..++|+..-....
T Consensus        82 ~~~~yA~~vl~~ldp~~~~--F~~ri~~rd~~~----~~~~KdL~--~i~~~d~~~vvivDd~~~~~~~~  143 (156)
T TIGR02250        82 GTRAYAQAIAKLIDPDGKY--FGDRIISRDESG----SPHTKSLL--RLFPADESMVVIIDDREDVWPWH  143 (156)
T ss_pred             CcHHHHHHHHHHhCcCCCe--eccEEEEeccCC----CCccccHH--HHcCCCcccEEEEeCCHHHhhcC
Confidence            88766555556554443 2  2 2344454321    11234321  12223455566777776554443

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=94.54  E-value=0.22  Score=43.07  Aligned_cols=104  Identities=13%  Similarity=0.011  Sum_probs=62.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-C-cceeecCc-ccCc-----chHHhhHH-HH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-S-SLIMRLDN-EMQM-----DSREYLSR-RR  238 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d-~LiLR~~~-~~~~-----~~~~yKs~-~R  238 (290)
                      .....|++.++++.++++|++|+++|+-++.   .....++..|+..+ . .+..-.++ ..++     ..-.-|.. .+
T Consensus        85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~---~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~  161 (202)
T TIGR01490        85 ESILYPEARDLIRWHKAEGHTIVLVSASLTI---LVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALA  161 (202)
T ss_pred             HHhccHHHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHH
Confidence            3468999999999999999999999998754   33344556677532 1 12221110 0000     00112333 23


Q ss_pred             HHHHhcCCe--EEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          239 TILQKEGFH--ITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       239 ~~i~~~GYr--Iv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      +.+.+.|+.  .+..+||..+|+.-. ..|..+.+-|+|
T Consensus       162 ~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~  200 (202)
T TIGR01490       162 ELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDK  200 (202)
T ss_pred             HHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCC
Confidence            333444543  456789999999753 346667777775

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=94.52  E-value=0.077  Score=47.62  Aligned_cols=42  Identities=7%  Similarity=0.065  Sum_probs=29.1

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      .|++|+||||.+....            +            ++.-+.++ ++++|+.++++|||+-.
T Consensus         1 li~~DlDgTLl~~~~~------------~------------~~~~~~~~-~~~~gi~~viaTGR~~~   42 (236)
T TIGR02471         1 LIITDLDNTLLGDDEG------------L------------ASFVELLR-GSGDAVGFGIATGRSVE   42 (236)
T ss_pred             CeEEeccccccCCHHH------------H------------HHHHHHHH-hcCCCceEEEEeCCCHH
Confidence            3789999988874210            1            11114555 68999999999999854

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=94.37  E-value=0.19  Score=53.04  Aligned_cols=79  Identities=15%  Similarity=0.140  Sum_probs=58.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      ++|+-|++.+.++.+++.|+++++|||...   ....+--++.|+.   +.+-|-       .-+-|...=++++++|+ 
T Consensus       444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~---~ta~~iA~~lGI~---~v~a~~-------~PedK~~~v~~lq~~g~-  509 (675)
T TIGR01497       444 KDIVKGGIKERFAQLRKMGIKTIMITGDNR---LTAAAIAAEAGVD---DFIAEA-------TPEDKIALIRQEQAEGK-  509 (675)
T ss_pred             cccchhHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCC---EEEcCC-------CHHHHHHHHHHHHHcCC-
Confidence            568999999999999999999999999643   3333444566874   333332       12357777677777765 


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      +++++||-.+|..
T Consensus       510 ~VamvGDG~NDap  522 (675)
T TIGR01497       510 LVAMTGDGTNDAP  522 (675)
T ss_pred             eEEEECCCcchHH
Confidence            7999999999985

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=94.16  E-value=0.26  Score=53.36  Aligned_cols=89  Identities=12%  Similarity=0.115  Sum_probs=59.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-----------------ccCcch
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-----------------EMQMDS  230 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-----------------~~~~~~  230 (290)
                      .+|+-|++.+.++.++++|++|+.+||-+.   ..+.+-.++.|......-.+-++.                 --....
T Consensus       526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~---~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~  602 (884)
T TIGR01522       526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQ---ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARAS  602 (884)
T ss_pred             cCcchhHHHHHHHHHHHCCCeEEEECCCCH---HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECC
Confidence            568999999999999999999999999653   344445567787532211110000                 000012


Q ss_pred             HHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          231 REYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       231 ~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      .+-|...=+.++++| .+++++||-.+|..
T Consensus       603 P~~K~~iv~~lq~~g-~~v~mvGDGvND~p  631 (884)
T TIGR01522       603 PEHKMKIVKALQKRG-DVVAMTGDGVNDAP  631 (884)
T ss_pred             HHHHHHHHHHHHHCC-CEEEEECCCcccHH
Confidence            345766667787787 57889999999986

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=93.95  E-value=0.31  Score=43.43  Aligned_cols=124  Identities=13%  Similarity=0.160  Sum_probs=70.8

Q ss_pred             CcEEEEecccccccChh-hhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc---------
Q 044563          130 LDVVLMDIDDIFASSSK-YSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ---------  199 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y-~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~---------  199 (290)
                      ++++.+|-||||---+- |.      ++   +++|      ..+|++++....+++.|++++.+||-+.--         
T Consensus         5 ~k~lflDRDGtin~d~~~yv------~~---~~~~------~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f   69 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYV------DS---LDDF------QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADF   69 (181)
T ss_pred             CcEEEEcCCCceecCCCccc------Cc---HHHh------ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHH
Confidence            57999999997765432 21      22   3333      357889999999999999999999965311         


Q ss_pred             ---hHHHHHHHHhCCCCCCCcceeecC-cc----cCcc-hHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCC-CcceEE
Q 044563          200 ---RNATTELLISAGYRGWSSLIMRLD-NE----MQMD-SREYLSRRRTILQKEGFHITGLISNQMDALIGQS-LGKRVF  269 (290)
Q Consensus       200 ---r~~T~~NL~~~Gy~~~d~LiLR~~-~~----~~~~-~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~-~g~r~f  269 (290)
                         -+.=.+-|++.|.. .+..+.-+. .+    -++. .--+.+..++..  -.-...-+|||..+|+..+. .|.+.+
T Consensus        70 ~~~~~~m~~~l~~~gv~-id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~--iD~~~s~~VGD~~~Dlq~a~n~gi~~~  146 (181)
T COG0241          70 DKLHNKMLKILASQGVK-IDGILYCPHHPEDNCDCRKPKPGMLLSALKEYN--IDLSRSYVVGDRLTDLQAAENAGIKGV  146 (181)
T ss_pred             HHHHHHHHHHHHHcCCc-cceEEECCCCCCCCCcccCCChHHHHHHHHHhC--CCccceEEecCcHHHHHHHHHCCCCce
Confidence               12344567788852 333332221 11    1221 111222222211  11245578999999997542 343344


Q ss_pred             Ec
Q 044563          270 KL  271 (290)
Q Consensus       270 kL  271 (290)
                      .+
T Consensus       147 ~~  148 (181)
T COG0241         147 LV  148 (181)
T ss_pred             EE
Confidence            43

>PLN02580 trehalose-phosphatase

Probab=93.93  E-value=0.11  Score=51.36  Aligned_cols=49  Identities=10%  Similarity=0.126  Sum_probs=38.2

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      ++-++.||.||||+-.-         -+|         ..+.+-|++.+.++.|.+. ..|.+||||+
T Consensus       118 k~~~LfLDyDGTLaPIv---------~~P---------d~A~~s~~~~~aL~~La~~-~~VAIVSGR~  166 (384)
T PLN02580        118 KKIALFLDYDGTLSPIV---------DDP---------DRALMSDAMRSAVKNVAKY-FPTAIISGRS  166 (384)
T ss_pred             CCeEEEEecCCccCCCC---------CCc---------ccccCCHHHHHHHHHHhhC-CCEEEEeCCC
Confidence            45589999999998641         123         2456678999999999998 5899999997

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=93.93  E-value=0.21  Score=51.02  Aligned_cols=81  Identities=15%  Similarity=0.151  Sum_probs=59.5

Q ss_pred             cCcCcHHHHHHHHHHHhCC-CeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRG-WPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~G-v~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      .+++.|++.+++++|+++| +++.++||.+   +..+.+-+++.|...   .+-+-.       .+-|...-+++..+|.
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~---~~~a~~i~~~lgi~~---~f~~~~-------p~~K~~~v~~l~~~~~  448 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDN---RSAAEAVAAELGIDE---VHAELL-------PEDKLAIVKELQEEGG  448 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCC---HHHHHHHHHHhCCCe---eeccCC-------HHHHHHHHHHHHHcCC
Confidence            5789999999999999999 9999999976   456667778888852   222211       1235455556665665


Q ss_pred             eEEEEeCCCcccccCC
Q 044563          247 HITGLISNQMDALIGQ  262 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~  262 (290)
                       .++++||...|....
T Consensus       449 -~v~~vGDg~nD~~al  463 (556)
T TIGR01525       449 -VVAMVGDGINDAPAL  463 (556)
T ss_pred             -EEEEEECChhHHHHH
Confidence             778999999998753

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=93.88  E-value=0.25  Score=53.74  Aligned_cols=88  Identities=13%  Similarity=0.054  Sum_probs=60.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH-hCCCCCCCcceeecCcc-----------------cCcc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI-SAGYRGWSSLIMRLDNE-----------------MQMD  229 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~-~~Gy~~~d~LiLR~~~~-----------------~~~~  229 (290)
                      .+|+-|++.+.++.+++.|++|+.|||...    .|..+.. +.|...-+..++-+++-                 -..-
T Consensus       577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~----~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~  652 (941)
T TIGR01517       577 KDPLRPGVREAVQECQRAGITVRMVTGDNI----DTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARS  652 (941)
T ss_pred             cCCCchhHHHHHHHHHHCCCEEEEECCCCh----HHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEEC
Confidence            579999999999999999999999999763    4445544 45764222222211110                 0111


Q ss_pred             hHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          230 SREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       230 ~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      ..+-|...=+.++++|+ +++.+||-.+|-.
T Consensus       653 sPe~K~~iV~~lq~~g~-vVam~GDGvNDap  682 (941)
T TIGR01517       653 SPLDKQLLVLMLKDMGE-VVAVTGDGTNDAP  682 (941)
T ss_pred             CHHHHHHHHHHHHHCCC-EEEEECCCCchHH
Confidence            23467777778888888 7899999999985

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=93.86  E-value=0.18  Score=53.19  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=58.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH-hCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI-SAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~-~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      .+|+-|++.+.++.+++.|++++.|||-..    .|.+... +.|..   +.+=|-       .-+-|.+.=++++++| 
T Consensus       439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~----~TA~aIA~elGI~---~v~A~~-------~PedK~~iV~~lQ~~G-  503 (673)
T PRK14010        439 KDVIKDGLVERFRELREMGIETVMCTGDNE----LTAATIAKEAGVD---RFVAEC-------KPEDKINVIREEQAKG-  503 (673)
T ss_pred             ecCCcHHHHHHHHHHHHCCCeEEEECCCCH----HHHHHHHHHcCCc---eEEcCC-------CHHHHHHHHHHHHhCC-
Confidence            679999999999999999999999999653    4555554 55874   333332       1245777777788776 


Q ss_pred             eEEEEeCCCccccc
Q 044563          247 HITGLISNQMDALI  260 (290)
Q Consensus       247 rIv~~iGDq~sDl~  260 (290)
                      ++|+++||-.+|-.
T Consensus       504 ~~VaMtGDGvNDAP  517 (673)
T PRK14010        504 HIVAMTGDGTNDAP  517 (673)
T ss_pred             CEEEEECCChhhHH
Confidence            68999999999964

>PLN02811 hydrolase

Probab=93.71  E-value=0.12  Score=45.96  Aligned_cols=101  Identities=11%  Similarity=0.115  Sum_probs=59.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecC--c-ccCcc-hHHhhHHHHHHHHh
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLD--N-EMQMD-SREYLSRRRTILQK  243 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~--~-~~~~~-~~~yKs~~R~~i~~  243 (290)
                      ..+..||+.++++.|+++|+++.++||-...  ..+...++..|+..+-..+.-.+  + ...|. .-.|.    ..+++
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~--~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~----~a~~~  149 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKR--HFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFL----AAARR  149 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchh--hHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHH----HHHHH
Confidence            4567899999999999999999999996543  23333333335433322333222  1 11222 12232    22332


Q ss_pred             cC---C--eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          244 EG---F--HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       244 ~G---Y--rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .|   .  .=+.+|||...|+... ..|-+++-++++
T Consensus       150 ~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~  186 (220)
T PLN02811        150 FEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDP  186 (220)
T ss_pred             hCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence            22   2  3377999999999865 346677766554

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=93.49  E-value=0.27  Score=52.28  Aligned_cols=88  Identities=15%  Similarity=0.085  Sum_probs=57.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH-HhCCCCCC----Ccce-------e---------ecCccc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL-ISAGYRGW----SSLI-------M---------RLDNEM  226 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL-~~~Gy~~~----d~Li-------L---------R~~~~~  226 (290)
                      .+|+-|++.+..+.+++.|++|+.|||....    |.+.. ++.|...-    +.+.       |         +..+--
T Consensus       440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~----tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf  515 (755)
T TIGR01647       440 FDPPRHDTKETIERARHLGVEVKMVTGDHLA----IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGF  515 (755)
T ss_pred             cCCChhhHHHHHHHHHHCCCeEEEECCCCHH----HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence            5689999999999999999999999997643    33333 35677420    1110       0         000000


Q ss_pred             CcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          227 QMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       227 ~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      ..-..+-|...=++++++|+ +|+++||-.+|-.
T Consensus       516 Ar~~Pe~K~~iV~~lq~~G~-~VamvGDGvNDap  548 (755)
T TIGR01647       516 AEVFPEHKYEIVEILQKRGH-LVGMTGDGVNDAP  548 (755)
T ss_pred             EecCHHHHHHHHHHHHhcCC-EEEEEcCCcccHH
Confidence            11123456666677887875 7999999999964

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=93.40  E-value=0.3  Score=51.92  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=57.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.-|.+.+..+.|+++|++++++||=.   +....+-=++.|...+-.=++ |         +.|.+.=++++++| +
T Consensus       535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn---~~~A~~iA~~lGId~v~Aell-P---------edK~~~V~~l~~~g-~  600 (713)
T COG2217         535 ADELRPDAKEAIAALKALGIKVVMLTGDN---RRTAEAIAKELGIDEVRAELL-P---------EDKAEIVRELQAEG-R  600 (713)
T ss_pred             eCCCChhHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHcChHhheccCC-c---------HHHHHHHHHHHhcC-C
Confidence            57888999999999999999999999944   333444445678754321111 1         24777777888665 8


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      .++++||=.+|=+
T Consensus       601 ~VamVGDGINDAP  613 (713)
T COG2217         601 KVAMVGDGINDAP  613 (713)
T ss_pred             EEEEEeCCchhHH
Confidence            8899999999865

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=93.37  E-value=0.35  Score=41.04  Aligned_cols=84  Identities=11%  Similarity=0.025  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCccee--ecCccc----CcchHH--hhHHHHHHH---H
Q 044563          174 FTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIM--RLDNEM----QMDSRE--YLSRRRTIL---Q  242 (290)
Q Consensus       174 ~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiL--R~~~~~----~~~~~~--yKs~~R~~i---~  242 (290)
                      ++.++++.+++.|++|++||+-+   +..+..-++..|++...-+--  ...+..    +.....  -|...-+++   .
T Consensus        93 ~~~e~i~~~~~~~~~v~IvS~~~---~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~  169 (192)
T PF12710_consen   93 DAMELIRELKDNGIKVVIVSGSP---DEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRD  169 (192)
T ss_dssp             THHHHHHHHHHTTSEEEEEEEEE---HHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHh
Confidence            34499999999999999999964   566666677889874321111  111100    000000  255555555   1


Q ss_pred             --hcCCeEEEEeCCCccccc
Q 044563          243 --KEGFHITGLISNQMDALI  260 (290)
Q Consensus       243 --~~GYrIv~~iGDq~sDl~  260 (290)
                        ..++..+..+||..+|+.
T Consensus       170 ~~~~~~~~~~~iGDs~~D~~  189 (192)
T PF12710_consen  170 EEDIDPDRVIAIGDSINDLP  189 (192)
T ss_dssp             HHTHTCCEEEEEESSGGGHH
T ss_pred             hcCCCCCeEEEEECCHHHHH
Confidence              356899999999999974

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=93.17  E-value=0.52  Score=51.78  Aligned_cols=89  Identities=11%  Similarity=0.025  Sum_probs=57.6

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC------------------------cceeecC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS------------------------SLIMRLD  223 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d------------------------~LiLR~~  223 (290)
                      .+|+-|++.+.++.++++|++|+++|||....   ..+-.++.|.-.-+                        .+++-+.
T Consensus       566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~  642 (997)
T TIGR01106       566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT---AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS  642 (997)
T ss_pred             cCCChHHHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence            57999999999999999999999999998532   22233344542100                        0122111


Q ss_pred             ccc-------------------CcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          224 NEM-------------------QMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       224 ~~~-------------------~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      .-.                   .....+-|...=+.+++.|| +++.+||-.+|..
T Consensus       643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~-vv~~~GDG~ND~p  697 (997)
T TIGR01106       643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGA-IVAVTGDGVNDSP  697 (997)
T ss_pred             HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCC-EEEEECCCcccHH
Confidence            100                   01122356666677788888 8899999999975

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=93.15  E-value=0.41  Score=50.59  Aligned_cols=78  Identities=14%  Similarity=0.160  Sum_probs=57.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH-HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL-ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL-~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ++|+-|++.+.++++++.|++++.|||=.    ..|.+.. ++.|..   +.+=|-       .-+-|-+.=++++++| 
T Consensus       443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn----~~TA~aIA~elGId---~v~A~~-------~PedK~~iV~~lQ~~G-  507 (679)
T PRK01122        443 KDIVKPGIKERFAELRKMGIKTVMITGDN----PLTAAAIAAEAGVD---DFLAEA-------TPEDKLALIRQEQAEG-  507 (679)
T ss_pred             eccCchhHHHHHHHHHHCCCeEEEECCCC----HHHHHHHHHHcCCc---EEEccC-------CHHHHHHHHHHHHHcC-
Confidence            56888999999999999999999999944    3444444 456884   333232       1245766667777766 


Q ss_pred             eEEEEeCCCccccc
Q 044563          247 HITGLISNQMDALI  260 (290)
Q Consensus       247 rIv~~iGDq~sDl~  260 (290)
                      ++|+++||-.+|-.
T Consensus       508 ~~VaMtGDGvNDAP  521 (679)
T PRK01122        508 RLVAMTGDGTNDAP  521 (679)
T ss_pred             CeEEEECCCcchHH
Confidence            58999999999964

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=93.09  E-value=0.29  Score=44.93  Aligned_cols=53  Identities=17%  Similarity=0.047  Sum_probs=42.7

Q ss_pred             CccchHHHHHh---------hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          156 NVRGYIECIEE---------AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       156 ~~~~w~~Wv~~---------~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      +|.+|.+...+         .....+||+.+|++.|+.+|+.+-++|++++...+.-+.++.
T Consensus        69 dp~s~ee~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~  130 (222)
T KOG2914|consen   69 DPVSREEFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE  130 (222)
T ss_pred             CCCCHHHHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh
Confidence            55566666532         467789999999999999999999999998887777666666

>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known

Probab=92.98  E-value=0.4  Score=43.30  Aligned_cols=97  Identities=13%  Similarity=0.163  Sum_probs=66.8

Q ss_pred             ccchHHHHHhhcCcCcHHHHHHHHH-HHhCCCeEEEecCCCccc-hHHHHHHHHhCCCCCCCcceeecCcccCcchHHhh
Q 044563          157 VRGYIECIEEAKHLKHMFTLKLFMK-LQVRGWPVILLSRKHEGQ-RNATTELLISAGYRGWSSLIMRLDNEMQMDSREYL  234 (290)
Q Consensus       157 ~~~w~~Wv~~~~apaip~~l~l~~~-l~~~Gv~V~~iSgR~e~~-r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yK  234 (290)
                      +..|..|-++       .++++++. +++...=.++||||+|.. .+.-.+-|...|. ..+.++||+.+....++..||
T Consensus        48 ~~~w~gwWNe-------~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L-~Fd~v~LKp~~~~~~sTm~fK  119 (197)
T PF10307_consen   48 KRAWEGWWNE-------NIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGL-EFDAVCLKPENQRFSSTMDFK  119 (197)
T ss_pred             cccccchhhH-------HHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCC-CccEEEeCcccccCccccHHH
Confidence            3446666644       47788776 556666778999999865 4555555777788 489999998866677889999


Q ss_pred             HHHHHHHHhc--CCeEEEEeCCCcccccC
Q 044563          235 SRRRTILQKE--GFHITGLISNQMDALIG  261 (290)
Q Consensus       235 s~~R~~i~~~--GYrIv~~iGDq~sDl~G  261 (290)
                      ...-..+...  .-.=|-+-.|..+=+.|
T Consensus       120 ~~~l~~ll~~Y~~~~eI~IYeDR~~hvk~  148 (197)
T PF10307_consen  120 QAFLEDLLHTYKNAEEIRIYEDRPKHVKG  148 (197)
T ss_pred             HHHHHHHHHhcCCCCEEEEEcCCHHHHHH
Confidence            9998888742  21223455666554433

There are two characteristic sequence motifs, GGWW and TGR.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=92.60  E-value=0.59  Score=48.02  Aligned_cols=80  Identities=10%  Similarity=0.133  Sum_probs=57.6

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++..|++.+++++|+++|+++.++||.++   ....+-++..|+.     ++..-.      .+-|.+.-++++++| +
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~---~~a~~ia~~lgi~-----~~~~~~------p~~K~~~v~~l~~~~-~  467 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNR---KTAKAVAKELGIN-----VRAEVL------PDDKAALIKELQEKG-R  467 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCH---HHHHHHHHHcCCc-----EEccCC------hHHHHHHHHHHHHcC-C
Confidence            567899999999999999999999999764   4555666778884     111100      124555556666665 4


Q ss_pred             EEEEeCCCcccccCC
Q 044563          248 ITGLISNQMDALIGQ  262 (290)
Q Consensus       248 Iv~~iGDq~sDl~G~  262 (290)
                      .++++||-.+|....
T Consensus       468 ~v~~VGDg~nD~~al  482 (562)
T TIGR01511       468 VVAMVGDGINDAPAL  482 (562)
T ss_pred             EEEEEeCCCccHHHH
Confidence            577999999998753

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=92.39  E-value=0.73  Score=49.91  Aligned_cols=86  Identities=16%  Similarity=0.127  Sum_probs=58.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHH-HHhCCCCCCCcceeecCcc-----------------cCcc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTEL-LISAGYRGWSSLIMRLDNE-----------------MQMD  229 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~N-L~~~Gy~~~d~LiLR~~~~-----------------~~~~  229 (290)
                      .+|+-|++.+.++.+++.|++|+.|||-..    .|.+. =++.|... +.. +-+.+-                 -..-
T Consensus       513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~----~tA~aIA~~lGI~~-~~v-~~g~~l~~~~~~el~~~~~~~~vfAr~  586 (867)
T TIGR01524       513 LDPPKESTKEAIAALFKNGINVKVLTGDNE----IVTARICQEVGIDA-NDF-LLGADIEELSDEELARELRKYHIFARL  586 (867)
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCCC-CCe-eecHhhhhCCHHHHHHHhhhCeEEEEC
Confidence            679999999999999999999999999543    34444 34568742 111 111000                 0011


Q ss_pred             hHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          230 SREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       230 ~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      ..+-|...=+.++++|+ +|+++||-.+|..
T Consensus       587 ~Pe~K~~iV~~lq~~G~-vVam~GDGvNDap  616 (867)
T TIGR01524       587 TPMQKSRIIGLLKKAGH-TVGFLGDGINDAP  616 (867)
T ss_pred             CHHHHHHHHHHHHhCCC-EEEEECCCcccHH
Confidence            23457777778888876 7899999999975

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=92.37  E-value=0.21  Score=52.73  Aligned_cols=51  Identities=14%  Similarity=0.172  Sum_probs=38.6

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhC-CCeEEEecCCCc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVR-GWPVILLSRKHE  197 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e  197 (290)
                      .+..++||+||||...-         ..+         ..+.+-+.+++.++.|.+. |+.|+++|||+-
T Consensus       491 ~~rLi~~D~DGTL~~~~---------~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~  542 (726)
T PRK14501        491 SRRLLLLDYDGTLVPFA---------PDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRDR  542 (726)
T ss_pred             cceEEEEecCccccCCC---------CCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence            45699999999888641         011         1234557899999999994 999999999974

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=92.20  E-value=0.72  Score=50.22  Aligned_cols=86  Identities=14%  Similarity=0.091  Sum_probs=57.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH-HhCCCCCCCcceeecC-----------------cccCcc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL-ISAGYRGWSSLIMRLD-----------------NEMQMD  229 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL-~~~Gy~~~d~LiLR~~-----------------~~~~~~  229 (290)
                      .+|+-|++.+.++.+++.|++|+.|||=..    .|.+.. ++.|..+ +. ++-+.                 .--..-
T Consensus       548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~----~tA~aIA~~lGI~~-~~-vi~G~el~~~~~~el~~~v~~~~VfAr~  621 (903)
T PRK15122        548 LDPPKESAAPAIAALRENGVAVKVLTGDNP----IVTAKICREVGLEP-GE-PLLGTEIEAMDDAALAREVEERTVFAKL  621 (903)
T ss_pred             cCccHHHHHHHHHHHHHCCCeEEEECCCCH----HHHHHHHHHcCCCC-CC-ccchHhhhhCCHHHHHHHhhhCCEEEEe
Confidence            579999999999999999999999999542    333333 4557741 11 11000                 000111


Q ss_pred             hHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          230 SREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       230 ~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      ..+-|...=+.++++|+ +|+++||-.+|-.
T Consensus       622 sPe~K~~iV~~Lq~~G~-vVamtGDGvNDaP  651 (903)
T PRK15122        622 TPLQKSRVLKALQANGH-TVGFLGDGINDAP  651 (903)
T ss_pred             CHHHHHHHHHHHHhCCC-EEEEECCCchhHH
Confidence            23457777778887765 7999999999964

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=91.93  E-value=0.45  Score=42.16  Aligned_cols=92  Identities=8%  Similarity=-0.089  Sum_probs=54.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC-CCC---------CcceeecCcccCc----chHHh
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY-RGW---------SSLIMRLDNEMQM----DSREY  233 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy-~~~---------d~LiLR~~~~~~~----~~~~y  233 (290)
                      ..+..||+.++++.++++|++++++|+..+.   .....|+..+. ...         +.+.++.+.....    .--.-
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~---~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~  144 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDF---FVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCC  144 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHH---HHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCC
Confidence            5789999999999999999999999998643   34444444432 111         1111111110000    00012


Q ss_pred             hHHHHHHHHhcCCeEEEEeCCCcccccCCC
Q 044563          234 LSRRRTILQKEGFHITGLISNQMDALIGQS  263 (290)
Q Consensus       234 Ks~~R~~i~~~GYrIv~~iGDq~sDl~G~~  263 (290)
                      |...-+++.....++ ..|||..+|+....
T Consensus       145 K~~~l~~~~~~~~~~-i~iGDg~~D~~~a~  173 (214)
T TIGR03333       145 KPSLIRKLSEPNDYH-IVIGDSVTDVEAAK  173 (214)
T ss_pred             HHHHHHHHhhcCCcE-EEEeCCHHHHHHHH
Confidence            444444444455666 57899999998653

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=91.45  E-value=0.26  Score=42.40  Aligned_cols=84  Identities=13%  Similarity=0.074  Sum_probs=52.9

Q ss_pred             CcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC-CCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe--
Q 044563          171 KHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG-YRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH--  247 (290)
Q Consensus       171 aip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G-y~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr--  247 (290)
                      .-||+.+|++.+.+. ++|++.|.-++..-..-++.|.-.+ +  .+..+-|......+.. -.|     .|..-|..  
T Consensus        43 ~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~--f~~~l~r~~~~~~~~~-~~K-----~L~~l~~~~~  113 (162)
T TIGR02251        43 KRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV--ISRRLYRESCVFTNGK-YVK-----DLSLVGKDLS  113 (162)
T ss_pred             ECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE--EeEEEEccccEEeCCC-EEe-----EchhcCCChh
Confidence            468999999999988 9999999987766566666665433 2  2345555433221111 122     23333322  


Q ss_pred             EEEEeCCCcccccCCC
Q 044563          248 ITGLISNQMDALIGQS  263 (290)
Q Consensus       248 Iv~~iGDq~sDl~G~~  263 (290)
                      =+.+|||...|+.+..
T Consensus       114 ~vIiVDD~~~~~~~~~  129 (162)
T TIGR02251       114 KVIIIDNSPYSYSLQP  129 (162)
T ss_pred             hEEEEeCChhhhccCc
Confidence            2568999999998764

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=91.35  E-value=0.2  Score=45.12  Aligned_cols=48  Identities=15%  Similarity=0.099  Sum_probs=28.6

Q ss_pred             EEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCC-eEEEecCCCccc
Q 044563          134 LMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGW-PVILLSRKHEGQ  199 (290)
Q Consensus       134 VfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv-~V~~iSgR~e~~  199 (290)
                      .||.||||...-         -+|         ..+.+.|+++++++.|.+..- .|++||||+-..
T Consensus         1 ~lDyDGTL~p~~---------~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~   49 (235)
T PF02358_consen    1 FLDYDGTLAPIV---------DDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDD   49 (235)
T ss_dssp             EEE-TTTSS------------S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHH
T ss_pred             CcccCCccCCCC---------CCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH
Confidence            489999998641         112         256778999999999998855 899999998543

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=91.25  E-value=0.79  Score=48.76  Aligned_cols=78  Identities=10%  Similarity=0.049  Sum_probs=57.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++..|++.+.++.|+++|++++++||..   +..+.+-.+..|+..+..           ...+-|...=++++++  .
T Consensus       566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~---~~~a~~ia~~lgi~~~~~-----------~~p~~K~~~v~~l~~~--~  629 (741)
T PRK11033        566 QDTLRADARQAISELKALGIKGVMLTGDN---PRAAAAIAGELGIDFRAG-----------LLPEDKVKAVTELNQH--A  629 (741)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCCeecC-----------CCHHHHHHHHHHHhcC--C
Confidence            46889999999999999999999999964   556777788889852111           0112455555566543  3


Q ss_pred             EEEEeCCCcccccC
Q 044563          248 ITGLISNQMDALIG  261 (290)
Q Consensus       248 Iv~~iGDq~sDl~G  261 (290)
                      .++++||-.+|..-
T Consensus       630 ~v~mvGDgiNDapA  643 (741)
T PRK11033        630 PLAMVGDGINDAPA  643 (741)
T ss_pred             CEEEEECCHHhHHH
Confidence            68999999999753

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=91.17  E-value=1.2  Score=48.47  Aligned_cols=89  Identities=11%  Similarity=0.047  Sum_probs=57.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCc----ceeecCcc-----------------c
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSS----LIMRLDNE-----------------M  226 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~----LiLR~~~~-----------------~  226 (290)
                      .+|+-|++.+.++.+++.|++|+++||.+.   ..+.+-.++.|...-+.    ..+-++.-                 -
T Consensus       535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~---~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~  611 (917)
T TIGR01116       535 LDPPRPEVADAIEKCRTAGIRVIMITGDNK---ETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLF  611 (917)
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEecCCCH---HHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEE
Confidence            678999999999999999999999999753   33444555667632110    11110000                 0


Q ss_pred             CcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          227 QMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       227 ~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      .....+-|...=+.+++.|+ +++.+||-.+|..
T Consensus       612 ar~~P~~K~~iV~~lq~~g~-~va~iGDG~ND~~  644 (917)
T TIGR01116       612 SRVEPSHKSELVELLQEQGE-IVAMTGDGVNDAP  644 (917)
T ss_pred             EecCHHHHHHHHHHHHhcCC-eEEEecCCcchHH
Confidence            00112345555566777765 6789999999986

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=91.16  E-value=1.1  Score=48.93  Aligned_cols=87  Identities=16%  Similarity=0.210  Sum_probs=57.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCc-----------------ccCcch
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDN-----------------EMQMDS  230 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~-----------------~~~~~~  230 (290)
                      .+|+-|++.+.++.+++.|++|+.|||=.+   ....+-=++.|..+ +. ++-+.+                 --..-.
T Consensus       548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~---~tA~~IA~~lGI~~-~~-v~~G~el~~l~~~el~~~~~~~~VfAr~s  622 (902)
T PRK10517        548 LDPPKETTAPALKALKASGVTVKILTGDSE---LVAAKVCHEVGLDA-GE-VLIGSDIETLSDDELANLAERTTLFARLT  622 (902)
T ss_pred             hCcchhhHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCCc-cC-ceeHHHHHhCCHHHHHHHHhhCcEEEEcC
Confidence            678999999999999999999999999543   22223334567741 11 111000                 000112


Q ss_pred             HHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          231 REYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       231 ~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      .+-|...=+.++++| ++|+++||-.+|-.
T Consensus       623 Pe~K~~IV~~Lq~~G-~vVam~GDGvNDaP  651 (902)
T PRK10517        623 PMHKERIVTLLKREG-HVVGFMGDGINDAP  651 (902)
T ss_pred             HHHHHHHHHHHHHCC-CEEEEECCCcchHH
Confidence            345767667787776 57899999999975

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=91.13  E-value=0.55  Score=42.72  Aligned_cols=105  Identities=11%  Similarity=0.039  Sum_probs=58.1

Q ss_pred             hHHHHHh--hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC---CCCCC-CcceeecCcccCcchHHh
Q 044563          160 YIECIEE--AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA---GYRGW-SSLIMRLDNEMQMDSREY  233 (290)
Q Consensus       160 w~~Wv~~--~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~---Gy~~~-d~LiLR~~~~~~~~~~~y  233 (290)
                      |.+....  .+.++.|++.+++++++++|+++.++|+.+..   .+..-+...   ++..+ +..+ -......++.-.|
T Consensus        83 w~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~---~~~~~~~~~~~~~L~~~f~~~f-d~~~g~KP~p~~y  158 (220)
T TIGR01691        83 WRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVP---AQKLLFGHSDAGNLTPYFSGYF-DTTVGLKTEAQSY  158 (220)
T ss_pred             HHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHhhccccchhhhcceEE-EeCcccCCCHHHH
Confidence            4444333  34678999999999999999999999997643   222223332   22211 1111 1110111222234


Q ss_pred             hHHHHHHHHhcCCe--EEEEeCCCcccccCC-CCcceEEEcc
Q 044563          234 LSRRRTILQKEGFH--ITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       234 Ks~~R~~i~~~GYr--Iv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                      ...    +++-|-.  =+..|||...|+.+. ..|-+++.+-
T Consensus       159 ~~i----~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~  196 (220)
T TIGR01691       159 VKI----AGQLGSPPREILFLSDIINELDAARKAGLHTGQLV  196 (220)
T ss_pred             HHH----HHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEE
Confidence            322    2222321  156999999999864 3466665553

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=90.85  E-value=1.5  Score=41.57  Aligned_cols=55  Identities=25%  Similarity=0.224  Sum_probs=46.2

Q ss_pred             CCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCC
Q 044563          155 VNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGY  212 (290)
Q Consensus       155 ~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy  212 (290)
                      ++.+.-++++.....++.||+.+|++.|+++|+++.++|+=   .+.....-|+.+|+
T Consensus       106 ~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G---~~~~Ie~vL~~lgl  160 (277)
T TIGR01544       106 FPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAG---IGNVLEEVLRQAGV  160 (277)
T ss_pred             CCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHHcCC
Confidence            56666777777778999999999999999999999999984   45677777888887

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=90.49  E-value=1.3  Score=49.15  Aligned_cols=89  Identities=9%  Similarity=-0.008  Sum_probs=57.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC----------CcceeecCccc-----------
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW----------SSLIMRLDNEM-----------  226 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~----------d~LiLR~~~~~-----------  226 (290)
                      .+|+-|++.+.++.+++.|++|+.|||....   .+..-=++.|+..-          +.+.+-+..-.           
T Consensus       644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~---tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~  720 (1053)
T TIGR01523       644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPE---TAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK  720 (1053)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence            5689999999999999999999999997643   22222335566311          11121111000           


Q ss_pred             ------CcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          227 ------QMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       227 ------~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                            ..-..+-|...-+.++++|+ +++.+||-.+|..
T Consensus       721 ~~~~V~ar~sP~~K~~iV~~lq~~g~-~Vam~GDGvNDap  759 (1053)
T TIGR01523       721 ALCLVIARCAPQTKVKMIEALHRRKA-FCAMTGDGVNDSP  759 (1053)
T ss_pred             hcCeEEEecCHHHHHHHHHHHHhcCC-eeEEeCCCcchHH
Confidence                  11123457677777887877 6789999999975

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=90.29  E-value=1.5  Score=39.91  Aligned_cols=103  Identities=12%  Similarity=0.072  Sum_probs=61.8

Q ss_pred             hHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC---CCcceeecC--------cccCc
Q 044563          160 YIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG---WSSLIMRLD--------NEMQM  228 (290)
Q Consensus       160 w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~---~d~LiLR~~--------~~~~~  228 (290)
                      -...+...+...-||+.+|...|+++|.+|++|||--...-+.-. +  ..|.|-   +...++...        .....
T Consensus        78 v~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~--~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt  154 (227)
T KOG1615|consen   78 VEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-E--QLGIPKSNIYANELLFDKDGKYLGFDTNEPT  154 (227)
T ss_pred             HHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-H--HhCCcHhhhhhheeeeccCCcccccccCCcc
Confidence            344555667888899999999999999999999996532222111 1  223321   122222211        11111


Q ss_pred             chHHhhHHHHHHHHh-cCCeEEEEeCCCcccccCCCCc
Q 044563          229 DSREYLSRRRTILQK-EGFHITGLISNQMDALIGQSLG  265 (290)
Q Consensus       229 ~~~~yKs~~R~~i~~-~GYrIv~~iGDq~sDl~G~~~g  265 (290)
                      +...-|.+.-++|.+ -.|.-+.+|||--.||.-.+-|
T Consensus       155 sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa  192 (227)
T KOG1615|consen  155 SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPA  192 (227)
T ss_pred             ccCCccHHHHHHHHhCCChheeEEecCCccccccCCch
Confidence            222346666666653 2367789999999999865433

>PTZ00445 p36-lilke protein; Provisional

Probab=90.29  E-value=0.66  Score=42.53  Aligned_cols=163  Identities=13%  Similarity=0.088  Sum_probs=92.7

Q ss_pred             hHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhCCCCCCCcEEEEecccccccChhhhhhccCCC-CccchHHHHHhhcCcC
Q 044563           93 RGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRV-NVRGYIECIEEAKHLK  171 (290)
Q Consensus        93 ~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~~~~~g~~AvVfDIDetLsn~~y~~~~~~G~~-~~~~w~~Wv~~~~apa  171 (290)
                      ...++.|+.++++.  ...--+.|..+.+.+..  .|-.+|++|.|-||-...     - |.+ ++.  +. ...---.+
T Consensus        10 ~~~~~~~~~~~~~~--~~~~~~~~~~~v~~L~~--~GIk~Va~D~DnTlI~~H-----s-gG~~~~~--~~-~~~~~~~~   76 (219)
T PTZ00445         10 HDAFKEYIESGLFD--HLNPHESADKFVDLLNE--CGIKVIASDFDLTMITKH-----S-GGYIDPD--ND-DIRVLTSV   76 (219)
T ss_pred             HHHHHHHHHhcccc--cCCHHHHHHHHHHHHHH--cCCeEEEecchhhhhhhh-----c-ccccCCC--cc-hhhhhccC
Confidence            35688888887765  44555566667666554  456799999999766531     1 222 111  00 00111225


Q ss_pred             cHHHHHHHHHHHhCCCeEEEecCCCccc------------hHHHHHHHHh-----------CCCCC-CCc------ceee
Q 044563          172 HMFTLKLFMKLQVRGWPVILLSRKHEGQ------------RNATTELLIS-----------AGYRG-WSS------LIMR  221 (290)
Q Consensus       172 ip~~l~l~~~l~~~Gv~V~~iSgR~e~~------------r~~T~~NL~~-----------~Gy~~-~d~------LiLR  221 (290)
                      -|....+.+.|++.|++|+++|=-++..            .+--..-|++           +.||. |+.      +-|.
T Consensus        77 tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~  156 (219)
T PTZ00445         77 TPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLD  156 (219)
T ss_pred             CHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhccc
Confidence            6778899999999999999999766532            1122222331           24564 532      2222


Q ss_pred             cCcccCcchHHhhHHHHHHHHhcCCeE----EEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          222 LDNEMQMDSREYLSRRRTILQKEGFHI----TGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       222 ~~~~~~~~~~~yKs~~R~~i~~~GYrI----v~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      .++.      ..|+---+++. +.+.|    +..|+|......+. ..|-.++-+++|.
T Consensus       157 KPdp------~iK~yHle~ll-~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e  208 (219)
T PTZ00445        157 APMP------LDKSYHLKQVC-SDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE  208 (219)
T ss_pred             CCCc------cchHHHHHHHH-HHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence            2222      23433113333 22444    67899988877764 2577777777764

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=90.13  E-value=6.4  Score=36.65  Aligned_cols=128  Identities=15%  Similarity=0.084  Sum_probs=79.3

Q ss_pred             CcEEEEeccc-ccccChhhh-hhccCC----------CCccchHHHHHh-------------------hcCcCcHHHHHH
Q 044563          130 LDVVLMDIDD-IFASSSKYS-NLLIDR----------VNVRGYIECIEE-------------------AKHLKHMFTLKL  178 (290)
Q Consensus       130 ~~AvVfDIDe-tLsn~~y~~-~~~~G~----------~~~~~w~~Wv~~-------------------~~apaip~~l~l  178 (290)
                      +-.++||-|. .++-+.+-. ....|.          +-..-|++++..                   ..-|..|+++++
T Consensus        13 ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~l   92 (256)
T KOG3120|consen   13 RILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVRL   92 (256)
T ss_pred             cEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHHH
Confidence            3489999999 555554421 111110          212237777641                   367899999999


Q ss_pred             HHHHHhCCC-eEEEecCCCccchHHHHHHHHhCCCCC--------------CCcceeecCcc-c---CcchHHhhHHHHH
Q 044563          179 FMKLQVRGW-PVILLSRKHEGQRNATTELLISAGYRG--------------WSSLIMRLDNE-M---QMDSREYLSRRRT  239 (290)
Q Consensus       179 ~~~l~~~Gv-~V~~iSgR~e~~r~~T~~NL~~~Gy~~--------------~d~LiLR~~~~-~---~~~~~~yKs~~R~  239 (290)
                      ++.+++.|. .+++||.-.   --.-.++|+++|++.              -.+|.+|+--. +   .+...-=|-..-.
T Consensus        93 ik~~ak~g~~eliIVSDaN---sfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~  169 (256)
T KOG3120|consen   93 IKSAAKLGCFELIIVSDAN---SFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLD  169 (256)
T ss_pred             HHHHHhCCCceEEEEecCc---hhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHH
Confidence            999999997 999999743   345567888888641              12577776432 1   2222223333333


Q ss_pred             HHH----hcC--CeEEEEeCCCccccc
Q 044563          240 ILQ----KEG--FHITGLISNQMDALI  260 (290)
Q Consensus       240 ~i~----~~G--YrIv~~iGDq~sDl~  260 (290)
                      +++    ++|  |.=+.++||--+||-
T Consensus       170 ~~~~s~~~~gv~yer~iYvGDG~nD~C  196 (256)
T KOG3120|consen  170 ELVASQLKDGVRYERLIYVGDGANDFC  196 (256)
T ss_pred             HHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence            333    233  656779999999994

>PRK10671 copA copper exporting ATPase; Provisional

Probab=89.18  E-value=1.6  Score=46.96  Aligned_cols=80  Identities=11%  Similarity=0.197  Sum_probs=57.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++..|++.+.++.+++.|++++++||.++   ..+.+-++..|...   .+-.-.       .+.|.+.-+++..+|. 
T Consensus       648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~---~~a~~ia~~lgi~~---~~~~~~-------p~~K~~~i~~l~~~~~-  713 (834)
T PRK10671        648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNP---TTANAIAKEAGIDE---VIAGVL-------PDGKAEAIKRLQSQGR-  713 (834)
T ss_pred             cCcchhhHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHHHHcCCCE---EEeCCC-------HHHHHHHHHHHhhcCC-
Confidence            567889999999999999999999999654   45556677788852   222111       1246666666766665 


Q ss_pred             EEEEeCCCcccccC
Q 044563          248 ITGLISNQMDALIG  261 (290)
Q Consensus       248 Iv~~iGDq~sDl~G  261 (290)
                      .++.+||..+|..-
T Consensus       714 ~v~~vGDg~nD~~a  727 (834)
T PRK10671        714 QVAMVGDGINDAPA  727 (834)
T ss_pred             EEEEEeCCHHHHHH
Confidence            47799999999864

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=89.06  E-value=1.8  Score=42.19  Aligned_cols=43  Identities=21%  Similarity=0.192  Sum_probs=34.2

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhC----CCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVR----GWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~----Gv~V~~iSgR~e  197 (290)
                      =+++|||||+|--.                        ..++|++.+-++.|...    .+..+|+||=..
T Consensus        36 fgfafDIDGVL~RG------------------------~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg   82 (389)
T KOG1618|consen   36 FGFAFDIDGVLFRG------------------------HRPIPGALKALRRLVDNQGQLKIPFVFLTNGGG   82 (389)
T ss_pred             eeEEEecccEEEec------------------------CCCCcchHHHHHHHHhcCCCeeccEEEEeCCCC
Confidence            38999999966431                        14588899999999888    899999999754

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=88.78  E-value=1.7  Score=43.76  Aligned_cols=76  Identities=18%  Similarity=0.159  Sum_probs=54.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++..|++.+..+.+++.|++++++||..+..-....+.|   |.      +-+       -..+.|...=++++++|+ 
T Consensus       345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l---gi------~~~-------~~p~~K~~~v~~l~~~g~-  407 (499)
T TIGR01494       345 EDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL---GI------FAR-------VTPEEKAALVEALQKKGR-  407 (499)
T ss_pred             cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---Cc------eec-------cCHHHHHHHHHHHHHCCC-
Confidence            4688899999999999999999999998764433333333   53      111       123467666667777774 


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      .++.+||-.+|..
T Consensus       408 ~v~~vGDg~nD~~  420 (499)
T TIGR01494       408 VVAMTGDGVNDAP  420 (499)
T ss_pred             EEEEECCChhhHH
Confidence            5789999999984

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=88.69  E-value=0.7  Score=50.11  Aligned_cols=49  Identities=12%  Similarity=0.246  Sum_probs=37.5

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHH-HhCCCeEEEecCCCc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKL-QVRGWPVILLSRKHE  197 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l-~~~Gv~V~~iSgR~e  197 (290)
                      .+.++++|.||||....-        .            ...+-|.++++++.| ...|..|+++|||+-
T Consensus       595 ~~rlI~LDyDGTLlp~~~--------~------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~  644 (854)
T PLN02205        595 TTRAILLDYDGTLMPQAS--------I------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSR  644 (854)
T ss_pred             cCeEEEEecCCcccCCcc--------c------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCH
Confidence            356999999998885410        0            123457899999997 788999999999974

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=88.66  E-value=0.65  Score=40.84  Aligned_cols=136  Identities=13%  Similarity=0.039  Sum_probs=61.6

Q ss_pred             CcEEEEecccccccChhhhhhccCCC---Ccc--chHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHH
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRV---NVR--GYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATT  204 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~---~~~--~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~  204 (290)
                      |..||||+|.||-.-.-+.. ....|   +..  -.+.  .-.+-.-.|++.+.++.|+.+|++|.+-|.=++.  +...
T Consensus         3 PklvvFDLD~TlW~~~~~~~-~~~Pf~~~~~~~~v~D~--~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P--~~A~   77 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTH-VGPPFKKISNGNVVVDS--RGEEVSLYPDVPEILQELKERGVKLAVASRTDEP--DWAR   77 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTS-S-S-EEE-TTS--EEET--T--EE---TTHHHHHHHHHHCT--EEEEE--S-H--HHHH
T ss_pred             CcEEEEcCcCCCCchhHhhc-cCCCceecCCCCEEEeC--CCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh--HHHH
Confidence            67999999999987654432 11111   110  0111  0113345788999999999999999999854433  5667


Q ss_pred             HHHHhCCCCC--CCcceeecC---cccCcchHHhhHHHHHHHH-h--cCCeEEEEeCCCcccccCCC-CcceEEEccC
Q 044563          205 ELLISAGYRG--WSSLIMRLD---NEMQMDSREYLSRRRTILQ-K--EGFHITGLISNQMDALIGQS-LGKRVFKLPN  273 (290)
Q Consensus       205 ~NL~~~Gy~~--~d~LiLR~~---~~~~~~~~~yKs~~R~~i~-~--~GYrIv~~iGDq~sDl~G~~-~g~r~fkLPN  273 (290)
                      +-|+..+.+.  ....-|..-   .+-...   -|..-.++|. +  --|.=...++|..-...-.. .|-.....||
T Consensus        78 ~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~  152 (169)
T PF12689_consen   78 ELLKLLEIDDADGDGVPLIEYFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPD  152 (169)
T ss_dssp             HHHHHTT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SS
T ss_pred             HHHHhcCCCccccccccchhhcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCC
Confidence            7777777751  111111100   000000   1333333332 1  23666778888766543322 5666666777

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=88.25  E-value=0.68  Score=42.49  Aligned_cols=33  Identities=9%  Similarity=0.039  Sum_probs=19.8

Q ss_pred             HHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC
Q 044563          178 LFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR  213 (290)
Q Consensus       178 l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~  213 (290)
                      +++...+.++..+++|||+-.   ...+-|++.+.+
T Consensus        27 ~l~~~~~~~~~~v~~TGRs~~---~~~~~~~~~~l~   59 (247)
T PF05116_consen   27 LLEQQARPEILFVYVTGRSLE---SVLRLLREYNLP   59 (247)
T ss_dssp             HHHHHHCCGEEEEEE-SS-HH---HHHHHHHHCT-E
T ss_pred             HHHHhhCCCceEEEECCCCHH---HHHHHHHhCCCC
Confidence            333455788999999999843   344556666765

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=88.22  E-value=0.65  Score=41.34  Aligned_cols=89  Identities=12%  Similarity=0.168  Sum_probs=56.2

Q ss_pred             EEEecccccccChhhhhhc--------------------cCCCCccchHHHHHhhcCcCcHH-----HHHHHHHHHhCCC
Q 044563          133 VLMDIDDIFASSSKYSNLL--------------------IDRVNVRGYIECIEEAKHLKHMF-----TLKLFMKLQVRGW  187 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~--------------------~G~~~~~~w~~Wv~~~~apaip~-----~l~l~~~l~~~Gv  187 (290)
                      .-+|||||+..-|++....                    .+.-..+.|.+|.+..++.--..     -++..=...+...
T Consensus         9 ~ciDIDGtit~~~t~~~~~n~~f~kslse~d~t~y~lhkil~i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~~   88 (194)
T COG5663           9 CCIDIDGTITDDPTFAPYLNPAFEKSLSEADPTDYDLHKILNITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEEH   88 (194)
T ss_pred             eeeccCCceecCcccchhccHHHHhhhhhcccccccHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Confidence            4589999776655433210                    01123356778887544332222     1112222334457


Q ss_pred             eEEEecCCCccchHHHHHHHHhCCCCCCCcceeec
Q 044563          188 PVILLSRKHEGQRNATTELLISAGYRGWSSLIMRL  222 (290)
Q Consensus       188 ~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~  222 (290)
                      ++||+|.|....-..|-+||.....| +++|.+-+
T Consensus        89 ~L~~itar~~dl~~iT~~~l~~q~ih-~~~l~i~g  122 (194)
T COG5663          89 RLIYITARKADLTRITYAWLFIQNIH-YDHLEIVG  122 (194)
T ss_pred             eeeeeehhhHHHHHHHHHHHHHhccc-hhhhhhhc
Confidence            89999999999999999999999986 77877654

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=88.12  E-value=1.1  Score=49.12  Aligned_cols=61  Identities=10%  Similarity=0.060  Sum_probs=40.0

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhC-CCeEEEecCCCcc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVR-GWPVILLSRKHEG  198 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e~  198 (290)
                      ++.+++||.||||....-         +|...-.-+..-.+.+-|+++++++.|.+. +..|++||||+..
T Consensus       590 ~~RLlfLDyDGTLap~~~---------~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~  651 (934)
T PLN03064        590 NNRLLILGFNATLTEPVD---------TPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRS  651 (934)
T ss_pred             cceEEEEecCceeccCCC---------CcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHH
Confidence            356899999998876411         111000001112345678899999999876 7899999999853

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=87.85  E-value=6.2  Score=35.82  Aligned_cols=91  Identities=11%  Similarity=-0.079  Sum_probs=59.6

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC-C------------C-CCCcceeecCcccCcchHHh
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG-Y------------R-GWSSLIMRLDNEMQMDSREY  233 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G-y------------~-~~d~LiLR~~~~~~~~~~~y  233 (290)
                      +..--|+-.+|+++++++++.++.||+--+.--.+-.+++.... .            + +|.+-++-+.++.-.   -.
T Consensus        71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG---~d  147 (220)
T COG4359          71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFG---HD  147 (220)
T ss_pred             hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccC---CC
Confidence            35556788899999999999999999987655444444443111 1            1 344445544332211   13


Q ss_pred             hHHHHHHHHhcCCeEEEEeCCCcccccCC
Q 044563          234 LSRRRTILQKEGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       234 Ks~~R~~i~~~GYrIv~~iGDq~sDl~G~  262 (290)
                      |+..-+++. +.|.=+.++||.-+|+...
T Consensus       148 K~~vI~~l~-e~~e~~fy~GDsvsDlsaa  175 (220)
T COG4359         148 KSSVIHELS-EPNESIFYCGDSVSDLSAA  175 (220)
T ss_pred             cchhHHHhh-cCCceEEEecCCcccccHh
Confidence            666666664 6678799999999999864

>PRK11590 hypothetical protein; Provisional

Probab=87.75  E-value=4.2  Score=36.01  Aligned_cols=103  Identities=11%  Similarity=-0.009  Sum_probs=60.3

Q ss_pred             CcCcHHHHHHH-HHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcce-----eecCcccCcchHHhhHHHHHHHH
Q 044563          169 HLKHMFTLKLF-MKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLI-----MRLDNEMQMDSREYLSRRRTILQ  242 (290)
Q Consensus       169 apaip~~l~l~-~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~Li-----LR~~~~~~~~~~~yKs~~R~~i~  242 (290)
                      ..+.|++.+++ +.+++.|++|+++|+.++   ..+...+...|+..-++++     .+-.+.- ....-+..+..+.|.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~---~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~-~g~~c~g~~K~~~l~  169 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQ---PLVEQVYFDTPWLPRVNLIASQMQRRYGGWV-LTLRCLGHEKVAQLE  169 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcH---HHHHHHHHHccccccCceEEEEEEEEEccEE-CCccCCChHHHHHHH
Confidence            45689999999 578889999999999874   5566677777742222332     1111100 011124444444444


Q ss_pred             h---cCCeEEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          243 K---EGFHITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       243 ~---~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      +   ..+...-.-||..+|+.=- ..++.+.+=|+|.
T Consensus       170 ~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~  206 (211)
T PRK11590        170 RKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGE  206 (211)
T ss_pred             HHhCCCcceEEEecCCcccHHHHHhCCCCEEECccHH
Confidence            3   2455555679999998632 2344455556653

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=87.37  E-value=0.86  Score=40.09  Aligned_cols=94  Identities=10%  Similarity=0.029  Sum_probs=56.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecC-cccCcchHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLD-NEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~-~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|   ++++.++||-+   ++.+..-|+..|+..+ +..+.-.. ....|+..+.-   ...+++-|-
T Consensus        87 ~~~~~gv~~~L~~L---~~~~~ivTn~~---~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~---~~a~~~~~~  157 (221)
T PRK10563         87 LEPIAGANALLESI---TVPMCVVSNGP---VSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALM---FHAAEAMNV  157 (221)
T ss_pred             CCcCCCHHHHHHHc---CCCEEEEeCCc---HHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHH---HHHHHHcCC
Confidence            56778888888877   59999999953   5567778888998655 23444322 12223222121   122333332


Q ss_pred             eE--EEEeCCCcccccCC-CCcceEEEc
Q 044563          247 HI--TGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       247 rI--v~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                      ..  +..|||.++|+.+. ..|-+++-+
T Consensus       158 ~p~~~l~igDs~~di~aA~~aG~~~i~~  185 (221)
T PRK10563        158 NVENCILVDDSSAGAQSGIAAGMEVFYF  185 (221)
T ss_pred             CHHHeEEEeCcHhhHHHHHHCCCEEEEE
Confidence            22  46799999999763 345555444

>PLN02382 probable sucrose-phosphatase

Probab=86.99  E-value=0.99  Score=44.81  Aligned_cols=47  Identities=6%  Similarity=0.072  Sum_probs=29.8

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      +..|+.|+||||.+...  .+   ..+.               +.--.+++++.++|+..++.|||+
T Consensus         9 ~~lI~sDLDGTLL~~~~--~~---~~s~---------------~~~~~l~~~~~~~gi~fv~aTGR~   55 (413)
T PLN02382          9 RLMIVSDLDHTMVDHHD--PE---NLSL---------------LRFNALWEAEYRHDSLLVFSTGRS   55 (413)
T ss_pred             CEEEEEcCCCcCcCCCC--cc---chhH---------------HHHHHHHHHhhcCCeeEEEEcCCC
Confidence            44899999998776410  00   0111               112234466888999999999997

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=86.21  E-value=0.6  Score=39.21  Aligned_cols=127  Identities=17%  Similarity=0.143  Sum_probs=63.3

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .+|||+||||-........   ..+.. ...=.....--.-|++.+|++.+ +..++|++.|...+..-...++.|...+
T Consensus         2 ~LVlDLD~TLv~~~~~~~~---~~~~~-~~~~~~~~~v~~RP~l~~FL~~l-~~~~ev~i~T~~~~~ya~~v~~~ldp~~   76 (159)
T PF03031_consen    2 TLVLDLDGTLVHSSSKSPL---PYDFK-IIDQRGGYYVKLRPGLDEFLEEL-SKHYEVVIWTSASEEYAEPVLDALDPNG   76 (159)
T ss_dssp             EEEEE-CTTTEEEESSTCT---T-SEE-EETEEEEEEEEE-TTHHHHHHHH-HHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred             EEEEeCCCcEEEEeecCCC---Ccccc-eeccccceeEeeCchHHHHHHHH-HHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence            6899999977765321100   00000 00000001122468999999999 5559999999999888777788887543


Q ss_pred             CCCCCcceeecCcccCcchHHhhHHHHHHHHhcC--CeEEEEeCCCcccccCCCCcceEEEcc
Q 044563          212 YRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEG--FHITGLISNQMDALIGQSLGKRVFKLP  272 (290)
Q Consensus       212 y~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G--YrIv~~iGDq~sDl~G~~~g~r~fkLP  272 (290)
                      - ..++.+.|.......... .|     .|..-|  ..=+..|+|...-+....  ...+..|
T Consensus        77 ~-~~~~~~~r~~~~~~~~~~-~K-----dL~~l~~~~~~vvivDD~~~~~~~~~--~N~i~v~  130 (159)
T PF03031_consen   77 K-LFSRRLYRDDCTFDKGSY-IK-----DLSKLGRDLDNVVIVDDSPRKWALQP--DNGIPVP  130 (159)
T ss_dssp             S-SEEEEEEGGGSEEETTEE-E-------GGGSSS-GGGEEEEES-GGGGTTSG--GGEEE--
T ss_pred             c-cccccccccccccccccc-cc-----chHHHhhccccEEEEeCCHHHeeccC--CceEEec
Confidence            2 124566664332111111 12     344334  244557788777655442  3345444

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=85.74  E-value=4  Score=35.55  Aligned_cols=102  Identities=14%  Similarity=0.157  Sum_probs=67.3

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      -++.|+++++++.++.+ +++.++||=   .+....+-|++.|+.+ ++.++.-......|+....-   ...++..|-.
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f---~~~~~~~g~~  170 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIF---EYALEKLGVP  170 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHH---HHHHHHcCCC
Confidence            68899999999999999 999999994   3567889999999654 45666554433333322222   2333444432


Q ss_pred             --EEEEeCCCcccc-cCC-CCcceEEEccCCccc
Q 044563          248 --ITGLISNQMDAL-IGQ-SLGKRVFKLPNPLYY  277 (290)
Q Consensus       248 --Iv~~iGDq~sDl-~G~-~~g~r~fkLPNPmY~  277 (290)
                        =+..|||+.... .|. ..|-+++-+..+.+.
T Consensus       171 p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~  204 (229)
T COG1011         171 PEEALFVGDSLENDILGARALGMKTVWINRGGKP  204 (229)
T ss_pred             cceEEEECCChhhhhHHHHhcCcEEEEECCCCCC
Confidence              367899977655 554 467777655555443

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=85.12  E-value=2.1  Score=40.95  Aligned_cols=71  Identities=14%  Similarity=0.244  Sum_probs=46.7

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      ..|.+||||+|+||-+...                    ..-.+-|.+.+-++.|++.|.-+++-|-=.+.   .-.+.|
T Consensus       120 ~~phVIVfDlD~TLItd~~--------------------~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~e---HV~~sl  176 (297)
T PF05152_consen  120 EPPHVIVFDLDSTLITDEG--------------------DVRIRDPAVYDSLRELKEQGCVLVLWSYGNRE---HVRHSL  176 (297)
T ss_pred             CCCcEEEEECCCcccccCC--------------------ccccCChHHHHHHHHHHHcCCEEEEecCCCHH---HHHHHH
Confidence            3456999999998876521                    01133466777888999999999999875544   444555


Q ss_pred             HhCCCCCCCcceee
Q 044563          208 ISAGYRGWSSLIMR  221 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR  221 (290)
                      ++.|..++=.+++-
T Consensus       177 ~~~~L~~~Fd~ii~  190 (297)
T PF05152_consen  177 KELKLEGYFDIIIC  190 (297)
T ss_pred             HHhCCccccEEEEe
Confidence            55555444345554

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=83.38  E-value=2.6  Score=45.34  Aligned_cols=55  Identities=11%  Similarity=0.094  Sum_probs=38.7

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhC-CCeEEEecCCCcc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVR-GWPVILLSRKHEG  198 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e~  198 (290)
                      ++.+++||.||||.....  .    .-+|         ..+.+-|+++++++.|.+. +..|++||||+..
T Consensus       506 ~~rll~LDyDGTL~~~~~--~----~~~p---------~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~  561 (797)
T PLN03063        506 NNRLLILGFYGTLTEPRN--S----QIKE---------MDLGLHPELKETLKALCSDPKTTVVVLSRSGKD  561 (797)
T ss_pred             cCeEEEEecCccccCCCC--C----cccc---------ccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHH
Confidence            356899999999883210  0    0011         2345678999999999876 7899999999743

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=82.18  E-value=6.1  Score=43.12  Aligned_cols=80  Identities=13%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.-|++....+.|++.|++++++||-..   .+-..-=+..|+.   ..+-  +- .    -+-|.+.=++|+++| .
T Consensus       721 ~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~---~aA~svA~~VGi~---~V~a--ev-~----P~~K~~~Ik~lq~~~-~  786 (951)
T KOG0207|consen  721 EDQVRPDAALAVAELKSMGIKVVMLTGDND---AAARSVAQQVGID---NVYA--EV-L----PEQKAEKIKEIQKNG-G  786 (951)
T ss_pred             ccccchhHHHHHHHHHhcCceEEEEcCCCH---HHHHHHHHhhCcc---eEEe--cc-C----chhhHHHHHHHHhcC-C
Confidence            567778888889999999999999999543   3333333455753   2221  11 0    124777778898877 7


Q ss_pred             EEEEeCCCcccccC
Q 044563          248 ITGLISNQMDALIG  261 (290)
Q Consensus       248 Iv~~iGDq~sDl~G  261 (290)
                      .++++||-.+|=..
T Consensus       787 ~VaMVGDGINDaPA  800 (951)
T KOG0207|consen  787 PVAMVGDGINDAPA  800 (951)
T ss_pred             cEEEEeCCCCccHH
Confidence            88899999998653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	290
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	4e-18
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	4e-17
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	2e-16

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A Length = 258

 Score = 80.8 bits (198), Expect = 4e-18
 Identities = 24/190 (12%), Positives = 61/190 (32%), Gaps = 24/190 (12%)

Query: 119 YFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLI--DRVNVRGYIECIEEAKHLKHMFTL 176
               L         +++D+D+    +S +  + +   +     + + I +A+      ++
Sbjct: 48  LDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSI 107

Query: 177 KLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSR 236
                 + +G  +  +S +   Q +AT + L   G    +   + L +  +         
Sbjct: 108 DFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKEKGKE----- 162

Query: 237 RRTILQKEGFHITGLISNQMDALIGQSL-----------------GKRVFKLPNPLYYSF 279
           +R  L  +   I     + +    G                    G++    PNP+Y  +
Sbjct: 163 KRRELVSQTHDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDW 222

Query: 280 DHHIESTKFP 289
           +  +    F 
Sbjct: 223 EGALYDYNFK 232

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A Length = 262

 Score = 78.1 bits (191), Expect = 4e-17
 Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 28/218 (12%)

Query: 95  LAIRYIKE-GQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLID 153
           L + ++++ G++      +    +  F+    +      V+ D+++    +S Y+   + 
Sbjct: 22  LGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKGKKKAVVADLNETMLDNSPYAGWQVQ 81

Query: 154 RV---NVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLS-RKHEGQRNATTELLIS 209
                + + +   ++  +       ++    +      V  ++ RK   +++ T + +  
Sbjct: 82  NNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR 141

Query: 210 AGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSL----- 264
            G+ G       L  +         + R   ++K+G+ I   + + +D            
Sbjct: 142 LGFNGVEESAFYLKKDK-----SAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNA 196

Query: 265 -------------GKRVFKLPNPLYYSFDHHIESTKFP 289
                        GK    LPN  Y  ++  +    F 
Sbjct: 197 DRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFK 234

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} Length = 260

 Score = 76.6 bits (187), Expect = 2e-16
 Identities = 26/213 (12%), Positives = 75/213 (35%), Gaps = 27/213 (12%)

Query: 99  YIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRV--- 155
             + G++A   + +    +  F+           V++D+D+    +S Y+   +      
Sbjct: 27  TQQSGEYAALAHQAFNSAKMAFDHAKAKKGKKKAVVVDLDETMIDNSAYAGWQVQSGQGF 86

Query: 156 NVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLS-RKHEGQRNATTELLISAGYRG 214
           + + + + ++  +       ++    +   G  +  +S R+ + ++  T + +   G+ G
Sbjct: 87  SPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTG 146

Query: 215 WSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSL---------- 264
            +   + L  +         S R   ++  G+ I   + + ++     +           
Sbjct: 147 VNDKTLLLKKDKSNK-----SVRFKQVEDMGYDIVLFVGDNLNDFGDATYKKSNAERRDF 201

Query: 265 --------GKRVFKLPNPLYYSFDHHIESTKFP 289
                   GK+   LPN  Y  ++  ++   F 
Sbjct: 202 VAKNSKAFGKKFIVLPNTQYGDWEGGLDKNYFK 234

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	290
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	100.0
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	100.0
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.98
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.93
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.74
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.56
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.47
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.4
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.39
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.37
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.29
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.22
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.15
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.15
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.14
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.14
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.13
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.13
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.13
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.12
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	98.11
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.11
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	98.11
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.1
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.09
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.08
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.06
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.05
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.04
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.03
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.99
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.97
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	97.96
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	97.96
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	97.92
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	97.91
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	97.91
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	97.9
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	97.89
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	97.89
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	97.88
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	97.88
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	97.85
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.85
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	97.85
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.84
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.82
3mmz_A	176	Putative HAD family hydrolase; structural genomics	97.82
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	97.81
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.81
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	97.81
2hsz_A	243	Novel predicted phosphatase; structural genomics,	97.8
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	97.79
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.79
1te2_A	226	Putative phosphatase; structural genomics, phospha	97.78
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.77
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	97.76
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	97.75
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	97.75
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.73
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	97.72
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.7
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	97.7
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	97.68
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	97.68
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	97.67
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	97.65
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	97.63
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.62
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	97.61
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.61
3mn1_A	189	Probable YRBI family phosphatase; structural genom	97.6
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	97.59
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.54
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	97.53
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	97.53
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	97.53
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.51
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	97.5
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	97.5
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	97.5
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.47
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.44
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	97.42
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	97.42
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	97.41
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.41
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	97.4
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	97.38
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	97.34
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	97.34
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	97.3
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	97.3
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.27
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.24
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.22
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.17
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.13
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	97.12
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.11
2zg6_A	220	Putative uncharacterized protein ST2620, probable	97.04
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	97.02
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.02
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.01
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	97.01
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.0
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	96.95
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	96.95
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	96.95
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	96.93
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.92
3dao_A	283	Putative phosphatse; structural genomics, joint ce	96.91
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	96.89
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	96.86
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	96.79
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	96.78
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.77
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	96.76
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	96.7
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	96.65
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.54
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	96.53
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.53
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.4
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.38
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.37
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.16
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	96.05
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	95.94
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	95.6
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.45
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	95.45
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	95.44
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	95.43
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	95.26
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	94.97
4gxt_A	385	A conserved functionally unknown protein; structur	94.94
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	94.63
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	94.41
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	92.96
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	93.86
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	93.82
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	93.82
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	93.77
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	93.76
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	93.65
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	93.34
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	93.2
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	93.17
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	93.1
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	92.9
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	92.54
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	92.36
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	92.31
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	90.17
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	89.06
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	88.74
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	83.81

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=100.00  E-value=5.4e-47  Score=349.40  Aligned_cols=188  Identities=11%  Similarity=0.193  Sum_probs=172.2

Q ss_pred             hhhHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhCCCCCCCcEEEEeccc-ccccChhhhhhccC--CCCccchHHHHHhh
Q 044563           91 ICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDD-IFASSSKYSNLLID--RVNVRGYIECIEEA  167 (290)
Q Consensus        91 ~C~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~~~~~g~~AvVfDIDe-tLsn~~y~~~~~~G--~~~~~~w~~Wv~~~  167 (290)
                      +-+-.+.||++|++|++++.++++.|+.|+++....+++|+|||||||| +|+|.+||..+..+  .|+++.|++|+..+
T Consensus        19 ~~~~a~~w~q~S~Ey~al~~q~yn~A~~~ld~~~~~~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~   98 (262)
T 3ocu_A           19 QAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDAR   98 (262)
T ss_dssp             TTHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCTTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcC
Confidence            4456799999999999999999999999999987777889999999999 77777888776533  49999999999999


Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCcc-chHHHHHHHHhCCCCCCC--cceeecCcccCcchHHhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEG-QRNATTELLISAGYRGWS--SLIMRLDNEMQMDSREYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~-~r~~T~~NL~~~Gy~~~d--~LiLR~~~~~~~~~~~yKs~~R~~i~~~  244 (290)
                      .++++||+++|++.|+++|++|+|||||++. +|+.|++||+++|++.|+  +|+||+..       .+|+.+|++|+++
T Consensus        99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-------~~K~~~r~~l~~~  171 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK-------SAKAARFAEIEKQ  171 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC-------SCCHHHHHHHHHT
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC-------CChHHHHHHHHhc
Confidence            9999999999999999999999999999998 999999999999999988  99999653       3799999999999


Q ss_pred             CCeEEEEeCCCcccccCCC------------------CcceEEEccCCccccccccccc
Q 044563          245 GFHITGLISNQMDALIGQS------------------LGKRVFKLPNPLYYSFDHHIES  285 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~~------------------~g~r~fkLPNPmY~~we~~~~~  285 (290)
                      ||+|+++|||||+||.|.+                  +|.++|+|||||||+||+.+-.
T Consensus       172 Gy~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~YG~we~~~~~  230 (262)
T 3ocu_A          172 GYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAE  230 (262)
T ss_dssp             TEEEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCSSCSHHHHTTST
T ss_pred             CCCEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCccchhHHhcC
Confidence            9999999999999999965                  7999999999999999998743

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=100.00  E-value=1.4e-46  Score=346.24  Aligned_cols=189  Identities=13%  Similarity=0.252  Sum_probs=167.2

Q ss_pred             hhhHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhCCCCCCCcEEEEeccc-ccccChhhhhhccC--CCCccchHHHHHhh
Q 044563           91 ICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDD-IFASSSKYSNLLID--RVNVRGYIECIEEA  167 (290)
Q Consensus        91 ~C~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~~~~~g~~AvVfDIDe-tLsn~~y~~~~~~G--~~~~~~w~~Wv~~~  167 (290)
                      +-...+.+|++|++|++|+.++++.|+.|+++.....+.+||||||||| +|+|.+|+..++.+  .|+++.|++|+..+
T Consensus        19 ~~~~a~~w~q~S~ey~a~~~q~~~~A~~~l~~~~~~~g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g   98 (260)
T 3pct_A           19 QVAMGLIWTQQSGEYAALAHQAFNSAKMAFDHAKAKKGKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDAR   98 (260)
T ss_dssp             TTHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC-----CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcC
Confidence            3356799999999999999999999999999876554556799999999 77788888766533  49999999999999


Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCcc-chHHHHHHHHhCCCCCCC--cceeecCcccCcchHHhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEG-QRNATTELLISAGYRGWS--SLIMRLDNEMQMDSREYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~-~r~~T~~NL~~~Gy~~~d--~LiLR~~~~~~~~~~~yKs~~R~~i~~~  244 (290)
                      .++++|++++|++.|+++|++|+|||||++. +|+.|++||+++|++.|+  +|+||+..       .+|+.+|++|+++
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-------~~K~~~r~~L~~~  171 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-------SNKSVRFKQVEDM  171 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC-------SSSHHHHHHHHTT
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC-------CChHHHHHHHHhc
Confidence            9999999999999999999999999999998 999999999999999887  79999642       3899999999988


Q ss_pred             CCeEEEEeCCCcccccCCC------------------CcceEEEccCCcccccccccccc
Q 044563          245 GFHITGLISNQMDALIGQS------------------LGKRVFKLPNPLYYSFDHHIEST  286 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~~------------------~g~r~fkLPNPmY~~we~~~~~~  286 (290)
                      ||+|+++|||||+||.+++                  +|.|+|+|||||||+||+.+-.-
T Consensus       172 gy~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~YG~we~~~~~~  231 (260)
T 3pct_A          172 GYDIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQYGDWEGGLDKN  231 (260)
T ss_dssp             TCEEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCSCSHHHHTTCTT
T ss_pred             CCCEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCcchhhHHhcCC
Confidence            9999999999999999854                  79999999999999999987443

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.98  E-value=1.2e-32  Score=251.78  Aligned_cols=189  Identities=13%  Similarity=0.197  Sum_probs=162.1

Q ss_pred             CchhhhHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhC-CCCCCCcEEEEeccc-ccccChhhhhhccC--CCCccchHHH
Q 044563           88 LPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLT-PSYNGLDVVLMDIDD-IFASSSKYSNLLID--RVNVRGYIEC  163 (290)
Q Consensus        88 vP~~C~~~v~~Y~~sgqY~~D~~~v~~~A~~y~~~~~-~~~~g~~AvVfDIDe-tLsn~~y~~~~~~G--~~~~~~w~~W  163 (290)
                      +.++-...+.+|++|++|++|+.++++.|+.++++.. ..++++++||||||| ++++.+|+..+..+  .| ++.|++|
T Consensus        16 ~~~~~~~~~~~~~~s~ey~a~~~q~y~~a~~~~~~~~~~~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~   94 (258)
T 2i33_A           16 LTDQQLMADLWYQTAGEMKALYYQGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDW   94 (258)
T ss_dssp             GGGGGHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHH
T ss_pred             HhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHH
Confidence            4445567899999999999999999999999999763 446778899999999 55555776654422  37 7889999


Q ss_pred             HHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC--CCCcceeecCcccCcchHHhhHHHHHHH
Q 044563          164 IEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR--GWSSLIMRLDNEMQMDSREYLSRRRTIL  241 (290)
Q Consensus       164 v~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~--~~d~LiLR~~~~~~~~~~~yKs~~R~~i  241 (290)
                      +..+..+++|++.+++++|+++|++|+++|||++..+..|.++|...|++  .++.+++++++.       +|...|..+
T Consensus        95 ~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-------~K~~~~~~~  167 (258)
T 2i33_A           95 INKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-------KGKEKRREL  167 (258)
T ss_dssp             HHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC-------CSSHHHHHH
T ss_pred             HHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC-------CCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999998  788899986542       444556667


Q ss_pred             HhcCCeEEEEeCCCcccccCCC-----------------CcceEEEccCCcccccccccc
Q 044563          242 QKEGFHITGLISNQMDALIGQS-----------------LGKRVFKLPNPLYYSFDHHIE  284 (290)
Q Consensus       242 ~~~GYrIv~~iGDq~sDl~G~~-----------------~g~r~fkLPNPmY~~we~~~~  284 (290)
                      ++.|++++++|||++.|+.+..                 +|.++|+||||||+.||+.+-
T Consensus       168 ~~~~~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~~~~~  227 (258)
T 2i33_A          168 VSQTHDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWEGALY  227 (258)
T ss_dssp             HHHHEEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHHHHHT
T ss_pred             HHhCCCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhhhhhc
Confidence            7789999999999999999983                 699999999999999999874

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.93  E-value=1e-08  Score=92.84  Aligned_cols=128  Identities=12%  Similarity=0.132  Sum_probs=96.1

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      +..+++|+|++++....        ..+..|+   .....++.|++.++++.|+++|++++++|||++..+..|.++|..
T Consensus       159 ~~~i~iD~dgtl~~~~~--------~~~~~~~---~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~  227 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNG--------RGPYDLE---KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM  227 (301)
T ss_dssp             CEEEEEETBTTTBCCSS--------CCTTCGG---GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred             cceEEEeCCCCcccccC--------CCchhhh---hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHh
Confidence            46899999998877521        2233354   455788999999999999999999999999999888889999999


Q ss_pred             --------CCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEE
Q 044563          210 --------AGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFK  270 (290)
Q Consensus       210 --------~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fk  270 (290)
                              .|+ .++.+++++... .+.....|....+++....+++..+|||...|+... ..|-+++-
T Consensus       228 ~~~~~~~~~~~-~~~~~~~~~~~~-~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~  295 (301)
T 1ltq_A          228 TRKWVEDIAGV-PLVMQCQREQGD-TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQ  295 (301)
T ss_dssp             HHHHHHHTTCC-CCSEEEECCTTC-CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEE
T ss_pred             cccccccccCC-CchheeeccCCC-CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEE
Confidence                    899 488888887654 344455565555556545678777799999999754 23544443

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.74  E-value=3.7e-08  Score=83.58  Aligned_cols=136  Identities=15%  Similarity=0.182  Sum_probs=88.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+....      .|.......|   ...++.|++.++++.|+++|++++++||++...+......|+.
T Consensus         3 ik~vifD~DgtL~~~~~~------~y~~~~~~~~---~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~   73 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNT------RYDHHPLDTY---PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN   73 (189)
T ss_dssp             CCEEEECTBTTTBCCCTT------SSCSSCGGGC---TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             ceEEEEcCCCceeeccch------hhhhHHHhcc---CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh
Confidence            359999999988663210      0111112121   2467899999999999999999999999998888899999999


Q ss_pred             CCCCCC-CcceeecCc----ccCcc-hHHhhHHHHHHHHhcCCeEEEEeCCC-cccccCC-CCcceEEEccCCcc
Q 044563          210 AGYRGW-SSLIMRLDN----EMQMD-SREYLSRRRTILQKEGFHITGLISNQ-MDALIGQ-SLGKRVFKLPNPLY  276 (290)
Q Consensus       210 ~Gy~~~-d~LiLR~~~----~~~~~-~~~yKs~~R~~i~~~GYrIv~~iGDq-~sDl~G~-~~g~r~fkLPNPmY  276 (290)
                      .|+..+ +.++-..+.    ..+|. .-.|+... +++--..-+ +..|||. ..|+.+. ..|-+++-++++-.
T Consensus        74 ~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~-~~~~~~~~~-~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~  146 (189)
T 3ib6_A           74 FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTL-NALQIDKTE-AVMVGNTFESDIIGANRAGIHAIWLQNPEV  146 (189)
T ss_dssp             TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHH-HHHTCCGGG-EEEEESBTTTTHHHHHHTTCEEEEECCTTT
T ss_pred             cCchhheEEEEEccccccccCCCCcCHHHHHHHH-HHcCCCccc-EEEECCCcHHHHHHHHHCCCeEEEECCccc
Confidence            998654 344433221    12232 22233222 222111123 5689999 5999865 35778888887654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.56  E-value=6.9e-08  Score=81.59  Aligned_cols=131  Identities=14%  Similarity=0.081  Sum_probs=80.1

Q ss_pred             CcEEEEecccccccChhhhhhccCC-----CCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHH
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDR-----VNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATT  204 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~-----~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~  204 (290)
                      +++|+||+||||-......  ..|.     +...-++.+  ....++.|++.++++.|+++|++++++|||+.  +..+.
T Consensus        27 ~k~vifDlDGTL~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~--~~~~~  100 (187)
T 2wm8_A           27 PKLAVFDLDYTLWPFWVDT--HVDPPFHKSSDGTVRDRR--GQDVRLYPEVPEVLKRLQSLGVPGAAASRTSE--IEGAN  100 (187)
T ss_dssp             CSEEEECSBTTTBSSCTTT--SSCSCCEECTTSCEECTT--CCEECCCTTHHHHHHHHHHHTCCEEEEECCSC--HHHHH
T ss_pred             cCEEEEcCCCCcchHHHhh--ccCcchhhhcccchhhcc--CcccCcchhHHHHHHHHHHCCceEEEEeCCCC--hHHHH
Confidence            4699999999885432111  1111     111111111  12457889999999999999999999999974  45677


Q ss_pred             HHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC--eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          205 ELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF--HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       205 ~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY--rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      ..|+..|+..+ +..+..+..    +...|+    ..+++.|.  .=+..|||...|+.+. ..|-+++.++++
T Consensus       101 ~~l~~~gl~~~f~~~~~~~~~----k~~~~~----~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g  166 (187)
T 2wm8_A          101 QLLELFDLFRYFVHREIYPGS----KITHFE----RLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNG  166 (187)
T ss_dssp             HHHHHTTCTTTEEEEEESSSC----HHHHHH----HHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSS
T ss_pred             HHHHHcCcHhhcceeEEEeCc----hHHHHH----HHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCC
Confidence            78888998653 333232211    111122    22233232  2255899999999754 457777777764

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.47  E-value=2e-07  Score=78.14  Aligned_cols=65  Identities=15%  Similarity=0.113  Sum_probs=54.0

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      ..+|+||+||||.+..+         ..          ..+.+|++++.++.|+++|+.|++.|||+......+.++|.+
T Consensus         3 ~k~i~~DlDGTL~~~~~---------~~----------i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~   63 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRY---------PR----------IGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA   63 (142)
T ss_dssp             CCEEEECCBTTTBCSCT---------TS----------CCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             CeEEEEECcCCCCCCCC---------cc----------ccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence            45899999998888421         00          113467899999999999999999999998888899999999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        64 ~gi~   67 (142)
T 2obb_A           64 RGLE   67 (142)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            9996

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.40  E-value=7.3e-07  Score=77.84  Aligned_cols=137  Identities=12%  Similarity=0.106  Sum_probs=78.8

Q ss_pred             CCcEEEEecccccccC-hhhh--hhccC----C--CCccchHHHHHh--hcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          129 GLDVVLMDIDDIFASS-SKYS--NLLID----R--VNVRGYIECIEE--AKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       129 g~~AvVfDIDetLsn~-~y~~--~~~~G----~--~~~~~w~~Wv~~--~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ..++|+||+||||-++ +.+.  ...+.    .  .+...|.++...  ....+.|++.++++.|+++|++++++|||+.
T Consensus        36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~  115 (211)
T 2b82_A           36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP  115 (211)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred             CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence            3579999999966664 3221  11110    0  122334443321  1234578999999999999999999999987


Q ss_pred             cchHHHHHHHHhC-CCC--CCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          198 GQRNATTELLISA-GYR--GWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       198 ~~r~~T~~NL~~~-Gy~--~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .......+.|... ++.  +.+.......   .++...|    ++.+++.|.  ..+|||...|+.+. ..|-+++-+..
T Consensus       116 ~~~~~~l~~l~~~f~~i~~~~~~~~~~~~---KP~p~~~----~~~~~~~g~--~l~VGDs~~Di~aA~~aG~~~i~v~~  186 (211)
T 2b82_A          116 TKTETVSKTLADNFHIPATNMNPVIFAGD---KPGQNTK----SQWLQDKNI--RIFYGDSDNDITAARDVGARGIRILR  186 (211)
T ss_dssp             CSSCCHHHHHHHHTTCCTTTBCCCEECCC---CTTCCCS----HHHHHHTTE--EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             HHHHHHHHHHHHhcCccccccchhhhcCC---CCCHHHH----HHHHHHCCC--EEEEECCHHHHHHHHHCCCeEEEEec
Confidence            6655555655432 221  1111111110   1111112    223444454  88999999999875 35777777765


Q ss_pred             C
Q 044563          274 P  274 (290)
Q Consensus       274 P  274 (290)
                      .
T Consensus       187 g  187 (211)
T 2b82_A          187 A  187 (211)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.39  E-value=5.7e-07  Score=70.44  Aligned_cols=113  Identities=9%  Similarity=0.080  Sum_probs=68.5

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++++||+||||...                        .++.|++.++++.|+++|++++++||++....   .+.|+.
T Consensus         2 ~k~i~~D~DgtL~~~------------------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~---~~~l~~   54 (137)
T 2pr7_A            2 MRGLIVDYAGVLDGT------------------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLG---AAPIRE   54 (137)
T ss_dssp             CCEEEECSTTTTSSC------------------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGG---GHHHHH
T ss_pred             CcEEEEeccceecCC------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH
Confidence            368999999988221                        13568999999999999999999999976543   334455


Q ss_pred             CCCCC-CCcceeecCcccCcchHHhhHHHHHHHHhcCCe--EEEEeCCCcccccCCC-CcceEEEcc
Q 044563          210 AGYRG-WSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH--ITGLISNQMDALIGQS-LGKRVFKLP  272 (290)
Q Consensus       210 ~Gy~~-~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr--Iv~~iGDq~sDl~G~~-~g~r~fkLP  272 (290)
                      .|+.. ++.++...+...+++...   ..+..+++.|..  =+..|||...|+.+.. .|-+++-..
T Consensus        55 ~~l~~~f~~i~~~~~~~~~Kp~~~---~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~  118 (137)
T 2pr7_A           55 LETNGVVDKVLLSGELGVEKPEEA---AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ  118 (137)
T ss_dssp             HHHTTSSSEEEEHHHHSCCTTSHH---HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             CChHhhccEEEEeccCCCCCCCHH---HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeC
Confidence            55433 344443322122222111   122233333432  2457999999987642 355555443

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.37  E-value=8.2e-07  Score=76.72  Aligned_cols=126  Identities=8%  Similarity=0.090  Sum_probs=79.3

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc----------
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ----------  199 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~----------  199 (290)
                      .++++||+||||.+...|.        . .+      ...++.|++.+++++|+++|++++++||++...          
T Consensus        25 ~k~v~~D~DGTL~~~~~~~--------~-~~------~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~   89 (211)
T 2gmw_A           25 VPAIFLDRDGTINVDHGYV--------H-EI------DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFE   89 (211)
T ss_dssp             BCEEEECSBTTTBCCCSSC--------C-SG------GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHH
T ss_pred             CCEEEEcCCCCeECCCCcc--------c-Cc------ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHH
Confidence            4699999999877653221        1 01      245778999999999999999999999998422          


Q ss_pred             --hHHHHHHHHhCCCCCCCcceeecCc------------ccCcc-hHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-C
Q 044563          200 --RNATTELLISAGYRGWSSLIMRLDN------------EMQMD-SREYLSRRRTILQKEGFHITGLISNQMDALIGQ-S  263 (290)
Q Consensus       200 --r~~T~~NL~~~Gy~~~d~LiLR~~~------------~~~~~-~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~  263 (290)
                        +....+.|++.|+. ++..+.-+..            ..+|+ ...|+... +++--..-+ +..|||..+|+.+. .
T Consensus        90 ~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~-~~lgi~~~~-~~~VGD~~~Di~~a~~  166 (211)
T 2gmw_A           90 TLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSAR-DYLHIDMAA-SYMVGDKLEDMQAAVA  166 (211)
T ss_dssp             HHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHH-HHHTBCGGG-CEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCc-eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHH-HHcCCCHHH-EEEEcCCHHHHHHHHH
Confidence              35667788899986 6665543211            11222 22233222 222111123 45899999999764 3


Q ss_pred             CcceE-EEccC
Q 044563          264 LGKRV-FKLPN  273 (290)
Q Consensus       264 ~g~r~-fkLPN  273 (290)
                      .|-++ +-+.+
T Consensus       167 aG~~~~i~v~~  177 (211)
T 2gmw_A          167 ANVGTKVLVRT  177 (211)
T ss_dssp             TTCSEEEEESS
T ss_pred             CCCceEEEEec
Confidence            56666 55543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.29  E-value=2.6e-06  Score=70.26  Aligned_cols=101  Identities=13%  Similarity=0.158  Sum_probs=66.4

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.+++.|++++++|+.+   +......|+..|+..+ +.++........++ ...|    +..++..|.
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~----~~~~~~~~~  160 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSV---KADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIY----LTALKQLNV  160 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHH----HHHHHHHTC
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCc---HHHHHHHHHHcCcHhheeeEeecccccCCCCChHHH----HHHHHHcCC
Confidence            3688999999999999999999999985   4566677888887643 44443322222222 2222    223333343


Q ss_pred             e--EEEEeCCCcccccCC-CCcceEEEccCCcc
Q 044563          247 H--ITGLISNQMDALIGQ-SLGKRVFKLPNPLY  276 (290)
Q Consensus       247 r--Iv~~iGDq~sDl~G~-~~g~r~fkLPNPmY  276 (290)
                      .  =+..|||..+|+.+. ..|-+++.+.++.+
T Consensus       161 ~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~  193 (214)
T 3e58_A          161 QASRALIIEDSEKGIAAGVAADVEVWAIRDNEF  193 (214)
T ss_dssp             CGGGEEEEECSHHHHHHHHHTTCEEEEECCSSS
T ss_pred             ChHHeEEEeccHhhHHHHHHCCCEEEEECCCCc
Confidence            2  256899999999864 35667777776543

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.15  E-value=1.7e-06  Score=73.01  Aligned_cols=133  Identities=11%  Similarity=0.153  Sum_probs=80.4

Q ss_pred             CCCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc--------
Q 044563          127 YNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG--------  198 (290)
Q Consensus       127 ~~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~--------  198 (290)
                      +++.++++||+||||-+....      .|....+      ...++.|++.++++.|+++|++++++||....        
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~------~~~~~~~------~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~   78 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPS------DFQVDRF------DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQA   78 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC--------CCCCCSG------GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHH
T ss_pred             CCcCcEEEEeCCCCeEcCCCC------CcCcCCH------HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchH
Confidence            456789999999977765310      1111112      13467899999999999999999999997421        


Q ss_pred             ----chHHHHHHHHhCCCCCCCcceee-----cCcccCc-chHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcce
Q 044563          199 ----QRNATTELLISAGYRGWSSLIMR-----LDNEMQM-DSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKR  267 (290)
Q Consensus       199 ----~r~~T~~NL~~~Gy~~~d~LiLR-----~~~~~~~-~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r  267 (290)
                          .+.....-|+..|+. ++.++.-     .+...+| +.-.|....+ ++--..-+ +.+|||...|+.+. ..|-+
T Consensus        79 ~~~~~~~~~~~~l~~~gl~-fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~-~~gi~~~~-~l~VGD~~~Di~~A~~aG~~  155 (176)
T 2fpr_A           79 DFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECDCRKPKVKLVERYLA-EQAMDRAN-SYVIGDRATDIQLAENMGIN  155 (176)
T ss_dssp             HHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCSSSTTSCGGGGGGC-----CCGGG-CEEEESSHHHHHHHHHHTSE
T ss_pred             hhhhhHHHHHHHHHHcCCC-eeEEEEcCCCCcccccccCCCHHHHHHHHH-HcCCCHHH-EEEEcCCHHHHHHHHHcCCe
Confidence                356677788899986 6666553     1111122 1222332211 11111123 45899999999764 34666


Q ss_pred             EEEccCC
Q 044563          268 VFKLPNP  274 (290)
Q Consensus       268 ~fkLPNP  274 (290)
                      ++.+...
T Consensus       156 ~i~v~~~  162 (176)
T 2fpr_A          156 GLRYDRE  162 (176)
T ss_dssp             EEECBTT
T ss_pred             EEEEcCC
Confidence            6666544

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.15  E-value=8.6e-06  Score=69.79  Aligned_cols=100  Identities=16%  Similarity=0.125  Sum_probs=63.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++|++++++||++   +......|+..|+..+ +.++-......+++. ..|+.    .++..|
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~----~~~~~~  175 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGN---DEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQF----ACDRLG  175 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHH----HHHHHT
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHH----HHHHcC
Confidence            45678999999999999999999999986   3456677888887644 444433222222222 22322    222333


Q ss_pred             Ce--EEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FH--ITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Yr--Iv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      ..  =+..|||..+|+.+. ..|-+++-++.+
T Consensus       176 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~  207 (240)
T 2no4_A          176 VNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ  207 (240)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCEEEEECTT
T ss_pred             CCcccEEEEeCCHHHHHHHHHCCCEEEEECCC
Confidence            21  244779999999864 346666665543

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.14  E-value=1.3e-05  Score=68.24  Aligned_cols=101  Identities=13%  Similarity=0.041  Sum_probs=62.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC---CCcce-------eecCcccC-cchHHhhHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG---WSSLI-------MRLDNEMQ-MDSREYLSR  236 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~---~d~Li-------LR~~~~~~-~~~~~yKs~  236 (290)
                      ..++.|++.++++.|+++|+++.++||.+   +..+...|+..|+..   .+..+       +-+.+... .....-|..
T Consensus        84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~---~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~  160 (225)
T 1nnl_A           84 PPHLTPGIRELVSRLQERNVQVFLISGGF---RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGK  160 (225)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHH
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEEeCCh---HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHH
Confidence            46789999999999999999999999976   456677888889852   11111       01111100 000012333


Q ss_pred             HHHH-HHhcCCeEEEEeCCCcccccCCC-CcceEEEcc
Q 044563          237 RRTI-LQKEGFHITGLISNQMDALIGQS-LGKRVFKLP  272 (290)
Q Consensus       237 ~R~~-i~~~GYrIv~~iGDq~sDl~G~~-~g~r~fkLP  272 (290)
                      .-++ ++..|..=+..|||..+|+.+.. .|- .+-+.
T Consensus       161 ~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~-~i~~~  197 (225)
T 1nnl_A          161 VIKLLKEKFHFKKIIMIGDGATDMEACPPADA-FIGFG  197 (225)
T ss_dssp             HHHHHHHHHCCSCEEEEESSHHHHTTTTTSSE-EEEEC
T ss_pred             HHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCe-EEEec
Confidence            2222 23335444679999999998764 454 55443

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=98.14  E-value=6.6e-06  Score=69.38  Aligned_cols=97  Identities=8%  Similarity=-0.002  Sum_probs=62.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.|+++|+++.++||.+   +..+...|+..|...+ +..+.......+|+ .-.|....+ ++--..
T Consensus        82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~---~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~-~lg~~p  157 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKRIKLALATSTP---QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLE-RLNVVP  157 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHH-HHTCCG
T ss_pred             hcccCccHHHHHHHHHHcCCCcccccCCc---HHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHH-hhCCCc
Confidence            45789999999999999999999999965   5566778888887654 44443332222232 223433222 221122


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEE
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~f  269 (290)
                      -++ ..|||...|+.+. ..|-+++
T Consensus       158 ~e~-l~VgDs~~Di~aA~~aG~~~i  181 (216)
T 3kbb_A          158 EKV-VVFEDSKSGVEAAKSAGIERI  181 (216)
T ss_dssp             GGE-EEEECSHHHHHHHHHTTCCCE
T ss_pred             cce-EEEecCHHHHHHHHHcCCcEE
Confidence            334 4799999999864 2455554

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.13  E-value=1.9e-05  Score=67.23  Aligned_cols=102  Identities=15%  Similarity=0.064  Sum_probs=61.8

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC--Ccceeec-----CcccCcchHHhhHHHH-HHH
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW--SSLIMRL-----DNEMQMDSREYLSRRR-TIL  241 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~--d~LiLR~-----~~~~~~~~~~yKs~~R-~~i  241 (290)
                      ...|++.++++.|+++|+++.++||..   +..+...|+..|+..+  ..+....     .-........-|...- +.+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~  168 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATN---SFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL  168 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence            569999999999999999999999976   5566777888898522  1111110     0000000011233222 233


Q ss_pred             HhcC-----CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          242 QKEG-----FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       242 ~~~G-----YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      +..|     ..=+..+||..+|+... ..|..+..-|+|
T Consensus       169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~  207 (232)
T 3fvv_A          169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSP  207 (232)
T ss_dssp             HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCH
T ss_pred             HHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCH
Confidence            3345     44567899999999754 245555555554

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.13  E-value=9.2e-06  Score=68.93  Aligned_cols=99  Identities=15%  Similarity=0.117  Sum_probs=62.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++|++++++|+++.   ..+...|+..|+..+ +.++-......+++. ..|+.    .++..|
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~----~~~~~~  165 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSP---QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYEL----AEQALG  165 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHH----HHHHHT
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHH----HHHHcC
Confidence            346789999999999999999999999863   456677888887543 444433222223322 22322    222333


Q ss_pred             Ce--EEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 FH--ITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 Yr--Iv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      ..  =+..|||..+|+.+. ..|-+++.++.
T Consensus       166 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  196 (232)
T 1zrn_A          166 LDRSAILFVASNAWDATGARYFGFPTCWINR  196 (232)
T ss_dssp             SCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred             CCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence            22  244679999999764 24556666544

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.13  E-value=5.7e-06  Score=69.38  Aligned_cols=102  Identities=14%  Similarity=0.065  Sum_probs=66.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC--cceeecCcccCcchHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS--SLIMRLDNEMQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d--~LiLR~~~~~~~~~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.++++|++++++|+.+   +..+...|+..|+..+-  ..++-.+...+++.   ....+..++..|
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~---~~~~~~~~~~~g  141 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNA---RELAHVTLEAIGLADCFAEADVLGRDEAPPKPH---PGGLLKLAEAWD  141 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTS---SHHHHHHHHHTT
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCc---hHHHHHHHHHcCchhhcCcceEEeCCCCCCCCC---HHHHHHHHHHcC
Confidence            45789999999999999999999999986   45667788888975432  33332222222221   112233344444


Q ss_pred             C--eEEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          246 F--HITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      .  .=+..|||..+|+.+. ..|-+++-+.|..
T Consensus       142 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~  174 (205)
T 3m9l_A          142 VSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPD  174 (205)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEECSSSS
T ss_pred             CCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCC
Confidence            3  2257899999999864 3466677777653

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.12  E-value=2.5e-06  Score=73.62  Aligned_cols=123  Identities=13%  Similarity=0.189  Sum_probs=75.8

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc---------
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ---------  199 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~---------  199 (290)
                      ..++++||+||||.+...|..      +   +      ....+.|++.++++.|+++|++|+++||++...         
T Consensus        30 ~~k~i~~D~DGtl~~~~~y~~------~---~------~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~   94 (218)
T 2o2x_A           30 HLPALFLDRDGTINVDTDYPS------D---P------AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAF   94 (218)
T ss_dssp             SCCCEEECSBTTTBCCCSCTT------C---G------GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHH
T ss_pred             cCCEEEEeCCCCcCCCCcccC------C---c------ccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHH
Confidence            457999999997766422211      0   1      235678999999999999999999999997521         


Q ss_pred             ---hHHHHHHHHhCCCCCCCcceeec------------CcccCcc-hHHhhHHHHHHHHhcCC--eEEEEeCCCcccccC
Q 044563          200 ---RNATTELLISAGYRGWSSLIMRL------------DNEMQMD-SREYLSRRRTILQKEGF--HITGLISNQMDALIG  261 (290)
Q Consensus       200 ---r~~T~~NL~~~Gy~~~d~LiLR~------------~~~~~~~-~~~yKs~~R~~i~~~GY--rIv~~iGDq~sDl~G  261 (290)
                         .....+-|+..|+. .+..+.-.            ....+++ ...|+..    ++..|.  .=+..|||+.+|+.+
T Consensus        95 ~~~~~~~~~~l~~~gl~-~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~----~~~~~i~~~~~~~VGD~~~Di~~  169 (218)
T 2o2x_A           95 AAVNGRVLELLREEGVF-VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEA----GKRLALDLQRSLIVGDKLADMQA  169 (218)
T ss_dssp             HHHHHHHHHHHHHTTCC-CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHH----HHHHTCCGGGCEEEESSHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCc-eeeEEEeecCCCCceeecccCCccCCCCHHHHHHH----HHHcCCCHHHEEEEeCCHHHHHH
Confidence               14667778889974 44433221            1111221 2223322    222232  114689999999986


Q ss_pred             C-CCcceE-EEc
Q 044563          262 Q-SLGKRV-FKL  271 (290)
Q Consensus       262 ~-~~g~r~-fkL  271 (290)
                      . ..|-++ +.+
T Consensus       170 a~~aG~~~~i~v  181 (218)
T 2o2x_A          170 GKRAGLAQGWLV  181 (218)
T ss_dssp             HHHTTCSEEEEE
T ss_pred             HHHCCCCEeEEE
Confidence            4 345555 443

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=98.11  E-value=7e-05  Score=66.02  Aligned_cols=87  Identities=10%  Similarity=0.117  Sum_probs=56.2

Q ss_pred             CcCcHHHHHHHHHHHhCCC--eEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCc----ccCc-chHHhhHHHHHH
Q 044563          169 HLKHMFTLKLFMKLQVRGW--PVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDN----EMQM-DSREYLSRRRTI  240 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv--~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~----~~~~-~~~~yKs~~R~~  240 (290)
                      .++.|++.++++.++++|+  ++.++||.+   +......|+..|+..+ +..+-....    ..++ +...|    +..
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~---~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~----~~~  213 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAY---KNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAF----EKA  213 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSC---HHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHH----HHH
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCC---hHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHH----HHH
Confidence            5689999999999999999  999999976   3455677777887644 333322111    1112 12222    223


Q ss_pred             HHhcCCe---EEEEeCCCcccccCC
Q 044563          241 LQKEGFH---ITGLISNQMDALIGQ  262 (290)
Q Consensus       241 i~~~GYr---Iv~~iGDq~sDl~G~  262 (290)
                      ++..|..   =+..|||..+|+.+.
T Consensus       214 ~~~lgi~~~~~~i~vGD~~~Di~~a  238 (282)
T 3nuq_A          214 MKESGLARYENAYFIDDSGKNIETG  238 (282)
T ss_dssp             HHHHTCCCGGGEEEEESCHHHHHHH
T ss_pred             HHHcCCCCcccEEEEcCCHHHHHHH
Confidence            3333432   256899999999764

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.11  E-value=5.3e-06  Score=72.73  Aligned_cols=100  Identities=10%  Similarity=-0.070  Sum_probs=63.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..+.+|++.++++.|+++|+++...|+++.     +.+-|+..|+..+ +.++-..+...+|+ .-.|.... +++--..
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~-----~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~-~~lg~~p  187 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSASKN-----AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSA-KGLNVNP  187 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHH-HHHTCCG
T ss_pred             ccccchhHHHHHHHHHhcccccccccccch-----hhhHhhhcccccccceeecccccCCCCCcHHHHHHHH-HHhCCCh
Confidence            456789999999999999999999888753     3456888897654 33333322222232 22233222 2222122


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -++ ..|||...|+.+. ..|-+++-++|+
T Consensus       188 ~e~-l~VGDs~~Di~aA~~aG~~~i~v~~~  216 (250)
T 4gib_A          188 QNC-IGIEDASAGIDAINSANMFSVGVGNY  216 (250)
T ss_dssp             GGE-EEEESSHHHHHHHHHTTCEEEEESCT
T ss_pred             HHe-EEECCCHHHHHHHHHcCCEEEEECCh
Confidence            334 4799999999875 357778877765

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=98.11  E-value=7.4e-06  Score=69.49  Aligned_cols=100  Identities=12%  Similarity=0.103  Sum_probs=64.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++|++++++||.+   +..+...|+..|+..+ +.++-......+++ ...|+    ..++..|
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~----~~~~~lg  173 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENNITMAIVSNKN---GERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVL----AALTNIN  173 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHH----HHHHHHT
T ss_pred             cceECcCHHHHHHHHHHCCCeEEEEECCC---HHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHH----HHHHHcC
Confidence            46789999999999999999999999975   4566778888897643 44444333222222 12232    3333334


Q ss_pred             Ce---EEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FH---ITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Yr---Iv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      ..   =+..|||..+|+... ..|-+++.+.|+
T Consensus       174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~  206 (231)
T 3kzx_A          174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGST  206 (231)
T ss_dssp             CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred             CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence            31   246899999999764 345566665443

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.10  E-value=1.1e-05  Score=66.70  Aligned_cols=124  Identities=13%  Similarity=0.180  Sum_probs=74.1

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc-----------
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-----------  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-----------  199 (290)
                      ++++||+||||.....       .|.. .+      ....+.|++.++++.|+++|++++++||++...           
T Consensus         2 k~v~~D~DGtL~~~~~-------~~~~-~~------~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~   67 (179)
T 3l8h_A            2 KLIILDRDGVVNQDSD-------AFVK-SP------DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNA   67 (179)
T ss_dssp             CEEEECSBTTTBCCCT-------TCCC-SG------GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHH
T ss_pred             CEEEEcCCCccccCCC-------ccCC-CH------HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHH
Confidence            5899999998776421       0111 01      234678999999999999999999999998521           


Q ss_pred             -hHHHHHHHHhCCCCCCCcceee---c-Cc-ccCcc-hHHhhHHHHHHHHhcCCe--EEEEeCCCcccccCC-CCcceEE
Q 044563          200 -RNATTELLISAGYRGWSSLIMR---L-DN-EMQMD-SREYLSRRRTILQKEGFH--ITGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       200 -r~~T~~NL~~~Gy~~~d~LiLR---~-~~-~~~~~-~~~yKs~~R~~i~~~GYr--Iv~~iGDq~sDl~G~-~~g~r~f  269 (290)
                       .+....-|+..|. ..+.++.-   . ++ ..+++ .-.|+    ..++..|..  =+..|||...|+.+. ..|-+++
T Consensus        68 ~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~KP~~~~~~----~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i  142 (179)
T 3l8h_A           68 IHDKMHRALAQMGG-VVDAIFMCPHGPDDGCACRKPLPGMYR----DIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPW  142 (179)
T ss_dssp             HHHHHHHHHHHTTC-CCCEEEEECCCTTSCCSSSTTSSHHHH----HHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEE
T ss_pred             HHHHHHHHHHhCCC-ceeEEEEcCCCCCCCCCCCCCCHHHHH----HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEE
Confidence             1345667778881 12333321   1 11 11222 22232    233333321  156899999999764 3455666


Q ss_pred             EccC
Q 044563          270 KLPN  273 (290)
Q Consensus       270 kLPN  273 (290)
                      -+..
T Consensus       143 ~v~~  146 (179)
T 3l8h_A          143 LVQT  146 (179)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            6554

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.09  E-value=3.7e-06  Score=72.41  Aligned_cols=125  Identities=12%  Similarity=0.022  Sum_probs=72.4

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      +.++|+||+||||-+..+...       ...+.   ......++|++.++++.|+++|+++.++||+++...   .+ +.
T Consensus         5 ~~kav~fDlDGTL~d~~~~~~-------~~~~~---~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~-~~   70 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFGAQAA-------TSDTP---DDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALS---TP-LA   70 (196)
T ss_dssp             CCSCEEEETBTTTBCTTSTTT-------SCSSC---CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HH-HH
T ss_pred             cCCEEEEcCCCceEecccccc-------chhhc---ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HH-hc
Confidence            346999999998865221110       00010   123456789999999999999999999999875432   22 22


Q ss_pred             hCCCCCCCcceeecCcccCcch-HHhhHHHHHHHHhcCCe---EEEEeCCCcccccCCC-CcceEEEccCC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDS-REYLSRRRTILQKEGFH---ITGLISNQMDALIGQS-LGKRVFKLPNP  274 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~GYr---Iv~~iGDq~sDl~G~~-~g~r~fkLPNP  274 (290)
                      .  + ..+.++-......+|.. -.|.    +.+++.|-.   =..+|||...|+.+.. .|-+++-+...
T Consensus        71 ~--~-~~d~v~~~~~~~~~KP~p~~~~----~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g  134 (196)
T 2oda_A           71 A--P-VNDWMIAAPRPTAGWPQPDACW----MALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASC  134 (196)
T ss_dssp             T--T-TTTTCEECCCCSSCTTSTHHHH----HHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSS
T ss_pred             C--c-cCCEEEECCcCCCCCCChHHHH----HHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccC
Confidence            2  2 12334433222222221 1222    233333431   2558999999998753 46666666543

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.08  E-value=1.3e-05  Score=64.52  Aligned_cols=72  Identities=11%  Similarity=0.276  Sum_probs=52.4

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc-----------
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ-----------  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~-----------  199 (290)
                      .+|+||+||||.+...      +.     +      ......|++.+.++.++++|+++++.|||+...           
T Consensus         2 k~i~~DlDGTL~~~~~------~~-----~------~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~   64 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANT------SD-----Y------RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIH   64 (126)
T ss_dssp             CEEEECSTTTTBCCCC------SC-----G------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHH
T ss_pred             CEEEEecCCCCCCCCC------Cc-----c------ccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHH
Confidence            4899999998876421      00     1      112456889999999999999999999998643           


Q ss_pred             -hHHHHHHHHhCCCCCCCccee
Q 044563          200 -RNATTELLISAGYRGWSSLIM  220 (290)
Q Consensus       200 -r~~T~~NL~~~Gy~~~d~LiL  220 (290)
                       ...+.++|++.|++ ++.+++
T Consensus        65 ~~~~i~~~~~~~~~~-~~~~~~   85 (126)
T 1xpj_A           65 TLPIITEWLDKHQVP-YDEILV   85 (126)
T ss_dssp             THHHHHHHHHHTTCC-CSEEEE
T ss_pred             HHHHHHHHHHHcCCC-EEEEEe
Confidence             45778888888874 434443

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.06  E-value=1.7e-05  Score=66.92  Aligned_cols=101  Identities=14%  Similarity=0.074  Sum_probs=63.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++|++++++||.+   +.....-|...|+..+ +.++-......+++ ...|+.. .+++--..
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~-~~~~~~~~  172 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGN---PQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALA-PRAFGVPA  172 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSC---HHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHH-HHHHTSCG
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCC---HHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHH-HHHhCCCc
Confidence            46778999999999999999999999976   3455667888887654 33333322222222 2223322 11221111


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      -+ +..|||...|+.+. ..|-+++.++.
T Consensus       173 ~~-~~~vGD~~~Di~~a~~~G~~~~~v~~  200 (233)
T 3umb_A          173 AQ-ILFVSSNGWDACGATWHGFTTFWINR  200 (233)
T ss_dssp             GG-EEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred             cc-EEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence            33 45789999999764 34666666544

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.05  E-value=2.7e-05  Score=66.13  Aligned_cols=99  Identities=15%  Similarity=0.186  Sum_probs=61.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC--cceeecCc-ccCcc-hHHhhHHHHHHHHhc
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS--SLIMRLDN-EMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d--~LiLR~~~-~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      .++.|++.++++.++++|+++.++||.+..   ...+.|.. |+..+-  ..+.-.+. ..+++ ...|+    ..++..
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~----~~~~~l  178 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQT---SLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYL----MALKKG  178 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHH----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchH---HHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHH----HHHHHc
Confidence            578899999999999999999999997643   34455667 776543  33332221 12222 12232    233333


Q ss_pred             CCe--EEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          245 GFH--ITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       245 GYr--Iv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      |..  =+..|||..+|+.+. ..|-+++-+.+..
T Consensus       179 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~  212 (247)
T 3dv9_A          179 GFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGP  212 (247)
T ss_dssp             TCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSS
T ss_pred             CCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCC
Confidence            321  156899999999874 3566777776653

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.04  E-value=2e-05  Score=66.26  Aligned_cols=100  Identities=13%  Similarity=0.097  Sum_probs=63.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++|++++++|+.+   +......|...|+..+ +.++-......+++ ...|+    ..++..|
T Consensus        94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~----~~~~~~~  166 (230)
T 3um9_A           94 SLTPFADVPQALQQLRAAGLKTAILSNGS---RHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYE----LAMDTLH  166 (230)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHH----HHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHhCCCeEEEEeCCC---HHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHH----HHHHHhC
Confidence            46788999999999999999999999986   4456667778887543 33333322222222 22232    2233333


Q ss_pred             C--eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 F--HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .  .=+..|||..+|+.+. ..|-+++.++.+
T Consensus       167 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~  198 (230)
T 3um9_A          167 LGESEILFVSCNSWDATGAKYFGYPVCWINRS  198 (230)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCCEEEECTT
T ss_pred             CCcccEEEEeCCHHHHHHHHHCCCEEEEEeCC
Confidence            2  2256789999999864 346666666554

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.03  E-value=1e-05  Score=71.08  Aligned_cols=60  Identities=23%  Similarity=0.203  Sum_probs=52.0

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+..                        ..+|++.+.+++|+++|++|+++|||+...+....+.|..
T Consensus         8 ~kli~~DlDGTLl~~~------------------------~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~   63 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSV------------------------TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRS   63 (268)
T ss_dssp             CSEEEEECBTTTEETT------------------------EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHH
T ss_pred             CCEEEEcCcCcEECCC------------------------EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHH
Confidence            4699999999887631                        2478899999999999999999999988778888899999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        64 lg~~   67 (268)
T 3qgm_A           64 FGLE   67 (268)
T ss_dssp             TTCC
T ss_pred             CCCC
Confidence            9996

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.99  E-value=1.1e-05  Score=68.29  Aligned_cols=94  Identities=11%  Similarity=-0.016  Sum_probs=57.3

Q ss_pred             CcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC--
Q 044563          171 KHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF--  246 (290)
Q Consensus       171 aip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY--  246 (290)
                      +.|++.++++.+++.|+++.++||.+.     +...|...|+..+ +.++-......+++ ...|+    ..++..|.  
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~----~~~~~lgi~~  163 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN-----APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFL----TAAAMLDVSP  163 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHTTCTTTCSEECCC---------CCHHH----HHHHHHTSCG
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh-----HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHH----HHHHHcCCCH
Confidence            799999999999999999999999743     5677888897643 33332221111111 11222    23333332  


Q ss_pred             eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .=+..|||..+|+.+. ..|-+++..++
T Consensus       164 ~~~i~vGDs~~Di~~a~~aG~~~~~~~~  191 (233)
T 3nas_A          164 ADCAAIEDAEAGISAIKSAGMFAVGVGQ  191 (233)
T ss_dssp             GGEEEEECSHHHHHHHHHTTCEEEECC-
T ss_pred             HHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            2245889999999864 34555665543

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.97  E-value=5.8e-05  Score=63.20  Aligned_cols=95  Identities=9%  Similarity=0.076  Sum_probs=62.6

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC--CcceeecCcc-----cCcchHHhhHHHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW--SSLIMRLDNE-----MQMDSREYLSRRRTI  240 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~--d~LiLR~~~~-----~~~~~~~yKs~~R~~  240 (290)
                      ..++.|++.++++.++++ ++++++||.+   +..+...|+..|+..+  +.++...+..     .++.  ..|...-++
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p--~~~~~~l~~  140 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTF---YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQK--DPKRQSVIA  140 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEE---HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSS--SHHHHHHHH
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECCh---HHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCC--chHHHHHHH
Confidence            457799999999999999 9999999975   4567788889898753  2344322221     0222  344444444


Q ss_pred             HHhcCCeEEEEeCCCcccccCCC-CcceEE
Q 044563          241 LQKEGFHITGLISNQMDALIGQS-LGKRVF  269 (290)
Q Consensus       241 i~~~GYrIv~~iGDq~sDl~G~~-~g~r~f  269 (290)
                      +...+-+ +..|||..+|+.+.. .|-++.
T Consensus       141 l~~~~~~-~~~iGD~~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          141 FKSLYYR-VIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             HHHTTCE-EEEEECSSTTHHHHHHSSEEEE
T ss_pred             HHhcCCE-EEEEeCChhhHHHHHhcCccEE
Confidence            5444444 458999999997643 454433

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=97.96  E-value=3.9e-06  Score=69.77  Aligned_cols=100  Identities=22%  Similarity=0.269  Sum_probs=56.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcch-HHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMDS-REYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.+++.|++++++||.+........+.+  .|+.. .+.++-.......+.. -.|+    ..++..|.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~--~~l~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~~~~  163 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEY--PEIRDAADHIYLSQDLGMRKPEARIYQ----HVLQAEGF  163 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGC--HHHHHHCSEEEEHHHHTCCTTCHHHHH----HHHHHHTC
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhc--cChhhheeeEEEecccCCCCCCHHHHH----HHHHHcCC
Confidence            467899999999999999999999998754422111110  12111 1333322111112221 1232    22333332


Q ss_pred             --eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 --HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 --rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                        .=+..|||..+|+.+. ..|-+++.+..+
T Consensus       164 ~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~  194 (206)
T 2b0c_A          164 SPSDTVFFDDNADNIEGANQLGITSILVKDK  194 (206)
T ss_dssp             CGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             CHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence              2245789999999764 346666666543

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=97.96  E-value=2.6e-05  Score=65.27  Aligned_cols=95  Identities=11%  Similarity=-0.030  Sum_probs=59.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecC----------cccCcchHHhhHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLD----------NEMQMDSREYLSR  236 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~----------~~~~~~~~~yKs~  236 (290)
                      ..++.|++.++++.++++|++++++||..   +......|+..|+..+ +..+-..+          ...++    -|..
T Consensus        73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k----~k~~  145 (217)
T 3m1y_A           73 SLPLFEGALELVSALKEKNYKVVCFSGGF---DLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSH----SKGE  145 (217)
T ss_dssp             TCCBCBTHHHHHHHHHTTTEEEEEEEEEE---HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTT----HHHH
T ss_pred             cCcCCCCHHHHHHHHHHCCCEEEEEcCCc---hhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCC----ChHH
Confidence            36789999999999999999999999964   4566677888888643 22221111          00111    1222


Q ss_pred             H-HHHHHhcCC--eEEEEeCCCcccccCCC-CcceEE
Q 044563          237 R-RTILQKEGF--HITGLISNQMDALIGQS-LGKRVF  269 (290)
Q Consensus       237 ~-R~~i~~~GY--rIv~~iGDq~sDl~G~~-~g~r~f  269 (290)
                      . +..++..|.  .=+..|||..+|+.+.. .|.++.
T Consensus       146 ~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~  182 (217)
T 3m1y_A          146 MLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIA  182 (217)
T ss_dssp             HHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEE
T ss_pred             HHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEE
Confidence            2 222333232  22569999999998643 455443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=97.92  E-value=2.5e-05  Score=68.24  Aligned_cols=99  Identities=12%  Similarity=0.011  Sum_probs=62.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCccee-ecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIM-RLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiL-R~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|+++|+++.++|++..     ....|...|...+-..+. ..+...+|+ .-.|.... +++--..-
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~-----~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~-~~lg~~p~  167 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVSLN-----APTILAALELREFFTFCADASQLKNSKPDPEIFLAAC-AGLGVPPQ  167 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCCTT-----HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHH-HHHTSCGG
T ss_pred             ccccccHHHHHHhhhcccccceecccccc-----hhhhhhhhhhccccccccccccccCCCCcHHHHHHHH-HHcCCChH
Confidence            35789999999999999999999999753     123588888765433333 222222332 22233222 22222223


Q ss_pred             eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      +++ .|||...|+.+. ..|-+++-+++.
T Consensus       168 e~l-~VgDs~~di~aA~~aG~~~I~V~~g  195 (243)
T 4g9b_A          168 ACI-GIEDAQAGIDAINASGMRSVGIGAG  195 (243)
T ss_dssp             GEE-EEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             HEE-EEcCCHHHHHHHHHcCCEEEEECCC
Confidence            444 689999999875 356777777654

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=97.91  E-value=2.2e-05  Score=67.32  Aligned_cols=100  Identities=13%  Similarity=0.085  Sum_probs=63.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC--cceeecCc-ccCcchHHhhHHHHHHHHhcC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS--SLIMRLDN-EMQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d--~LiLR~~~-~~~~~~~~yKs~~R~~i~~~G  245 (290)
                      ..+.|++.++++.++++|+++.++|+.+..   ...+.|.. |+..+-  ..+.-.+. ..+++.   ....+..++..|
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~---~~~~~~~~~~lg  180 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQL---SLLERLEH-NFPGMFHKELMVTAFDVKYGKPN---PEPYLMALKKGG  180 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCH---HHHTTHHH-HSTTTCCGGGEECTTTCSSCTTS---SHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHH---HHHHHHHH-hHHHhcCcceEEeHHhCCCCCCC---hHHHHHHHHHcC
Confidence            578899999999999999999999997643   34455666 776543  33333222 122211   122233344444


Q ss_pred             Ce--EEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          246 FH--ITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       246 Yr--Iv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      ..  =+..|||..+|+.+. ..|-+++.+.+..
T Consensus       181 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~  213 (243)
T 3qxg_A          181 LKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP  213 (243)
T ss_dssp             CCGGGEEEEECSHHHHHHHHHTTCEEEEECCSS
T ss_pred             CCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCC
Confidence            32  256899999999864 3566777776643

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=97.91  E-value=9.4e-06  Score=69.35  Aligned_cols=100  Identities=14%  Similarity=0.153  Sum_probs=62.4

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH---HhCCCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL---ISAGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL---~~~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      +..|++.++++.|+++ ++++++||.+........+.|   ...|+.. ++.++-..+...+++ ...|+.    .++..
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~----~~~~~  186 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKA----VTEDA  186 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHH----HHHHH
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHH----HHHHc
Confidence            4679999999999999 999999998866555555667   7777543 244443322222222 222332    22222


Q ss_pred             CC--eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          245 GF--HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       245 GY--rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      |.  .=+..|||..+|+.+. ..|-+++.+..+
T Consensus       187 g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~  219 (229)
T 4dcc_A          187 GIDPKETFFIDDSEINCKVAQELGISTYTPKAG  219 (229)
T ss_dssp             TCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred             CCCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence            32  2345889999999864 356666666553

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.90  E-value=1.4e-05  Score=70.19  Aligned_cols=60  Identities=17%  Similarity=0.235  Sum_probs=51.1

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+..                        ..+|++.+.+++|+++|++|+++|||+........+.|..
T Consensus         6 ~kli~~DlDGTLl~~~------------------------~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~   61 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNGT------------------------EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS   61 (266)
T ss_dssp             CSEEEEECSSSTTCHH------------------------HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCcCceEeCC------------------------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            4699999999887631                        1357899999999999999999999988777888888999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        62 lg~~   65 (266)
T 3pdw_A           62 FDIP   65 (266)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            9985

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=97.89  E-value=1.3e-05  Score=65.65  Aligned_cols=118  Identities=9%  Similarity=0.012  Sum_probs=63.9

Q ss_pred             CcEEEEecccccccCh-hhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          130 LDVVLMDIDDIFASSS-KYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~-y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      .++|+||+||||.... ++...  +    ..+.+|...      ++  .+++.|+++|++++++||++.   .....-|+
T Consensus         4 ik~vifD~DGTL~~~~~~~~~~--~----~~~~~~~~~------~~--~~l~~l~~~g~~~~i~T~~~~---~~~~~~~~   66 (164)
T 3e8m_A            4 IKLILTDIDGVWTDGGMFYDQT--G----NEWKKFNTS------DS--AGIFWAHNKGIPVGILTGEKT---EIVRRRAE   66 (164)
T ss_dssp             CCEEEECSTTTTSSSEEEECSS--S----CEEEEEEGG------GH--HHHHHHHHTTCCEEEECSSCC---HHHHHHHH
T ss_pred             ceEEEEcCCCceEcCcEEEcCC--C----cEEEEecCC------hH--HHHHHHHHCCCEEEEEeCCCh---HHHHHHHH
Confidence            4699999999776643 22111  0    011111100      00  178999999999999999864   45556677


Q ss_pred             hCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCCCcceEEEccC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQSLGKRVFKLPN  273 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~~g~r~fkLPN  273 (290)
                      ..|+..+   +-..    .++...++.- .+++. -...-+..|||..+|+.......-.+.+.|
T Consensus        67 ~~gl~~~---~~~~----kpk~~~~~~~-~~~~~-~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~  122 (164)
T 3e8m_A           67 KLKVDYL---FQGV----VDKLSAAEEL-CNELG-INLEQVAYIGDDLNDAKLLKRVGIAGVPAS  122 (164)
T ss_dssp             HTTCSEE---ECSC----SCHHHHHHHH-HHHHT-CCGGGEEEECCSGGGHHHHTTSSEEECCTT
T ss_pred             HcCCCEe---eccc----CChHHHHHHH-HHHcC-CCHHHEEEECCCHHHHHHHHHCCCeEEcCC
Confidence            7887532   1110    1111122222 22221 112346689999999986543223444444

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=97.89  E-value=3.9e-05  Score=64.40  Aligned_cols=99  Identities=10%  Similarity=-0.040  Sum_probs=64.7

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC-
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF-  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY-  246 (290)
                      ..+.|++.++++.+++.|++++++|+.+   +....+.|+..|+..+ +.++-......+++.   ....+..++..|. 
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~---~~~~~~~~~~l~~~  163 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGG---IDTATINLKALKLDINKINIVTRDDVSYGKPD---PDLFLAAAKKIGAP  163 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSC---HHHHHHHHHTTTCCTTSSCEECGGGSSCCTTS---THHHHHHHHHTTCC
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCc---hhhHHHHHHhcchhhhhheeeccccCCCCCCC---hHHHHHHHHHhCCC
Confidence            6789999999999999999999999985   4456677888888754 333332222222221   1222333444443 


Q ss_pred             -eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 -HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 -rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                       .=+..|||..+|+.+. ..|-+++-+.+
T Consensus       164 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  192 (233)
T 3s6j_A          164 IDECLVIGDAIWDMLAARRCKATGVGLLS  192 (233)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEEGG
T ss_pred             HHHEEEEeCCHHhHHHHHHCCCEEEEEeC
Confidence             2257999999999864 34666666654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=97.88  E-value=3e-05  Score=67.06  Aligned_cols=101  Identities=11%  Similarity=-0.056  Sum_probs=61.8

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcc-hHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMD-SREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GYr  247 (290)
                      ..+.|++.++++.+++.|++++++||.+........+.+.-.+|. ++.++-......+++ ...|    +..++..|..
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~kp~~~~~----~~~~~~lgi~  184 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVVRGRPFPDMA----LKVALELEVG  184 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSSSCTTSSHHH----HHHHHHHTCS
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcCCCCCCHHHH----HHHHHHcCCC
Confidence            578999999999999999999999998754434444444333331 233333222222221 2223    3334444544


Q ss_pred             E---EEEeCCCcccccCC-CCcceEEEccCC
Q 044563          248 I---TGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       248 I---v~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .   +..|||..+|+.+. ..|-+++-+...
T Consensus       185 ~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g  215 (277)
T 3iru_A          185 HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS  215 (277)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred             CCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence            4   67999999999864 346666666543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=97.88  E-value=1.6e-05  Score=70.28  Aligned_cols=60  Identities=17%  Similarity=0.252  Sum_probs=51.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+..                        ..+|++.+.+++++++|++|+|+|||+........+-|+.
T Consensus         5 ~kli~~DlDGTLl~~~------------------------~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~   60 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGK------------------------SRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRG   60 (264)
T ss_dssp             CCEEEECCBTTTEETT------------------------EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHT
T ss_pred             CCEEEEeCCCceEeCC------------------------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            4699999999887741                        2468999999999999999999999988888888899999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        61 lg~~   64 (264)
T 3epr_A           61 FNVE   64 (264)
T ss_dssp             TTCC
T ss_pred             CCCC
Confidence            9986

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=97.85  E-value=5.5e-05  Score=64.62  Aligned_cols=101  Identities=11%  Similarity=0.044  Sum_probs=62.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.|+++|++++++||.+   +..+...|+..|+..+ +.++-..+...+++ ...|+... +++--..
T Consensus        81 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~-~~~~~~~  156 (222)
T 2nyv_A           81 YTKPYPEIPYTLEALKSKGFKLAVVSNKL---EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTL-EILGEEP  156 (222)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHH-HHHTCCG
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEcCCC---HHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHH-HHhCCCc
Confidence            45688999999999999999999999965   4456677888887543 44443322112222 22233222 2221111


Q ss_pred             CeEEEEeCCCcccccCCC-CcceEEEccC
Q 044563          246 FHITGLISNQMDALIGQS-LGKRVFKLPN  273 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~~-~g~r~fkLPN  273 (290)
                      -+ +..|||..+|+.+.. .|-+++-+.+
T Consensus       157 ~~-~~~vGD~~~Di~~a~~aG~~~i~v~~  184 (222)
T 2nyv_A          157 EK-ALIVGDTDADIEAGKRAGTKTALALW  184 (222)
T ss_dssp             GG-EEEEESSHHHHHHHHHHTCEEEEETT
T ss_pred             hh-EEEECCCHHHHHHHHHCCCeEEEEcC
Confidence            23 458999999998643 4555555443

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.85  E-value=3e-05  Score=64.49  Aligned_cols=122  Identities=10%  Similarity=0.112  Sum_probs=77.1

Q ss_pred             cEEEEecccccccC-hhhhh---hccCC-C----------------CccchHHHHHh----hcCcCcHHHHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASS-SKYSN---LLIDR-V----------------NVRGYIECIEE----AKHLKHMFTLKLFMKLQVR  185 (290)
Q Consensus       131 ~AvVfDIDetLsn~-~y~~~---~~~G~-~----------------~~~~w~~Wv~~----~~apaip~~l~l~~~l~~~  185 (290)
                      ++||||+||||-++ +.+..   ..+|. .                +...+.++...    ...+++||+.++++.|++.
T Consensus         5 ~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~   84 (180)
T 3bwv_A            5 QRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLKHMIPEHEGLVMDILKEPGFFRNLDVMPHAQEVVKQLNEH   84 (180)
T ss_dssp             CEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGCTTCCC--------CHHHHHHHSTTGGGSCCBCTTHHHHHHHHTTT
T ss_pred             cEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHHcCccHHHHCCchHHHHHHHHhCcchhccCCCCcCHHHHHHHHHhc
Confidence            69999999966665 33211   11221 1                11234444321    2467899999999999985


Q ss_pred             CCeEEEecCCCc--cchHHHHHHHHhC-CCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC
Q 044563          186 GWPVILLSRKHE--GQRNATTELLISA-GYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       186 Gv~V~~iSgR~e--~~r~~T~~NL~~~-Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~  262 (290)
                       +++.++|++.+  ..+..+..+|... |...+...++-.++.        |      +   +-  ...|||...++.. 
T Consensus        85 -~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~--------~------l---~~--~l~ieDs~~~i~~-  143 (180)
T 3bwv_A           85 -YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN--------I------I---LA--DYLIDDNPKQLEI-  143 (180)
T ss_dssp             -SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG--------G------B---CC--SEEEESCHHHHHH-
T ss_pred             -CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC--------e------e---cc--cEEecCCcchHHH-
Confidence             99999999853  2245778889885 544455555543221        1      1   22  3689999999864 


Q ss_pred             CCcceEEEccCC
Q 044563          263 SLGKRVFKLPNP  274 (290)
Q Consensus       263 ~~g~r~fkLPNP  274 (290)
                      ..| +++-+|+|
T Consensus       144 aaG-~~i~~~~~  154 (180)
T 3bwv_A          144 FEG-KSIMFTAS  154 (180)
T ss_dssp             CSS-EEEEECCG
T ss_pred             hCC-CeEEeCCC
Confidence            358 89999876

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=97.85  E-value=3.4e-05  Score=63.01  Aligned_cols=117  Identities=16%  Similarity=0.204  Sum_probs=69.5

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+...+..     .....+        ..-.|++.++++.|+++|++++++|||+.   ..+...|+.
T Consensus         9 ~k~v~~DlDGTL~~~~~~~~-----~~~~~~--------~~~~~~~~~~l~~l~~~g~~~~i~T~~~~---~~~~~~l~~   72 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLYYT-----EHGETI--------KVFNVLDGIGIKLLQKMGITLAVISGRDS---APLITRLKE   72 (162)
T ss_dssp             CCEEEECCTTTTSCSEEEEE-----TTEEEE--------EEEEHHHHHHHHHHHTTTCEEEEEESCCC---HHHHHHHHH
T ss_pred             eeEEEEecCcceECCceeec-----CCCcee--------eeecccHHHHHHHHHHCCCEEEEEeCCCc---HHHHHHHHH
Confidence            46999999998876532100     000001        11236778999999999999999999974   455667778


Q ss_pred             CCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC--eEEEEeCCCcccccCCC-CcceEEEccCC
Q 044563          210 AGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF--HITGLISNQMDALIGQS-LGKRVFKLPNP  274 (290)
Q Consensus       210 ~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY--rIv~~iGDq~sDl~G~~-~g~r~fkLPNP  274 (290)
                      .|+..   .+-.   ... +...++    ..++..|.  .-+..|||..+|+.... .|-+ +.+.|+
T Consensus        73 ~gl~~---~~~~---~kp-~~~~~~----~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~-~~~~~~  128 (162)
T 2p9j_A           73 LGVEE---IYTG---SYK-KLEIYE----KIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFP-VAVRNA  128 (162)
T ss_dssp             TTCCE---EEEC---C---CHHHHH----HHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred             cCCHh---hccC---CCC-CHHHHH----HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EEecCc
Confidence            88752   2211   111 111122    23333332  24669999999998653 3544 445554

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.84  E-value=2.4e-05  Score=74.15  Aligned_cols=99  Identities=17%  Similarity=0.057  Sum_probs=70.1

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      .+++++||+||||-+.                        ..++|++.++++.|++.|++++|+||.+...+....+.|.
T Consensus        12 ~~~~~l~D~DGvl~~g------------------------~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~   67 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRG------------------------KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS   67 (352)
T ss_dssp             CCEEEEECCBTTTEET------------------------TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHH
T ss_pred             cCCEEEEECCCeeEcC------------------------CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHH
Confidence            4679999999988542                        1457899999999999999999999998888888889998


Q ss_pred             -hCCCCC-CCcceeecCc---ccCcchHHh---hHHHHHHHHhcCCeEEEE
Q 044563          209 -SAGYRG-WSSLIMRLDN---EMQMDSREY---LSRRRTILQKEGFHITGL  251 (290)
Q Consensus       209 -~~Gy~~-~d~LiLR~~~---~~~~~~~~y---Ks~~R~~i~~~GYrIv~~  251 (290)
                       ..|++- .++++.-...   ........|   -...|+.+++.|++++..
T Consensus        68 ~~lgi~~~~~~i~ts~~~~~~~~~~~~~v~viG~~~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           68 SKLDVDVSPLQIIQSHTPYKSLVNKYSRILAVGTPSVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             HHHTSCCCGGGEECTTGGGGGGTTTCSEEEEESSTTHHHHHHHHTCSEEEE
T ss_pred             HhcCCCCChhhEeehHHHHHHHHhcCCEEEEECCHHHHHHHHhCCCeEecc
Confidence             589972 3343321100   000000011   136788899999999964

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.82  E-value=3.7e-06  Score=80.93  Aligned_cols=111  Identities=8%  Similarity=0.103  Sum_probs=67.0

Q ss_pred             CCcEEEEecccccccChhhhhhccC-CCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc---------c
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLID-RVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE---------G  198 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G-~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e---------~  198 (290)
                      ...+++||+||||-....      | .|. ..+.+|.     .+.|++.++++.|+++|++|+++||++.         .
T Consensus        57 ~~k~v~fD~DGTL~~~~~------~~~~~-~~~~~~~-----~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~  124 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRS------GKVFP-TSPSDWR-----ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEV  124 (416)
T ss_dssp             CSSEEEECSBTTTEECSS------CSSSC-SSTTCCE-----ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHH
T ss_pred             CCeEEEEeCCCCccccCC------CccCC-CCHHHhh-----hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHH
Confidence            346999999997754311      1 011 1122222     2689999999999999999999999762         2


Q ss_pred             chHHHHHHHHhCCCCCCCcceeecCcccCcchH-HhhHHHHHHHHhcC----C--eEEEEeCCCc
Q 044563          199 QRNATTELLISAGYRGWSSLIMRLDNEMQMDSR-EYLSRRRTILQKEG----F--HITGLISNQM  256 (290)
Q Consensus       199 ~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~-~yKs~~R~~i~~~G----Y--rIv~~iGDq~  256 (290)
                      .+.....-|...|+. .+.++-..+...+|... .|.    ..++..|    .  .=..+|||..
T Consensus       125 ~~~~~~~~l~~lgl~-fd~i~~~~~~~~~KP~p~~~~----~a~~~l~~~~~v~~~~~l~VGDs~  184 (416)
T 3zvl_A          125 FKGKVEAVLEKLGVP-FQVLVATHAGLNRKPVSGMWD----HLQEQANEGIPISVEDSVFVGDAA  184 (416)
T ss_dssp             HHHHHHHHHHHHTSC-CEEEEECSSSTTSTTSSHHHH----HHHHHSSTTCCCCGGGCEEECSCS
T ss_pred             HHHHHHHHHHHcCCC-EEEEEECCCCCCCCCCHHHHH----HHHHHhCCCCCCCHHHeEEEECCC
Confidence            234467778889975 55555443333333322 232    2222222    1  1146999997

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=97.82  E-value=4.1e-05  Score=64.41  Aligned_cols=114  Identities=11%  Similarity=0.086  Sum_probs=63.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      ..+||||+||||.+...+.... +. ....|.-  .       ++.  +++.|+++|+++.++||++.   ..+..-++.
T Consensus        12 ~k~vifD~DGTL~d~~~~~~~~-~~-~~~~~~~--~-------~~~--~l~~L~~~g~~~~i~T~~~~---~~~~~~~~~   75 (176)
T 3mmz_A           12 IDAVVLDFDGTQTDDRVLIDSD-GR-EFVSVHR--G-------DGL--GIAALRKSGLTMLILSTEQN---PVVAARARK   75 (176)
T ss_dssp             CSEEEECCTTTTSCSCCEECTT-CC-EEEEEEH--H-------HHH--HHHHHHHTTCEEEEEESSCC---HHHHHHHHH
T ss_pred             CCEEEEeCCCCcCcCCEeecCC-cc-HhHhccc--c-------cHH--HHHHHHHCCCeEEEEECcCh---HHHHHHHHH
Confidence            4699999999777643221100 00 0011100  0       111  88999999999999999875   455667777


Q ss_pred             CCCCCCCcceeecCcccCcchHHhhHHH-HHHHHhcC---CeEEEEeCCCcccccCCCCcceEEEccC
Q 044563          210 AGYRGWSSLIMRLDNEMQMDSREYLSRR-RTILQKEG---FHITGLISNQMDALIGQSLGKRVFKLPN  273 (290)
Q Consensus       210 ~Gy~~~d~LiLR~~~~~~~~~~~yKs~~-R~~i~~~G---YrIv~~iGDq~sDl~G~~~g~r~fkLPN  273 (290)
                      .|+.     ++....  .      |... ++.++..|   .+ +..|||...|+.......-.+...|
T Consensus        76 lgi~-----~~~~~~--~------k~~~l~~~~~~~~~~~~~-~~~vGD~~nD~~~~~~ag~~v~~~~  129 (176)
T 3mmz_A           76 LKIP-----VLHGID--R------KDLALKQWCEEQGIAPER-VLYVGNDVNDLPCFALVGWPVAVAS  129 (176)
T ss_dssp             HTCC-----EEESCS--C------HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEEEECTT
T ss_pred             cCCe-----eEeCCC--C------hHHHHHHHHHHcCCCHHH-EEEEcCCHHHHHHHHHCCCeEECCC
Confidence            7874     222221  1      2222 22222223   34 4579999999986432223444444

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=97.81  E-value=2.9e-05  Score=72.98  Aligned_cols=102  Identities=14%  Similarity=0.156  Sum_probs=59.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCC---CccchHHHHHHHHhC-CCCCCCcceeecCcccCcch-HHhhHHHHHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRK---HEGQRNATTELLISA-GYRGWSSLIMRLDNEMQMDS-REYLSRRRTILQ  242 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR---~e~~r~~T~~NL~~~-Gy~~~d~LiLR~~~~~~~~~-~~yKs~~R~~i~  242 (290)
                      ..++.|+++++++.|+++|+++.++||.   ....+......+... .|  ++.++...+-..+|.. -.|... -+++-
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~--fd~i~~~~~~~~~KP~p~~~~~~-~~~lg  174 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIESCQVGMVKPEPQIYKFL-LDTLK  174 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEEHHHHTCCTTCHHHHHHH-HHHHT
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh--eeEEEeccccCCCCCCHHHHHHH-HHHcC
Confidence            4678999999999999999999999997   233343333333222 12  3454443322223332 223322 22232


Q ss_pred             hcCCeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          243 KEGFHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       243 ~~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      -+.-+++ .|||...|+.+. ..|-+++.+++
T Consensus       175 ~~p~~~~-~v~D~~~di~~a~~aG~~~~~~~~  205 (555)
T 3i28_A          175 ASPSEVV-FLDDIGANLKPARDLGMVTILVQD  205 (555)
T ss_dssp             CCGGGEE-EEESCHHHHHHHHHHTCEEEECSS
T ss_pred             CChhHEE-EECCcHHHHHHHHHcCCEEEEECC
Confidence            2234455 459999999764 34666666654

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.81  E-value=5.8e-05  Score=63.97  Aligned_cols=99  Identities=14%  Similarity=0.078  Sum_probs=62.0

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ....+.|++.++++.++++|++++++|+...   ......|+..|+..+ +.++-...-..+++ ...|+    ..++..
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~----~~~~~l  173 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVE---KAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMAL----HVARGL  173 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSSCH---HHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHH----HHHHHH
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCCCh---HHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHH----HHHHHc
Confidence            4466899999999999999999999999764   455666777786533 33332222111221 22233    223333


Q ss_pred             CCe--EEEEeCCCcccccCC-CCcceEEEcc
Q 044563          245 GFH--ITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       245 GYr--Iv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                      |..  =+..|||..+|+.+. ..|-+++-+.
T Consensus       174 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~  204 (237)
T 4ex6_A          174 GIPPERCVVIGDGVPDAEMGRAAGMTVIGVS  204 (237)
T ss_dssp             TCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred             CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence            332  256899999999864 3466665554

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=97.81  E-value=7.7e-05  Score=62.60  Aligned_cols=98  Identities=9%  Similarity=0.026  Sum_probs=63.3

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.|++.++++.++++|++++++|+..   +..+...|+..|+..+ +.++-......+++..   ...+..++..|..
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~---~~~~~~~~~lgi~  158 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKP---TVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKE---DVIRYAMESLNIK  158 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEE---HHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHH---HHHHHHHHHHTCC
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhCCHhheeeeeccCCCCCCCCCH---HHHHHHHHHhCcC
Confidence            4789999999999999999999999974   4567778888897643 3444333222233211   1122223333322


Q ss_pred             --EEEEeCCCcccccCC-CCcceEEEcc
Q 044563          248 --ITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       248 --Iv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                        =+..|||..+|+.+. ..|-+++-+.
T Consensus       159 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~  186 (226)
T 3mc1_A          159 SDDAIMIGDREYDVIGALKNNLPSIGVT  186 (226)
T ss_dssp             GGGEEEEESSHHHHHHHHTTTCCEEEES
T ss_pred             cccEEEECCCHHHHHHHHHCCCCEEEEc
Confidence              356899999999864 3455555554

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=97.80  E-value=5.3e-05  Score=65.74  Aligned_cols=99  Identities=11%  Similarity=0.091  Sum_probs=62.3

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC-
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG-  245 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G-  245 (290)
                      .++.|++.++++.|+++|++++++||.+.   ..+...|+..|+..+ +.++-.......+. ...|+.    .++..| 
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~----~~~~~~~  185 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPT---KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYY----LCGKFGL  185 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHH----HHHHHTC
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcH---HHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHH----HHHHhCc
Confidence            46779999999999999999999999864   456677888887543 33332211111221 222332    222223 


Q ss_pred             -CeEEEEeCCCcccccCCC-CcceEEEccCC
Q 044563          246 -FHITGLISNQMDALIGQS-LGKRVFKLPNP  274 (290)
Q Consensus       246 -YrIv~~iGDq~sDl~G~~-~g~r~fkLPNP  274 (290)
                       ..=+..|||..+|+.+.. .|-+++-+++.
T Consensus       186 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g  216 (243)
T 2hsz_A          186 YPKQILFVGDSQNDIFAAHSAGCAVVGLTYG  216 (243)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred             ChhhEEEEcCCHHHHHHHHHCCCeEEEEcCC
Confidence             223568999999998643 46666666553

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=97.79  E-value=2.6e-05  Score=65.10  Aligned_cols=98  Identities=16%  Similarity=0.078  Sum_probs=62.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.+ ++.|+++ ++++++||++   +..+...|+..|+..+ +.++-......+++ ...|+    ..+++.|
T Consensus        72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~~~  142 (201)
T 2w43_A           72 NLKAYEDTKY-LKEISEI-AEVYALSNGS---INEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYK----YFLDSIG  142 (201)
T ss_dssp             TCEECGGGGG-HHHHHHH-SEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHH----HHHHHHT
T ss_pred             ccccCCChHH-HHHHHhC-CeEEEEeCcC---HHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHH----HHHHhcC
Confidence            3577899999 9999999 9999999986   4566778888897543 33332221112222 22233    2223333


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -.=+..|||...|+.+. ..|-+++.++.+
T Consensus       143 ~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~  172 (201)
T 2w43_A          143 AKEAFLVSSNAFDVIGAKNAGMRSIFVNRK  172 (201)
T ss_dssp             CSCCEEEESCHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEEeCCHHHhHHHHHCCCEEEEECCC
Confidence            33356889999999864 357777776654

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.79  E-value=8.5e-05  Score=64.70  Aligned_cols=78  Identities=9%  Similarity=0.115  Sum_probs=56.5

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEE
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHIT  249 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv  249 (290)
                      ++.|++.++++.|+++|+++.++||++   +..+...|+..|+..+-.-++-          ..|....+.+. +.|++ 
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~---~~~~~~~~~~~gl~~~f~~~~~----------~~k~~~~k~~~-~~~~~-  208 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDN---RFVAKWVAEELGLDDYFAEVLP----------HEKAEKVKEVQ-QKYVT-  208 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHHHTCSEEECSCCG----------GGHHHHHHHHH-TTSCE-
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHcCChhHhHhcCH----------HHHHHHHHHHH-hcCCE-
Confidence            678999999999999999999999986   4456677788887533111111          13555555554 44676 


Q ss_pred             EEeCCCcccccCC
Q 044563          250 GLISNQMDALIGQ  262 (290)
Q Consensus       250 ~~iGDq~sDl~G~  262 (290)
                      +.|||..+|+...
T Consensus       209 ~~vGD~~nDi~~~  221 (280)
T 3skx_A          209 AMVGDGVNDAPAL  221 (280)
T ss_dssp             EEEECTTTTHHHH
T ss_pred             EEEeCCchhHHHH
Confidence            6899999999864

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=97.78  E-value=0.00012  Score=60.87  Aligned_cols=100  Identities=15%  Similarity=0.090  Sum_probs=62.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.+++.|++++++|+.+.   ....+.|...|+..+ +.++........++ ...++    ..++..|
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~----~~~~~~~  164 (226)
T 1te2_A           92 TRPLLPGVREAVALCKEQGLLVGLASASPL---HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYL----DCAAKLG  164 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHH----HHHHHHT
T ss_pred             cCCcCccHHHHHHHHHHCCCcEEEEeCCcH---HHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHH----HHHHHcC
Confidence            457789999999999999999999999863   345566777787543 34443322222221 12222    2223223


Q ss_pred             C--eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 F--HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .  .=+..|||..+|+... ..|-++..+.++
T Consensus       165 i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~  196 (226)
T 1te2_A          165 VDPLTCVALEDSVNGMIASKAARMRSIVVPAP  196 (226)
T ss_dssp             SCGGGEEEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred             CCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence            2  2256899999999864 346666666544

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.77  E-value=6.2e-05  Score=69.80  Aligned_cols=44  Identities=11%  Similarity=0.035  Sum_probs=38.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG  214 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~  214 (290)
                      ..++.|++.++++.|+++|+++.++||..   +..+...|+..|+..
T Consensus       177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~---~~~~~~~l~~lgl~~  220 (317)
T 4eze_A          177 RMTLSPGLLTILPVIKAKGFKTAIISGGL---DIFTQRLKARYQLDY  220 (317)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHHTCSE
T ss_pred             CCEECcCHHHHHHHHHhCCCEEEEEeCcc---HHHHHHHHHHcCCCe
Confidence            46789999999999999999999999954   677888888999864

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=97.76  E-value=2.4e-05  Score=69.12  Aligned_cols=59  Identities=19%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      .+++||+||||.+..                        .++|++.+++++++++|++++|+|||+...+....+.|++.
T Consensus         2 k~i~~D~DGtL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~l   57 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGN------------------------RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKM   57 (263)
T ss_dssp             EEEEEECBTTTEETT------------------------EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTT
T ss_pred             eEEEEeCcCceEeCC------------------------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHC
Confidence            489999999887531                        12467889999999999999999999988888889999999


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |++
T Consensus        58 g~~   60 (263)
T 1zjj_A           58 GID   60 (263)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            986

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=97.75  E-value=5.8e-05  Score=62.60  Aligned_cols=98  Identities=9%  Similarity=0.064  Sum_probs=61.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++| +++++||.+.   ......|+..|+..+ +.++.......+++. -.|+    ..++..|
T Consensus        84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~---~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~~~  155 (200)
T 3cnh_A           84 QSQPRPEVLALARDLGQRY-RMYSLNNEGR---DLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYR----LGLTLAQ  155 (200)
T ss_dssp             TCCBCHHHHHHHHHHTTTS-EEEEEECCCH---HHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHH----HHHHHHT
T ss_pred             cCccCccHHHHHHHHHHcC-CEEEEeCCcH---HHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHH----HHHHHcC
Confidence            4568999999999999999 9999999764   445566777776533 344432211122221 1222    2223323


Q ss_pred             C--eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 F--HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .  .=+..|||..+|+.+. ..|-+++.+.+
T Consensus       156 ~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~  186 (200)
T 3cnh_A          156 VRPEEAVMVDDRLQNVQAARAVGMHAVQCVD  186 (200)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHTTCEEEECSC
T ss_pred             CCHHHeEEeCCCHHHHHHHHHCCCEEEEECC
Confidence            2  2255789999999764 34666666654

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=97.75  E-value=0.00013  Score=62.12  Aligned_cols=98  Identities=8%  Similarity=0.039  Sum_probs=63.6

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.|++.++++.++++|++++++|+..   +..+...|+..|+..+ +..+-......+++..   ...+..++..|..
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~---~~~~~~~~~~g~~  182 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKP---TVFAETILRYFDIDRYFKYIAGSNLDGTRVNKN---EVIQYVLDLCNVK  182 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHH---HHHHHHHHHHTCC
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHcCcHhhEEEEEeccccCCCCCCH---HHHHHHHHHcCCC
Confidence            5789999999999999999999999964   5667778888887643 4444333322233211   1222233333432


Q ss_pred             ---EEEEeCCCcccccCC-CCcceEEEcc
Q 044563          248 ---ITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       248 ---Iv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                         =+..|||..+|+.+. ..|-+++-+.
T Consensus       183 ~~~~~i~vGD~~~Di~~a~~aG~~~i~v~  211 (240)
T 3sd7_A          183 DKDKVIMVGDRKYDIIGAKKIGIDSIGVL  211 (240)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             CCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence               346899999999864 2355555554

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.73  E-value=9.6e-05  Score=61.53  Aligned_cols=96  Identities=15%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             cCcCcHHHHHHHHHHHhCC-CeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRG-WPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~G-v~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++| ++++++|+.+   +......|+..|+..+ +.++-.+.    ++...|+    ..++..|
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~---~~~~~~~l~~~~~~~~f~~~~~~~k----pk~~~~~----~~~~~lg  171 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGKYKLVVATKGD---LLDQENKLERSGLSPYFDHIEVMSD----KTEKEYL----RLLSILQ  171 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCCCEEEEEEESC---HHHHHHHHHHHTCGGGCSEEEEESC----CSHHHHH----HHHHHHT
T ss_pred             cCCcCccHHHHHHHHHhCCCeEEEEEeCCc---hHHHHHHHHHhCcHhhhheeeecCC----CCHHHHH----HHHHHhC
Confidence            3478899999999999999 9999999765   4455667777787543 34443321    1122233    2233333


Q ss_pred             C--eEEEEeCCCc-ccccCC-CCcceEEEccCC
Q 044563          246 F--HITGLISNQM-DALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Y--rIv~~iGDq~-sDl~G~-~~g~r~fkLPNP  274 (290)
                      .  .=+..|||.. +|+.+. ..|-+++.+++.
T Consensus       172 i~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~  204 (234)
T 3ddh_A          172 IAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFE  204 (234)
T ss_dssp             CCGGGEEEEESCCCCCCHHHHHHTCEEEECCCC
T ss_pred             CCcceEEEECCCcHHHhHHHHHCCCeEEEecCC
Confidence            2  2256899998 999864 346677777664

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=97.72  E-value=5.5e-05  Score=65.08  Aligned_cols=101  Identities=10%  Similarity=0.062  Sum_probs=60.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC-CCCC-CCcceeec--CcccCcchHHhhHHHHHHHHh
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA-GYRG-WSSLIMRL--DNEMQMDSREYLSRRRTILQK  243 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~-Gy~~-~d~LiLR~--~~~~~~~~~~yKs~~R~~i~~  243 (290)
                      ...+.|++.++++.|+++|+++.++||.+..   .....|.+. |+.. .+..+...  ....+++.   ....+..++.
T Consensus       110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~---~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~---~~~~~~~~~~  183 (250)
T 3l5k_A          110 TAALMPGAEKLIIHLRKHGIPFALATSSRSA---SFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPD---PDIFLACAKR  183 (250)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCCEEEECSCCHH---HHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTS---THHHHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHH---HHHHHHHhccCHHhheeeEEecchhhccCCCCC---hHHHHHHHHH
Confidence            5678999999999999999999999998732   222333332 3322 23333322  11122211   1223344555


Q ss_pred             cCCeE----EEEeCCCcccccCC-CCcceEEEccCC
Q 044563          244 EGFHI----TGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       244 ~GYrI----v~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .|...    +..|||..+|+.+. ..|-+++.+.++
T Consensus       184 lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~  219 (250)
T 3l5k_A          184 FSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG  219 (250)
T ss_dssp             SSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred             cCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence            55432    67999999999864 346666666543

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=97.70  E-value=5.4e-05  Score=65.57  Aligned_cols=96  Identities=8%  Similarity=-0.068  Sum_probs=58.3

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCccc--------CcchHH--h---
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEM--------QMDSRE--Y---  233 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~--------~~~~~~--y---  233 (290)
                      ...++.|++.++++.|+++|++++++||.+.   ..+...|+  |+.+++.++-......        .+....  +   
T Consensus        74 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~  148 (236)
T 2fea_A           74 EDAKIREGFREFVAFINEHEIPFYVISGGMD---FFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQC  148 (236)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEH---HHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCC
T ss_pred             cCCCCCccHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCcccccccc
Confidence            3467899999999999999999999999863   34444555  7655544443221110        111111  2   


Q ss_pred             ---hHHHHHHHHhcCCeEEEEeCCCcccccCCC-CcceE
Q 044563          234 ---LSRRRTILQKEGFHITGLISNQMDALIGQS-LGKRV  268 (290)
Q Consensus       234 ---Ks~~R~~i~~~GYrIv~~iGDq~sDl~G~~-~g~r~  268 (290)
                         |...-+++. ....-+..|||..+|+.+.. .|-++
T Consensus       149 ~~~K~~~~~~~~-~~~~~~~~vGDs~~Di~~a~~aG~~~  186 (236)
T 2fea_A          149 GCCKPSVIHELS-EPNQYIIMIGDSVTDVEAAKLSDLCF  186 (236)
T ss_dssp             SSCHHHHHHHHC-CTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred             CCcHHHHHHHHh-ccCCeEEEEeCChHHHHHHHhCCeee
Confidence               323333332 22445679999999997643 35444

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=97.70  E-value=0.00012  Score=59.94  Aligned_cols=98  Identities=9%  Similarity=0.066  Sum_probs=60.9

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.|++.++++.++++|++++++|+.++    .+.+.|...|+..+ +..+.......+++.   ....+..++..|..
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~---~~~~~~~~~~~~~~  153 (190)
T 2fi1_A           81 PILFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEKTSIAAYFTEVVTSSSGFKRKPN---PESMLYLREKYQIS  153 (190)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHHTTCGGGEEEEECGGGCCCCTTS---CHHHHHHHHHTTCS
T ss_pred             CccCcCHHHHHHHHHHCCCcEEEEECCcH----HHHHHHHHcCCHhheeeeeeccccCCCCCC---HHHHHHHHHHcCCC
Confidence            34789999999999999999999999763    35677888887543 222222111112211   11222333333432


Q ss_pred             EEEEeCCCcccccCC-CCcceEEEccC
Q 044563          248 ITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       248 Iv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      =+..|||..+|+... ..|-+++.+.+
T Consensus       154 ~~~~iGD~~~Di~~a~~aG~~~~~~~~  180 (190)
T 2fi1_A          154 SGLVIGDRPIDIEAGQAAGLDTHLFTS  180 (190)
T ss_dssp             SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred             eEEEEcCCHHHHHHHHHcCCeEEEECC
Confidence            356899999999864 34666665544

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=97.68  E-value=0.00016  Score=62.61  Aligned_cols=96  Identities=14%  Similarity=0.075  Sum_probs=60.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.++  |++++++||.+.   ......|+..|+..+ +.++-......+++ ...|+.    .++..|.
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~---~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~----~~~~~~~  162 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAP---DMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYAL----VEEVLGV  162 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHH----HHHHHCC
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCH---HHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHH----HHHHcCC
Confidence            467899999999999  999999999864   455667888887543 34433322222222 222332    2233332


Q ss_pred             --eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 --HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 --rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                        .=+..|||..+|+.+. ..|-+++.+..
T Consensus       163 ~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          163 TPAEVLFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             CHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence              1245779999999864 34666666654

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=97.68  E-value=5.5e-05  Score=65.45  Aligned_cols=101  Identities=13%  Similarity=0.002  Sum_probs=63.6

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-Cc-ceeecCcc-cCcchHHhhHHHHHHHHh
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SS-LIMRLDNE-MQMDSREYLSRRRTILQK  243 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~-LiLR~~~~-~~~~~~~yKs~~R~~i~~  243 (290)
                      ....+.|++.++++.++++|++++++|+.+   +..+.+.|+..|+..+ +. ++-..... .+++.   ....++.++.
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~---~~~~~~~~~~  180 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNSE---RGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPH---PDLYTFAAQQ  180 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSSC---HHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTS---SHHHHHHHHH
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHhcChHhhccceEEeHhhcCcCCCCC---hHHHHHHHHH
Confidence            356789999999999999999999999986   4456677888887532 33 33221111 22211   1122233333


Q ss_pred             cCC--eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          244 EGF--HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       244 ~GY--rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .|.  .=+..|||..+|+.+. ..|-+++.+-+
T Consensus       181 lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  213 (259)
T 4eek_A          181 LGILPERCVVIEDSVTGGAAGLAAGATLWGLLV  213 (259)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEECC
T ss_pred             cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEcc
Confidence            342  2267899999999864 34666665543

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=97.67  E-value=5.2e-05  Score=66.47  Aligned_cols=61  Identities=11%  Similarity=0.177  Sum_probs=49.9

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      ..++|+||+||||.+..                        ...|++.+.+++++++|++++++|||+...+....+.|+
T Consensus        16 ~~~~v~~DlDGTLl~~~------------------------~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~   71 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDD------------------------SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLR   71 (271)
T ss_dssp             GCCEEEECCBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHH
T ss_pred             CCCEEEEcCcCcEEeCC------------------------EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHH
Confidence            35799999999887741                        224567889999999999999999887777777888888


Q ss_pred             hCCCC
Q 044563          209 SAGYR  213 (290)
Q Consensus       209 ~~Gy~  213 (290)
                      ..|++
T Consensus        72 ~lg~~   76 (271)
T 1vjr_A           72 NMGVD   76 (271)
T ss_dssp             HTTCC
T ss_pred             HcCCC
Confidence            88886

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=97.65  E-value=6.7e-05  Score=62.61  Aligned_cols=96  Identities=11%  Similarity=0.114  Sum_probs=57.5

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh------CCCCC-CCcceeecCcccCcc-hHHhhHHHHHHH
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS------AGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTIL  241 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~------~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i  241 (290)
                      ++.|++.++++.+++ |++++++||.+.   ..+...|+.      .|+.. ++.++.......+++ ...|+    ..+
T Consensus        89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~---~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~----~~~  160 (211)
T 2i6x_A           89 EISAEKFDYIDSLRP-DYRLFLLSNTNP---YVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFL----EMI  160 (211)
T ss_dssp             EECHHHHHHHHHHTT-TSEEEEEECCCH---HHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHH----HHH
T ss_pred             ccChHHHHHHHHHHc-CCeEEEEeCCCH---HHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHH----HHH
Confidence            678999999999999 999999999763   344445555      57543 244443221112222 12232    223


Q ss_pred             HhcCC--eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          242 QKEGF--HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       242 ~~~GY--rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      +..|.  .=+..|||..+|+.+. ..|-+++....
T Consensus       161 ~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~  195 (211)
T 2i6x_A          161 ADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN  195 (211)
T ss_dssp             HHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred             HHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence            33332  2256899999999764 34655555543

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=97.63  E-value=6.2e-05  Score=62.21  Aligned_cols=93  Identities=12%  Similarity=0.040  Sum_probs=55.9

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC---CC-cceeecCcc-----cCcchHHhhHHHHH
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG---WS-SLIMRLDNE-----MQMDSREYLSRRRT  239 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~---~d-~LiLR~~~~-----~~~~~~~yKs~~R~  239 (290)
                      ..+.|++.++++.++++|++++++||..   +......++..|+..   +. .++....+.     ..+.   .|....+
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  154 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGL---SESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNG---ACDSKLS  154 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTS---TTTCHHH
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCc---HHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCC---CcccHHH
Confidence            4588999999999999999999999965   455667778888852   11 122211110     0111   1111122


Q ss_pred             HHHhc-C--CeEEEEeCCCcccccCCCCcce
Q 044563          240 ILQKE-G--FHITGLISNQMDALIGQSLGKR  267 (290)
Q Consensus       240 ~i~~~-G--YrIv~~iGDq~sDl~G~~~g~r  267 (290)
                      .+.+. |  -.=+..|||..+|+.....|-+
T Consensus       155 ~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~  185 (219)
T 3kd3_A          155 AFDKAKGLIDGEVIAIGDGYTDYQLYEKGYA  185 (219)
T ss_dssp             HHHHHGGGCCSEEEEEESSHHHHHHHHHTSC
T ss_pred             HHHHHhCCCCCCEEEEECCHhHHHHHhCCCC
Confidence            22221 2  3346789999999986544444

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.62  E-value=7.1e-05  Score=65.72  Aligned_cols=98  Identities=12%  Similarity=0.132  Sum_probs=63.2

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.|+++|++++++||.++.    ...-|+..|+..+ +.++.......+++ ...|+    ..++..|.
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~----~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~~g~  176 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR----LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQ----EALRLAHM  176 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCTT----HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHH----HHHHHHTC
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcHH----HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHH----HHHHHcCC
Confidence            368999999999999999999999996542    3677888897543 33333322222222 22232    22333332


Q ss_pred             --eEEEEeCCCc-ccccCC-CCcceEEEccCC
Q 044563          247 --HITGLISNQM-DALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 --rIv~~iGDq~-sDl~G~-~~g~r~fkLPNP  274 (290)
                        .=+..|||.+ .|+.+. ..|-+++.+..+
T Consensus       177 ~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~  208 (263)
T 3k1z_A          177 EPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP  208 (263)
T ss_dssp             CGGGEEEEESCHHHHTHHHHTTTCEEEEECCS
T ss_pred             CHHHEEEECCCcHHHHHHHHHCCCEEEEEcCC
Confidence              2256899998 999864 457777766654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=97.61  E-value=0.0001  Score=65.49  Aligned_cols=60  Identities=8%  Similarity=0.045  Sum_probs=50.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||-+..                        ..+|++.+.++.++++|++++++|||+...+....+.|+.
T Consensus        14 ~k~i~~D~DGtL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~   69 (284)
T 2hx1_A           14 YKCIFFDAFGVLKTYN------------------------GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHK   69 (284)
T ss_dssp             CSEEEECSBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEEcCcCCcCcCC------------------------eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHH
Confidence            4699999999886531                        2357788999999999999999999887778888999999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        70 lg~~   73 (284)
T 2hx1_A           70 LGLF   73 (284)
T ss_dssp             TTCT
T ss_pred             CCcC
Confidence            9986

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.61  E-value=0.00024  Score=59.67  Aligned_cols=97  Identities=14%  Similarity=0.111  Sum_probs=60.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.|++.++++.++ .|++++++|+.+   +......|+..|+..+ +.++-......+++.   ....+..++..|.
T Consensus       105 ~~~~~~~~~~~l~~l~-~g~~~~i~sn~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~---~~~~~~~~~~lgi  177 (240)
T 3qnm_A          105 KSGLMPHAKEVLEYLA-PQYNLYILSNGF---RELQSRKMRSAGVDRYFKKIILSEDLGVLKPR---PEIFHFALSATQS  177 (240)
T ss_dssp             CCCBSTTHHHHHHHHT-TTSEEEEEECSC---HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTS---HHHHHHHHHHTTC
T ss_pred             cCCcCccHHHHHHHHH-cCCeEEEEeCCc---hHHHHHHHHHcChHhhceeEEEeccCCCCCCC---HHHHHHHHHHcCC
Confidence            3678999999999999 999999999975   4455667777787543 343333222222221   1222333443442


Q ss_pred             --eEEEEeCCCc-ccccCC-CCcceEEEc
Q 044563          247 --HITGLISNQM-DALIGQ-SLGKRVFKL  271 (290)
Q Consensus       247 --rIv~~iGDq~-sDl~G~-~~g~r~fkL  271 (290)
                        .=+..|||.+ +|+.+. ..|-+++.+
T Consensus       178 ~~~~~~~iGD~~~~Di~~a~~aG~~~~~~  206 (240)
T 3qnm_A          178 ELRESLMIGDSWEADITGAHGVGMHQAFY  206 (240)
T ss_dssp             CGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred             CcccEEEECCCchHhHHHHHHcCCeEEEE
Confidence              2356899996 999764 245544444

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=97.60  E-value=6.7e-05  Score=63.78  Aligned_cols=104  Identities=10%  Similarity=0.116  Sum_probs=59.5

Q ss_pred             CcEEEEecccccccChhh-hhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          130 LDVVLMDIDDIFASSSKY-SNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~-~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      ..+||||+||||.++..+ ...  +.. ...+.  ...       +.  +++.|+++|+++.++||++.   ..+.+-|+
T Consensus        19 ik~vifD~DGTL~d~~~~~~~~--~~~-~~~~~--~~~-------~~--~l~~L~~~g~~~~i~T~~~~---~~~~~~~~   81 (189)
T 3mn1_A           19 IKLAVFDVDGVLTDGRLYFMED--GSE-IKTFN--TLD-------GQ--GIKMLIASGVTTAIISGRKT---AIVERRAK   81 (189)
T ss_dssp             CCEEEECSTTTTSCSEEEEETT--SCE-EEEEE--HHH-------HH--HHHHHHHTTCEEEEECSSCC---HHHHHHHH
T ss_pred             CCEEEEcCCCCcCCccEeeccC--CcE-eeeec--ccc-------HH--HHHHHHHCCCEEEEEECcCh---HHHHHHHH
Confidence            469999999987776322 111  000 00010  001       11  88999999999999999874   45566777


Q ss_pred             hCCCCCCCcceeecCcccCcchHHhhHHH-HHHHHhcC--CeEEEEeCCCcccccCC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDSREYLSRR-RTILQKEG--FHITGLISNQMDALIGQ  262 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~-R~~i~~~G--YrIv~~iGDq~sDl~G~  262 (290)
                      ..|+..+   +-..   ..      |... ++.++..|  -.-+..|||...|+...
T Consensus        82 ~lgl~~~---f~~~---~~------K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~  126 (189)
T 3mn1_A           82 SLGIEHL---FQGR---ED------KLVVLDKLLAELQLGYEQVAYLGDDLPDLPVI  126 (189)
T ss_dssp             HHTCSEE---ECSC---SC------HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HcCCHHH---hcCc---CC------hHHHHHHHHHHcCCChhHEEEECCCHHHHHHH
Confidence            7787532   2111   11      2222 22222223  23356789999999864

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=97.59  E-value=0.00011  Score=61.55  Aligned_cols=105  Identities=13%  Similarity=0.120  Sum_probs=62.7

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+...+-.     .+...        ...-.+.+.++++.|+++|++++++|||+..   .+..-++.
T Consensus         8 ik~i~~DlDGTL~~~~~~~~-----~~~~~--------~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~---~~~~~~~~   71 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQLHYD-----ANGEA--------IKSFHVRDGLGIKMLMDADIQVAVLSGRDSP---ILRRRIAD   71 (180)
T ss_dssp             CCEEEEECTTTTSCSEEEEE-----TTEEE--------EEEEEHHHHHHHHHHHHTTCEEEEEESCCCH---HHHHHHHH
T ss_pred             CeEEEEeCCCCcCCCCeeec-----cCcce--------eeeeccchHHHHHHHHHCCCeEEEEeCCCcH---HHHHHHHH
Confidence            36999999998876532110     00000        0012345678999999999999999999753   45556677


Q ss_pred             CCCCCCCcceeecCcccCcchHHhhHHH-HHHHHhcCC--eEEEEeCCCcccccCC
Q 044563          210 AGYRGWSSLIMRLDNEMQMDSREYLSRR-RTILQKEGF--HITGLISNQMDALIGQ  262 (290)
Q Consensus       210 ~Gy~~~d~LiLR~~~~~~~~~~~yKs~~-R~~i~~~GY--rIv~~iGDq~sDl~G~  262 (290)
                      .|+..   .+ -.  .  ++    |... ++-++..|.  .-+..|||...|+...
T Consensus        72 lgl~~---~~-~~--~--k~----k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~  115 (180)
T 1k1e_A           72 LGIKL---FF-LG--K--LE----KETACFDLMKQAGVTAEQTAYIGDDSVDLPAF  115 (180)
T ss_dssp             HTCCE---EE-ES--C--SC----HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             cCCce---ee-cC--C--CC----cHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            78752   22 11  1  11    2222 222223242  3467999999999764

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=97.54  E-value=8.9e-05  Score=64.91  Aligned_cols=104  Identities=9%  Similarity=0.059  Sum_probs=60.1

Q ss_pred             CcEEEEecccccccChh-hhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          130 LDVVLMDIDDIFASSSK-YSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y-~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      ..+||||+||||.++.. +...  +. ....+.-         .++.  +++.|+++|+++.++||++.   ..+.+-|+
T Consensus        49 ik~viFDlDGTL~Ds~~~~~~~--~~-~~~~~~~---------~d~~--~L~~L~~~G~~l~I~T~~~~---~~~~~~l~  111 (211)
T 3ij5_A           49 IRLLICDVDGVMSDGLIYMGNQ--GE-ELKAFNV---------RDGY--GIRCLITSDIDVAIITGRRA---KLLEDRAN  111 (211)
T ss_dssp             CSEEEECCTTTTSSSEEEEETT--SC-EEEEEEH---------HHHH--HHHHHHHTTCEEEEECSSCC---HHHHHHHH
T ss_pred             CCEEEEeCCCCEECCHHHHhhh--hH-HHHHhcc---------chHH--HHHHHHHCCCEEEEEeCCCH---HHHHHHHH
Confidence            45999999997777632 2111  10 0000100         0111  88999999999999999864   45667778


Q ss_pred             hCCCCCCCcceeecCcccCcchHHhhHHH-HHHHHhcC--CeEEEEeCCCcccccCC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDSREYLSRR-RTILQKEG--FHITGLISNQMDALIGQ  262 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~-R~~i~~~G--YrIv~~iGDq~sDl~G~  262 (290)
                      ..|+..   .+-. .  ..      |... ++.++..|  ..-+..|||...|+...
T Consensus       112 ~lgi~~---~f~~-~--k~------K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~  156 (211)
T 3ij5_A          112 TLGITH---LYQG-Q--SD------KLVAYHELLATLQCQPEQVAYIGDDLIDWPVM  156 (211)
T ss_dssp             HHTCCE---EECS-C--SS------HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HcCCch---hhcc-c--CC------hHHHHHHHHHHcCcCcceEEEEcCCHHHHHHH
Confidence            888752   2211 1  11      2222 22222222  33456899999999764

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=97.53  E-value=6.6e-05  Score=63.26  Aligned_cols=88  Identities=6%  Similarity=-0.107  Sum_probs=57.3

Q ss_pred             cCcCcHHHHHHHHHHHhC-CCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVR-GWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.|++.++++.|+++ |+++.++||++.....   ..|...|+  .+.++-.              .   .+++.|.
T Consensus        71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~---~~l~~~gl--f~~i~~~--------------~---~~~~~~~  128 (193)
T 2i7d_A           71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHH---CVGEKYRW--VEQHLGP--------------Q---FVERIIL  128 (193)
T ss_dssp             TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTT---THHHHHHH--HHHHHCH--------------H---HHTTEEE
T ss_pred             cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHH---HHHHHhCc--hhhhcCH--------------H---HHHHcCC
Confidence            467899999999999999 9999999999765332   33444444  2222210              0   1222111


Q ss_pred             --eEEEEeCCCccc----ccCC--CCcceEEEccCCccc
Q 044563          247 --HITGLISNQMDA----LIGQ--SLGKRVFKLPNPLYY  277 (290)
Q Consensus       247 --rIv~~iGDq~sD----l~G~--~~g~r~fkLPNPmY~  277 (290)
                        .=+..|||...|    ..+.  ..|-+++.+++|.-.
T Consensus       129 ~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~  167 (193)
T 2i7d_A          129 TRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNR  167 (193)
T ss_dssp             CSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGT
T ss_pred             CcccEEEECCchhhCcHHHhhcccccccceEEEEeccCc
Confidence              112478999999    7665  468888888876433

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=97.53  E-value=3.9e-05  Score=65.61  Aligned_cols=106  Identities=10%  Similarity=0.113  Sum_probs=59.8

Q ss_pred             CCcEEEEecccccccCh-hhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSS-KYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~-y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      +-++|+||+||||.+.. ++....      ..+.+|..      .++.  .++.|+++|++++++||++.   ..+.+-|
T Consensus        18 ~ik~vifD~DGtL~~~~~~~~~~~------~~~~~~~~------~d~~--~l~~L~~~g~~~~ivTn~~~---~~~~~~l   80 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHIDNHG------NELKSFHV------QDGM--GLKLLMAAGIQVAIITTAQN---AVVDHRM   80 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEECTTC------CEECCBCH------HHHH--HHHHHHHTTCEEEEECSCCS---HHHHHHH
T ss_pred             cCCEEEEeCCCCCCCCceeecCCc------hhhhhccc------cChH--HHHHHHHCCCeEEEEeCcCh---HHHHHHH
Confidence            34699999999776642 221110      11111110      1111  47899999999999999864   5566677


Q ss_pred             HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCC--eEEEEeCCCcccccCC
Q 044563          208 ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGF--HITGLISNQMDALIGQ  262 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY--rIv~~iGDq~sDl~G~  262 (290)
                      +..|+..   .+-. .  .. +...++.    .++..|.  .=+..|||...|+...
T Consensus        81 ~~lgl~~---~~~~-~--kp-k~~~~~~----~~~~~~~~~~~~~~vGD~~~Di~~~  126 (191)
T 3n1u_A           81 EQLGITH---YYKG-Q--VD-KRSAYQH----LKKTLGLNDDEFAYIGDDLPDLPLI  126 (191)
T ss_dssp             HHHTCCE---EECS-C--SS-CHHHHHH----HHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHcCCcc---ceeC-C--CC-hHHHHHH----HHHHhCCCHHHEEEECCCHHHHHHH
Confidence            8888863   2211 1  11 1112222    2222222  2356899999999864

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=97.53  E-value=0.00018  Score=62.88  Aligned_cols=60  Identities=12%  Similarity=0.163  Sum_probs=50.7

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||-+..                        ..++++.+.++.+++.|++++++|||....+....+.|++
T Consensus         5 ~k~v~fDlDGTL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~   60 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGK------------------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLAN   60 (264)
T ss_dssp             CCEEEECCBTTTEETT------------------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCeEEeCC------------------------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            4699999999887631                        2356788899999999999999999998888888888888


Q ss_pred             -CCCC
Q 044563          210 -AGYR  213 (290)
Q Consensus       210 -~Gy~  213 (290)
                       .|++
T Consensus        61 ~~g~~   65 (264)
T 1yv9_A           61 EFDIH   65 (264)
T ss_dssp             HSCCC
T ss_pred             hcCCC
Confidence             8986

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=97.50  E-value=0.00022  Score=59.91  Aligned_cols=94  Identities=10%  Similarity=0.102  Sum_probs=57.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.+++. ++++++||.+..        |...|+..+ +..+-......+++ ...|+    ..++..|
T Consensus       103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~----~~~~~~~  169 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKT-FTLGVITNGNAD--------VRRLGLADYFAFALCAEDLGIGKPDPAPFL----EALRRAK  169 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHH----HHHHHHT
T ss_pred             cCccCcCHHHHHHHHHhC-CeEEEEECCchh--------hhhcCcHHHeeeeEEccccCCCCcCHHHHH----HHHHHhC
Confidence            345889999999999999 999999998764        667787543 33332221112221 22222    2233323


Q ss_pred             C--eEEEEeCCCc-ccccCC-CCcceEEEccCC
Q 044563          246 F--HITGLISNQM-DALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Y--rIv~~iGDq~-sDl~G~-~~g~r~fkLPNP  274 (290)
                      .  .=+..|||+. .|+.+. ..|-+++.+..+
T Consensus       170 ~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~  202 (230)
T 3vay_A          170 VDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQ  202 (230)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             CCchheEEEeCChHHHHHHHHHCCCEEEEEcCC
Confidence            2  2256899997 999764 356666666543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=97.50  E-value=0.00029  Score=59.14  Aligned_cols=97  Identities=13%  Similarity=0.147  Sum_probs=61.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.+++. ++++++||.+.   ..+...|+..|+..+ +.++-......+++ ...|+    ..++..|
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~----~~~~~~~  169 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDSDT---EQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFE----LALKKAG  169 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHH----HHHHHHT
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECCCH---HHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHH----HHHHHcC
Confidence            467889999999999999 99999999764   556677888887643 33333221111221 22232    2223333


Q ss_pred             C--eEEEEeCCCc-ccccCC-CCcceEEEcc
Q 044563          246 F--HITGLISNQM-DALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 Y--rIv~~iGDq~-sDl~G~-~~g~r~fkLP  272 (290)
                      .  .=+..|||.. +|+.+. ..|-+++.+.
T Consensus       170 ~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~  200 (234)
T 3u26_A          170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLD  200 (234)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred             CCchhEEEEcCCcHHHHHHHHHcCCEEEEEC
Confidence            2  2367899998 999764 3465555553

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=97.50  E-value=0.00013  Score=65.93  Aligned_cols=60  Identities=17%  Similarity=0.185  Sum_probs=51.0

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+..                        ..+|++.+.++.++++|++++++|||+...+....+.|++
T Consensus        21 ~k~i~~D~DGTL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~   76 (306)
T 2oyc_A           21 AQGVLFDCDGVLWNGE------------------------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR   76 (306)
T ss_dssp             CSEEEECSBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCcEecCC------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHh
Confidence            3599999999886531                        2356788999999999999999999988888888999999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        77 ~g~~   80 (306)
T 2oyc_A           77 LGFG   80 (306)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            9986

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=97.47  E-value=0.00012  Score=63.34  Aligned_cols=104  Identities=13%  Similarity=0.077  Sum_probs=59.3

Q ss_pred             CcEEEEecccccccC-hhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          130 LDVVLMDIDDIFASS-SKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~-~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      ..+|+||+||||... .++....      ..+.+|.        +.....++.|+++|+++.++||++.   ..+..-|+
T Consensus        25 ik~vifD~DGtL~d~~~~~~~~~------~~~~~~~--------~~d~~~l~~L~~~G~~~~ivT~~~~---~~~~~~l~   87 (195)
T 3n07_A           25 IKLLICDVDGVFSDGLIYMGNQG------EELKTFH--------TRDGYGVKALMNAGIEIAIITGRRS---QIVENRMK   87 (195)
T ss_dssp             CCEEEECSTTTTSCSCCEECTTS------CEECCCC--------TTHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHH
T ss_pred             CCEEEEcCCCCcCCCcEEEccCc------hhhheee--------cccHHHHHHHHHCCCEEEEEECcCH---HHHHHHHH
Confidence            469999999977663 2221110      1111110        0111247889999999999999864   45667778


Q ss_pred             hCCCCCCCcceeecCcccCcchHHhhHHH-HHHHHhcC--CeEEEEeCCCcccccCC
Q 044563          209 SAGYRGWSSLIMRLDNEMQMDSREYLSRR-RTILQKEG--FHITGLISNQMDALIGQ  262 (290)
Q Consensus       209 ~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~-R~~i~~~G--YrIv~~iGDq~sDl~G~  262 (290)
                      ..|+..   .+...   ..      |... ++.++..|  ..=+..|||...|+...
T Consensus        88 ~lgi~~---~~~~~---k~------k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~  132 (195)
T 3n07_A           88 ALGISL---IYQGQ---DD------KVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM  132 (195)
T ss_dssp             HTTCCE---EECSC---SS------HHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH
T ss_pred             HcCCcE---EeeCC---CC------cHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH
Confidence            888852   22111   11      2121 22222223  23366899999999754

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.44  E-value=0.00058  Score=60.28  Aligned_cols=98  Identities=8%  Similarity=0.136  Sum_probs=61.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.|++ |++++++||.+   +..+...|...|+..+ +.++...+...+|+. -.|..    .++..|
T Consensus       119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~----~~~~~~  190 (260)
T 2gfh_A          119 HMILADDVKAMLTELRK-EVRLLLLTNGD---RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYH----CCDLLG  190 (260)
T ss_dssp             TCCCCHHHHHHHHHHHT-TSEEEEEECSC---HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHH----HHHHHT
T ss_pred             cCCCCcCHHHHHHHHHc-CCcEEEEECcC---hHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHH----HHHHcC
Confidence            45788999999999998 59999999986   3456677888887643 444433322223322 22332    222223


Q ss_pred             C--eEEEEeCCC-cccccCC-CCcc-eEEEccC
Q 044563          246 F--HITGLISNQ-MDALIGQ-SLGK-RVFKLPN  273 (290)
Q Consensus       246 Y--rIv~~iGDq-~sDl~G~-~~g~-r~fkLPN  273 (290)
                      .  .=+..|||. ..|+.+. ..|- +++-+.+
T Consensus       191 ~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~  223 (260)
T 2gfh_A          191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINK  223 (260)
T ss_dssp             CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred             CChhhEEEECCCchhhHHHHHHCCCceEEEEcC
Confidence            2  224689995 8999865 3465 5555543

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=97.42  E-value=0.00029  Score=60.74  Aligned_cols=60  Identities=13%  Similarity=0.164  Sum_probs=47.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.+..                        ..++++.+.++.++++|++++++|||.........+.|..
T Consensus         7 ik~i~fDlDGTLld~~------------------------~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~   62 (259)
T 2ho4_A            7 LKAVLVDLNGTLHIED------------------------AAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKK   62 (259)
T ss_dssp             CCEEEEESSSSSCC---------------------------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             CCEEEEeCcCcEEeCC------------------------EeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHH
Confidence            4699999999887641                        1234566678899999999999999988777778888888


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        63 ~g~~   66 (259)
T 2ho4_A           63 LEFE   66 (259)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            8875

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=97.42  E-value=0.00049  Score=56.98  Aligned_cols=101  Identities=12%  Similarity=0.012  Sum_probs=62.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ...+.|++.++++.+++.|++++++|+...   ......|...|+..+ +..+.......+++.   ....+..++..|.
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~---~~~~~~~~~~~~~  160 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTKYR---FRILSFLRNHMPDDWFDIIIGGEDVTHHKPD---PEGLLLAIDRLKA  160 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSSCH---HHHHHHHHTSSCTTCCSEEECGGGCSSCTTS---THHHHHHHHHTTC
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECCCH---HHHHHHHHHcCchhheeeeeehhhcCCCCCC---hHHHHHHHHHhCC
Confidence            345689999999999999999999999753   445667777887543 333332221112211   1122233333342


Q ss_pred             e--EEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 H--ITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 r--Iv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .  =+..|||+.+|+... ..|.+++.+.|+
T Consensus       161 ~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~  191 (225)
T 3d6j_A          161 CPEEVLYIGDSTVDAGTAAAAGVSFTGVTSG  191 (225)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEETTS
T ss_pred             ChHHeEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence            2  245899999999764 346666666554

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.41  E-value=0.00021  Score=58.17  Aligned_cols=100  Identities=10%  Similarity=0.067  Sum_probs=61.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.+++.|++++++|+.....   .. .|...|+..+ +.++........++ ...++    ..++..|
T Consensus        83 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~~~  154 (207)
T 2go7_A           83 QVVLMPGAREVLAWADESGIQQFIYTHKGNNA---FT-ILKDLGVESYFTEILTSQSGFVRKPSPEAAT----YLLDKYQ  154 (207)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTHH---HH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHH----HHHHHHT
T ss_pred             cceeCcCHHHHHHHHHHCCCeEEEEeCCchHH---HH-HHHHcCchhheeeEEecCcCCCCCCCcHHHH----HHHHHhC
Confidence            34578999999999999999999999986543   33 5556676533 33333222112221 12222    2223233


Q ss_pred             C--eEEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          246 F--HITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       246 Y--rIv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      .  .=+..|||..+|+... ..|-.++-+.|..
T Consensus       155 i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          155 LNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred             CCcccEEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence            2  2356899999999864 3466667777653

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.41  E-value=0.00038  Score=58.83  Aligned_cols=107  Identities=7%  Similarity=0.080  Sum_probs=60.6

Q ss_pred             CCcEEEEecccccccCh-hhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSS-KYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~-y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      +.++|+||+||||.+.. ++...  +. ....|..           ....+++.|+++|++++++||++..   .....|
T Consensus        25 ~ik~vifD~DGTL~~~~~~~~~~--~~-~~~~~~~-----------~d~~~l~~L~~~g~~v~ivT~~~~~---~~~~~l   87 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLIYMGNN--GE-ELKAFNV-----------RDGYGIRCALTSDIEVAIITGRKAK---LVEDRC   87 (188)
T ss_dssp             TCSEEEECCCCCCBCSEEEEETT--SC-EEEEEEH-----------HHHHHHHHHHTTTCEEEEECSSCCH---HHHHHH
T ss_pred             cCCEEEEeCCCCcCCCCEEecCC--Cc-EEEEeec-----------ccHHHHHHHHHCCCeEEEEeCCChH---HHHHHH
Confidence            34699999999877642 22110  00 0011110           1113889999999999999999753   455666


Q ss_pred             HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcC--CeEEEEeCCCcccccCCC
Q 044563          208 ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEG--FHITGLISNQMDALIGQS  263 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G--YrIv~~iGDq~sDl~G~~  263 (290)
                      +..|+..   .+-.  . ..+ ...++    +.++..|  ..-+..|||..+|+....
T Consensus        88 ~~lgl~~---~~~~--~-kpk-~~~~~----~~~~~~g~~~~~~~~iGD~~~Di~~a~  134 (188)
T 2r8e_A           88 ATLGITH---LYQG--Q-SNK-LIAFS----DLLEKLAIAPENVAYVGDDLIDWPVME  134 (188)
T ss_dssp             HHHTCCE---EECS--C-SCS-HHHHH----HHHHHHTCCGGGEEEEESSGGGHHHHT
T ss_pred             HHcCCce---eecC--C-CCC-HHHHH----HHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence            7778752   2211  1 111 11122    2222224  234679999999998653

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=97.40  E-value=0.00024  Score=60.19  Aligned_cols=98  Identities=15%  Similarity=0.122  Sum_probs=61.9

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCc-chHHhhHHHHHHHHhcCC-
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM-DSREYLSRRRTILQKEGF-  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~GY-  246 (290)
                      .++.|++.++++.+++. ++++++||.+.   ......|+..|.. ++.++-...-...+ +...|    +..++..|. 
T Consensus       115 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~~~~~-f~~~~~~~~~~~~kp~~~~~----~~~~~~lgi~  185 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAE-YIIGPLSNGNT---SLLLDMAKNAGIP-WDVIIGSDINRKYKPDPQAY----LRTAQVLGLH  185 (254)
T ss_dssp             CCBCTTHHHHHHHHHHH-SEEEECSSSCH---HHHHHHHHHHTCC-CSCCCCHHHHTCCTTSHHHH----HHHHHHTTCC
T ss_pred             CcCCcCHHHHHHHHHhC-CeEEEEeCCCH---HHHHHHHHhCCCC-eeEEEEcCcCCCCCCCHHHH----HHHHHHcCCC
Confidence            35689999999999997 99999999764   4455667777864 44443322111122 11222    233333343 


Q ss_pred             -eEEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          247 -HITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       247 -rIv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                       .=+..|||..+|+.+. ..|-+++.+.+|-
T Consensus       186 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  216 (254)
T 3umg_A          186 PGEVMLAAAHNGDLEAAHATGLATAFILRPV  216 (254)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECCTT
T ss_pred             hHHEEEEeCChHhHHHHHHCCCEEEEEecCC
Confidence             2256899999999874 3577788777543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=97.38  E-value=0.00085  Score=57.97  Aligned_cols=102  Identities=9%  Similarity=-0.062  Sum_probs=59.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCc-chHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQM-DSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~GY  246 (290)
                      ...+.|++.++++.+++.|+++.++|+.+........+.+.-.++. .+.++-......++ +...++    ..++..|.
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~kp~~~~~~----~~~~~lgi  175 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVPAGRPYPWMCY----KNAMELGV  175 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSSCCTTSSHHHH----HHHHHHTC
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCccCCCCCCHHHHH----HHHHHhCC
Confidence            4567899999999999999999999998754444444444333331 12222211111111 122232    23333443


Q ss_pred             e---EEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 H---ITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 r---Iv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .   =+..|||..+|+... ..|-+++-+.+.
T Consensus       176 ~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~  207 (267)
T 1swv_A          176 YPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG  207 (267)
T ss_dssp             CSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred             CCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC
Confidence            3   267999999999864 346555655543

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=97.34  E-value=0.00059  Score=64.74  Aligned_cols=44  Identities=11%  Similarity=-0.099  Sum_probs=38.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG  214 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~  214 (290)
                      ..++.|++.++++.|+++|+++.++||.   .+..+...++..|+..
T Consensus       254 ~~~~~pg~~e~l~~Lk~~G~~~~ivS~~---~~~~~~~~~~~lgl~~  297 (415)
T 3p96_A          254 QLELMPGARTTLRTLRRLGYACGVVSGG---FRRIIEPLAEELMLDY  297 (415)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCSE
T ss_pred             hCccCccHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHcCccc
Confidence            4588999999999999999999999995   4567778888999863

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=97.34  E-value=0.00028  Score=59.09  Aligned_cols=99  Identities=12%  Similarity=0.051  Sum_probs=58.8

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcc-hHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMD-SREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.|++.++++.+++ |++++++||.+..   .....|+..+- .++.++-..+-...+. ...|+...+. ++..|..
T Consensus        98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~---~~~~~l~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~l~~-~~~lgi~  171 (240)
T 3smv_A           98 WPAFPDTVEALQYLKK-HYKLVILSNIDRN---EFKLSNAKLGV-EFDHIITAQDVGSYKPNPNNFTYMIDA-LAKAGIE  171 (240)
T ss_dssp             CCBCTTHHHHHHHHHH-HSEEEEEESSCHH---HHHHHHTTTCS-CCSEEEEHHHHTSCTTSHHHHHHHHHH-HHHTTCC
T ss_pred             CCCCCcHHHHHHHHHh-CCeEEEEeCCChh---HHHHHHHhcCC-ccCEEEEccccCCCCCCHHHHHHHHHH-HHhcCCC
Confidence            4688999999999999 8999999998643   33333444331 2344444332222222 2223333232 4444432


Q ss_pred             E--EEEeCCCc-ccccCC-CCcceEEEccC
Q 044563          248 I--TGLISNQM-DALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       248 I--v~~iGDq~-sDl~G~-~~g~r~fkLPN  273 (290)
                      .  +..|||.. +|+.+. ..|-+++.+..
T Consensus       172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~  201 (240)
T 3smv_A          172 KKDILHTAESLYHDHIPANDAGLVSAWIYR  201 (240)
T ss_dssp             GGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred             chhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence            2  56899997 999764 34666666544

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=97.30  E-value=0.00036  Score=59.52  Aligned_cols=96  Identities=17%  Similarity=0.108  Sum_probs=60.5

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcc-hHHhhHHHHHHHHhcCC--
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMD-SREYLSRRRTILQKEGF--  246 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY--  246 (290)
                      .+.|++.++++.+++. ++++++|+.+.   ......|+..|.. ++..+-......+++ ...|+    ..++..|.  
T Consensus       120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~~g~~-f~~~~~~~~~~~~kp~~~~~~----~~~~~lgi~~  190 (254)
T 3umc_A          120 RPWPDTLAGMHALKAD-YWLAALSNGNT---ALMLDVARHAGLP-WDMLLCADLFGHYKPDPQVYL----GACRLLDLPP  190 (254)
T ss_dssp             EECTTHHHHHHHHTTT-SEEEECCSSCH---HHHHHHHHHHTCC-CSEECCHHHHTCCTTSHHHHH----HHHHHHTCCG
T ss_pred             CCCccHHHHHHHHHhc-CeEEEEeCCCH---HHHHHHHHHcCCC-cceEEeecccccCCCCHHHHH----HHHHHcCCCh
Confidence            5679999999999986 99999999764   4455667777874 554443322112221 22233    22333332  


Q ss_pred             eEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          247 HITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .=+..|||...|+.+. ..|-+++.+..|
T Consensus       191 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~  219 (254)
T 3umc_A          191 QEVMLCAAHNYDLKAARALGLKTAFIARP  219 (254)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred             HHEEEEcCchHhHHHHHHCCCeEEEEecC
Confidence            2256899999999875 357777777643

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=97.30  E-value=0.0002  Score=59.76  Aligned_cols=98  Identities=14%  Similarity=-0.004  Sum_probs=61.0

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCc-chHHhhHHHHHHHHhc
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQM-DSREYLSRRRTILQKE  244 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~  244 (290)
                      ...++.|++.++++.++++ +++.++|+.+   +..+...|+..|+..+ +..+-.......| +...|+    +.++..
T Consensus        80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~----~~~~~~  151 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPSE-LRLGIVTSQR---RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLL----TALEKV  151 (209)
T ss_dssp             GGCEECTTHHHHHHHSCTT-SEEEEECSSC---HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHH----HHHHHT
T ss_pred             ccCCcCCCHHHHHHHHHhc-CcEEEEeCCC---HHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHH----HHHHHc
Confidence            3467889999999999999 9999999975   4566777888887533 3333222111122 122232    223333


Q ss_pred             C--CeEEEEeCCCcccccCCC-CcceEEEcc
Q 044563          245 G--FHITGLISNQMDALIGQS-LGKRVFKLP  272 (290)
Q Consensus       245 G--YrIv~~iGDq~sDl~G~~-~g~r~fkLP  272 (290)
                      |  ..=+..|||..+|+.+.. .|-+++...
T Consensus       152 ~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~  182 (209)
T 2hdo_A          152 NVAPQNALFIGDSVSDEQTAQAANVDFGLAV  182 (209)
T ss_dssp             TCCGGGEEEEESSHHHHHHHHHHTCEEEEEG
T ss_pred             CCCcccEEEECCChhhHHHHHHcCCeEEEEc
Confidence            3  223568999999998643 455555543

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.27  E-value=0.00096  Score=55.95  Aligned_cols=98  Identities=13%  Similarity=0.153  Sum_probs=61.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcC-
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEG-  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G-  245 (290)
                      ...+.|++.++++.+++. ++++++||.+   +......|+..|+..+ +.++.......+++.   ....+..++..| 
T Consensus       101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~---~~~~~~~~~~~g~  173 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGV---SHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPM---KEYFNYVFERIPQ  173 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEECSC---HHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTC---HHHHHHHHHTSTT
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCCC---HHHHHHHHHHcChHhhhheEEEecccCCCCCC---hHHHHHHHHHcCC
Confidence            357899999999999999 9999999976   3556677888887643 333333222222221   112223333334 


Q ss_pred             C--eEEEEeCCCc-ccccCC-CCcceEEEcc
Q 044563          246 F--HITGLISNQM-DALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 Y--rIv~~iGDq~-sDl~G~-~~g~r~fkLP  272 (290)
                      .  .=+..|||.. +|+.+. ..|-+++-+.
T Consensus       174 ~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~  204 (238)
T 3ed5_A          174 FSAEHTLIIGDSLTADIKGGQLAGLDTCWMN  204 (238)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHTTCEEEEEC
T ss_pred             CChhHeEEECCCcHHHHHHHHHCCCEEEEEC
Confidence            2  2257899998 999864 3465555553

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.24  E-value=0.00031  Score=59.52  Aligned_cols=114  Identities=11%  Similarity=0.092  Sum_probs=62.6

Q ss_pred             CCcEEEEecccccccChh-hhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSK-YSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y-~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      +-..||||+||||.+... +...  |. -...|.  +.++         ..++.|+++|+++.++||+ +    .+..-|
T Consensus         8 ~ikliv~D~DGtL~d~~~~~~~~--g~-~~~~f~--~~D~---------~~L~~Lk~~Gi~~~I~Tg~-~----~~~~~l   68 (168)
T 3ewi_A            8 EIKLLVCNIDGCLTNGHIYVSGD--QK-EIISYD--VKDA---------IGISLLKKSGIEVRLISER-A----CSKQTL   68 (168)
T ss_dssp             CCCEEEEECCCCCSCSCCBCCSS--CC-CEEEEE--HHHH---------HHHHHHHHTTCEEEEECSS-C----CCHHHH
T ss_pred             cCcEEEEeCccceECCcEEEcCC--CC-EEEEEe--cCcH---------HHHHHHHHCCCEEEEEeCc-H----HHHHHH
Confidence            345999999998777532 1111  10 001121  1111         1578999999999999999 3    344556


Q ss_pred             H--hCCCCCCCcceeecCcccCcchHHhhHHHHHHH-HhcC--CeEEEEeCCCcccccCCCCcceEEEccCC
Q 044563          208 I--SAGYRGWSSLIMRLDNEMQMDSREYLSRRRTIL-QKEG--FHITGLISNQMDALIGQSLGKRVFKLPNP  274 (290)
Q Consensus       208 ~--~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i-~~~G--YrIv~~iGDq~sDl~G~~~g~r~fkLPNP  274 (290)
                      +  ..|+.    .+. ...        .|...-+++ +..|  ..-++.|||...|+.......-.+-.+|.
T Consensus        69 ~~l~lgi~----~~~-g~~--------~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na  127 (168)
T 3ewi_A           69 SALKLDCK----TEV-SVS--------DKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADA  127 (168)
T ss_dssp             HTTCCCCC----EEC-SCS--------CHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTC
T ss_pred             HHhCCCcE----EEE-CCC--------ChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCCh
Confidence            6  44552    222 211        133332233 3333  23467899999999864322234555554

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.22  E-value=0.0011  Score=54.61  Aligned_cols=91  Identities=13%  Similarity=0.062  Sum_probs=52.4

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcc-cCc-----chHHhhH-HHHHH
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNE-MQM-----DSREYLS-RRRTI  240 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~-~~~-----~~~~yKs-~~R~~  240 (290)
                      .+..|++.++++.++++|+++.++|||...   .+...+...|+..+ ...+...++. .+.     ..-.-|- ..++.
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~  151 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDI---AVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI  151 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHH---HHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHH---HHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHH
Confidence            455689999999999999999999998743   33445666776422 1111111100 000     0001232 22333


Q ss_pred             HHhcCCeE--EEEeCCCcccccCC
Q 044563          241 LQKEGFHI--TGLISNQMDALIGQ  262 (290)
Q Consensus       241 i~~~GYrI--v~~iGDq~sDl~G~  262 (290)
                      ++..|...  +..+||..+|+...
T Consensus       152 ~~~lgi~~~~~~~iGD~~~Di~~~  175 (211)
T 1l7m_A          152 AKIEGINLEDTVAVGDGANDISMF  175 (211)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHcCCCHHHEEEEecChhHHHHH
Confidence            33334333  77999999999754

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.17  E-value=0.00046  Score=56.38  Aligned_cols=96  Identities=10%  Similarity=-0.086  Sum_probs=54.6

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC-cceeecCccc-CcchHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS-SLIMRLDNEM-QMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d-~LiLR~~~~~-~~~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.++++|++++++||........   . +..|+..+. .+........ .+....-|...-+++   .
T Consensus        77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l---~  149 (201)
T 4ap9_A           77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEP---F-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF---R  149 (201)
T ss_dssp             GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGG---G-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG---T
T ss_pred             hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH---H-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc---C
Confidence            35789999999999999999999999976543222   2 445654331 1111110000 000011244444444   3


Q ss_pred             CeEEEEeCCCcccccCCC-CcceEEE
Q 044563          246 FHITGLISNQMDALIGQS-LGKRVFK  270 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~~-~g~r~fk  270 (290)
                      ..-+..|||..+|+.... .|..+..
T Consensus       150 ~~~~i~iGD~~~Di~~~~~ag~~v~~  175 (201)
T 4ap9_A          150 DGFILAMGDGYADAKMFERADMGIAV  175 (201)
T ss_dssp             TSCEEEEECTTCCHHHHHHCSEEEEE
T ss_pred             cCcEEEEeCCHHHHHHHHhCCceEEE
Confidence            344557899999998642 3444333

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.13  E-value=0.001  Score=59.27  Aligned_cols=58  Identities=19%  Similarity=0.265  Sum_probs=43.0

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      ..+|+||+||||.+...                       .--+.+.+.+++++++|++|++.|||+....   .+-+..
T Consensus        21 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~---~~~~~~   74 (285)
T 3pgv_A           21 YQVVASDLDGTLLSPDH-----------------------FLTPYAKETLKLLTARGINFVFATGRHYIDV---GQIRDN   74 (285)
T ss_dssp             CCEEEEECCCCCSCTTS-----------------------CCCHHHHHHHHHHHTTTCEEEEECSSCGGGG---HHHHHH
T ss_pred             ceEEEEeCcCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHh
Confidence            46899999998887521                       1234678889999999999999999986533   344556


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        75 l~~~   78 (285)
T 3pgv_A           75 LGIR   78 (285)
T ss_dssp             HCSC
T ss_pred             cCCC
Confidence            6765

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=97.12  E-value=0.00089  Score=59.12  Aligned_cols=99  Identities=10%  Similarity=0.051  Sum_probs=62.6

Q ss_pred             cCcCcHHHHHHHHHHHhC-CCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVR-GWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.+++. |+++.++|+...   ......|+..|+..++.++-......+++ ...|+    ..++..|
T Consensus       112 ~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~---~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~----~~~~~lg  184 (275)
T 2qlt_A          112 HSIEVPGAVKLCNALNALPKEKWAVATSGTR---DMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYL----KGRNGLG  184 (275)
T ss_dssp             TCEECTTHHHHHHHHHTSCGGGEEEECSSCH---HHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHH----HHHHHTT
T ss_pred             CCCcCcCHHHHHHHHHhccCCeEEEEeCCCH---HHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHH----HHHHHcC
Confidence            356789999999999999 999999999764   44566777778754444443322122221 12232    2333333


Q ss_pred             C---------eEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          246 F---------HITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       246 Y---------rIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .         .=+..|||..+|+... ..|-+++.++.
T Consensus       185 i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~  222 (275)
T 2qlt_A          185 FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIAT  222 (275)
T ss_dssp             CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred             CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            2         2267899999999864 34666666554

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.11  E-value=0.00086  Score=58.13  Aligned_cols=45  Identities=18%  Similarity=0.356  Sum_probs=35.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ++|+||+||||.+...                       ...+.+.+.++.++++|++|+++|||+..
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~v~i~TGR~~~   48 (231)
T 1wr8_A            4 KAISIDIDGTITYPNR-----------------------MIHEKALEAIRRAESLGIPIMLVTGNTVQ   48 (231)
T ss_dssp             CEEEEESTTTTBCTTS-----------------------CBCHHHHHHHHHHHHTTCCEEEECSSCHH
T ss_pred             eEEEEECCCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChh
Confidence            5899999998887521                       11356788889999999999999999743

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=97.04  E-value=0.00059  Score=57.91  Aligned_cols=99  Identities=15%  Similarity=0.143  Sum_probs=64.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.|++.++++.|+++|++++++||.+.   . +...|+..|+..+ +.++...+...+|+..   ...+..+++.|.
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~---~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~---~~~~~~~~~~~~  165 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP---R-VKTLLEKFDLKKYFDALALSYEIKAVKPNP---KIFGFALAKVGY  165 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH---H-HHHHHHHHTCGGGCSEEC-----------C---CHHHHHHHHHCS
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH---H-HHHHHHhcCcHhHeeEEEeccccCCCCCCH---HHHHHHHHHcCC
Confidence            346889999999999999999999999853   2 5678888897543 4444332221122111   112334445576


Q ss_pred             eEEEEeCCCcc-cccCCC-CcceEEEccCC
Q 044563          247 HITGLISNQMD-ALIGQS-LGKRVFKLPNP  274 (290)
Q Consensus       247 rIv~~iGDq~s-Dl~G~~-~g~r~fkLPNP  274 (290)
                      .. ..|||... |+.+.. .|-+++-++..
T Consensus       166 ~~-~~vgD~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          166 PA-VHVGDIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             SE-EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             Ce-EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence            66 89999999 998764 57777777653

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=97.02  E-value=0.0011  Score=55.79  Aligned_cols=59  Identities=17%  Similarity=0.285  Sum_probs=42.3

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ++|+||+||||.++.                        ..++.+.++++.++++|+++++.|++.........+.|...
T Consensus         4 k~i~fDlDGTLl~~~------------------------~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~   59 (250)
T 2c4n_A            4 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATA   59 (250)
T ss_dssp             CEEEEECBTTTEETT------------------------EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHT
T ss_pred             cEEEEcCcceEEeCC------------------------EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHc
Confidence            599999999887642                        11223466788899999999999966655555566666667


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        60 g~~   62 (250)
T 2c4n_A           60 GVD   62 (250)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            764

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.02  E-value=0.001  Score=59.46  Aligned_cols=58  Identities=22%  Similarity=0.224  Sum_probs=41.8

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      +..|++|+||||.+...        .               ..+.+.+.+++|+++|++|++.|||+-.   ....-+..
T Consensus         9 ~~li~~DlDGTLl~~~~--------~---------------~~~~~~~~l~~l~~~G~~~~iaTGR~~~---~~~~~~~~   62 (275)
T 1xvi_A            9 PLLVFSDLDGTLLDSHS--------Y---------------DWQPAAPWLTRLREANVPVILCSSKTSA---EMLYLQKT   62 (275)
T ss_dssp             CEEEEEECTTTTSCSSC--------C---------------SCCTTHHHHHHHHHTTCCEEEECSSCHH---HHHHHHHH
T ss_pred             ceEEEEeCCCCCCCCCC--------c---------------CCHHHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHH
Confidence            45899999998887410        0               0123678899999999999999999843   33445566


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        63 l~~~   66 (275)
T 1xvi_A           63 LGLQ   66 (275)
T ss_dssp             TTCT
T ss_pred             cCCC
Confidence            6764

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.01  E-value=0.0013  Score=57.83  Aligned_cols=58  Identities=14%  Similarity=0.189  Sum_probs=36.7

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.++..                       .-.+.+.+.+++++++|+.+++.|||+..   ...+-+..
T Consensus         5 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~---~~~~~~~~   58 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN-----------------------ELAQATIDAVQAAKAQGIKVVLCTGRPLT---GVQPYLDA   58 (279)
T ss_dssp             CCEEEECC----------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH
T ss_pred             eEEEEEcCcCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHH
Confidence            35899999998877521                       11345778889999999999999999853   33555667


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        59 l~~~   62 (279)
T 3mpo_A           59 MDID   62 (279)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            7765

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=97.01  E-value=0.00094  Score=56.35  Aligned_cols=32  Identities=3%  Similarity=-0.168  Sum_probs=28.6

Q ss_pred             cCcCcHHHHHHHHHHHhC-CCeEEEecCCCccc
Q 044563          168 KHLKHMFTLKLFMKLQVR-GWPVILLSRKHEGQ  199 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e~~  199 (290)
                      ..++.||+.++++.|+++ |+++.++||++...
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~  105 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMF  105 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred             cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccch
Confidence            457899999999999999 99999999998654

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.00  E-value=0.0016  Score=56.86  Aligned_cols=46  Identities=20%  Similarity=0.252  Sum_probs=35.9

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~  199 (290)
                      ++|+||+||||.++..                       .--+.+.+.+++++++|+++++.|||+-..
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~~aTGR~~~~   49 (258)
T 2pq0_A            4 KIVFFDIDGTLLDEQK-----------------------QLPLSTIEAVRRLKQSGVYVAIATGRAPFM   49 (258)
T ss_dssp             CEEEECTBTTTBCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGG
T ss_pred             eEEEEeCCCCCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHH
Confidence            5899999998877521                       112457788899999999999999998543

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=96.95  E-value=0.0014  Score=58.58  Aligned_cols=57  Identities=12%  Similarity=0.142  Sum_probs=41.9

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..|+||+||||.+...                       ..-+.+++.+++++++|++|++.|||+-..   ...-+...
T Consensus         6 kli~~DlDGTLl~~~~-----------------------~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~---~~~~~~~l   59 (282)
T 1rkq_A            6 KLIAIDMDGTLLLPDH-----------------------TISPAVKNAIAAARARGVNVVLTTGRPYAG---VHNYLKEL   59 (282)
T ss_dssp             CEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGG---THHHHHHT
T ss_pred             eEEEEeCCCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHh
Confidence            5899999998887521                       122567888999999999999999998433   33445566


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        60 ~l~   62 (282)
T 1rkq_A           60 HME   62 (282)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            664

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=96.95  E-value=0.0011  Score=58.21  Aligned_cols=57  Identities=16%  Similarity=0.230  Sum_probs=41.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.++..                       .--+.+.+.+++++++|+.+++.|||+-.   ...+-+..
T Consensus         5 ~kli~fDlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~---~~~~~~~~   58 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK-----------------------EISSRNRETLIRIQEQGIRLVLASGRPTY---GIVPLANE   58 (279)
T ss_dssp             CCEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH
T ss_pred             ceEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChH---HHHHHHHH
Confidence            35999999998877521                       11256788899999999999999999843   23344556


Q ss_pred             CCC
Q 044563          210 AGY  212 (290)
Q Consensus       210 ~Gy  212 (290)
                      .|+
T Consensus        59 l~~   61 (279)
T 4dw8_A           59 LRM   61 (279)
T ss_dssp             TTG
T ss_pred             hCC
Confidence            665

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=96.95  E-value=0.001  Score=59.00  Aligned_cols=46  Identities=13%  Similarity=0.093  Sum_probs=36.7

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ...|+||+||||.+...                       ..-+.+.+.+++|+++|++|++.|||+-.
T Consensus         4 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~   49 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRL-----------------------CQTDEMRALIKRARGAGFCVGTVGGSDFA   49 (246)
T ss_dssp             SEEEEECSBTTTBSTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             ceEEEEeCcCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence            35899999998887521                       12256888899999999999999999854

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=96.93  E-value=0.0012  Score=57.58  Aligned_cols=57  Identities=14%  Similarity=0.146  Sum_probs=40.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ++|+||+||||.++..                       .--+.+.+.+++++++|+.+++.|||+...-   .+-+...
T Consensus         6 kli~fDlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~~   59 (274)
T 3fzq_A            6 KLLILDIDGTLRDEVY-----------------------GIPESAKHAIRLCQKNHCSVVICTGRSMGTI---QDDVLSL   59 (274)
T ss_dssp             CEEEECSBTTTBBTTT-----------------------BCCHHHHHHHHHHHHTTCEEEEECSSCTTTS---CHHHHTT
T ss_pred             eEEEEECCCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEeCCChHHH---HHHHHHc
Confidence            5999999998887521                       1124577888999999999999999985432   2234455


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        60 ~~~   62 (274)
T 3fzq_A           60 GVD   62 (274)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            553

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.92  E-value=0.0011  Score=57.85  Aligned_cols=57  Identities=19%  Similarity=0.212  Sum_probs=41.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..+++|+||||.+...                       ..-|.+.+.+++|+++|++|+++|||+...   ..+-++..
T Consensus         6 kli~~DlDGTLl~~~~-----------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~---~~~~~~~l   59 (227)
T 1l6r_A            6 RLAAIDVDGNLTDRDR-----------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPV---VYALKIFL   59 (227)
T ss_dssp             CEEEEEHHHHSBCTTS-----------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHH
T ss_pred             EEEEEECCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCcHH---HHHHHHHh
Confidence            5899999998887410                       112568889999999999999999998533   33344455


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        60 ~~~   62 (227)
T 1l6r_A           60 GIN   62 (227)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            654

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=96.91  E-value=0.0013  Score=58.58  Aligned_cols=48  Identities=15%  Similarity=0.181  Sum_probs=37.1

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ..+.|+||+||||.++..                      ..-.+.+.+.+++++++|+.|++.|||+..
T Consensus        20 ~~kli~~DlDGTLl~~~~----------------------~~i~~~~~~al~~l~~~G~~v~iaTGR~~~   67 (283)
T 3dao_A           20 MIKLIATDIDGTLVKDGS----------------------LLIDPEYMSVIDRLIDKGIIFVVCSGRQFS   67 (283)
T ss_dssp             CCCEEEECCBTTTBSTTC----------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             CceEEEEeCcCCCCCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            346999999998876521                      012356888899999999999999999853

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.89  E-value=0.0012  Score=57.60  Aligned_cols=47  Identities=17%  Similarity=0.342  Sum_probs=36.0

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      .++|+||+||||.+...                      ..--+.+.+.+++++++|+++++.|||+..
T Consensus        12 iKli~~DlDGTLl~~~~----------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~   58 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSFET----------------------HKVSQSSIDALKKVHDSGIKIVIATGRAAS   58 (268)
T ss_dssp             CCEEEECSBTTTBCTTT----------------------CSCCHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             eEEEEEeCCCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCChH
Confidence            36999999998887210                      011245778899999999999999999753

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=96.86  E-value=0.0014  Score=57.57  Aligned_cols=46  Identities=13%  Similarity=0.228  Sum_probs=35.7

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~  199 (290)
                      .+|+||+||||.+...       .               ..-+.+.+.++.++++|+.+++.|||+ ..
T Consensus         3 kli~~DlDGTLl~~~~-------~---------------~i~~~~~~al~~l~~~G~~~~iaTGR~-~~   48 (261)
T 2rbk_A            3 KALFFDIDGTLVSFET-------H---------------RIPSSTIEALEAAHAKGLKIFIATGRP-KA   48 (261)
T ss_dssp             CEEEECSBTTTBCTTT-------S---------------SCCHHHHHHHHHHHHTTCEEEEECSSC-GG
T ss_pred             cEEEEeCCCCCcCCCC-------C---------------cCCHHHHHHHHHHHHCCCEEEEECCCh-HH
Confidence            4899999998887521       0               012557788899999999999999998 54

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=96.79  E-value=0.0022  Score=54.95  Aligned_cols=64  Identities=16%  Similarity=0.153  Sum_probs=43.6

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.++.              |.      .....+.+.+..+.++++|+++.++|++.........+.|..
T Consensus        12 ~k~i~fDlDGTLl~s~--------------~~------~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~   71 (271)
T 2x4d_A           12 VRGVLLDISGVLYDSG--------------AG------GGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQR   71 (271)
T ss_dssp             CCEEEECCBTTTEECC--------------TT------TCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCeEEecC--------------CC------CCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHH
Confidence            4699999999887741              10      001234566678889999999999995554445555666666


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        72 ~g~~   75 (271)
T 2x4d_A           72 LGFD   75 (271)
T ss_dssp             TTCC
T ss_pred             CCCC
Confidence            6653

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.78  E-value=0.0018  Score=57.22  Aligned_cols=58  Identities=17%  Similarity=0.186  Sum_probs=42.6

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      .++|+||+||||.++..                       .-.+.+.+.++.++++|+.+++.|||+...-   ..-+..
T Consensus         6 ~kli~fDlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~   59 (290)
T 3dnp_A            6 KQLLALNIDGALLRSNG-----------------------KIHQATKDAIEYVKKKGIYVTLVTNRHFRSA---QKIAKS   59 (290)
T ss_dssp             CCEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHH---HHHHHH
T ss_pred             ceEEEEcCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHH
Confidence            35999999998887521                       1134578889999999999999999985332   344556


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        60 ~~~~   63 (290)
T 3dnp_A           60 LKLD   63 (290)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            6765

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.77  E-value=0.0018  Score=57.77  Aligned_cols=57  Identities=14%  Similarity=0.248  Sum_probs=40.9

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      .+|+||+||||.+...       ..                -+.+.+.+++++++|+.+++.|||+-.   ....-+...
T Consensus         5 kli~~DlDGTLl~~~~-------~i----------------~~~~~~al~~l~~~G~~~~iaTGR~~~---~~~~~~~~l   58 (288)
T 1nrw_A            5 KLIAIDLDGTLLNSKH-------QV----------------SLENENALRQAQRDGIEVVVSTGRAHF---DVMSIFEPL   58 (288)
T ss_dssp             CEEEEECCCCCSCTTS-------CC----------------CHHHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHGGG
T ss_pred             EEEEEeCCCCCCCCCC-------cc----------------CHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHc
Confidence            5899999998877521       11                245677888999999999999999843   233345556


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        59 ~~~   61 (288)
T 1nrw_A           59 GIK   61 (288)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            664

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=96.76  E-value=0.0014  Score=57.94  Aligned_cols=44  Identities=20%  Similarity=0.373  Sum_probs=34.2

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHH-HHHHHHHHhCCCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFT-LKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~-l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      +.|+||+||||.+...       ..                .+.+ .+.++.|+++|+.|++.|||+-
T Consensus         4 kli~~DlDGTLl~~~~-------~i----------------~~~~~~~al~~l~~~G~~~~iaTGR~~   48 (271)
T 1rlm_A            4 KVIVTDMDGTFLNDAK-------TY----------------NQPRFMAQYQELKKRGIKFVVASGNQY   48 (271)
T ss_dssp             CEEEECCCCCCSCTTS-------CC----------------CHHHHHHHHHHHHHHTCEEEEECSSCH
T ss_pred             cEEEEeCCCCCCCCCC-------cC----------------CHHHHHHHHHHHHHCCCEEEEEeCCcH
Confidence            5899999998887521       11                2333 7888999999999999999974

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=96.70  E-value=0.002  Score=57.94  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=34.9

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHH-HHHHHHHHHhCCCeEEEecCCCc
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMF-TLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~-~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      .++|+||+||||.++..                       .-.+. +.+.+++++++|+.+++.|||+.
T Consensus        37 iKli~fDlDGTLld~~~-----------------------~i~~~~~~~al~~l~~~G~~~~iaTGR~~   82 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSKG-----------------------SYDHNRFQRILKQLQERDIRFVVASSNPY   82 (304)
T ss_dssp             CSEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred             eEEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence            36999999998887521                       11234 56788999999999999999974

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=96.65  E-value=0.0031  Score=55.77  Aligned_cols=56  Identities=16%  Similarity=0.025  Sum_probs=39.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.|+||+||||.+...                       ..-+.+.+.+++ +++|++|++.|||+...   ...-+...
T Consensus         3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~---~~~~~~~l   55 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDNL-----------------------EISEKDRRNIEK-LSRKCYVVFASGRMLVS---TLNVEKKY   55 (268)
T ss_dssp             CEEEEECCCCCSCTTS-----------------------CCCHHHHHHHHH-HTTTSEEEEECSSCHHH---HHHHHHHH
T ss_pred             cEEEEeCCCcCCCCCC-----------------------ccCHHHHHHHHH-HhCCCEEEEECCCChHH---HHHHHHHh
Confidence            4899999998887421                       112457788888 99999999999998532   33344555


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        56 ~~~   58 (268)
T 1nf2_A           56 FKR   58 (268)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            653

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.54  E-value=0.0033  Score=57.12  Aligned_cols=45  Identities=11%  Similarity=0.158  Sum_probs=36.0

Q ss_pred             cEEEEecccccccC-hhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          131 DVVLMDIDDIFASS-SKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       131 ~AvVfDIDetLsn~-~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ..|+||+||||.+. ..                       ..-+.+++.+++|+++|+.|++.|||+-.
T Consensus        28 kli~~DlDGTLl~~~~~-----------------------~is~~~~~al~~l~~~Gi~v~iaTGR~~~   73 (301)
T 2b30_A           28 KLLLIDFDGTLFVDKDI-----------------------KVPSENIDAIKEAIEKGYMVSICTGRSKV   73 (301)
T ss_dssp             CEEEEETBTTTBCCTTT-----------------------CSCHHHHHHHHHHHHHTCEEEEECSSCHH
T ss_pred             cEEEEECCCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            59999999988874 11                       11256888999999999999999999843

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=96.53  E-value=0.0026  Score=58.25  Aligned_cols=43  Identities=16%  Similarity=0.057  Sum_probs=35.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR  213 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~  213 (290)
                      ..++.|++.++++.++++|+++.++||-.   +..+..-++..|+.
T Consensus       176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~---~~~~~~~~~~lgl~  218 (335)
T 3n28_A          176 TLPLMPELPELVATLHAFGWKVAIASGGF---TYFSDYLKEQLSLD  218 (335)
T ss_dssp             TCCCCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHHTCS
T ss_pred             hCCcCcCHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHHHcCCC
Confidence            45789999999999999999999999964   45566667778875

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.53  E-value=0.0031  Score=54.99  Aligned_cols=44  Identities=11%  Similarity=0.131  Sum_probs=34.8

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      +..|++|+||||.+...                       .--+.+++.+++|+++ ++|++.|||+-
T Consensus         6 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~-i~v~iaTGR~~   49 (246)
T 2amy_A            6 PALCLFDVDGTLTAPRQ-----------------------KITKEMDDFLQKLRQK-IKIGVVGGSDF   49 (246)
T ss_dssp             SEEEEEESBTTTBCTTS-----------------------CCCHHHHHHHHHHTTT-SEEEEECSSCH
T ss_pred             ceEEEEECCCCcCCCCc-----------------------ccCHHHHHHHHHHHhC-CeEEEEcCCCH
Confidence            46899999998887410                       1125688899999999 99999999973

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.40  E-value=0.004  Score=54.50  Aligned_cols=48  Identities=15%  Similarity=0.201  Sum_probs=35.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ..|++|+||||.+...         ++         .....-+.+++.+++|+++| .|++.|||+-
T Consensus         2 kli~~DlDGTLl~~~~---------~~---------~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~   49 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIM---------NP---------EESYADAGLLSLISDLKERF-DTYIVTGRSP   49 (239)
T ss_dssp             CEEEEECBTTTBCCCS---------CG---------GGCCCCHHHHHHHHHHHHHS-EEEEECSSCH
T ss_pred             eEEEEecCCCCcCCCC---------Cc---------ccCCCCHHHHHHHHHHhcCC-CEEEEeCCCH
Confidence            3789999998887410         00         01123467899999999999 9999999974

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.38  E-value=0.0021  Score=56.33  Aligned_cols=42  Identities=19%  Similarity=0.281  Sum_probs=32.5

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      .|+||+||||.+.. .                       -.+.+.+.++.++++|++|++.|||+-
T Consensus         2 li~~DlDGTLl~~~-~-----------------------i~~~~~~al~~l~~~Gi~v~iaTGR~~   43 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-G-----------------------ELGPAREALERLRALGVPVVPVTAKTR   43 (259)
T ss_dssp             EEEECCCCCCSCSS-S-----------------------SCSTTHHHHHHHHHTTCCEEEBCSSCH
T ss_pred             EEEEeCCCCCcCCC-c-----------------------CCHHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            68999999888752 1                       012356677889999999999999984

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.37  E-value=0.003  Score=55.49  Aligned_cols=55  Identities=15%  Similarity=0.186  Sum_probs=38.8

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ..|+||+||||. ..         ..               ++.+.+.+++++++|+++++.|||+..   ...+-+...
T Consensus         3 kli~~DlDGTLl-~~---------~~---------------~~~~~~~l~~l~~~g~~~~i~Tgr~~~---~~~~~~~~~   54 (249)
T 2zos_A            3 RLIFLDIDKTLI-PG---------YE---------------PDPAKPIIEELKDMGFEIIFNSSKTRA---EQEYYRKEL   54 (249)
T ss_dssp             EEEEECCSTTTC-TT---------SC---------------SGGGHHHHHHHHHTTEEEEEBCSSCHH---HHHHHHHHH
T ss_pred             cEEEEeCCCCcc-CC---------CC---------------cHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHc
Confidence            479999999777 31         00               123677889999999999999999843   233444555


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |++
T Consensus        55 ~~~   57 (249)
T 2zos_A           55 EVE   57 (249)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            664

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.16  E-value=0.0063  Score=53.80  Aligned_cols=45  Identities=13%  Similarity=0.144  Sum_probs=34.8

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ....|++|+||||.+...                       .--+.+.+.+++|+++ +.|++.|||+-
T Consensus        12 ~~kli~~DlDGTLl~~~~-----------------------~is~~~~~al~~l~~~-i~v~iaTGR~~   56 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQ-----------------------KIDPEVAAFLQKLRSR-VQIGVVGGSDY   56 (262)
T ss_dssp             -CEEEEEESBTTTBSTTS-----------------------CCCHHHHHHHHHHTTT-SEEEEECSSCH
T ss_pred             CeEEEEEeCccCCCCCCC-----------------------cCCHHHHHHHHHHHhC-CEEEEEcCCCH
Confidence            356999999998887410                       0125688899999999 99999999964

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=96.05  E-value=0.01  Score=53.08  Aligned_cols=98  Identities=7%  Similarity=0.030  Sum_probs=65.7

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      +..++.+|+|+++....                    ....++.|++.++++.|+++|+++.++||++.   ..+...|+
T Consensus       142 g~~~i~~~~d~~~~~~~--------------------~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~---~~~~~~l~  198 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGII--------------------AVSDTLKESAKPAVQELKRMGIKVGMITGDNW---RSAEAISR  198 (287)
T ss_dssp             TCEEEEEEETTEEEEEE--------------------EEECCBCTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHH
T ss_pred             CCeEEEEEECCEEEEEE--------------------EeccccchhHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHH
Confidence            45689999998433210                    01347789999999999999999999999874   44556677


Q ss_pred             hCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC
Q 044563          209 SAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       209 ~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~  262 (290)
                      ..|+..+ +.++  +         .-|...-+++...  .-+..|||..+|+...
T Consensus       199 ~~gl~~~f~~i~--~---------~~K~~~~~~l~~~--~~~~~vGDs~~Di~~a  240 (287)
T 3a1c_A          199 ELNLDLVIAEVL--P---------HQKSEEVKKLQAK--EVVAFVGDGINDAPAL  240 (287)
T ss_dssp             HHTCSEEECSCC--T---------TCHHHHHHHHTTT--CCEEEEECTTTCHHHH
T ss_pred             HhCCceeeeecC--h---------HHHHHHHHHHhcC--CeEEEEECCHHHHHHH
Confidence            7787532 2221  1         1233333444434  5567999999999764

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=95.94  E-value=0.021  Score=51.27  Aligned_cols=94  Identities=19%  Similarity=0.217  Sum_probs=60.8

Q ss_pred             HHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcce----eecCccc------------
Q 044563          163 CIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLI----MRLDNEM------------  226 (290)
Q Consensus       163 Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~Li----LR~~~~~------------  226 (290)
                      .+.....+..|++.++++.++++|++|+++||   ..+..+..-++.+|.......+    |..+++.            
T Consensus       134 ~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~  210 (297)
T 4fe3_A          134 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHV  210 (297)
T ss_dssp             HHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCT
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccch
Confidence            34445678899999999999999999999998   5677788888899975321111    1101100            


Q ss_pred             -CcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          227 -QMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       227 -~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                       .+....-|.....++.++|.+|+ .+||-.+|+.
T Consensus       211 ~~k~~~~~k~~~~~~~~~~~~~v~-~vGDGiNDa~  244 (297)
T 4fe3_A          211 FNKHDGALKNTDYFSQLKDNSNII-LLGDSQGDLR  244 (297)
T ss_dssp             TCHHHHHHTCHHHHHHTTTCCEEE-EEESSGGGGG
T ss_pred             hhcccHHHHHHHHHHhhccCCEEE-EEeCcHHHHH
Confidence             01111223334445556666666 5699999976

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=95.60  E-value=0.028  Score=46.80  Aligned_cols=103  Identities=12%  Similarity=0.004  Sum_probs=64.5

Q ss_pred             cCcCcHHHHHHHHHHHhC-CCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcC-
Q 044563          168 KHLKHMFTLKLFMKLQVR-GWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEG-  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~-Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G-  245 (290)
                      ..++.|++.++++.++++ |+++.++|+.+   +..+...|...|+..+-..+.-..+...+ ........++.++..| 
T Consensus        91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-~k~~~~~~~~~~~~lg~  166 (234)
T 2hcf_A           91 DITLLEGVRELLDALSSRSDVLLGLLTGNF---EASGRHKLKLPGIDHYFPFGAFADDALDR-NELPHIALERARRMTGA  166 (234)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSC---HHHHHHHHHTTTCSTTCSCEECTTTCSSG-GGHHHHHHHHHHHHHCC
T ss_pred             CCCcCCCHHHHHHHHHhCCCceEEEEcCCc---HHHHHHHHHHCCchhhcCcceecCCCcCc-cchHHHHHHHHHHHhCC
Confidence            346789999999999999 99999999975   45566778888876442222222221111 0011222233333334 


Q ss_pred             ---CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 ---FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 ---YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                         -.=+..|||..+|+.+. ..|-+++-+++.
T Consensus       167 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~  199 (234)
T 2hcf_A          167 NYSPSQIVIIGDTEHDIRCARELDARSIAVATG  199 (234)
T ss_dssp             CCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS
T ss_pred             CCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC
Confidence               22356899999999864 457777777664

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.45  E-value=0.012  Score=51.40  Aligned_cols=53  Identities=9%  Similarity=0.179  Sum_probs=35.6

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .|++|+||||.+...                        .++.+.+.+++++ .|++|++.|||+-.   ...+-+...|
T Consensus         5 li~~DlDGTLl~~~~------------------------~~~~~~~~l~~~~-~gi~v~iaTGR~~~---~~~~~~~~l~   56 (244)
T 1s2o_A            5 LLISDLDNTWVGDQQ------------------------ALEHLQEYLGDRR-GNFYLAYATGRSYH---SARELQKQVG   56 (244)
T ss_dssp             EEEECTBTTTBSCHH------------------------HHHHHHHHHHTTG-GGEEEEEECSSCHH---HHHHHHHHHT
T ss_pred             EEEEeCCCCCcCCHH------------------------HHHHHHHHHHHhc-CCCEEEEEcCCCHH---HHHHHHHHcC
Confidence            799999998887420                        0134566677755 68999999999743   2334445555


Q ss_pred             C
Q 044563          212 Y  212 (290)
Q Consensus       212 y  212 (290)
                      +
T Consensus        57 l   57 (244)
T 1s2o_A           57 L   57 (244)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=95.45  E-value=0.013  Score=49.12  Aligned_cols=96  Identities=9%  Similarity=0.119  Sum_probs=63.3

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.|++.++++.|++ |+++.++||.+   +..+.+.|+..|+..+ +.++-..  ...++.   ...-+..++..|..
T Consensus        83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~---~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~---p~~~~~~~~~lg~~  153 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSS-SYPLYITTTKD---TSTAQDMAKNLEIHHFFDGIYGSS--PEAPHK---ADVIHQALQTHQLA  153 (210)
T ss_dssp             CEECTTHHHHHHHHHT-TSCEEEEEEEE---HHHHHHHHHHTTCGGGCSEEEEEC--SSCCSH---HHHHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHHHc-CCeEEEEeCCC---HHHHHHHHHhcCchhheeeeecCC--CCCCCC---hHHHHHHHHHcCCC
Confidence            4678999999999999 99999999865   3445667888898654 4444333  222321   12223344444543


Q ss_pred             E--EEEeCCCcccccCC-CCcceEEEccC
Q 044563          248 I--TGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       248 I--v~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .  +..|||...|+.+. ..|-+++-++.
T Consensus       154 p~~~~~vgDs~~Di~~a~~aG~~~i~v~~  182 (210)
T 2ah5_A          154 PEQAIIIGDTKFDMLGARETGIQKLAITW  182 (210)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred             cccEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence            2  56899999999875 34666666654

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=95.44  E-value=0.015  Score=49.74  Aligned_cols=99  Identities=11%  Similarity=-0.029  Sum_probs=62.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      ..++.|++.++++.|+++|+++.++||.+.   ..+...|+..|+..++.++-......+++ ...|+..    ++..|.
T Consensus       108 ~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~----~~~l~~  180 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKGVKLAVVSNKPN---EAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSEC----VKVLGV  180 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHH----HHHHTC
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHH----HHHcCC
Confidence            346789999999999999999999999653   45666777778642344443322222222 2223322    222232


Q ss_pred             e--EEEEeCCCcccccCC-CCcceEEEccC
Q 044563          247 H--ITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 r--Iv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      .  =+..|||...|+.+. ..|-+++-+++
T Consensus       181 ~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~  210 (240)
T 2hi0_A          181 PRDKCVYIGDSEIDIQTARNSEMDEIAVNW  210 (240)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred             CHHHeEEEcCCHHHHHHHHHCCCeEEEECC
Confidence            1  256899999999864 34666666654

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=95.43  E-value=0.029  Score=47.60  Aligned_cols=98  Identities=8%  Similarity=0.143  Sum_probs=63.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      .++.|++.++++.++++|++++++|+.+   +..+...|...|+..+ +.++.......+++ ...|+    ..++..|.
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~~g~  165 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGN---PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFK----KALKAFNV  165 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSC---HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHH----HHHHHHTC
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCC---chhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHH----HHHHHcCC
Confidence            4578999999999999999999999965   4456678888897643 44443322222222 12232    22333332


Q ss_pred             --eEEEEeCCCc-ccccCC-CCcceEEEccC
Q 044563          247 --HITGLISNQM-DALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 --rIv~~iGDq~-sDl~G~-~~g~r~fkLPN  273 (290)
                        .=+..|||.. +|+.+. ..|-+++.++.
T Consensus       166 ~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~  196 (241)
T 2hoq_A          166 KPEEALMVGDRLYSDIYGAKRVGMKTVWFRY  196 (241)
T ss_dssp             CGGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred             CcccEEEECCCchHhHHHHHHCCCEEEEECC
Confidence              2256999998 999864 35666666643

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=95.26  E-value=0.058  Score=47.63  Aligned_cols=63  Identities=8%  Similarity=0.053  Sum_probs=40.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHH-HHhCCCeEEEecCCCccchHHHHHHHH
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMK-LQVRGWPVILLSRKHEGQRNATTELLI  208 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~-l~~~Gv~V~~iSgR~e~~r~~T~~NL~  208 (290)
                      ..+|+||+||||.++-         -    +.+     ...++....+.++. +++.|++++++|||+..   ...+.|.
T Consensus        22 ~kliifDlDGTLlds~---------i----~~~-----~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~---~~~~~~~   80 (289)
T 3gyg_A           22 QYIVFCDFDETYFPHT---------I----DEQ-----KQQDIYELEDYLEQKSKDGELIIGWVTGSSIE---SILDKMG   80 (289)
T ss_dssp             SEEEEEETBTTTBCSS---------C----CHH-----HHHHHHHHHHHHHHHHHTTCEEEEEECSSCHH---HHHHHHH
T ss_pred             CeEEEEECCCCCcCCC---------C----Ccc-----hHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHH---HHHHHHH
Confidence            4699999999888752         0    100     11223333444444 47899999999999853   4455666


Q ss_pred             hCCCC
Q 044563          209 SAGYR  213 (290)
Q Consensus       209 ~~Gy~  213 (290)
                      ..|++
T Consensus        81 ~~g~~   85 (289)
T 3gyg_A           81 RGKFR   85 (289)
T ss_dssp             HTTCC
T ss_pred             hhccC
Confidence            77774

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=94.97  E-value=0.11  Score=46.19  Aligned_cols=94  Identities=12%  Similarity=0.053  Sum_probs=56.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC--C-------------CCCC-CcceeecCcccCcchHH
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA--G-------------YRGW-SSLIMRLDNEMQMDSRE  232 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~--G-------------y~~~-d~LiLR~~~~~~~~~~~  232 (290)
                      .++.|++.++++.    |+++.++||-+   +..+...|...  |             |..+ +. .+-  + ..++.-.
T Consensus       124 ~~~~pgv~e~L~~----g~~l~i~Tn~~---~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~--g-~KP~p~~  192 (253)
T 2g80_A          124 APVYADAIDFIKR----KKRVFIYSSGS---VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTS--G-KKTETQS  192 (253)
T ss_dssp             BCCCHHHHHHHHH----CSCEEEECSSC---HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHH--C-CTTCHHH
T ss_pred             CCCCCCHHHHHHc----CCEEEEEeCCC---HHHHHHHHHhhcccccccccccchHhhcceEEee-ecc--C-CCCCHHH
Confidence            4678999999988    99999999976   44566667766  5             3221 11 110  1 1222233


Q ss_pred             hhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEEccCCc
Q 044563          233 YLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFKLPNPL  275 (290)
Q Consensus       233 yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNPm  275 (290)
                      |....+ ++--..-++ ..|||...|+.+. ..|-+++-+..+-
T Consensus       193 ~~~a~~-~lg~~p~~~-l~vgDs~~di~aA~~aG~~~i~v~~~~  234 (253)
T 2g80_A          193 YANILR-DIGAKASEV-LFLSDNPLELDAAAGVGIATGLASRPG  234 (253)
T ss_dssp             HHHHHH-HHTCCGGGE-EEEESCHHHHHHHHTTTCEEEEECCTT
T ss_pred             HHHHHH-HcCCCcccE-EEEcCCHHHHHHHHHcCCEEEEEcCCC
Confidence            443322 221112344 5899999999864 4577887775543

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=94.94  E-value=0.064  Score=51.11  Aligned_cols=87  Identities=10%  Similarity=0.059  Sum_probs=53.6

Q ss_pred             CcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC-C--CCc-----ceeecCc--------ccCcchHHhh
Q 044563          171 KHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR-G--WSS-----LIMRLDN--------EMQMDSREYL  234 (290)
Q Consensus       171 aip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~-~--~d~-----LiLR~~~--------~~~~~~~~yK  234 (290)
                      ..|++++|+++|+++|++|++|||=   .+..+.......||. +  -++     |....++        ......-.-|
T Consensus       222 ~~p~~~eLi~~L~~~G~~v~IVSgg---~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK  298 (385)
T 4gxt_A          222 TLDEMVDLYRSLEENGIDCYIVSAS---FIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGK  298 (385)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHH
T ss_pred             eCHHHHHHHHHHHHCCCeEEEEcCC---cHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCch
Confidence            3799999999999999999999994   456677777777752 1  122     2222111        0011111224


Q ss_pred             HHHHHHHHh--cCCeEEEEeCCCccccc
Q 044563          235 SRRRTILQK--EGFHITGLISNQMDALI  260 (290)
Q Consensus       235 s~~R~~i~~--~GYrIv~~iGDq~sDl~  260 (290)
                      ...-+++.+  .|++-+..+||-.+|+.
T Consensus       299 ~~~i~~~~~~~~~~~~i~a~GDs~~D~~  326 (385)
T 4gxt_A          299 VQTINKLIKNDRNYGPIMVGGDSDGDFA  326 (385)
T ss_dssp             HHHHHHHTCCTTEECCSEEEECSGGGHH
T ss_pred             HHHHHHHHHhcCCCCcEEEEECCHhHHH
Confidence            333233322  36676778899999984

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=94.63  E-value=0.047  Score=45.17  Aligned_cols=101  Identities=12%  Similarity=0.040  Sum_probs=63.3

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC-
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF-  246 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY-  246 (290)
                      .+.|++.++++.++++|+++.++|+..-..+..+...|+..|+..+ +.++........++ ...|    +..++..|. 
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~----~~~~~~lgi~  174 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMF----EKVLNSFEVK  174 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHH----HHHHHHTTCC
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHH----HHHHHHcCCC
Confidence            4589999999999999999999999761114556778888887643 44433221111221 1222    233333342 


Q ss_pred             -eEEEEeCCCc-ccccCC-CCcceEEEccCC
Q 044563          247 -HITGLISNQM-DALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       247 -rIv~~iGDq~-sDl~G~-~~g~r~fkLPNP  274 (290)
                       .=+..|||.. +|+.+. ..|-+++.++..
T Consensus       175 ~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~  205 (235)
T 2om6_A          175 PEESLHIGDTYAEDYQGARKVGMWAVWINQE  205 (235)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTSEEEEECTT
T ss_pred             ccceEEECCChHHHHHHHHHCCCEEEEECCC
Confidence             2256899999 999864 346666666543

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=94.41  E-value=0.03  Score=49.53  Aligned_cols=100  Identities=11%  Similarity=-0.029  Sum_probs=60.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh---CCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS---AGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQ  242 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~---~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~  242 (290)
                      ..++.|++.++++.|+++|++++++||-+..   ....-|+.   .|+..+ +.++-. +-. +|. ...|....+ ++-
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~---~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~-~lg  201 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVE---AQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIAD-SIG  201 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHH-HHT
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHH---HHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHH-HhC
Confidence            3578899999999999999999999997643   33344553   345432 333322 212 332 223433222 221


Q ss_pred             hcCCeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          243 KEGFHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       243 ~~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -..-+ +..|||...|+.+. ..|-+++-++.+
T Consensus       202 ~~p~~-~l~VgDs~~di~aA~~aG~~~i~v~~~  233 (261)
T 1yns_A          202 CSTNN-ILFLTDVTREASAAEEADVHVAVVVRP  233 (261)
T ss_dssp             SCGGG-EEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred             cCccc-EEEEcCCHHHHHHHHHCCCEEEEEeCC
Confidence            12223 45899999999865 357777777543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=92.96  E-value=0.01  Score=52.76  Aligned_cols=80  Identities=19%  Similarity=0.177  Sum_probs=54.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      .+++.|++.++++.|+++|+++.++||.++.   ....-++..|+..+ +.++  + .        .|...-+++..++.
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~---~~~~~~~~~gl~~~f~~~~--p-~--------~k~~~~~~l~~~~~  199 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKED---KVKELSKELNIQEYYSNLS--P-E--------DKVRIIEKLKQNGN  199 (263)
Confidence            4678899999999999999999999997643   34455666677533 2222  1 1        23333344444444


Q ss_pred             eEEEEeCCCcccccCC
Q 044563          247 HITGLISNQMDALIGQ  262 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~  262 (290)
                       -+.+|||..+|+...
T Consensus       200 -~~~~VGD~~~D~~aa  214 (263)
T 2yj3_A          200 -KVLMIGDGVNDAAAL  214 (263)
Confidence             456999999999864

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=93.86  E-value=0.15  Score=54.29  Aligned_cols=30  Identities=17%  Similarity=0.202  Sum_probs=28.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      .+|+-|++.+.++.++++|++|+++|||+.
T Consensus       602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~  631 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHP  631 (1034)
T ss_pred             cCCCchhHHHHHHHHHHcCCeEEEEeCCCH
Confidence            578999999999999999999999999974

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=93.82  E-value=0.11  Score=55.52  Aligned_cols=31  Identities=16%  Similarity=0.071  Sum_probs=28.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      .+|+-|++.+.++.++++|++|+++|||...
T Consensus       597 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~  627 (1028)
T 2zxe_A          597 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI  627 (1028)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             CCCCChhHHHHHHHHHHcCCEEEEECCCCHH
Confidence            5788999999999999999999999999753

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=93.82  E-value=0.032  Score=53.28  Aligned_cols=99  Identities=10%  Similarity=0.076  Sum_probs=63.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-C--cceeecCcc-----------cCc-chHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-S--SLIMRLDNE-----------MQM-DSRE  232 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d--~LiLR~~~~-----------~~~-~~~~  232 (290)
                      ..++.||+.++++.|+++|+++.++||.+   +..+..-|+..|+..+ +  .++-..+..           .+| +.-.
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~---~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~  289 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRP---YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFS  289 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHH
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCc---HHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHH
Confidence            45789999999999999999999999986   4456667777887543 4  333211100           022 2222


Q ss_pred             hhHHHHHHHHhcC-----------------CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          233 YLSRRRTILQKEG-----------------FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       233 yKs~~R~~i~~~G-----------------YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      |..    .++..|                 -+ +.+|||...|+.+. ..|-+++-++.+
T Consensus       290 ~~~----a~~~lg~~~~~~~~~~~~~~v~p~e-~l~VGDs~~Di~aAk~AG~~~I~V~~g  344 (384)
T 1qyi_A          290 YIA----ALYGNNRDKYESYINKQDNIVNKDD-VFIVGDSLADLLSAQKIGATFIGTLTG  344 (384)
T ss_dssp             HHH----HHHCCCGGGHHHHHHCCTTCSCTTT-EEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred             HHH----HHHHcCCccccccccccccCCCCcC-eEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            332    222212                 23 45899999999764 357777777664

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=93.77  E-value=0.059  Score=50.33  Aligned_cols=28  Identities=29%  Similarity=0.284  Sum_probs=25.2

Q ss_pred             CcHHHHHHHHHHHhCCCeEEEecCCCcc
Q 044563          171 KHMFTLKLFMKLQVRGWPVILLSRKHEG  198 (290)
Q Consensus       171 aip~~l~l~~~l~~~Gv~V~~iSgR~e~  198 (290)
                      ..|++++|+++++++|++|++||+=.+.
T Consensus       144 ~~~~~~~l~~~l~~~G~~v~ivSas~~~  171 (327)
T 4as2_A          144 VFSGQRELYNKLMENGIEVYVISAAHEE  171 (327)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEHH
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCcHH
Confidence            5799999999999999999999996543

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=93.76  E-value=0.061  Score=44.16  Aligned_cols=94  Identities=11%  Similarity=0.054  Sum_probs=57.0

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcCC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEGF  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~GY  246 (290)
                      ..+.|++.++++.+++.|+++.++|+. +    .....|...|+..+ +..+........++ ...|+    ..++..|.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~----~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~----~~~~~lgi  160 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS-K----NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFI----AAAHAVGV  160 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC-T----THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHH----HHHHHTTC
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc-H----HHHHHHHHcChHHHcceEeccccCCCCCCChHHHH----HHHHHcCC
Confidence            467899999999999999999999998 2    23456777787543 33322211112221 11232    23333332


Q ss_pred             --eEEEEeCCCcccccCCC-CcceEEEc
Q 044563          247 --HITGLISNQMDALIGQS-LGKRVFKL  271 (290)
Q Consensus       247 --rIv~~iGDq~sDl~G~~-~g~r~fkL  271 (290)
                        .=+..|||..+|+.+.. .|-++...
T Consensus       161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~  188 (221)
T 2wf7_A          161 APSESIGLEDSQAGIQAIKDSGALPIGV  188 (221)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred             ChhHeEEEeCCHHHHHHHHHCCCEEEEE
Confidence              22568899999998642 35555544

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=93.65  E-value=0.12  Score=52.26  Aligned_cols=78  Identities=9%  Similarity=0.049  Sum_probs=56.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.-|++.+.++.|+++|++|+++|||++.   .+.+-.++.|..   ..+.+-..       +-|...-++++++  +
T Consensus       455 ~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~---~a~~ia~~lgi~---~~~~~~~P-------~~K~~~v~~l~~~--~  519 (645)
T 3j08_A          455 SDTLKESAKPAVQELKRMGIKVGMITGDNWR---SAEAISRELNLD---LVIAEVLP-------HQKSEEVKKLQAK--E  519 (645)
T ss_dssp             ECCCTTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHHTCS---EEECSCCT-------TCHHHHHHHHTTT--C
T ss_pred             cCCchhHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHcCCC---EEEEeCCH-------HhHHHHHHHHhhC--C
Confidence            4567799999999999999999999999853   333444566774   33333221       1365666667655  7


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      .++.+||..+|..
T Consensus       520 ~v~~vGDg~ND~~  532 (645)
T 3j08_A          520 VVAFVGDGINDAP  532 (645)
T ss_dssp             CEEEEECSSSCHH
T ss_pred             eEEEEeCCHhHHH
Confidence            8999999999975

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=93.34  E-value=0.12  Score=53.35  Aligned_cols=79  Identities=15%  Similarity=0.235  Sum_probs=56.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.-|++.+.++.|+++|++|+++|||...   ....-.++.|+.   +.+.+-.       .+-|.+.-++++++|. 
T Consensus       552 ~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~---~a~~ia~~lgi~---~v~a~~~-------P~~K~~~v~~l~~~g~-  617 (736)
T 3rfu_A          552 EDPIKSSTPETILELQQSGIEIVMLTGDSKR---TAEAVAGTLGIK---KVVAEIM-------PEDKSRIVSELKDKGL-  617 (736)
T ss_dssp             ECCBCSSHHHHHHHHHHHTCEEEEECSSCHH---HHHHHHHHHTCC---CEECSCC-------HHHHHHHHHHHHHHSC-
T ss_pred             eccchhhHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCCC---EEEEecC-------HHHHHHHHHHHHhcCC-
Confidence            4667789999999999999999999999853   233334566875   3333321       1357777777877765 


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      +++.+||..+|..
T Consensus       618 ~V~~vGDG~ND~p  630 (736)
T 3rfu_A          618 IVAMAGDGVNDAP  630 (736)
T ss_dssp             CEEEEECSSTTHH
T ss_pred             EEEEEECChHhHH
Confidence            5779999999975

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=93.20  E-value=0.012  Score=49.98  Aligned_cols=127  Identities=11%  Similarity=0.066  Sum_probs=68.6

Q ss_pred             CCCCcEEEEecccccccChhhhhhccCCCC-ccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHH
Q 044563          127 YNGLDVVLMDIDDIFASSSKYSNLLIDRVN-VRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTE  205 (290)
Q Consensus       127 ~~g~~AvVfDIDetLsn~~y~~~~~~G~~~-~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~  205 (290)
                      ..+|..+|+|+||||-.+....... ..+. +...+.....-.-...||+.+|++++.+. ++|++.|+-....-+.-++
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~~~-~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~   89 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPVNN-ADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVAD   89 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCSS-CSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHH
T ss_pred             cCCCeEEEECCCCCeECCcccCCCC-ccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHH
Confidence            3567899999999776653211000 0000 00000000001235689999999999998 9999999987655444444


Q ss_pred             HHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe--EEEEeCCCcccccCCC
Q 044563          206 LLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH--ITGLISNQMDALIGQS  263 (290)
Q Consensus       206 NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr--Iv~~iGDq~sDl~G~~  263 (290)
                      .|--.|+  .+..+.|..-...+ ..-.|     .+..-|..  =+..|||...++....
T Consensus        90 ~ld~~~~--f~~~~~rd~~~~~k-~~~~k-----~L~~Lg~~~~~~vivdDs~~~~~~~~  141 (181)
T 2ght_A           90 LLDKWGA--FRARLFRESCVFHR-GNYVK-----DLSRLGRDLRRVLILDNSPASYVFHP  141 (181)
T ss_dssp             HHCTTCC--EEEEECGGGSEEET-TEEEC-----CGGGTCSCGGGEEEECSCGGGGTTCT
T ss_pred             HHCCCCc--EEEEEeccCceecC-CcEec-----cHHHhCCCcceEEEEeCCHHHhccCc
Confidence            4433332  23444453322111 11122     22223332  2568999999997543

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=93.17  E-value=0.16  Score=52.06  Aligned_cols=78  Identities=9%  Similarity=0.049  Sum_probs=56.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      .++.-|++.+.++.|+++|++|+++|||+..   .+..-.++.|+.   ..+.+-..       +-|...-++++++  +
T Consensus       533 ~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~---~a~~ia~~lgi~---~~~~~~~P-------~~K~~~v~~l~~~--~  597 (723)
T 3j09_A          533 SDTLKESAKPAVQELKRMGIKVGMITGDNWR---SAEAISRELNLD---LVIAEVLP-------HQKSEEVKKLQAK--E  597 (723)
T ss_dssp             ECCSCTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHHTCS---EEECSCCT-------TCHHHHHHHHTTT--C
T ss_pred             cCCcchhHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCc---EEEccCCH-------HHHHHHHHHHhcC--C
Confidence            4677899999999999999999999999843   233334566774   33333221       1366666677655  7


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      .++.+||..+|..
T Consensus       598 ~v~~vGDg~ND~~  610 (723)
T 3j09_A          598 VVAFVGDGINDAP  610 (723)
T ss_dssp             CEEEEECSSTTHH
T ss_pred             eEEEEECChhhHH
Confidence            8899999999975

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=93.10  E-value=0.22  Score=52.80  Aligned_cols=89  Identities=12%  Similarity=0.035  Sum_probs=57.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC----cceeecCcccC----------------
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS----SLIMRLDNEMQ----------------  227 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d----~LiLR~~~~~~----------------  227 (290)
                      .+|+-|++.+.++.|+++|++|+++||+...   .+.+-.++.|+...+    ...+-++.-..                
T Consensus       601 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~---ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~  677 (995)
T 3ar4_A          601 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKG---TAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCF  677 (995)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEE
T ss_pred             cCCCchhHHHHHHHHHHcCCEEEEECCCCHH---HHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEE
Confidence            5788899999999999999999999998743   223334456775321    11111100000                


Q ss_pred             -cchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          228 -MDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       228 -~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                       .-..+-|...=+.++++| .+++.+||-.+|..
T Consensus       678 ~r~~P~~K~~~v~~l~~~g-~~v~~~GDG~ND~~  710 (995)
T 3ar4_A          678 ARVEPSHKSKIVEYLQSYD-EITAMTGDGVNDAP  710 (995)
T ss_dssp             ESCCSSHHHHHHHHHHTTT-CCEEEEECSGGGHH
T ss_pred             EEeCHHHHHHHHHHHHHCC-CEEEEEcCCchhHH
Confidence             000125666667787777 57889999999985

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=92.90  E-value=0.19  Score=42.73  Aligned_cols=93  Identities=11%  Similarity=0.130  Sum_probs=60.4

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC-
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF-  246 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY-  246 (290)
                      .++.|++.++++.++ .|+++.++|+.+   +..+...|...|+..+ +.++...+    ++...|+.    .++..|. 
T Consensus       111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~i~~~~k----p~~~~~~~----~~~~l~~~  178 (251)
T 2pke_A          111 VEVIAGVREAVAAIA-ADYAVVLITKGD---LFHQEQKIEQSGLSDLFPRIEVVSE----KDPQTYAR----VLSEFDLP  178 (251)
T ss_dssp             CCBCTTHHHHHHHHH-TTSEEEEEEESC---HHHHHHHHHHHSGGGTCCCEEEESC----CSHHHHHH----HHHHHTCC
T ss_pred             CCcCccHHHHHHHHH-CCCEEEEEeCCC---HHHHHHHHHHcCcHHhCceeeeeCC----CCHHHHHH----HHHHhCcC
Confidence            567899999999999 999999999976   3455667777786543 44444321    11222332    2222232 


Q ss_pred             -eEEEEeCCCc-ccccCC-CCcceEEEccC
Q 044563          247 -HITGLISNQM-DALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       247 -rIv~~iGDq~-sDl~G~-~~g~r~fkLPN  273 (290)
                       .=+..|||.. +|+.+. ..|-+++-+++
T Consensus       179 ~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~  208 (251)
T 2pke_A          179 AERFVMIGNSLRSDVEPVLAIGGWGIYTPY  208 (251)
T ss_dssp             GGGEEEEESCCCCCCHHHHHTTCEEEECCC
T ss_pred             chhEEEECCCchhhHHHHHHCCCEEEEECC
Confidence             2356899999 999864 34666666654

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=92.54  E-value=0.017  Score=49.91  Aligned_cols=125  Identities=13%  Similarity=0.076  Sum_probs=67.3

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCC-ccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVN-VRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTEL  206 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~-~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~N  206 (290)
                      .+|..+|||+||||-.+........ .+. +...+.-...-.-...||+.+|++++.+. ++|++.|+-....-+   .-
T Consensus        26 ~~k~~LVLDLD~TLvhs~~~~~~~~-d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~---~v  100 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSSFKPISNA-DFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYAD---PV  100 (195)
T ss_dssp             TTCCEEEECCBTTTEEEESSCCTTC-SEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHH---HH
T ss_pred             CCCeEEEEccccceEcccccCCCCc-cceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHH---HH
Confidence            5678999999997766532100000 000 00000000001235679999999999998 999999997754444   44


Q ss_pred             HHhCCCCC-CCcceeecCcccCcchHHhhHHHHHHHHhcCCe--EEEEeCCCcccccCCC
Q 044563          207 LISAGYRG-WSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH--ITGLISNQMDALIGQS  263 (290)
Q Consensus       207 L~~~Gy~~-~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr--Iv~~iGDq~sDl~G~~  263 (290)
                      |...|..+ ++..+.|..-...+ ..-.|     .+..-|..  =+.+|||...++....
T Consensus       101 l~~ld~~~~f~~~l~rd~~~~~k-~~~lK-----~L~~Lg~~~~~~vivDDs~~~~~~~~  154 (195)
T 2hhl_A          101 ADLLDRWGVFRARLFRESCVFHR-GNYVK-----DLSRLGRELSKVIIVDNSPASYIFHP  154 (195)
T ss_dssp             HHHHCCSSCEEEEECGGGCEEET-TEEEC-----CGGGSSSCGGGEEEEESCGGGGTTCG
T ss_pred             HHHhCCcccEEEEEEcccceecC-Cceee-----eHhHhCCChhHEEEEECCHHHhhhCc
Confidence            44445432 23444453322111 11122     22333432  2568999999997653

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=92.36  E-value=0.13  Score=49.07  Aligned_cols=40  Identities=5%  Similarity=0.083  Sum_probs=32.9

Q ss_pred             CcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          171 KHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       171 aip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .-|++.+|++++. .+++|++-|.-....-+.-++.|.-.|
T Consensus        76 ~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~  115 (372)
T 3ef0_A           76 FRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTG  115 (372)
T ss_dssp             ECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTS
T ss_pred             ECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCC
Confidence            4689999999998 789999999987776677777776555

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=92.31  E-value=0.27  Score=52.10  Aligned_cols=89  Identities=13%  Similarity=0.066  Sum_probs=58.1

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC----CCcceeecCc---------------ccCc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG----WSSLIMRLDN---------------EMQM  228 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~----~d~LiLR~~~---------------~~~~  228 (290)
                      .+|+-|++.+.++.+++.|++|+.|||.....-.+..   ++.|...    -+.+.+-+.+               --..
T Consensus       533 ~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA---~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~ar  609 (920)
T 1mhs_A          533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS---RQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAE  609 (920)
T ss_dssp             CCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH---HHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEES
T ss_pred             eccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHH---HHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEE
Confidence            4789999999999999999999999998754332222   3447642    1122111100               0000


Q ss_pred             chHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          229 DSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       229 ~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      -..+-|...=+.++++| ++++.+||-.+|..
T Consensus       610 v~P~~K~~iV~~Lq~~g-~~Vam~GDGvNDap  640 (920)
T 1mhs_A          610 VFPQHKYNVVEILQQRG-YLVAMTGDGVNDAP  640 (920)
T ss_dssp             CCSTHHHHHHHHHHTTT-CCCEECCCCGGGHH
T ss_pred             eCHHHHHHHHHHHHhCC-CeEEEEcCCcccHH
Confidence            11235777777888887 57889999999975

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=90.17  E-value=0.48  Score=44.17  Aligned_cols=102  Identities=13%  Similarity=0.195  Sum_probs=64.3

Q ss_pred             hhhhHHHHHHHHHHHHHHH-hhhCCCCCCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHH
Q 044563          102 EGQFARDLNLSIQIVESYF-NTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFM  180 (290)
Q Consensus       102 sgqY~~D~~~v~~~A~~y~-~~~~~~~~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~  180 (290)
                      ...|.+.+.   .....|- .-+.+...++..+|+|+||||-....         ....|.       --.-|++-+|++
T Consensus       114 ~~~~~~~~~---~~~~~~~~~~~~p~~~~k~tLVLDLDeTLvh~~~---------~~~~~~-------~~~RP~l~eFL~  174 (320)
T 3shq_A          114 SAVYLAKVQ---RRVRDYKIKELAPPREGKKLLVLDIDYTLFDHRS---------PAETGT-------ELMRPYLHEFLT  174 (320)
T ss_dssp             SHHHHHHHH---HHHHHCCCCCSSCCCTTCEEEEECCBTTTBCSSS---------CCSSHH-------HHBCTTHHHHHH
T ss_pred             hhhhHHHHH---HHHHhcCCCcCCCCcCCCcEEEEeccccEEcccc---------cCCCcc-------eEeCCCHHHHHH
Confidence            334444443   3334443 33345556788999999997776531         111121       134688999999


Q ss_pred             HHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecC
Q 044563          181 KLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLD  223 (290)
Q Consensus       181 ~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~  223 (290)
                      ++. .+++|++-|.-....-+.-++.|--.|...+...+.|..
T Consensus       175 ~l~-~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~  216 (320)
T 3shq_A          175 SAY-EDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDS  216 (320)
T ss_dssp             HHH-HHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECG
T ss_pred             HHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcC
Confidence            998 579999999988777777777776555543444455543

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=89.06  E-value=0.23  Score=43.49  Aligned_cols=66  Identities=12%  Similarity=0.069  Sum_probs=45.8

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      .+|..+|+|+||||-....-..++        |       .-..-|++.+|++++. .+++|++-|.-....-+.-++.|
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~~~~--------~-------~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~L   95 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQKHG--------W-------RTAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKL   95 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEETTTE--------E-------EEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHT
T ss_pred             CCCeEEEEeccccEEeeeccccCc--------e-------eEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHh
Confidence            446689999999776653211111        2       2356899999999998 78999999987665555555555


Q ss_pred             Hh
Q 044563          208 IS  209 (290)
Q Consensus       208 ~~  209 (290)
                      .-
T Consensus        96 Dp   97 (204)
T 3qle_A           96 DP   97 (204)
T ss_dssp             ST
T ss_pred             CC
Confidence            43

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=88.74  E-value=0.37  Score=50.71  Aligned_cols=88  Identities=13%  Similarity=-0.005  Sum_probs=57.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH-HhCCCCCC--CcceeecCc-c-----------------c
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL-ISAGYRGW--SSLIMRLDN-E-----------------M  226 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL-~~~Gy~~~--d~LiLR~~~-~-----------------~  226 (290)
                      .+|+-|++.+.++.+++.|++|+.|||...    .|.+.. ++.|...-  +.-.+-+.+ +                 -
T Consensus       486 ~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~----~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~  561 (885)
T 3b8c_A          486 FDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGF  561 (885)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCCEEEESSCH----HHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCE
T ss_pred             ecccchhHHHHHHHHHHcCCcEEEEcCCCh----HHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEE
Confidence            478899999999999999999999999874    333333 35576420  000110000 0                 0


Q ss_pred             CcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          227 QMDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       227 ~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      ..-..+-|...=+.++++| .+++.+||-.+|..
T Consensus       562 arv~P~~K~~iV~~lq~~g-~~Vam~GDGvNDap  594 (885)
T 3b8c_A          562 AGVFPEHKYEIVKKLQERK-HIVGMTGDGVNDAP  594 (885)
T ss_dssp             ECCCHHHHHHHHHHHHHTT-CCCCBCCCSSTTHH
T ss_pred             EEECHHHHHHHHHHHHHCC-CeEEEEcCCchhHH
Confidence            0012246777777888887 57889999999975

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=83.81  E-value=0.14  Score=46.64  Aligned_cols=15  Identities=7%  Similarity=0.100  Sum_probs=12.5

Q ss_pred             CcEEEEecccccccC
Q 044563          130 LDVVLMDIDDIFASS  144 (290)
Q Consensus       130 ~~AvVfDIDetLsn~  144 (290)
                      ..+|+||+||||.+.
T Consensus        21 ~kli~fDlDGTLld~   35 (332)
T 1y8a_A           21 GHMFFTDWEGPWILT   35 (332)
T ss_dssp             CCEEEECSBTTTBCC
T ss_pred             ceEEEEECcCCCcCc
Confidence            359999999987775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	290
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	99.96
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.76
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	99.11
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	99.0
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	98.57
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	98.35
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.34
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	98.29
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.11
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.02
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.0
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.91
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	97.9
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.88
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	97.84
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.82
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	97.75
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	97.74
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.71
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	97.61
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	97.55
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.42
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	97.39
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.36
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.27
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.26
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.25
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.21
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.21
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.14
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	97.13
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	96.98
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	96.96
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	96.83
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.79
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	96.76
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	96.68
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	96.67
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	96.53
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.52
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	96.26
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	96.22
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	96.12
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.95
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	95.88
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.72
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	95.58
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	95.49
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	95.29
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	95.0
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	94.83
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	94.73
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	94.51
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	93.5
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	87.47
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	83.92
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	83.1

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.9e-31  Score=234.23  Aligned_cols=145  Identities=15%  Similarity=0.159  Sum_probs=116.9

Q ss_pred             CCCCcEEEEeccc-ccccChhhhhhc--c---CC---CCccchHHHHH--hhcCcCcHHHHHHHHHHHhCCCeEEEecCC
Q 044563          127 YNGLDVVLMDIDD-IFASSSKYSNLL--I---DR---VNVRGYIECIE--EAKHLKHMFTLKLFMKLQVRGWPVILLSRK  195 (290)
Q Consensus       127 ~~g~~AvVfDIDe-tLsn~~y~~~~~--~---G~---~~~~~w~~Wv~--~~~apaip~~l~l~~~l~~~Gv~V~~iSgR  195 (290)
                      +.+|.|||||||| +|+|+||+....  +   |.   ++++.|+.|+.  ++.++|+||+++|+++++++|++|||||||
T Consensus        32 g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR  111 (209)
T d2b82a1          32 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGR  111 (209)
T ss_dssp             TCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECS
T ss_pred             CCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCC
Confidence            3445599999999 999999854321  1   11   57888988886  466889999999999999999999999999


Q ss_pred             CccchHHHHHHHHh-CCCCC--CCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCccccc-----CCCCcce
Q 044563          196 HEGQRNATTELLIS-AGYRG--WSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALI-----GQSLGKR  267 (290)
Q Consensus       196 ~e~~r~~T~~NL~~-~Gy~~--~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~-----G~~~g~r  267 (290)
                      ++.+++.|++||++ .||+.  ..+++|++...       +|..+|+.|+ + |+|++++||||+||.     |.. +.|
T Consensus       112 ~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~-------~K~~rr~~Ik-~-y~I~l~~GD~l~Df~aA~eagi~-~iR  181 (209)
T d2b82a1         112 SPTKTETVSKTLADNFHIPATNMNPVIFAGDKP-------GQNTKSQWLQ-D-KNIRIFYGDSDNDITAARDVGAR-GIR  181 (209)
T ss_dssp             CCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT-------TCCCSHHHHH-H-TTEEEEEESSHHHHHHHHHTTCE-EEE
T ss_pred             chhhHHHHHHHHHHHcCCCcccccceEeeCCCC-------CchHHHHHHH-H-cCeEEEecCCHHHHhHHHHcCCC-ceE
Confidence            99999999999976 89984  45788875442       6778888884 4 999999999999996     443 788


Q ss_pred             EEEccCCccccccc
Q 044563          268 VFKLPNPLYYSFDH  281 (290)
Q Consensus       268 ~fkLPNPmY~~we~  281 (290)
                      .+++||++|.+++.
T Consensus       182 i~r~~~s~y~p~p~  195 (209)
T d2b82a1         182 ILRASNSTYKPLPQ  195 (209)
T ss_dssp             CCCCTTCSSCSCCC
T ss_pred             eeccCCCCCCCchh
Confidence            88888888876554

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.76  E-value=4.1e-19  Score=143.68  Aligned_cols=132  Identities=10%  Similarity=0.099  Sum_probs=102.4

Q ss_pred             CCCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          128 NGLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       128 ~g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      .+|+||||||||||..+...        .   +..|.....+.++|+++++++.|+++|++|+++|||++..|..|.+||
T Consensus         5 ~kpk~vifDiDgTL~~~~~~--------~---~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l   73 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGR--------G---PYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY   73 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSC--------C---TTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH
T ss_pred             CCCcEEEEEcCCCcEeCCCC--------C---cCCccccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH
Confidence            45679999999988765321        1   223444567899999999999999999999999999999999999999


Q ss_pred             HhCC-------CCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEEc
Q 044563          208 ISAG-------YRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       208 ~~~G-------y~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                      ...+       ......+.++..++.++ ...+|....+++...+|.|+++|||..+|+... ..|-+.|..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V  144 (149)
T d1ltqa1          74 RMTRKWVEDIAGVPLVMQCQREQGDTRK-DDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV  144 (149)
T ss_dssp             HHHHHHHHHTTCCCCSEEEECCTTCCSC-HHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred             HHHhhhhhhcCCCcEEEeecccccccCC-chHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEe
Confidence            8743       22345677777776555 445888888888888999999999999999753 346666654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=99.11  E-value=6.5e-11  Score=95.64  Aligned_cols=75  Identities=9%  Similarity=0.204  Sum_probs=62.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC------------cc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH------------EG  198 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~------------e~  198 (290)
                      ..++|||||||.....      +.|           ..+.|+++++++++.|.+.|++|++.|+|.            +.
T Consensus         2 K~i~~DiDGTI~~~~~------~~y-----------~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~   64 (124)
T d1xpja_           2 KKLIVDLDGTLTQANT------SDY-----------RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIH   64 (124)
T ss_dssp             CEEEECSTTTTBCCCC------SCG-----------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHH
T ss_pred             CEEEEeCCCCeECCCC------CCc-----------CccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHH
Confidence            4799999999987531      111           245789999999999999999999999994            46


Q ss_pred             chHHHHHHHHhCCCCCCCcceeecC
Q 044563          199 QRNATTELLISAGYRGWSSLIMRLD  223 (290)
Q Consensus       199 ~r~~T~~NL~~~Gy~~~d~LiLR~~  223 (290)
                      .++.|++||+++|.+ |+.|+|..+
T Consensus        65 ~~~~T~~wL~~~gI~-Yd~Li~gKP   88 (124)
T d1xpja_          65 TLPIITEWLDKHQVP-YDEILVGKP   88 (124)
T ss_dssp             THHHHHHHHHHTTCC-CSEEEECCC
T ss_pred             HHHHHHHHHHHcCCC-ceEEEECCC
Confidence            789999999999996 999999644

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.00  E-value=1.8e-10  Score=92.52  Aligned_cols=67  Identities=15%  Similarity=0.135  Sum_probs=56.7

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .|+|||||||....++                   ..+.|+|+++++++.|.+.|++|++.|+|.+..++.|++||+++|
T Consensus         2 ti~vDiDGTl~~~~~~-------------------~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~   62 (122)
T d2obba1           2 TIAVDFDGTIVEHRYP-------------------RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARG   62 (122)
T ss_dssp             EEEECCBTTTBCSCTT-------------------SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTT
T ss_pred             EEEEEcCCCcCCCCCC-------------------ccccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcC
Confidence            4899999998765321                   024689999999999999999999999999999999999999999


Q ss_pred             CCCCCcc
Q 044563          212 YRGWSSL  218 (290)
Q Consensus       212 y~~~d~L  218 (290)
                      ++ ++.+
T Consensus        63 i~-yd~i   68 (122)
T d2obba1          63 LE-FYAA   68 (122)
T ss_dssp             CC-CSEE
T ss_pred             CC-ceeh
Confidence            96 4443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.57  E-value=3.9e-08  Score=81.21  Aligned_cols=103  Identities=10%  Similarity=0.026  Sum_probs=66.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCccee-ecCcccCc-chHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIM-RLDNEMQM-DSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiL-R~~~~~~~-~~~~yKs~~R~~i~~~G  245 (290)
                      ...+.|++.++++.|+++|++++++||+++.    +.+-|++.|+..+=..++ ..+...++ +.-.|... .+++.-..
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~----~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~-~~~~~~~p  154 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN----AFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYL-LDKYQLNS  154 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHH-HHHHTCCG
T ss_pred             cCcccchHHhhhhcccccccchhhhcccchh----hhhhhhhcccccccccccccccccccchhHHHHHHH-HHHhCCCC
Confidence            4566899999999999999999999998653    345588889876533333 22222222 22223322 22222122


Q ss_pred             CeEEEEeCCCcccccCCC-CcceEEEccCCcc
Q 044563          246 FHITGLISNQMDALIGQS-LGKRVFKLPNPLY  276 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~~-~g~r~fkLPNPmY  276 (290)
                      -+ +..|||..+|+.+.. .|-+++-+.++.|
T Consensus       155 ~~-~l~VgD~~~Di~~A~~~G~~~i~v~~~~~  185 (204)
T d2go7a1         155 DN-TYYIGDRTLDVEFAQNSGIQSINFLESTY  185 (204)
T ss_dssp             GG-EEEEESSHHHHHHHHHHTCEEEESSCCSC
T ss_pred             ce-EEEEeCCHHHHHHHHHcCCeEEEEcCCCC
Confidence            24 458999999998753 5778887877654

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=3.4e-07  Score=74.50  Aligned_cols=137  Identities=12%  Similarity=-0.001  Sum_probs=81.9

Q ss_pred             CCcEEEEecccccccChhhhhhccC---CCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHH
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLID---RVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTE  205 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G---~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~  205 (290)
                      -|++||||+||||-...+...-..+   ..+....+.+  ...-...|++.++++.|+++|+++.++|+.++  ...+..
T Consensus         4 ~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~--~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~--~~~~~~   79 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRR--GQNIQLYPEVPEVLGRLQSLGVPVAAASRTSE--IQGANQ   79 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETT--CCEECCCTTHHHHHHHHHHTTCCEEEEECCSC--HHHHHH
T ss_pred             CCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhh--ccccccchHHHHHHHHHHHCCCcEEEEecccc--chhhcc
Confidence            3679999999998765432210000   0111111111  12346789999999999999999999998654  244555


Q ss_pred             HHHhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          206 LLISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       206 NL~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .|+..|+..+...+.....   +..-.|+... +++- -...=+..|||...|+... ..|-+++-.|+.
T Consensus        80 ~l~~~~~~~~~~~~~~~~k---p~~~~~~~~~-~~~~-~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G  144 (164)
T d1u7pa_          80 LLELFDLGKYFIQREIYPG---SKVTHFERLH-HKTG-VPFSQMVFFDDENRNIIDVGRLGVTCIHIRDG  144 (164)
T ss_dssp             HHHHTTCGGGCSEEEESSS---CHHHHHHHHH-HHHC-CCGGGEEEEESCHHHHHHHHTTTCEEEECSSC
T ss_pred             chhcccccccceeeecccC---CChHHHHHHH-HHhC-CChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            6777777544333332211   1122244322 2221 2233445699999999864 468889999886

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.7e-06  Score=73.26  Aligned_cols=105  Identities=13%  Similarity=0.037  Sum_probs=64.8

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC----cceeecCc-------ccCcchHHhhHH
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS----SLIMRLDN-------EMQMDSREYLSR  236 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d----~LiLR~~~-------~~~~~~~~yKs~  236 (290)
                      .....|++.+++++++++|++++++||=   .+.....-++..|++.++    ++-....+       .........|..
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~---~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~  156 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGG---FRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGK  156 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHH
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCC---chHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHH
Confidence            4456799999999999999999999974   456667778888987442    11111111       011111234555


Q ss_pred             HHHHHH-hcCCeEEEEeCCCcccccCCCCcceEEE-ccCCc
Q 044563          237 RRTILQ-KEGFHITGLISNQMDALIGQSLGKRVFK-LPNPL  275 (290)
Q Consensus       237 ~R~~i~-~~GYrIv~~iGDq~sDl~G~~~g~r~fk-LPNPm  275 (290)
                      ..+.+. ..++.=+..+||..+|+.-.......|- =|||.
T Consensus       157 ~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~  197 (217)
T d1nnla_         157 VIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVI  197 (217)
T ss_dssp             HHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCC
T ss_pred             HHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHH
Confidence            544443 2355557889999999975433222333 36654

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=1.2e-06  Score=72.41  Aligned_cols=104  Identities=13%  Similarity=0.077  Sum_probs=68.4

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcchH-HhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMDSR-EYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~~~-~yKs~~R~~i~~~G  245 (290)
                      ..+.+|++.++++.|+++|+++.++||.+   +..+..-|+..|+.+ ++.++-..+....+... .|.. .-+++--..
T Consensus        86 ~~~~~pg~~~~l~~L~~~g~~~~i~T~~~---~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~-~~~~l~~~~  161 (218)
T d1te2a_          86 TRPLLPGVREAVALCKEQGLLVGLASASP---LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLD-CAAKLGVDP  161 (218)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHH-HHHHHTSCG
T ss_pred             cccccchHHHHHHHhhhcccccccccccc---ccccccccccccccccccccccccccccchhhHHHHHH-HHHHcCCCc
Confidence            45678999999999999999999999974   556778888889854 35544443333333322 2332 222222122


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccCCcc
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPNPLY  276 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPNPmY  276 (290)
                      -++ ..|||..+|+.+. ..|-.++-+|++.-
T Consensus       162 ~~~-l~igD~~~di~aA~~~G~~~i~v~~~~~  192 (218)
T d1te2a_         162 LTC-VALEDSVNGMIASKAARMRSIVVPAPEA  192 (218)
T ss_dssp             GGE-EEEESSHHHHHHHHHTTCEEEECCCTTT
T ss_pred             hhc-EEEeeCHHHHHHHHHcCCEEEEECCCCC
Confidence            344 5699999998764 45777777776543

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=7.9e-06  Score=70.01  Aligned_cols=63  Identities=17%  Similarity=0.238  Sum_probs=52.6

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ++|+||+||||-+..                        .++|++.++++.++++|++|+|+||.+...++.-.+-|++.
T Consensus         4 k~VifDlDGTL~~~~------------------------~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~   59 (250)
T d2c4na1           4 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATA   59 (250)
T ss_dssp             CEEEEECBTTTEETT------------------------EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHT
T ss_pred             CEEEEECCCeeEECC------------------------CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhc
Confidence            599999999886531                        34678899999999999999999998888888888889999


Q ss_pred             CCCCCCc
Q 044563          211 GYRGWSS  217 (290)
Q Consensus       211 Gy~~~d~  217 (290)
                      |++-.+.
T Consensus        60 G~~~~~~   66 (250)
T d2c4na1          60 GVDVPDS   66 (250)
T ss_dssp             TCCCCGG
T ss_pred             cccccce
Confidence            9974433

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.02  E-value=5.3e-06  Score=68.03  Aligned_cols=104  Identities=9%  Similarity=0.002  Sum_probs=65.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GY  246 (290)
                      ...+.|++.++++.|++.|+++.++||.+   +.....-|++.|+..+ +..+-..+....++........++++.-..=
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~  169 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKP---TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK  169 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred             ccchHHHHHHHHHHHhccCCccccccccc---HHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhh
Confidence            45578999999999999999999999976   3456667889997643 4444333332233222222222333322223


Q ss_pred             eEEEEeCCCcccccCCC-CcceEEEccCCc
Q 044563          247 HITGLISNQMDALIGQS-LGKRVFKLPNPL  275 (290)
Q Consensus       247 rIv~~iGDq~sDl~G~~-~g~r~fkLPNPm  275 (290)
                      + +..|||...|+.+.. .|-+++-+.++.
T Consensus       170 ~-~~~igD~~~Di~~A~~aG~~~i~v~~g~  198 (224)
T d2hsza1         170 Q-ILFVGDSQNDIFAAHSAGCAVVGLTYGY  198 (224)
T ss_dssp             G-EEEEESSHHHHHHHHHHTCEEEEESSSC
T ss_pred             c-cchhcCcHHHHHHHHHcCCeEEEEeCCC
Confidence            3 456999999998753 355666666543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.00  E-value=6.8e-06  Score=67.01  Aligned_cols=99  Identities=10%  Similarity=0.104  Sum_probs=63.7

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCc-chHHhhHHHHHHHHhc
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQM-DSREYLSRRRTILQKE  244 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~-~~~~yKs~~R~~i~~~  244 (290)
                      ...++.||+.++++.++++|++++++||+++    .+.+-|++.|...+ +.++-..+...++ +.-.|+...+ ++   
T Consensus        76 ~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~----~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~-~~---  147 (187)
T d2fi1a1          76 EHPILFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLRE-KY---  147 (187)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHH-HT---
T ss_pred             hcCcccchhHHHHHHHHhhhccccccccCcc----chhhhhhhhccccccccccccccccccCCCHHHHHHHHH-Hc---
Confidence            3567789999999999999999999999764    23455888887543 3443332222222 2233544333 22   


Q ss_pred             CCeEEEEeCCCcccccCC-CCcceEEEccC
Q 044563          245 GFHITGLISNQMDALIGQ-SLGKRVFKLPN  273 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~-~~g~r~fkLPN  273 (290)
                      |-.=...|||...|+.+. ..|-+++.+..
T Consensus       148 ~~~~~l~vgDs~~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         148 QISSGLVIGDRPIDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             TCSSEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred             CCCCeEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            222256899999999874 45777766543

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=2.9e-06  Score=69.73  Aligned_cols=134  Identities=10%  Similarity=0.119  Sum_probs=77.5

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCcc-----------
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEG-----------  198 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~-----------  198 (290)
                      +.+|+||.||||-....+      .|....++      ....+|++++++++|+++|++++++||.+.-           
T Consensus         2 ~K~i~~D~DGtL~~~~~~------~~~~~~~~------~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~   69 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPS------DFQVDRFD------KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFD   69 (161)
T ss_dssp             CEEEEECCBTTTBCCC--------CCCCCSGG------GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHH
T ss_pred             CcEEEEeCCCCeEeeCCC------CCccCCHH------HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhh
Confidence            469999999988765432      12222232      2367899999999999999999999997531           


Q ss_pred             -chHHHHHHHHhCCCCCCCcceee---cCc--ccCc--chHHhhHHHHHHHHhcCCeEEEEeCCCcccccCCC-CcceEE
Q 044563          199 -QRNATTELLISAGYRGWSSLIMR---LDN--EMQM--DSREYLSRRRTILQKEGFHITGLISNQMDALIGQS-LGKRVF  269 (290)
Q Consensus       199 -~r~~T~~NL~~~Gy~~~d~LiLR---~~~--~~~~--~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~~-~g~r~f  269 (290)
                       ......+.|...|.. .+..+.-   +.+  ..+|  ...-.+-..+..+. . .+ ..+|||.+.|+.++. .|- .+
T Consensus        70 ~~~~~l~~~l~~~~~~-~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id-~-~~-~~~IGD~~~Di~aA~~aG~-~~  144 (161)
T d2fpwa1          70 GPHNLMMQIFTSQGVQ-FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMD-R-AN-SYVIGDRATDIQLAENMGI-NG  144 (161)
T ss_dssp             HHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCSSSTTSSGGGGGGC----CC-G-GG-CEEEESSHHHHHHHHHHTS-EE
T ss_pred             hhhhhhhhhccccccc-cceeeeccccccccccccccccHHHHHHHHhcCCC-h-hc-EEEECCCHHHHHHHHHcCC-eE
Confidence             112345667778864 2222221   100  1111  11111111222221 1 22 468999999998764 455 46


Q ss_pred             EccCCcccccc
Q 044563          270 KLPNPLYYSFD  280 (290)
Q Consensus       270 kLPNPmY~~we  280 (290)
                      .|.||-...|.
T Consensus       145 i~i~~~~~~~~  155 (161)
T d2fpwa1         145 LRYDRETLNWP  155 (161)
T ss_dssp             EECBTTTBCHH
T ss_pred             EEECCCCCCHH
Confidence            67788777775

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=97.90  E-value=6.9e-06  Score=70.32  Aligned_cols=60  Identities=12%  Similarity=0.185  Sum_probs=52.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS  209 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~  209 (290)
                      =++|+||+||||-+.                        ..++|++.++++.|+++|.+++|+||+....+....+.|+.
T Consensus         7 ik~vlFDlDGTL~~~------------------------~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~   62 (261)
T d1vjra_           7 IELFILDMDGTFYLD------------------------DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN   62 (261)
T ss_dssp             CCEEEECCBTTTEET------------------------TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCeeEEC------------------------CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            369999999988552                        14578899999999999999999999988888889999999


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|++
T Consensus        63 ~g~~   66 (261)
T d1vjra_          63 MGVD   66 (261)
T ss_dssp             TTCC
T ss_pred             hccc
Confidence            9986

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.88  E-value=8.6e-06  Score=69.54  Aligned_cols=53  Identities=15%  Similarity=0.270  Sum_probs=39.4

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      +.+||.||.||||-....|.      .++..|         ..+|++.+++++|+++|++++++||++
T Consensus        22 ~~~Aif~DrDGtl~~~~~y~------~~~~~~---------~l~pgv~e~L~~L~~~G~~l~IvTNQ~   74 (209)
T d2o2xa1          22 HLPALFLDRDGTINVDTDYP------SDPAEI---------VLRPQMLPAIATANRAGIPVVVVTNQS   74 (209)
T ss_dssp             SCCCEEECSBTTTBCCCSCT------TCGGGC---------CBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             CCCEEEEeCCCCeECCCCCC------CCHHHe---------EecccHHHHHHHHHhhCCeEEEecccc
Confidence            34799999999774332221      233222         468999999999999999999999965

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=97.84  E-value=1.1e-05  Score=66.53  Aligned_cols=100  Identities=10%  Similarity=0.064  Sum_probs=62.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHH-hhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSRE-YLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~-yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.|++.|++|.++|++..     ...-|+..|..++ +.++-..+...+++... |. ...+++.-..
T Consensus        89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~-----~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~-~~l~~~~i~~  162 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNKIKIALASASKN-----GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFI-AAAHAVGVAP  162 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHH-HHHHHTTCCG
T ss_pred             cccccCCceeccccccccccceEEEeecch-----hhHHHHhhccccccccccccccccccccChHHHH-HHHHHcCCCC
Confidence            456899999999999999999999999753     2455677777654 33332222222332222 32 2222222233


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -+++ .|||...|+.+. ..|-+++-+++|
T Consensus       163 ~~~l-~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         163 SESI-GLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             GGEE-EEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             ceEE-EEecCHHHHHHHHHcCCEEEEECCh
Confidence            4555 799999999874 246666666654

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.82  E-value=2e-05  Score=65.18  Aligned_cols=92  Identities=8%  Similarity=-0.094  Sum_probs=57.5

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC---cceeec-----------CcccCcchHH
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS---SLIMRL-----------DNEMQMDSRE  232 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d---~LiLR~-----------~~~~~~~~~~  232 (290)
                      ...+..|++.++++.|++.|++++++|+-   .+.....-|+..|...+-   .+....           .....+....
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~---~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~  148 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGG---MDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC  148 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEE---EHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcc---hhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHH
Confidence            45778999999999999999999999984   567777778888864220   011100           0000111112


Q ss_pred             hhHHHHHHHHhcCCeEEEEeCCCcccccCC
Q 044563          233 YLSRRRTILQKEGFHITGLISNQMDALIGQ  262 (290)
Q Consensus       233 yKs~~R~~i~~~GYrIv~~iGDq~sDl~G~  262 (290)
                      -|...-+++. ....-+..|||..+|+...
T Consensus       149 ~~~~~~~~~~-~~~~~~i~iGDs~~Dl~~a  177 (226)
T d2feaa1         149 CKPSVIHELS-EPNQYIIMIGDSVTDVEAA  177 (226)
T ss_dssp             CHHHHHHHHC-CTTCEEEEEECCGGGHHHH
T ss_pred             HHHHHHHHhc-CCCceEEEEeCchhhHHHH
Confidence            2333333343 3345567999999999864

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=97.75  E-value=4.4e-05  Score=64.43  Aligned_cols=97  Identities=9%  Similarity=-0.032  Sum_probs=58.7

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceeecCcccCcch-HHhhHHHHHHHHhcCC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMRLDNEMQMDS-REYLSRRRTILQKEGF  246 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~GY  246 (290)
                      ...++|++.++++.|+++|+++.++||.++..-....+.+.-.+|. .+.++-..+...+|+. -.|.    +.+++.|-
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~~~KP~p~~~~----~~~~~l~~  171 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVPAGRPYPWMCY----KNAMELGV  171 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSSCCTTSSHHHH----HHHHHHTC
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-cccccccccccccccChHHHH----HHHHHhCC
Confidence            3468999999999999999999999998765544444444444442 2344433222222321 1232    23333332


Q ss_pred             ---eEEEEeCCCcccccCC-CCcceEE
Q 044563          247 ---HITGLISNQMDALIGQ-SLGKRVF  269 (290)
Q Consensus       247 ---rIv~~iGDq~sDl~G~-~~g~r~f  269 (290)
                         .=+.+|||..+|+.++ ..|-+++
T Consensus       172 ~p~~~~v~VgDs~~Di~aA~~aG~~ti  198 (257)
T d1swva_         172 YPMNHMIKVGDTVSDMKEGRNAGMWTV  198 (257)
T ss_dssp             CSGGGEEEEESSHHHHHHHHHTTSEEE
T ss_pred             CCcceEEEEeCChhhHHHHHHCCCEEE
Confidence               2256899999999764 2354444

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.74  E-value=1.8e-05  Score=67.60  Aligned_cols=56  Identities=13%  Similarity=0.188  Sum_probs=45.7

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      ++|+||+||||-+..                        .++|++.+.++.|++.|++++|+|||+...+..-.+.|...
T Consensus         3 k~v~fDlDGTL~~~~------------------------~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~   58 (253)
T d1yv9a1           3 QGYLIDLDGTIYLGK------------------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANE   58 (253)
T ss_dssp             CEEEECCBTTTEETT------------------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHH
T ss_pred             CEEEEcCCCccEeCC------------------------CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHh
Confidence            599999999885531                        34788999999999999999999999877776666677644

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=2.6e-05  Score=64.11  Aligned_cols=52  Identities=10%  Similarity=0.231  Sum_probs=39.1

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      +||+||.||||-....|      ..++..|         ..+|+++++++.|+++|++++++||.+.
T Consensus         3 ~Av~~DrDGtl~~~~~y------~~~~~~~---------~~~~gv~e~l~~L~~~g~~~~ivTNq~~   54 (182)
T d2gmwa1           3 PAIFLDRDGTINVDHGY------VHEIDNF---------EFIDGVIDAMRELKKMGFALVVVTNQSG   54 (182)
T ss_dssp             CEEEECSBTTTBCCCSS------CCSGGGC---------CBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred             CEEEEeCCCCccCCCCC------CCCHHHe---------eECCCHHHHHHHHhhcCchhhhhhccch
Confidence            69999999977432111      1223223         4689999999999999999999999874

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.8e-05  Score=62.75  Aligned_cols=107  Identities=12%  Similarity=0.082  Sum_probs=64.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchH-HHHHHHHhCCCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRN-ATTELLISAGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~-~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ...+.|++++++..|+++|+++.++||-...... .........|+.+ ++..+-..+...+|+ ...|+...+ .+--.
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~-~~~~~  175 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLD-TLKAS  175 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHH-HHTCC
T ss_pred             cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhh-hcccC
Confidence            4578999999999999999999999997644322 2222233333322 345544332222332 223443322 22212


Q ss_pred             CCeEEEEeCCCcccccCC-CCcceEEEccCCcc
Q 044563          245 GFHITGLISNQMDALIGQ-SLGKRVFKLPNPLY  276 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNPmY  276 (290)
                      .=+++ .|||...|+.+. ..|-+++-+.++..
T Consensus       176 p~e~l-~VgD~~~Di~~A~~~G~~ti~v~~~~~  207 (225)
T d1zd3a1         176 PSEVV-FLDDIGANLKPARDLGMVTILVQDTDT  207 (225)
T ss_dssp             GGGEE-EEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred             cccee-EEecCHHHHHHHHHcCCEEEEECCcch
Confidence            24455 689999999874 46888888876543

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=97.55  E-value=3.2e-05  Score=63.38  Aligned_cols=96  Identities=13%  Similarity=-0.006  Sum_probs=60.9

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++.++++.+++ ++++.++||..   +.....-|+..|...+ +..+-..+...+++ ...|+.    .+++-|
T Consensus        80 ~~~~~~g~~~~L~~l~~-~~~~~ivT~~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~----~~~~~~  151 (207)
T d2hdoa1          80 QIELYPGITSLFEQLPS-ELRLGIVTSQR---RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLT----ALEKVN  151 (207)
T ss_dssp             GCEECTTHHHHHHHSCT-TSEEEEECSSC---HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHH----HHHHTT
T ss_pred             ccccccchhhhhhhhcc-ccccccccccc---ccccccccccccccccccccccccccccchhhhhhhcc----ccccee
Confidence            55788999999999975 79999999964   6677788888887543 33222222222222 222332    233333


Q ss_pred             ---CeEEEEeCCCcccccCC-CCcceEEEcc
Q 044563          246 ---FHITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 ---YrIv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                         -+++ .|||...|+.+. ..|-+++..+
T Consensus       152 ~~~~~~l-~VgDs~~Di~~a~~aG~~~i~v~  181 (207)
T d2hdoa1         152 VAPQNAL-FIGDSVSDEQTAQAANVDFGLAV  181 (207)
T ss_dssp             CCGGGEE-EEESSHHHHHHHHHHTCEEEEEG
T ss_pred             eecccee-EecCCHHHHHHHHHcCCeEEEEe
Confidence               3455 589999999864 3466666554

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.42  E-value=0.00012  Score=59.58  Aligned_cols=46  Identities=17%  Similarity=0.330  Sum_probs=36.1

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ  199 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~  199 (290)
                      .+|+||+||||.+...                       ..-+.+.+.+++|+++|+.|+++|||+-..
T Consensus         3 K~i~~D~DGTL~~~~~-----------------------~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~   48 (230)
T d1wr8a_           3 KAISIDIDGTITYPNR-----------------------MIHEKALEAIRRAESLGIPIMLVTGNTVQF   48 (230)
T ss_dssp             CEEEEESTTTTBCTTS-----------------------CBCHHHHHHHHHHHHTTCCEEEECSSCHHH
T ss_pred             eEEEEecCCCCcCCCC-----------------------ccCHHHHHHHHHHHhCCCeEEEEeCCcHHH
Confidence            5899999998876411                       112567888999999999999999998543

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=97.39  E-value=0.00013  Score=62.27  Aligned_cols=59  Identities=19%  Similarity=0.238  Sum_probs=44.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHh-
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLIS-  209 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~-  209 (290)
                      ++|+||+||||-+.                        ..++|++.++++.|+++|++++|+||+....++.-.+-|.. 
T Consensus         3 k~vlFDlDGTL~~~------------------------~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~   58 (253)
T d1wvia_           3 KGYLIDLDGTIYKG------------------------KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATS   58 (253)
T ss_dssp             CEEEEECBTTTEET------------------------TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHH
T ss_pred             CEEEEcCcCceEEC------------------------CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhh
Confidence            69999999988542                        13589999999999999999999999766555544455543 


Q ss_pred             CCCC
Q 044563          210 AGYR  213 (290)
Q Consensus       210 ~Gy~  213 (290)
                      .|+.
T Consensus        59 ~~~~   62 (253)
T d1wvia_          59 FNIK   62 (253)
T ss_dssp             HSCC
T ss_pred             cCcc
Confidence            3443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.36  E-value=0.0002  Score=60.74  Aligned_cols=58  Identities=12%  Similarity=0.203  Sum_probs=43.7

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.|+|||||||.+...                       ..-+.+++.+++|+++|+++++.|||+-   ..+.+-++..
T Consensus         2 Kli~~DlDGTLl~~~~-----------------------~i~~~~~~~l~~l~~~Gi~~~i~TGR~~---~~~~~~~~~l   55 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKH-----------------------QVSLENENALRQAQRDGIEVVVSTGRAH---FDVMSIFEPL   55 (285)
T ss_dssp             CEEEEECCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHGGG
T ss_pred             eEEEEECCccccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCCH---HHHHHHHHHh
Confidence            3799999998876311                       1125788999999999999999999973   3456666677


Q ss_pred             CCCC
Q 044563          211 GYRG  214 (290)
Q Consensus       211 Gy~~  214 (290)
                      |++.
T Consensus        56 ~~~~   59 (285)
T d1nrwa_          56 GIKT   59 (285)
T ss_dssp             TCCC
T ss_pred             CCCc
Confidence            7753

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00025  Score=57.56  Aligned_cols=56  Identities=23%  Similarity=0.269  Sum_probs=38.6

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      -|++|+||||.+...        +               .-+.+.+.+++|+++|+.+++.|||+-.   ...+-++..|
T Consensus         6 li~~DlDGTLl~~~~--------~---------------i~~~~~~al~~l~~~Gi~~~i~TGR~~~---~~~~~~~~~~   59 (232)
T d1xvia_           6 LVFSDLDGTLLDSHS--------Y---------------DWQPAAPWLTRLREANVPVILCSSKTSA---EMLYLQKTLG   59 (232)
T ss_dssp             EEEEECTTTTSCSSC--------C---------------SCCTTHHHHHHHHHTTCCEEEECSSCHH---HHHHHHHHTT
T ss_pred             EEEEECCCCccCCcC--------c---------------CCHHHHHHHHHHHHCCCEEEEEeCCChh---hchhHHHHhc
Confidence            577799998776421        1               1124667889999999999999999843   3344555556


Q ss_pred             CC
Q 044563          212 YR  213 (290)
Q Consensus       212 y~  213 (290)
                      +.
T Consensus        60 ~~   61 (232)
T d1xvia_          60 LQ   61 (232)
T ss_dssp             CT
T ss_pred             cC
Confidence            53

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.26  E-value=0.00019  Score=59.02  Aligned_cols=55  Identities=15%  Similarity=0.177  Sum_probs=40.3

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.|++||||||.+.          +.+               +.+.+.++.|+++|++|++.|||+-   ..+..-++..
T Consensus         3 Kli~~DlDGTLl~~----------~~~---------------~~~~~ai~~l~~~G~~~~~aTGR~~---~~~~~~~~~~   54 (243)
T d1wzca1           3 RLIFLDIDKTLIPG----------YEP---------------DPAKPIIEELKDMGFEIIFNSSKTR---AEQEYYRKEL   54 (243)
T ss_dssp             EEEEECCBTTTBSS----------SCS---------------GGGHHHHHHHHHTTEEEEEECSSCH---HHHHHHHHHH
T ss_pred             EEEEEeCCCCCCCC----------CCC---------------HHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHh
Confidence            47999999988653          111               1245678899999999999999974   4555566666


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        55 ~~~   57 (243)
T d1wzca1          55 EVE   57 (243)
T ss_dssp             TCC
T ss_pred             ccc
Confidence            765

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00018  Score=59.18  Aligned_cols=86  Identities=5%  Similarity=-0.114  Sum_probs=57.1

Q ss_pred             hcCcCcHHHHHHHHHHHhCCC-eEEEecCCCccc---hHHHHHHHHhCC-CCCCCcceeecCcccCcchHHhhHHHHHHH
Q 044563          167 AKHLKHMFTLKLFMKLQVRGW-PVILLSRKHEGQ---RNATTELLISAG-YRGWSSLIMRLDNEMQMDSREYLSRRRTIL  241 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv-~V~~iSgR~e~~---r~~T~~NL~~~G-y~~~d~LiLR~~~~~~~~~~~yKs~~R~~i  241 (290)
                      ...||+|+++++++.|.+.|. .|+++|.|+...   ...|.+||+++. ....+.+++-.  +        |.    .+
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~--~--------K~----~~  136 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTR--D--------KT----VV  136 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECS--C--------ST----TS
T ss_pred             hhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEcc--c--------cc----ee
Confidence            567999999999999999765 789999998643   467889999983 22345555521  1        21    01


Q ss_pred             HhcCCeEEEEeCCCcccccCC-CCcceEEEc
Q 044563          242 QKEGFHITGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       242 ~~~GYrIv~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                         +..  ..|.|...-+... ..|.+.+..
T Consensus       137 ---~~d--~lIDD~p~n~~~~~~~g~~~il~  162 (195)
T d1q92a_         137 ---SAD--LLIDDRPDITGAEPTPSWEHVLF  162 (195)
T ss_dssp             ---CCS--EEEESCSCCCCSCSSCSSEEEEE
T ss_pred             ---cCe--EEecCcHHHHHHHhcCCCeEEEE
Confidence               112  4789988766543 245555533

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.0004  Score=58.48  Aligned_cols=57  Identities=12%  Similarity=0.142  Sum_probs=41.1

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      +.|+||+||||.+...                       ..-|.+.+.++.|+++|++|+++|||+-..   ..+-++..
T Consensus         5 Kli~~DlDGTL~~~~~-----------------------~i~~~~~~al~~L~~~gi~v~i~TGR~~~~---~~~~~~~l   58 (271)
T d1rkqa_           5 KLIAIDMDGTLLLPDH-----------------------TISPAVKNAIAAARARGVNVVLTTGRPYAG---VHNYLKEL   58 (271)
T ss_dssp             CEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGG---THHHHHHT
T ss_pred             eEEEEeCCccccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHh
Confidence            4799999998865310                       112668899999999999999999998432   22445556


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        59 ~l~   61 (271)
T d1rkqa_          59 HME   61 (271)
T ss_dssp             TCC
T ss_pred             cCc
Confidence            654

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00018  Score=58.70  Aligned_cols=45  Identities=13%  Similarity=0.135  Sum_probs=34.4

Q ss_pred             CCcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          129 GLDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       129 g~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ||.-++|||||||.+...                       ..-|.+++.+++|+++|. ++++|||+-
T Consensus         2 ~~kl~~fDlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~g~-~~i~Tgr~~   46 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQ-----------------------KITKEMDDFLQKLRQKIK-IGVVGGSDF   46 (243)
T ss_dssp             CSEEEEEESBTTTBCTTS-----------------------CCCHHHHHHHHHHTTTSE-EEEECSSCH
T ss_pred             CCEEEEEcCcCCeeCCCC-----------------------cCCHHHHHHHHHHHcCCC-EEEEcCCCh
Confidence            567899999998876411                       123568889999998885 889999963

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.14  E-value=0.00027  Score=59.90  Aligned_cols=45  Identities=13%  Similarity=0.251  Sum_probs=34.5

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ++|+||+||||.+...       .               ..-+.+++.+++|+++|++|++.|||+-
T Consensus         2 k~if~DlDGTL~~~~~-------~---------------~i~~~~~~al~~l~~~gi~v~~~TGR~~   46 (260)
T d2rbka1           2 KALFFDIDGTLVSFET-------H---------------RIPSSTIEALEAAHAKGLKIFIATGRPK   46 (260)
T ss_dssp             CEEEECSBTTTBCTTT-------S---------------SCCHHHHHHHHHHHHTTCEEEEECSSCG
T ss_pred             eEEEEECCCCCcCCCC-------C---------------CCCHHHHHHHHHHHHCCCEEEEECCCCH
Confidence            4899999998865210       0               1124578899999999999999999984

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=97.13  E-value=0.00025  Score=57.69  Aligned_cols=100  Identities=14%  Similarity=0.129  Sum_probs=61.2

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCC-CCcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRG-WSSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~-~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ....+.|++.++++.++++|+++.++|+-.   ......-|...|... ++..+--.+....|+ .-.|+...+ ++--+
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~---~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~-~~g~~  165 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGS---PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQ-ALGLD  165 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHH-HHTSC
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchH---HHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHH-HhCCC
Confidence            356678999999999999999999999965   344555566666543 344443322222333 334443332 22212


Q ss_pred             CCeEEEEeCCCcccccCCC-CcceEEEc
Q 044563          245 GFHITGLISNQMDALIGQS-LGKRVFKL  271 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~~-~g~r~fkL  271 (290)
                      --+ +..|||..+|+.|.. .|-+++-+
T Consensus       166 p~e-~l~VgD~~~Di~~A~~aG~~~v~v  192 (220)
T d1zrna_         166 RSA-ILFVASNAWDATGARYFGFPTCWI  192 (220)
T ss_dssp             GGG-EEEEESCHHHHHHHHHHTCCEEEE
T ss_pred             Cce-EEEEecChHhHHHHHHcCCEEEEE
Confidence            233 568899999998752 45555544

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.00028  Score=59.52  Aligned_cols=57  Identities=16%  Similarity=0.243  Sum_probs=41.1

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAG  211 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~G  211 (290)
                      .|+||+||||.+...                      ...-|.+++.++.|+++|+.++++|||+-   ..+.+-+++.|
T Consensus         4 li~~DlDGTLl~~~~----------------------~~~~~~~~~~l~~l~~~gi~~~i~TGR~~---~~~~~~~~~l~   58 (269)
T d1rlma_           4 VIVTDMDGTFLNDAK----------------------TYNQPRFMAQYQELKKRGIKFVVASGNQY---YQLISFFPELK   58 (269)
T ss_dssp             EEEECCCCCCSCTTS----------------------CCCHHHHHHHHHHHHHHTCEEEEECSSCH---HHHGGGCTTTT
T ss_pred             EEEEeCCccCcCCCC----------------------cCChHHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHhC
Confidence            789999998876310                      01225688999999999999999999974   33444445566


Q ss_pred             CC
Q 044563          212 YR  213 (290)
Q Consensus       212 y~  213 (290)
                      +.
T Consensus        59 ~~   60 (269)
T d1rlma_          59 DE   60 (269)
T ss_dssp             TT
T ss_pred             cc
Confidence            54

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=96.96  E-value=0.00054  Score=57.52  Aligned_cols=45  Identities=11%  Similarity=0.183  Sum_probs=34.9

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      ..|+||+||||.+...                      ...-|.+++.+++|+++|++|+++|||+-
T Consensus        11 kli~~DlDGTLl~~~~----------------------~~i~~~~~~al~~l~~~Gi~v~i~TGR~~   55 (283)
T d2b30a1          11 KLLLIDFDGTLFVDKD----------------------IKVPSENIDAIKEAIEKGYMVSICTGRSK   55 (283)
T ss_dssp             CEEEEETBTTTBCCTT----------------------TCSCHHHHHHHHHHHHHTCEEEEECSSCH
T ss_pred             cEEEEECCCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence            4899999998864311                      01235688899999999999999999984

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.83  E-value=0.00054  Score=56.64  Aligned_cols=44  Identities=18%  Similarity=0.251  Sum_probs=34.8

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      +.++||+||||.+...                       ..-+.+++.++.+++.|+.|+++|||+-
T Consensus         4 Kli~~D~DGTL~~~~~-----------------------~i~~~~~~al~~l~~~g~~v~~~TGr~~   47 (225)
T d1l6ra_           4 RLAAIDVDGNLTDRDR-----------------------LISTKAIESIRSAEKKGLTVSLLSGNVI   47 (225)
T ss_dssp             CEEEEEHHHHSBCTTS-----------------------CBCHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred             EEEEEecCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            4899999998876421                       1125678888999999999999999984

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.79  E-value=0.00065  Score=54.89  Aligned_cols=45  Identities=13%  Similarity=0.224  Sum_probs=32.4

Q ss_pred             EEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          133 VLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       133 vVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      |+|||||||.+...         ++         .....-+.+++.+++|++ |+.|+++|||+
T Consensus         3 i~~DlDGTL~~~~~---------~~---------~~~~i~~~~~~~l~~l~~-~~~v~i~TGR~   47 (229)
T d1u02a_           3 IFLDYDGTLVPIIM---------NP---------EESYADAGLLSLISDLKE-RFDTYIVTGRS   47 (229)
T ss_dssp             EEEECBTTTBCCCS---------CG---------GGCCCCHHHHHHHHHHHH-HSEEEEECSSC
T ss_pred             EEEEecCCCCCCCC---------Ch---------hhCCCCHHHHHHHHHHhh-CCCEEEEcCCC
Confidence            78999998876421         01         122345678899999987 56799999997

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.76  E-value=0.0022  Score=50.73  Aligned_cols=44  Identities=16%  Similarity=0.150  Sum_probs=33.7

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR  213 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~  213 (290)
                      ...+..+++.++++.+..+|..++++|+...   ......+...+..
T Consensus        72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  115 (210)
T d1j97a_          72 KRITPTEGAEETIKELKNRGYVVAVVSGGFD---IAVNKIKEKLGLD  115 (210)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHHTCS
T ss_pred             hhhhhhhhHHHHHHHHHHcCCEEEeeccccc---ccccchhhccchh
Confidence            4678889999999999999999999998654   3344445555544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.68  E-value=0.0042  Score=49.88  Aligned_cols=95  Identities=9%  Similarity=0.108  Sum_probs=59.2

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcC-
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEG-  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G-  245 (290)
                      ..++.|++.++++.++..| +++++|+-++   .....-|...|+..+ +..+...+....+.     ...+..++..| 
T Consensus        82 ~~~~~~~~~~~l~~l~~~~-~~~i~t~~~~---~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p-----~~~~~~~~~~~~  152 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSY-PLYITTTKDT---STAQDMAKNLEIHHFFDGIYGSSPEAPHKA-----DVIHQALQTHQL  152 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTS-CEEEEEEEEH---HHHHHHHHHTTCGGGCSEEEEECSSCCSHH-----HHHHHHHHHTTC
T ss_pred             cccchhHHHHHHhhhhccc-chhhcccccc---hhhhHHHHhhcccccccccccccccccccc-----cccchhhhhhhc
Confidence            5667999999999998775 8888998653   455567788887654 44444433222211     11222333333 


Q ss_pred             --CeEEEEeCCCcccccCC-CCcceEEEcc
Q 044563          246 --FHITGLISNQMDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 --YrIv~~iGDq~sDl~G~-~~g~r~fkLP  272 (290)
                        -++ ..|||...|+.+. ..|-+++-+.
T Consensus       153 ~~~~~-v~VGDs~~Di~aa~~aGi~~i~v~  181 (210)
T d2ah5a1         153 APEQA-IIIGDTKFDMLGARETGIQKLAIT  181 (210)
T ss_dssp             CGGGE-EEEESSHHHHHHHHHHTCEEEEES
T ss_pred             ccccc-eeecCCHHHHHHHHHcCCeEEEEc
Confidence              244 4799999999764 3466666553

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.67  E-value=0.0013  Score=53.58  Aligned_cols=101  Identities=11%  Similarity=0.108  Sum_probs=61.1

Q ss_pred             hcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCc---ccCcchHHhhHHHHHHHH
Q 044563          167 AKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDN---EMQMDSREYLSRRRTILQ  242 (290)
Q Consensus       167 ~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~---~~~~~~~~yKs~~R~~i~  242 (290)
                      ....++|++.++++.++.   +.+++|+-.   +......|...|...+ +..+....+   ...++...   .-+..++
T Consensus        82 ~~~~~~~g~~~~L~~l~~---~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~---~~~~~~~  152 (222)
T d2fdra1          82 RDVKIIDGVKFALSRLTT---PRCICSNSS---SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPD---IFLHGAA  152 (222)
T ss_dssp             HHCCBCTTHHHHHHHCCS---CEEEEESSC---HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSH---HHHHHHH
T ss_pred             hccchhhhHHHHhhhccc---cceeeeecc---hhhhhhhhcccccccccceeecccccccccccccCHH---HHHHHHH
Confidence            356788999998887765   456788854   4456677888887644 333333221   22232221   2223333


Q ss_pred             hcCC---eEEEEeCCCcccccCC-CCcceEEEccCCccc
Q 044563          243 KEGF---HITGLISNQMDALIGQ-SLGKRVFKLPNPLYY  277 (290)
Q Consensus       243 ~~GY---rIv~~iGDq~sDl~G~-~~g~r~fkLPNPmY~  277 (290)
                      .-|.   +++ .|||...|+.+. ..|-+++-+.+..+.
T Consensus       153 ~l~~~p~~~l-~vgDs~~dv~aA~~aG~~~i~v~~~~~~  190 (222)
T d2fdra1         153 QFGVSPDRVV-VVEDSVHGIHGARAAGMRVIGFTGASHT  190 (222)
T ss_dssp             HHTCCGGGEE-EEESSHHHHHHHHHTTCEEEEECCSTTC
T ss_pred             hhCCCCceEE-EEcCCHHHHHHHHHcCCEEEEEccCCCC
Confidence            3343   455 599999999875 357778888776543

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.00039  Score=54.23  Aligned_cols=100  Identities=16%  Similarity=0.125  Sum_probs=58.2

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccc--hHHHH-HHHHhCCCCCCCcceeecCcccCcc-hHHhhHHHHHHHHhc
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQ--RNATT-ELLISAGYRGWSSLIMRLDNEMQMD-SREYLSRRRTILQKE  244 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~--r~~T~-~NL~~~Gy~~~d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~  244 (290)
                      ....+++.++...++.+|+.++++|+.+...  +.... .+|...    ++..+-......+++ .-.|.. ..+++--.
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~----fd~v~~s~~~~~~Kp~~~~~~~-~~~~~~~~  157 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA----ADHIYLSQDLGMRKPEARIYQH-VLQAEGFS  157 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH----CSEEEEHHHHTCCTTCHHHHHH-HHHHHTCC
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh----ccceeecccccccccchHHHHH-HHHhcCCC
Confidence            3678899999999999999999999875432  22221 233332    233333222112222 222332 22222112


Q ss_pred             CCeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          245 GFHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      .-+ +..|||...|+.+. ..|-+++-+.+|
T Consensus       158 ~~~-~l~vgDs~~di~~A~~aG~~ti~v~~~  187 (197)
T d2b0ca1         158 PSD-TVFFDDNADNIEGANQLGITSILVKDK  187 (197)
T ss_dssp             GGG-EEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             CCe-EEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence            234 55899999999764 568888887665

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0015  Score=52.60  Aligned_cols=41  Identities=15%  Similarity=0.283  Sum_probs=29.5

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      -++||+||||.+...       ..                -|.+.+.+++|+++|+ ++++|||+
T Consensus         3 i~lFDlDGTLl~~~~-------~i----------------s~~~~~~i~~l~~~g~-~~i~tgrr   43 (244)
T d2fuea1           3 LCLFDVDGTLTPARQ-------KI----------------DPEVAAFLQKLRSRVQ-IGVVGGSD   43 (244)
T ss_dssp             EEEEESBTTTBSTTS-------CC----------------CHHHHHHHHHHTTTSE-EEEECSSC
T ss_pred             EEEEccccCccCCCC-------cC----------------CHHHHHHHHHHHhCCC-EEEEecCC
Confidence            355799998876421       11                2457888999999996 66788885

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=96.26  E-value=0.0037  Score=51.44  Aligned_cols=99  Identities=17%  Similarity=0.200  Sum_probs=58.8

Q ss_pred             cEEEEecccccccCh-hhhhhc--cCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH
Q 044563          131 DVVLMDIDDIFASSS-KYSNLL--IDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL  207 (290)
Q Consensus       131 ~AvVfDIDetLsn~~-y~~~~~--~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL  207 (290)
                      +.+|||+||+|.+.. ||...+  +..|+.       .++         .-++.++..|+.+++||+|..   ..+....
T Consensus         6 k~~i~DvDGVlTDG~v~~~~dG~e~k~F~~-------~Dg---------~gi~~l~~~gi~~~iis~~~~---~~v~~~~   66 (177)
T d1k1ea_           6 KFVITDVDGVLTDGQLHYDANGEAIKSFHV-------RDG---------LGIKMLMDADIQVAVLSGRDS---PILRRRI   66 (177)
T ss_dssp             CEEEEECTTTTSCSEEEEETTEEEEEEEEH-------HHH---------HHHHHHHHTTCEEEEEESCCC---HHHHHHH
T ss_pred             eEEEEccCCcccCCeEEEeCCCCEEEEEEC-------cch---------HHHHHHhhhcEEEEEecCCch---hHHHHHH
Confidence            589999999877653 222221  011222       111         126678899999999999864   4566677


Q ss_pred             HhCCCCCCCcceeecCcccCcchHHhhHH-HHHHHHhcC--CeEEEEeCCCccccc
Q 044563          208 ISAGYRGWSSLIMRLDNEMQMDSREYLSR-RRTILQKEG--FHITGLISNQMDALI  260 (290)
Q Consensus       208 ~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~-~R~~i~~~G--YrIv~~iGDq~sDl~  260 (290)
                      ++.|+.    .++....+        |.. .++-++..|  ..=++.|||...|+.
T Consensus        67 ~~l~~~----~~~~~~~~--------K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~  110 (177)
T d1k1ea_          67 ADLGIK----LFFLGKLE--------KETACFDLMKQAGVTAEQTAYIGDDSVDLP  110 (177)
T ss_dssp             HHHTCC----EEEESCSC--------HHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             hhhccc----cccccccc--------HHHHHHHHHHHhcCCcceeEEecCCccHHH
Confidence            777763    23322221        211 222233334  455899999999996

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=96.22  E-value=0.0026  Score=52.09  Aligned_cols=95  Identities=14%  Similarity=0.079  Sum_probs=58.0

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.|++++.++.++  |..+.++|+....   ....-+...|+..+ +.++--.+....|.. -.|+    ..+++.|
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~---~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~----~a~~~lg  161 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPD---MLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYA----LVEEVLG  161 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHH----HHHHHHC
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchH---HHHHHHhhcccccccccccccccccccCccHHHHH----HHHHHhC
Confidence            4578899999999885  7788889987643   33455667776543 344433222222322 2233    2333334


Q ss_pred             CeE--EEEeCCCcccccCC-CCcceEEEc
Q 044563          246 FHI--TGLISNQMDALIGQ-SLGKRVFKL  271 (290)
Q Consensus       246 YrI--v~~iGDq~sDl~G~-~~g~r~fkL  271 (290)
                      .+-  +..|||+..|+.+. ..|-+++-+
T Consensus       162 ~~p~e~l~VgD~~~di~~A~~aG~~tv~v  190 (245)
T d1qq5a_         162 VTPAEVLFVSSNGFDVGGAKNFGFSVARV  190 (245)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred             CChhhEEEEeCCHHHHHHHHHcCCeEEEE
Confidence            322  57899999999875 346667655

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.12  E-value=0.0064  Score=50.03  Aligned_cols=98  Identities=9%  Similarity=0.195  Sum_probs=62.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcch-HHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDS-REYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~-~~yKs~~R~~i~~~G  245 (290)
                      ..++.|+++++++.|+ .|+++.++||-+   +......|+..|+..+ +.++.-.+...+|+. .-|+    ..+++.|
T Consensus       107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~---~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~----~~~~~~~  178 (247)
T d2gfha1         107 HMILADDVKAMLTELR-KEVRLLLLTNGD---RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFY----HCCDLLG  178 (247)
T ss_dssp             TCCCCHHHHHHHHHHH-TTSEEEEEECSC---HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHH----HHHHHHT
T ss_pred             cCccCccHHHHHHHhh-cccceEEeeccc---chhhhhhhhhccccccccccccccccccchhhhhhHH----HHHHHhh
Confidence            3577899999999998 589999999954   5667777888897653 555543322223322 2233    2333333


Q ss_pred             C---eEEEEeCCCc-ccccCC-CCcceEEEccCC
Q 044563          246 F---HITGLISNQM-DALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 Y---rIv~~iGDq~-sDl~G~-~~g~r~fkLPNP  274 (290)
                      .   +++ .|||++ +|+.+. ..|-+++.+-|+
T Consensus       179 ~~~~~~l-~iGD~~~~Di~~A~~~G~~~~~~~~~  211 (247)
T d2gfha1         179 VQPGDCV-MVGDTLETDIQGGLNAGLKATVWINK  211 (247)
T ss_dssp             CCGGGEE-EEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred             cCHHhcc-eeccChHhHHHHHHHcCCeEEEEECC
Confidence            2   444 799997 799865 356665544344

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.95  E-value=0.0036  Score=51.86  Aligned_cols=55  Identities=11%  Similarity=0.202  Sum_probs=35.4

Q ss_pred             cEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhC
Q 044563          131 DVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISA  210 (290)
Q Consensus       131 ~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~  210 (290)
                      -.+++||||||.+...                         .+..++-+.+++++|+.|+++|||+-.   ...+-++..
T Consensus         4 ~li~~DlDGTL~~~~~-------------------------~~~~~~~~~~~~~~g~~v~i~TGR~~~---~~~~~~~~~   55 (244)
T d1s2oa1           4 LLLISDLDNTWVGDQQ-------------------------ALEHLQEYLGDRRGNFYLAYATGRSYH---SARELQKQV   55 (244)
T ss_dssp             EEEEECTBTTTBSCHH-------------------------HHHHHHHHHHTTGGGEEEEEECSSCHH---HHHHHHHHH
T ss_pred             eEEEEECcccCCCCCC-------------------------CHHHHHHHHHHHcCCCEEEEECCCCHH---HHHHHHHHc
Confidence            3677899998875421                         112233345578899999999999733   334455555


Q ss_pred             CCC
Q 044563          211 GYR  213 (290)
Q Consensus       211 Gy~  213 (290)
                      |+.
T Consensus        56 ~~~   58 (244)
T d1s2oa1          56 GLM   58 (244)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            654

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.88  E-value=0.0068  Score=49.44  Aligned_cols=99  Identities=13%  Similarity=0.017  Sum_probs=60.7

Q ss_pred             cCcCcHHHHHHHHHHHhCC-CeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcchHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRG-WPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~G-v~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~~yKs~~R~~i~~~G  245 (290)
                      ..++.||+.++++.|+++| +++.++||.+   +......|+..|+..+ +.++...+...+++....--..-+++...|
T Consensus        89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~  165 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRSDVLLGLLTGNF---EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGAN  165 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSC---HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred             CceecCchHHHHhhhhccccccccccCCCc---chhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccC
Confidence            3467899999999999998 8999999985   4567788999998755 444433322222221111000111121113


Q ss_pred             ---CeEEEEeCCCcccccCC-CCcceEEE
Q 044563          246 ---FHITGLISNQMDALIGQ-SLGKRVFK  270 (290)
Q Consensus       246 ---YrIv~~iGDq~sDl~G~-~~g~r~fk  270 (290)
                         -++ .+|||...|+.+. ..|-+++-
T Consensus       166 ~~p~~~-l~VGD~~~Di~aA~~aG~~~i~  193 (228)
T d2hcfa1         166 YSPSQI-VIIGDTEHDIRCARELDARSIA  193 (228)
T ss_dssp             CCGGGE-EEEESSHHHHHHHHTTTCEEEE
T ss_pred             CChhHh-eeecCChHHHHHHHHcCCEEEE
Confidence               234 4699999999864 35665543

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.72  E-value=0.006  Score=51.32  Aligned_cols=42  Identities=17%  Similarity=0.135  Sum_probs=30.6

Q ss_pred             EEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCc
Q 044563          132 VVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHE  197 (290)
Q Consensus       132 AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e  197 (290)
                      .++|||||||.+...                       ..-|.+.+.++.+++. +.+++.|||+-
T Consensus         4 li~~DlDGTL~~~~~-----------------------~i~~~~~~al~~l~~~-~~~~i~TGR~~   45 (267)
T d1nf2a_           4 VFVFDLDGTLLNDNL-----------------------EISEKDRRNIEKLSRK-CYVVFASGRML   45 (267)
T ss_dssp             EEEEECCCCCSCTTS-----------------------CCCHHHHHHHHHHTTT-SEEEEECSSCH
T ss_pred             EEEEeCCccccCCcC-----------------------ccCHHHHHHHHHHHcC-CEEEEECCCCh
Confidence            789999998876311                       1124577778888765 47999999984

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.01  Score=47.67  Aligned_cols=101  Identities=11%  Similarity=-0.016  Sum_probs=63.2

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcceee--cCccc-CcchHHhhHHHHHHHHhcC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLIMR--LDNEM-QMDSREYLSRRRTILQKEG  245 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~LiLR--~~~~~-~~~~~~yKs~~R~~i~~~G  245 (290)
                      ..+.|++.+++++|+++|+++.++||.+.   ......+...|+.++-..+.-  ..... .++...|....+ ++--..
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~-~~~~~p  201 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSV---EAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIAD-SIGCST  201 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHH-HHTSCG
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcH---HHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHH-HhCCCc
Confidence            45789999999999999999999999764   455566777776544222211  11111 222333443332 222122


Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -+ +.+|||...|+.+. ..|-+++-+.-|
T Consensus       202 ~~-~l~vgD~~~dv~aA~~aG~~ti~v~r~  230 (253)
T d1zs9a1         202 NN-ILFLTDVTREASAAEEADVHVAVVVRP  230 (253)
T ss_dssp             GG-EEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred             Cc-EEEEeCCHHHHHHHHHcCCEEEEEeCC
Confidence            34 45799999999875 468788777433

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.49  E-value=0.011  Score=46.49  Aligned_cols=76  Identities=11%  Similarity=0.045  Sum_probs=53.6

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHH-HhCCCCCCCcceeecCcccCcchHHhhHHHHHHHHhcCCe
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELL-ISAGYRGWSSLIMRLDNEMQMDSREYLSRRRTILQKEGFH  247 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL-~~~Gy~~~d~LiLR~~~~~~~~~~~yKs~~R~~i~~~GYr  247 (290)
                      ++.-|++.+..+.|++.|++|.+|||..+.    |.+++ ++.|+.   ..+.+-..       +-|...-++++ .|+ 
T Consensus        20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~----~a~~ia~~lgI~---~v~~~~~p-------~~k~~~v~~~q-~~~-   83 (135)
T d2b8ea1          20 DTLKESAKPAVQELKRMGIKVGMITGDNWR----SAEAISRELNLD---LVIAEVLP-------HQKSEEVKKLQ-AKE-   83 (135)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHH----HHHHHHHHHTCS---EEECSCCH-------HHHHHHHHHHT-TTS-
T ss_pred             CCCCccHHHHHHHHHHcCCEEEEEcCcchh----hhhHHHhhhhhh---hhccccch-------hHHHHHHHHHH-cCC-
Confidence            466778999999999999999999997653    55555 456874   34433211       24555555554 444 


Q ss_pred             EEEEeCCCccccc
Q 044563          248 ITGLISNQMDALI  260 (290)
Q Consensus       248 Iv~~iGDq~sDl~  260 (290)
                      .++++||-.+|..
T Consensus        84 ~v~~vGDg~nD~~   96 (135)
T d2b8ea1          84 VVAFVGDGINDAP   96 (135)
T ss_dssp             CEEEEECSSSSHH
T ss_pred             EEEEEeCCCCcHH
Confidence            7899999999986

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.29  E-value=0.036  Score=44.88  Aligned_cols=88  Identities=10%  Similarity=-0.002  Sum_probs=55.5

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCCcce----eecC-----------------cccC
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWSSLI----MRLD-----------------NEMQ  227 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d~Li----LR~~-----------------~~~~  227 (290)
                      +|+-|++.+.++.|++.|++|.++||=+.   ..+..-=++.|+..-..-+    +...                 .--.
T Consensus        19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~---~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~a   95 (168)
T d1wpga2          19 DPPRKEVMGSIQLCRDAGIRVIMITGDNK---GTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFA   95 (168)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEE
T ss_pred             CCCchhHHHHHHHHHHCcCEEEEECCCCH---HHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhh
Confidence            47889999999999999999999999542   2333333456764221110    0000                 0000


Q ss_pred             cchHHhhHHHHHHHHhcCCeEEEEeCCCccccc
Q 044563          228 MDSREYLSRRRTILQKEGFHITGLISNQMDALI  260 (290)
Q Consensus       228 ~~~~~yKs~~R~~i~~~GYrIv~~iGDq~sDl~  260 (290)
                      .-..+-|...-+.+++.||. ++.+||-.+|..
T Consensus        96 r~~p~~K~~lv~~l~~~g~~-Va~vGDG~nD~~  127 (168)
T d1wpga2          96 RVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAP  127 (168)
T ss_dssp             SCCHHHHHHHHHHHHHTTCC-EEEEECSGGGHH
T ss_pred             ccchhHHHHHHHHHHhcccc-eeEEecCCCCHH
Confidence            01223566667778888765 789999999985

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.00  E-value=0.019  Score=46.72  Aligned_cols=97  Identities=13%  Similarity=0.121  Sum_probs=60.5

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCC-CcceeecCcccCcc-hHHhhHHHHHHHHhcC
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGW-SSLIMRLDNEMQMD-SREYLSRRRTILQKEG  245 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~-~~~yKs~~R~~i~~~G  245 (290)
                      ..++.|+++++++.|+ .|+++.++||-+   +......|+..|+.++ +..+...+-..+|+ .-.|+..    +++.|
T Consensus        98 ~~~~~p~~~~~L~~l~-~~~~i~i~Sn~~---~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~----~~~l~  169 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GKYHVGMITDSD---TEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELA----LKKAG  169 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TTBEEEEEESSC---HHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHH----HHHHT
T ss_pred             hCcccccHHHHHHHhh-ccCceeeeeccc---cccchhhhcccccccccccccccccccccchhhHHHHHH----Hhhhc
Confidence            3567899999999996 589999999954   4556667888897643 55554322222222 2234433    33333


Q ss_pred             CeE--EEEeCCC-cccccCC-CCcceEEEcc
Q 044563          246 FHI--TGLISNQ-MDALIGQ-SLGKRVFKLP  272 (290)
Q Consensus       246 YrI--v~~iGDq-~sDl~G~-~~g~r~fkLP  272 (290)
                      ...  +..|||+ .+|+.+. ..|-+++-++
T Consensus       170 ~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~  200 (230)
T d1x42a1         170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLD  200 (230)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred             ccccccceeecCcHhHHHHHHHcCCEEEEEC
Confidence            321  4568998 5799863 4566666554

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.83  E-value=0.0073  Score=50.70  Aligned_cols=56  Identities=11%  Similarity=0.182  Sum_probs=38.2

Q ss_pred             CcEEEEecccccccChhhhhhccCCCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCC
Q 044563          130 LDVVLMDIDDIFASSSKYSNLLIDRVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKH  196 (290)
Q Consensus       130 ~~AvVfDIDetLsn~~y~~~~~~G~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~  196 (290)
                      ..+++||.||||-....... +  ..++..|.        .-.|++.+.++.|.++|+.||+|||-+
T Consensus        21 ~Kia~fDrDGtLik~~~~~~-~--~~~~~d~~--------~l~~~v~~~i~~L~~~gy~iiIvTNQ~   76 (195)
T d1yj5a1          21 GKVAAFDLDGTLITTRSGKV-F--PTSPSDWR--------ILYPEIPKKLQELAAEGYKLVIFTNQM   76 (195)
T ss_dssp             SCEEEECSBTTTEECSSSCS-S--CSSTTCCE--------ESCTTHHHHHHHHHHHTCEEEEEEECH
T ss_pred             CcEEEEECCCceEeeCCCCc-C--CCChhhce--------eccCCHHHHHHHHHhCCcEEEEecCcc
Confidence            46999999998865421000 0  12333341        124789999999999999999999964

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.73  E-value=0.014  Score=46.78  Aligned_cols=110  Identities=10%  Similarity=0.006  Sum_probs=66.3

Q ss_pred             cCcCcHHHHHHHHHHHhCCCeEEEecCCCcc-chHHHHHHHHhCCCCCC-CcceeecCcccCcchH-HhhHHHHHHHHhc
Q 044563          168 KHLKHMFTLKLFMKLQVRGWPVILLSRKHEG-QRNATTELLISAGYRGW-SSLIMRLDNEMQMDSR-EYLSRRRTILQKE  244 (290)
Q Consensus       168 ~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~-~r~~T~~NL~~~Gy~~~-d~LiLR~~~~~~~~~~-~yKs~~R~~i~~~  244 (290)
                      ...+.|+++++++.|+++|+++.++|+.... ........+...|+.++ |.++--.+...+|+.. .|.. ..+++.-.
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~-~~~~~~v~  173 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNF-LLDTLKAK  173 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHH-HHHHHTSC
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHH-HHHHhCCC
Confidence            3567899999999999999999999986432 23333334455554432 3333222212233322 3433 22233223


Q ss_pred             CCeEEEEeCCCcccccCC-CCcceEEEccCCccccc
Q 044563          245 GFHITGLISNQMDALIGQ-SLGKRVFKLPNPLYYSF  279 (290)
Q Consensus       245 GYrIv~~iGDq~sDl~G~-~~g~r~fkLPNPmY~~w  279 (290)
                      .-++++ |||...|+.+. ..|-+++-+.+|.-...
T Consensus       174 p~~~l~-IgD~~~Di~~A~~aG~~ti~V~~~~~~~~  208 (222)
T d1cr6a1         174 PNEVVF-LDDFGSNLKPARDMGMVTILVHNTASALR  208 (222)
T ss_dssp             TTSEEE-EESSSTTTHHHHHHTCEEEECCSSSHHHH
T ss_pred             cceEEE-EECCHHHHHHHHHcCCEEEEECCcchHHH
Confidence            345654 69999999875 35778888887765443

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.51  E-value=0.16  Score=39.23  Aligned_cols=87  Identities=9%  Similarity=0.076  Sum_probs=47.1

Q ss_pred             CcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCCCCC--cceeecCccc---CcchHHhhHHHHHHHHh
Q 044563          169 HLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYRGWS--SLIMRLDNEM---QMDSREYLSRRRTILQK  243 (290)
Q Consensus       169 apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~~~d--~LiLR~~~~~---~~~~~~yKs~~R~~i~~  243 (290)
                      .+..++...+.+.+ ..++.++++|+   .....+.......++..+.  .+........   .......+....+++.-
T Consensus        68 ~~~~~~~~~~~~~~-~~~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  143 (206)
T d1rkua_          68 LKPLEGAVEFVDWL-RERFQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS  143 (206)
T ss_dssp             CCCCTTHHHHHHHH-HTTSEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHh-hcCceEEEecc---CchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcc
Confidence            34455565555554 57888998886   4466777777888876332  2222211110   00011122233333433


Q ss_pred             cCCeEEEEeCCCccccc
Q 044563          244 EGFHITGLISNQMDALI  260 (290)
Q Consensus       244 ~GYrIv~~iGDq~sDl~  260 (290)
                      ..-++ ..|||..+|+.
T Consensus       144 ~~~ev-iaiGDg~NDi~  159 (206)
T d1rkua_         144 LYYRV-IAAGDSYNDTT  159 (206)
T ss_dssp             TTCEE-EEEECSSTTHH
T ss_pred             cccce-EEecCCccCHH
Confidence            44444 56899999996

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.50  E-value=0.062  Score=42.43  Aligned_cols=28  Identities=14%  Similarity=0.076  Sum_probs=21.0

Q ss_pred             CeEEEEeCCCcccccCC-CCcceEEEccCC
Q 044563          246 FHITGLISNQMDALIGQ-SLGKRVFKLPNP  274 (290)
Q Consensus       246 YrIv~~iGDq~sDl~G~-~~g~r~fkLPNP  274 (290)
                      -++ ..|||...|+.|. ..|-+++-+.+|
T Consensus       177 ~e~-l~VgD~~~Dv~~A~~aG~~ti~v~r~  205 (225)
T d2g80a1         177 SEV-LFLSDNPLELDAAAGVGIATGLASRP  205 (225)
T ss_dssp             GGE-EEEESCHHHHHHHHTTTCEEEEECCT
T ss_pred             hhc-eeecCCHHHHHHHHHcCCEEEEEeCC
Confidence            444 5779999999885 468888887655

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.47  E-value=0.074  Score=43.18  Aligned_cols=80  Identities=14%  Similarity=0.103  Sum_probs=47.5

Q ss_pred             CCCCCcEEEEecccccccChhhhhhc--cC---CCCccchHHHHHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccch
Q 044563          126 SYNGLDVVLMDIDDIFASSSKYSNLL--ID---RVNVRGYIECIEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQR  200 (290)
Q Consensus       126 ~~~g~~AvVfDIDetLsn~~y~~~~~--~G---~~~~~~w~~Wv~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r  200 (290)
                      ...+|..+|+|+||||-.+..-....  +.   .++....     ..--..-|++.+|++.+.+. ++|++-|.=.+...
T Consensus        11 ~~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~-----~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA   84 (181)
T d1ta0a_          11 QDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVH-----QVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYA   84 (181)
T ss_dssp             GGTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEE-----EEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHH
T ss_pred             ccCCCeEEEEeCCCCEEccccCCCCCccceeeecccceee-----eeEEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHH
Confidence            34567899999999776532100000  00   0000000     00113478999999999865 99999998776666


Q ss_pred             HHHHHHHHhCC
Q 044563          201 NATTELLISAG  211 (290)
Q Consensus       201 ~~T~~NL~~~G  211 (290)
                      +.=++.|.-.+
T Consensus        85 ~~il~~ldp~~   95 (181)
T d1ta0a_          85 DPVADLLDKWG   95 (181)
T ss_dssp             HHHHHHHCSSC
T ss_pred             HHHHHHhccCC
Confidence            66666664433

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.92  E-value=1.6  Score=37.85  Aligned_cols=47  Identities=26%  Similarity=0.356  Sum_probs=40.3

Q ss_pred             HHhhcCcCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC
Q 044563          164 IEEAKHLKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR  213 (290)
Q Consensus       164 v~~~~apaip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~  213 (290)
                      +.....+-.||+.+|++.|+++|+.++++||   ........=|+..|+.
T Consensus       129 v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~lg~~  175 (291)
T d2bdua1         129 VADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVY  175 (291)
T ss_dssp             HHHSCCCBCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred             HHhcCCCcccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHcCCC
Confidence            3334567789999999999999999999999   5678888899999986

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=83.10  E-value=0.5  Score=42.06  Aligned_cols=41  Identities=12%  Similarity=0.007  Sum_probs=33.4

Q ss_pred             cCcHHHHHHHHHHHhCCCeEEEecCCCccchHHHHHHHHhCCCC
Q 044563          170 LKHMFTLKLFMKLQVRGWPVILLSRKHEGQRNATTELLISAGYR  213 (290)
Q Consensus       170 paip~~l~l~~~l~~~Gv~V~~iSgR~e~~r~~T~~NL~~~Gy~  213 (290)
                      +|.|++.++++.|+++|++|.++||++.   ..+..-|++.|..
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~---~~a~~il~~lgl~  255 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPY---TETVVPFENLGLL  255 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHHHTCG
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCH---HHHHHHHHHcCCc
Confidence            4778999999999999999999999975   4555556666754