Citrus Sinensis ID: 044708

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
MKFCKKYEEYMQQKQQKLPKVACKKLKKILKKCRLACQSQKDPESNSNADGVAQIKITSCHNRCPVCDGAFFPTLVNDMSAVVRYFNKRAKKLINLHQAAGLKKYFLWIKGKMQGQGTHVSSLIEQGKELVVYALINAIMIRKILKKYDKSPWLRELMALHINLGETNVSSSTMAAMSSEGYRLTFNDDKLSLSCELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQASVFMLFLQIYLINGCYINSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI
ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHcccccccccccccccccccccccccccccccccHHHccccccEEccccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
*KFCKKYEEYM********KVACKKLKKILKKCRLA**********************SCHNRCPVCDGAFFPTLVNDMSAVVRYFNKRAKKLINLHQAAGLKKYFLWIKGKMQGQGTHVSSLIEQGKELVVYALINAIMIRKILKKYDKSPWLRELMALHINLGETNV**********EGYRLTFNDDKLSLSCELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQASVFMLFLQIYLINGCYINSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI
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MKFCKKYEEYMQQKQQKLPKVACKKLKKILKKCRLACQSQKDPESNSNADGVAQIKITSCHNRCPVCDGAFFPTLVNDMSAVVRYFNKRAKKLINLHQAAGLKKYFLWIKGKMQGQGTHVSSLIEQGKELVVYALINAIMIRKILKKYDKSPWLRELMALHINLGETNVSSSTMAAMSSEGYRLTFNDDKLSLSCELFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPREKCPLCRQASVFMLFLQIYLINGCYINSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable E3 ubiquitin-protein ligase BAH1-like 2 probableQ7XI73
Probable E3 ubiquitin-protein ligase BAH1-like 1 probableB8B5U8
E3 ubiquitin-protein ligase BAH1 Mediates E2-dependent protein ubiquitination. Plays a role in salicylic acid-mediated negative feedback regulation of salicylic acid (SA) accumulation. May be involved in the overall regulation of SA, benzoic acid and phenylpropanoid biosynthesis. Controls the adaptability to nitrogen limitation by channeling the phenylpropanoid metabolic flux to the induced anthocyanin synthesis.probableQ9SRX9

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2EGP, chain A
Confidence level:very confident
Coverage over the Query: 202-267
View the alignment between query and template
View the model in PyMOL
Template: 2CKL, chain A
Confidence level:confident
Coverage over the Query: 202-237,249-291
View the alignment between query and template
View the model in PyMOL