Citrus Sinensis ID: 044721

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAPPRDK
Secondary Structure (PSIPRED)
cccccEEEEEccccccHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHcccEEEEcccccHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHcccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHEEEccEEEEcccccccHHHHHHHHHHHHcccccEEccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccEEEEEccHHHHHHHHHHHHHHHHHccccEcccHHcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHccccEEcccHcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRestlsapsksQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAgnikrffpsefgndvdrvhavepaksafATKAKIRRAVEaegipytygdvlnhgsLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEagnvkrffpsefgndvdrvnavepaksaFVTKAKIRRAVeaegipytyvasnffagyflpnlsqpgatapprdk
Flexible Loop (DISEMBL)
MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEpaksafatkakIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEpaksafvtkakiRRAVEAEGIPYTYVASNFFAGYFLPnlsqpgatapprdk
Low Complexity Region (SEG)
MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAPPRDK
Disordered region (IsUnstruct)
******ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS****SQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPN*************
Disordered Region (DISOPRED)
**SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE**************FKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQ**********
Disordered Region (DISEMBL)
MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQP*********
Disordered Region (DISPRO)
***KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGAT******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAPPRDK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	263	2.2.26 [Sep-21-2011]
P52578	308	Isoflavone reductase homo	N/A	no	0.566	0.483	0.825	1e-65
E1U332	308	Isoflavone reductase-like	N/A	no	0.566	0.483	0.724	6e-58
P52577	310	Isoflavone reductase homo	no	no	0.547	0.464	0.732	2e-54
P52579	310	Isoflavone reductase homo	N/A	no	0.566	0.480	0.691	4e-54
P52575	318	Isoflavone reductase OS=M	N/A	no	0.623	0.515	0.527	3e-45
Q00016	318	Isoflavone reductase OS=C	N/A	no	0.623	0.515	0.533	2e-43
P52576	318	Isoflavone reductase OS=P	N/A	no	0.623	0.515	0.511	2e-43
P52580	309	Isoflavone reductase homo	N/A	no	0.566	0.482	0.58	2e-42
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.555	0.452	0.517	3e-35
Q15GI4	314	Eugenol synthase 1 OS=Oci	N/A	no	0.539	0.452	0.513	1e-34

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score =  249 bits (636), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/149 (82%), Positives = 134/149 (89%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA KSKILFIGGTGYIGKFIVEAS KAGH TFVLVRESTLS P+K++L+D FK  GV  V
Sbjct: 1   MAGKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFV 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ +HESLVKAIKQVDVVISTVGH LL DQVK+IAAIKEAGN+KRFFPSEFGNDVDRV
Sbjct: 61  HGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           HAVEPAK+AF TKA+IRR VEAEGIP+TY
Sbjct: 121 HAVEPAKAAFNTKAQIRRVVEAEGIPFTY 149

Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score =  224 bits (570), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 125/149 (83%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA K+KIL IGGTGYIGKFIVEAS K+ HPTF L REST+S P K +++  FK  GV ++
Sbjct: 1   MADKTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTIL 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ +HESLVKAIKQVDVVISTVG   L DQVKIIAAIKEAGN+KRFFPS+FG DVDR 
Sbjct: 61  TGDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVDRC 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           HAVEPAKS+F  K++IRRA+EAEGIPYT+
Sbjct: 121 HAVEPAKSSFEIKSQIRRAIEAEGIPYTF 149

Olea europaea (taxid: 4146)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score =  213 bits (541), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 120/146 (82%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KSKIL IGGTGYIGKF+VEAS KAGH TF LVRE+TLS P K + +  FK LGV ++ GD
Sbjct: 5   KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGD 64

Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           + +HESLVKAIKQVDVVISTVG   + DQ KII+AIKEAGN+KRF PSEFG DVDR  AV
Sbjct: 65  LNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTSAV 124

Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
           EPAKSAFA K +IRR +EAEGIPYTY
Sbjct: 125 EPAKSAFAGKIQIRRTIEAEGIPYTY 150

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score =  211 bits (538), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 117/149 (78%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           ++ KSKIL IGGTGYIGK++VE S K+GHPTF L+RESTL  P KS+L+D FK  GV L+
Sbjct: 3   VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLL 62

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ N ESL+KAIKQVDVVISTVG     DQV II AIKEAGNIKRF PSEFG DVD  
Sbjct: 63  FGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHA 122

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
            A+EPA S FA K +IRR +EAEGIPYTY
Sbjct: 123 RAIEPAASLFALKVRIRRMIEAEGIPYTY 151

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1

 Score =  181 bits (460), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/180 (52%), Positives = 128/180 (71%), Gaps = 16/180 (8%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES----------TLSAP-SKSQLL 49
           MA+++KIL +G TG IG+ IV AS+KAG+PT+ LVR++          T + P +K +L+
Sbjct: 1   MATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELI 60

Query: 50  DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF 109
           D+++ LGV L+ GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII AIKEAGN+K+FF
Sbjct: 61  DNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 120

Query: 110 PSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH---GSLVKAIKQVD 166
           PSEFG DVDR  AVEP +  F  KA IRR +EAEG+PYTY  +  H   G  ++ + Q+D
Sbjct: 121 PSEFGLDVDRHEAVEPVRQVFEEKASIRRVIEAEGVPYTY--LCCHAFTGYFLRNLAQLD 178

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1

 Score =  176 bits (445), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 124/180 (68%), Gaps = 16/180 (8%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES--TLSAPS---------KSQLL 49
           MAS+++IL +G TG IG+ +V AS+KAG+PT+ L+R++   ++ PS         K +LL
Sbjct: 1   MASQNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELL 60

Query: 50  DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF 109
             FK  GV L+ GD+ +HE+LVKAIKQVD VI T G  L+ DQVKII AIKEAGN+KRFF
Sbjct: 61  QSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFF 120

Query: 110 PSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH---GSLVKAIKQVD 166
           PSEFG DVDR  AV+P +  F  KA IRR VEAEG+PYTY  +  H   G  ++ + Q D
Sbjct: 121 PSEFGLDVDRHDAVDPVRPVFDEKASIRRVVEAEGVPYTY--LCCHAFTGYFLRNLAQFD 178

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins.

Cicer arietinum (taxid: 3827)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1

 Score =  175 bits (444), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/180 (51%), Positives = 125/180 (69%), Gaps = 16/180 (8%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST--LSAP---------SKSQLL 49
           MA+++KIL +G TG IG+ IV AS+KAG+PT+ LVR+++  ++ P         +K +LL
Sbjct: 1   MATENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELL 60

Query: 50  DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF 109
            +++  GV L+ GD+ +HE+LV AIKQVD VI   G  L+ DQVK+I AIKEAGN+KRFF
Sbjct: 61  KNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFF 120

Query: 110 PSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH---GSLVKAIKQVD 166
           PSEFG DVDR  AVEP +  F  KA IRR VE+EG+PYTY  +  H   G  ++ + Q+D
Sbjct: 121 PSEFGLDVDRHDAVEPVRQVFEEKASIRRVVESEGVPYTY--LCCHAFTGYFLRNLAQID 178

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score =  172 bits (436), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/150 (58%), Positives = 107/150 (71%), Gaps = 1/150 (0%)

Query: 1   MAS-KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL 59
           MAS KSKIL +GGTGY+G+ +V AS + GHPT  LVR++  S P+K+ LL  F+  GV L
Sbjct: 1   MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 60

Query: 60  VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
           + GD+ +  SLV A+K  DVVIS +G   + DQ +++ AIKEAGN+KRFFPSEFG DVDR
Sbjct: 61  LKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDR 120

Query: 120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
              VEPAKS    K  IRRA EA GIPYTY
Sbjct: 121 TGIVEPAKSILGAKVGIRRATEAAGIPYTY 150

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/147 (51%), Positives = 100/147 (68%), Gaps = 1/147 (0%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE-STLSAPSKSQLLDHFKKLGVNLVIG 62
           K KIL +G TGY+GK++V+AS+  GHPT+  V      S  SK QLL  F+ LGV +  G
Sbjct: 5   KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYG 64

Query: 63  DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHA 122
           ++  H+ LV   K+VD+VIST+      +Q+K+I AIKEAGNIKRF PSEFGN+VDRV A
Sbjct: 65  ELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVRA 124

Query: 123 VEPAKSAFATKAKIRRAVEAEGIPYTY 149
           +   ++    K KIRRA EA GIP+T+
Sbjct: 125 LPRFQAVLDNKKKIRRATEAAGIPFTF 151

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 9

>sp|Q15GI4|EGS1_OCIBA Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1

 Score =  147 bits (370), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 100/146 (68%), Gaps = 4/146 (2%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KSKIL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F+ LG  +V G+
Sbjct: 7   KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGE 62

Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           +  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGNIKRF PS+FG + DR++A+
Sbjct: 63  LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINAL 122

Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
            P ++    K  IRRA+E   IPYTY
Sbjct: 123 PPFEALIERKRMIRRAIEEANIPYTY 148

Catalyzes the synthesis of the phenylpropene eugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Eugenol is a characteristic aromatic constituent of spices.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
3243234	308	isoflavone reductase related protein [Py	0.566	0.483	0.825	2e-64
351726399	310	isoflavone reductase homolog 2 [Glycine	0.558	0.474	0.823	4e-64
255640090	310	unknown [Glycine max]	0.558	0.474	0.823	4e-64
388499526	310	unknown [Medicago truncatula]	0.558	0.474	0.825	8e-64
1708422	308	RecName: Full=Isoflavone reductase homol	0.566	0.483	0.825	8e-64
255637547	310	unknown [Glycine max]	0.558	0.474	0.816	1e-63
118486357	306	unknown [Populus trichocarpa]	0.551	0.473	0.834	3e-63
224122240	303	phenylcoumaran benzylic ether reductase	0.555	0.481	0.815	5e-63
6525021	310	isoflavone reductase-like NAD(P)H-depend	0.558	0.474	0.812	1e-62
224105373	306	phenylcoumaran benzylic ether reductase	0.551	0.473	0.827	5e-62

>gi|3243234|gb|AAC24001.1| isoflavone reductase related protein [Pyrus communis]

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 123/149 (82%), Positives = 138/149 (92%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MASKS+ILFIGGTGYIGKFIVEAS KAG+PT+VLVRE++LS P+KS+++++FK LGVN V
Sbjct: 1   MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIENFKALGVNFV 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
           +GD+ +HESLVKAIKQVDVVISTVGH  L DQ KIIAAIKEAGN+KRFFPSEFGNDVDR 
Sbjct: 61  LGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIKEAGNVKRFFPSEFGNDVDRS 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           HAVEPAKSAF TKAKIRRAVEAEGIPYTY
Sbjct: 121 HAVEPAKSAFETKAKIRRAVEAEGIPYTY 149

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726399|ref|NP_001237637.1| isoflavone reductase homolog 2 [Glycine max] gi|6573171|gb|AAF17578.1|AF202184_1 isoflavone reductase homolog 2 [Glycine max]

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 136/147 (92%)

Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIG 62
           SKSKILFIGGTGYIGKFIVEAS KAGHPTF+LVRESTLS P+KS L+D+FK LGVNLV+G
Sbjct: 5   SKSKILFIGGTGYIGKFIVEASAKAGHPTFLLVRESTLSNPAKSPLIDNFKGLGVNLVLG 64

Query: 63  DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHA 122
           D+ +H+SLV AIKQVDVVISTVGH  L DQ KII+AIKEAGN+K+F+PSEFGNDVDR HA
Sbjct: 65  DLYDHQSLVSAIKQVDVVISTVGHLQLADQDKIISAIKEAGNVKKFYPSEFGNDVDRTHA 124

Query: 123 VEPAKSAFATKAKIRRAVEAEGIPYTY 149
           VEPAKSAFATKAK+RRA+EAEGIP+TY
Sbjct: 125 VEPAKSAFATKAKVRRAIEAEGIPFTY 151

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255640090|gb|ACU20336.1| unknown [Glycine max]

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 136/147 (92%)

Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIG 62
           SKSKILFIGGTGYIGKFIVEAS KAGHPTF+LVRESTLS P+KS L+D+FK LGVNLV+G
Sbjct: 5   SKSKILFIGGTGYIGKFIVEASAKAGHPTFLLVRESTLSNPAKSPLIDNFKGLGVNLVLG 64

Query: 63  DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHA 122
           D+ +H+SLV AIKQVDVVISTVGH  L DQ KII+AIKEAGN+K+F+PSEFGNDVDR HA
Sbjct: 65  DLYDHQSLVSAIKQVDVVISTVGHLQLADQDKIISAIKEAGNVKKFYPSEFGNDVDRTHA 124

Query: 123 VEPAKSAFATKAKIRRAVEAEGIPYTY 149
           VEPAKSAFATKAK+RRA+EAEGIP+TY
Sbjct: 125 VEPAKSAFATKAKVRRAIEAEGIPFTY 151

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499526|gb|AFK37829.1| unknown [Medicago truncatula]

 Score =  249 bits (636), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 123/149 (82%), Positives = 135/149 (90%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA KSKILFIGGTGYIGK IVEAS KAGHPTF LVRESTL+ P+K+ LL++FK LGVNLV
Sbjct: 1   MAEKSKILFIGGTGYIGKHIVEASAKAGHPTFALVRESTLADPAKANLLNNFKTLGVNLV 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ NHE+LVKAIKQVDVVISTVGH  + DQVKIIAAIKEAGN+KRFFPSEFGNDVDRV
Sbjct: 61  PGDLYNHENLVKAIKQVDVVISTVGHAQIEDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           HAV+PAKSAF  KA+IRRA+EAEGIPYTY
Sbjct: 121 HAVDPAKSAFEGKARIRRAIEAEGIPYTY 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1708422|sp|P52578.1|IFRH_SOLTU RecName: Full=Isoflavone reductase homolog; AltName: Full=CP100 gi|1030068|emb|CAA63056.1| NAD(P)H oxidoreductase, isoflavone reductase homologue [Solanum tuberosum]

 Score =  249 bits (636), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 123/149 (82%), Positives = 134/149 (89%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA KSKILFIGGTGYIGKFIVEAS KAGH TFVLVRESTLS P+K++L+D FK  GV  V
Sbjct: 1   MAGKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFV 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ +HESLVKAIKQVDVVISTVGH LL DQVK+IAAIKEAGN+KRFFPSEFGNDVDRV
Sbjct: 61  HGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           HAVEPAK+AF TKA+IRR VEAEGIP+TY
Sbjct: 121 HAVEPAKAAFNTKAQIRRVVEAEGIPFTY 149

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637547|gb|ACU19100.1| unknown [Glycine max]

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 120/147 (81%), Positives = 135/147 (91%)

Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIG 62
           SKSKILFIGGTGYIGKFIVEAS KAGHPTF+LVRESTLS P+KS L+D+FK LGVNLV+G
Sbjct: 5   SKSKILFIGGTGYIGKFIVEASAKAGHPTFLLVRESTLSNPAKSPLIDNFKGLGVNLVLG 64

Query: 63  DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHA 122
           D+ +H+SLV AIKQVDVVISTVGH  L DQ KII+A KEAGN+K+F+PSEFGNDVDR HA
Sbjct: 65  DLYDHQSLVSAIKQVDVVISTVGHLQLADQDKIISATKEAGNVKKFYPSEFGNDVDRTHA 124

Query: 123 VEPAKSAFATKAKIRRAVEAEGIPYTY 149
           VEPAKSAFATKAK+RRA+EAEGIP+TY
Sbjct: 125 VEPAKSAFATKAKVRRAIEAEGIPFTY 151

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486357|gb|ABK95019.1| unknown [Populus trichocarpa]

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 134/145 (92%)

Query: 5   SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
           SKILFIGGTGYIGKFIVEAS KAGHPTFVLVRESTLS P+KS ++D+FK LGVN +IGD+
Sbjct: 3   SKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSNPAKSVVIDNFKNLGVNFLIGDL 62

Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVE 124
            +HESLVKAIKQVDVVISTVGH  L +Q +IIAAIKEAGN+KRFFPSEFGNDVDRV+AVE
Sbjct: 63  FDHESLVKAIKQVDVVISTVGHAQLVEQDRIIAAIKEAGNVKRFFPSEFGNDVDRVNAVE 122

Query: 125 PAKSAFATKAKIRRAVEAEGIPYTY 149
           PAKSAFATKA +RRA+EAEGIPYTY
Sbjct: 123 PAKSAFATKANVRRAIEAEGIPYTY 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122240|ref|XP_002330574.1| phenylcoumaran benzylic ether reductase 4 [Populus trichocarpa] gi|222872132|gb|EEF09263.1| phenylcoumaran benzylic ether reductase 4 [Populus trichocarpa]

 Score =  246 bits (629), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 119/146 (81%), Positives = 135/146 (92%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           +S+ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS+P+KS ++++FK LGVN ++GD
Sbjct: 5   RSRILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSSPAKSTVINNFKNLGVNFLLGD 64

Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           + +HESLVKAIKQVDVVIST+ H  L +Q KIIAAIKEAGNIKRFFPSEFGNDVDR HAV
Sbjct: 65  LSDHESLVKAIKQVDVVISTIAHDQLYNQDKIIAAIKEAGNIKRFFPSEFGNDVDRAHAV 124

Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
           EPAK+ FATKAKIRRA+EAEGIPYTY
Sbjct: 125 EPAKTGFATKAKIRRAIEAEGIPYTY 150

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6525021|gb|AAF15291.1|AF201458_1 isoflavone reductase-like NAD(P)H-dependent oxidoreductase [Medicago sativa]

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 121/149 (81%), Positives = 134/149 (89%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA KSKILFIGGTGYIGK IVEAS KAGHPTF LVRESTL+ P+K+ LL++FK LGVNLV
Sbjct: 1   MAEKSKILFIGGTGYIGKHIVEASAKAGHPTFALVRESTLADPAKANLLNNFKTLGVNLV 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ +H++LVK IKQVDVVISTVGH L+ DQVKIIAAIKEAGN+KRFFPS FGNDVDRV
Sbjct: 61  PGDLYDHQNLVKVIKQVDVVISTVGHALIEDQVKIIAAIKEAGNVKRFFPSAFGNDVDRV 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           HAV+PAKSAF  KAKIRRA+EAEGIPYTY
Sbjct: 121 HAVDPAKSAFYGKAKIRRAIEAEGIPYTY 149

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105373|ref|XP_002313788.1| phenylcoumaran benzylic ether reductase 3 [Populus trichocarpa] gi|222850196|gb|EEE87743.1| phenylcoumaran benzylic ether reductase 3 [Populus trichocarpa]

 Score =  243 bits (621), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 120/145 (82%), Positives = 133/145 (91%)

Query: 5   SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
           SKILFIGGTGYIGKFIVEAS KAGHPTFVLVRESTLS P+KS ++ +FK LGVN +IGD+
Sbjct: 3   SKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSNPAKSVVIYNFKNLGVNFLIGDL 62

Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVE 124
            +HESLVKAIKQVDVVISTVGH  L +Q +IIAAIKEAGN+KRFFPSEFGNDVDRV+AVE
Sbjct: 63  FDHESLVKAIKQVDVVISTVGHAQLVEQDRIIAAIKEAGNVKRFFPSEFGNDVDRVNAVE 122

Query: 125 PAKSAFATKAKIRRAVEAEGIPYTY 149
           PAKSAFATKA +RRA+EAEGIPYTY
Sbjct: 123 PAKSAFATKANVRRAIEAEGIPYTY 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.566	0.483	0.751	9.6e-57
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.566	0.480	0.726	1.1e-50
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.555	0.453	0.705	4.6e-50
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.787	0.650	0.538	3.7e-48
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.551	0.467	0.639	1.5e-42
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.551	0.457	0.490	1.3e-31
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.555	0.460	0.480	6.2e-30
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	0.536	0.460	0.417	6.6e-26
ASPGD|ASPL0000047359	312	AN8968 [Emericella nidulans (t	0.543	0.458	0.296	1.8e-13
UNIPROTKB|G4NCB9	322	MGG_00421 "Uncharacterized pro	0.539	0.440	0.296	4.1e-07

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 112/149 (75%), Positives = 131/149 (87%)

Query:     1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
             M SKSKILFIGGTGYIGK+IVEAS ++GHPT VLVR STL++PS+S  +++FK LGV  +
Sbjct:     1 MTSKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFL 60

Query:    61 IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
             +GD+ +H SLV +IKQ DVVISTVGH+LLG Q KII+AIKEAGN+KRFFPSEFGNDVDRV
Sbjct:    61 LGDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRV 120

Query:   121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
               VEPAKSA+ATKAKIRR +EAEGIPYTY
Sbjct:   121 FTVEPAKSAYATKAKIRRTIEAEGIPYTY 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 109/150 (72%), Positives = 123/150 (82%)

Query:     1 MAS-KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL 59
             MA+ KSKIL IGGTGYIGKF+VEAS KAGH TF LVRE+TLS P K + +  FK LGV +
Sbjct:     1 MATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTI 60

Query:    60 VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
             + GD+ +HESLVKAIKQVDVVISTVG   + DQ KII+AIKEAGN+KRF PSEFG DVDR
Sbjct:    61 LHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120

Query:   120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
               AVEPAKSAFA K +IRR +EAEGIPYTY
Sbjct:   121 TSAVEPAKSAFAGKIQIRRTIEAEGIPYTY 150

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 103/146 (70%), Positives = 122/146 (83%)

Query:     4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
             KSKIL IGGTGY+G+FIVE S KAG+PTF LVRE++LS P KS+ +  FK LGV ++ GD
Sbjct:     5 KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHGD 64

Query:    64 VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
             + +HESLVKAIKQVDVVIST+GH  + DQ KII+AIKEAGN+KRF P+EFG DV+R  AV
Sbjct:    65 LNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVERTSAV 124

Query:   124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
             EPAKS FA K +IRRA+EAEGIPYTY
Sbjct:   125 EPAKSLFAGKVQIRRAIEAEGIPYTY 150

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 118/219 (53%), Positives = 148/219 (67%)

Query:     1 MAS-KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL 59
             MAS KSKIL IGGTG+IGK I+EASVKAGH T  LVRE++LS P+K + + +FK  GV L
Sbjct:     1 MASEKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTL 60

Query:    60 VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
             + GD+ +HESLVKAIKQ DVVISTVG   + DQ KII+AIKEAGN+KRF PSEFG DVD+
Sbjct:    61 LHGDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120

Query:   120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH--GSLVKAIKQVDVVISTVGHTLL 177
               AVEPAKSAF  K + RR +EAEGIPYTY  V N+  G  +  + Q++  +++      
Sbjct:   121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYL-VTNYFAGYYLPTLVQLEPGLTSPPR--- 176

Query:   178 ADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKS 216
              D+VKI       GNVK     E       + AV+  ++
Sbjct:   177 -DKVKIFGD----GNVKAVINKEEDIAAYTIKAVDDPRT 210

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 94/147 (63%), Positives = 112/147 (76%)

Query:     5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
             SKIL IG TG IGK +VE S K+GH TF LVRE++LS P K+QL++ FK LGV ++ G +
Sbjct:     3 SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62

Query:    65 LNHESLVKAIKQVDVVISTVGH--TLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHA 122
              + ESLVKAIKQVDVVIS VG   T + +Q  II AIKE+GN+KRF PSEFGNDVDR  A
Sbjct:    63 SDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGNDVDRTVA 122

Query:   123 VEPAKSAFATKAKIRRAVEAEGIPYTY 149
             +EP  S F TKA+IRRA+EA  IPYTY
Sbjct:   123 IEPTLSEFITKAQIRRAIEAAKIPYTY 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 75/153 (49%), Positives = 99/153 (64%)

Query:     4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
             K+++L +G TGYIGK IV A +  GH T+VL R        K QL   FKKLG  +V G 
Sbjct:     9 KTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEGS 68

Query:    64 VLNHESLVKAIKQVDVVISTVG------HTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDV 117
               +H+SLV A+K VDVV+S +       H +L  Q+K++ AIKEAGN+KRF PSEFG D 
Sbjct:    69 FSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILV-QLKLVEAIKEAGNVKRFLPSEFGMDP 127

Query:   118 DRV-HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
              R+ HA+ P +  F  K ++R+A+EA GIPYTY
Sbjct:   128 PRMGHALPPGRETFDQKMEVRQAIEAAGIPYTY 160

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 73/152 (48%), Positives = 99/152 (65%)

Query:     4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
             K+++L +GGTG +G+ IV A +  GH T+VL R        K QLL  FK+LG +LV G 
Sbjct:     9 KTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEGS 68

Query:    64 VLNHESLVKAIKQVDVVISTVG--HTLLGD---QVKIIAAIKEAGNIKRFFPSEFGNDVD 118
               +H+SLV A+KQVDVV+S +   H    +   Q+K++AAIKEAGN+KRF PSEFG D  
Sbjct:    69 FSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDPS 128

Query:   119 RV-HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
             R+ HA+ P    F  K +IR A++A GI +TY
Sbjct:   129 RMGHAMPPGSETFDQKMEIRNAIKAAGISHTY 160

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 61/146 (41%), Positives = 94/146 (64%)

Query:     4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
             KS++L IG TG +G ++   S+++GHPTF L+R +TLS   KS L D     GV L+ G 
Sbjct:     7 KSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSDKLKS-LSD----AGVTLLKGS 61

Query:    64 VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
             + +  SL +A+ +VDVVIS +    + DQ  ++  IK+AG+IKRF P+E+G + D+    
Sbjct:    62 LEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPDKTQVS 121

Query:   124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
             +     ++ K++IR  +E+EGIPYTY
Sbjct:   122 DLDHDFYSKKSEIRHMIESEGIPYTY 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

ASPGD|ASPL0000047359 AN8968 [Emericella nidulans (taxid:162425)]

 Score = 187 (70.9 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 45/152 (29%), Positives = 81/152 (53%)

Query:     3 SKSKILFIGGTGYIGKFIVEASVKAGHPTF----VLVRESTLSAPSKSQLLDHFKKLGVN 58
             +KS +L  G TG IG +I  A++      F    +   +STL+  +K   ++  ++  V+
Sbjct:     2 TKSNLLIFGATGAIGSYIT-AAITDARDEFGRIGIFTSQSTLTKKTKE--INALREKAVD 58

Query:    59 LVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVD 118
             +++GDV + + ++KA    D V+S +G  ++  QV ++    E+  IKRF PSE+G D++
Sbjct:    59 ILVGDVTSKDEVLKAFDGFDTVVSALGRGVIAQQVHLVQWADESPQIKRFLPSEYGTDIE 118

Query:   119 RVHAVEPAKSAFATKAKIRRAV-EAEGIPYTY 149
                A    K     K K+R A+ E + + Y +
Sbjct:   119 YSLASANEKP-HQQKLKVRAAIRETKNLEYAF 149

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|G4NCB9 MGG_00421 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
 Identities = 48/162 (29%), Positives = 78/162 (48%)

Query:     3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIG 62
             S SK++ +G  GY+G ++  A V AG    VL R    S P      DH  K      I 
Sbjct:     6 SISKVVLVG-KGYVGGYVYAALVDAGFQVTVLSR----SNPKG----DHHVK------IV 50

Query:    63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFG--NDVDRV 120
             D  + ES+ +AI+  D V+ T+ HT    Q ++I A  EAG +K F PS+F   +    V
Sbjct:    51 DYSSTESIRRAIQDHDAVVCTISHTAWEHQYRLIDAAVEAGTVKHFIPSDFTALSCNAAV 110

Query:   121 HAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAI 162
             H +   + A A +  + +  +  G+ +   +V+  G ++  +
Sbjct:   111 HHLPYYREAAAMQNYLAQKADGAGMRW---NVIQSGPIIGCV 149

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.45	LOW CONFIDENCE prediction!
3rd Layer	1.3.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PCBER4 phenylcoumaran benzylic ether reductase 4 (303 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	263
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-55
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-46
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-38
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	4e-29
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-19
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-15
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-12
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-11
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-11
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	4e-10
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	6e-09
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-08
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	2e-08
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-07
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-06
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-06
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	6e-06
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	6e-06
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	1e-05
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	4e-05
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	7e-05
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	8e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-05
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	1e-04
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	1e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-04
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	3e-04
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	3e-04
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	3e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-04
pfam03435	380	pfam03435, Saccharop_dh, Saccharopine dehydrogenas	6e-04
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	6e-04
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	7e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.001
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	0.002
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.004

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score =  177 bits (451), Expect = 2e-55
 Identities = 74/146 (50%), Positives = 91/146 (62%), Gaps = 10/146 (6%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           IL  G TGY G  +V AS+KAGHP   LVR+       KS+L    K  GV LV GD+ +
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDP------KSELAKSLKAAGVELVEGDLDD 54

Query: 67  HESLVKAIKQVDVVISTVG---HTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           HESLV+A+K VDVV S  G      + D  K+  A KEAG +K F PSEFGNDVDR + V
Sbjct: 55  HESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFIPSEFGNDVDRSNGV 113

Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
           EPA   F +KA++ R + A GIPYT+
Sbjct: 114 EPAVPHFDSKAEVERYIRALGIPYTF 139

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score =  155 bits (393), Expect = 1e-46
 Identities = 68/135 (50%), Positives = 89/135 (65%), Gaps = 4/135 (2%)

Query: 132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVG---HTLLADQVKIIAAIK 188
            K+++ ++++A G+    GD+ +H SLV+A+K VDVV S  G      + D  K+  A K
Sbjct: 32  PKSELAKSLKAAGVELVEGDLDDHESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAK 91

Query: 189 EAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFL 248
           EAG VK F PSEFGNDVDR N VEPA   F +KA++ R + A GIPYT+V + FF G FL
Sbjct: 92  EAG-VKHFIPSEFGNDVDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAGFFMGNFL 150

Query: 249 PNLSQPGATAPPRDK 263
            NL+ PG  APPRDK
Sbjct: 151 SNLAPPGDLAPPRDK 165

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score =  135 bits (342), Expect = 2e-38
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 12/147 (8%)

Query: 6   KILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
           KI   G TG +G  IV A + + G    VL R S+ S+         F+  GV +V  D 
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSN-------EFQPSGVKVVPVDY 53

Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVE 124
            +HESLV A+K VD VIS +G   +GDQ+K+I A   AG +KRF PSEFG D DR+ A+ 
Sbjct: 54  ASHESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDRIGALP 112

Query: 125 PAKSAFATKAKIRRAVEA--EGIPYTY 149
                F  K  +RR + A   G+P+TY
Sbjct: 113 LL-DLFDEKRDVRRYLRAKNAGLPWTY 138

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score =  110 bits (278), Expect = 4e-29
 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 208
             D  +H SLV A+K VD VIS +G   + DQ+K+I A   AG VKRF PSEFG D DR+
Sbjct: 50  PVDYASHESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDRI 108

Query: 209 NAVEPAKSAFVTKAKIRRAVEA--EGIPYTYVASNFFAGYFLPNLSQPGATAPPRDK 263
            A+      F  K  +RR + A   G+P+TYV++  F  Y L  L   G        
Sbjct: 109 GALPLL-DLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPL--FGVVDLANRT 162

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 83.2 bits (206), Expect = 1e-19
 Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 30/177 (16%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           IL +G TG+IG+ +    ++ GH   +LVR         ++ L    +  V +V GD+ +
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVR--------NTKRLSKEDQEPVAVVEGDLRD 52

Query: 67  HESLVKAIKQVDVVISTVGHTLLGD---------QVKIIAAIKEAGNIKRFFPSEFGNDV 117
            +SL  A++ VDVVI   G                  ++ A KEAG +K F         
Sbjct: 53  LDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFISSLGAY 111

Query: 118 DRVH---AVEPAKSAFATKAKIRRAVEAEGIPYT-------YGDVLNHGSLVKAIKQ 164
             +H      P+    A KAK    +    +PYT       YGD+     +  A+  
Sbjct: 112 GDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYGDLARA--IANAVVT 166

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           K+L +G TG +G+ +V   +  G+    LVR+     PS+++ L+     G  +V+GD+ 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD-----PSQAEKLEA---AGAEVVVGDLT 52

Query: 66  NHESLVKAIKQVDVVISTVGHTLLGD----------QVKIIAAIKEAGNIKRF-FPSEFG 114
           + ESL  A++ +D VIS  G    G            + +I A K+AG +KRF   S  G
Sbjct: 53  DAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSSIG 111

Query: 115 NDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
            D    H +E        K K    + A G+ YT
Sbjct: 112 AD-KPSHPLEALGPYLDAKRKAEDYLRASGLDYT 144

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 43/147 (29%), Positives = 59/147 (40%), Gaps = 19/147 (12%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           IL  G TG +G  +VE  +        LVR      P K++    F   GV +  GD  +
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVR-----NPEKAKA---FAADGVEVRQGDYDD 52

Query: 67  HESLVKAIKQVDVV--ISTVGHTLLGDQVK-IIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
            E+L +A + VD +  IS         Q K  I A K+AG +K               A 
Sbjct: 53  PETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAG-VKHIVYLSASG------AD 105

Query: 124 EPAKSAFATK-AKIRRAVEAEGIPYTY 149
           E +    A       + +EA GIPYT 
Sbjct: 106 EDSPFLLARDHGATEKYLEASGIPYTI 132

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 20/151 (13%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           I  IG TG  G+ +V+  +  GH    L R      PSK+         GV  V  D+ +
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSR-----NPSKAP------APGVTPVQKDLFD 49

Query: 67  HESLVKAIKQVDVVISTVG-HTLLGDQVK-IIAAIKEAGNIKRF-FPSEFGNDVDRVHAV 123
              L +A+  VD V+   G      D VK ++ A   AG ++R    S  G   D     
Sbjct: 50  LADLAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAG-VRRIVVVSAAGLYRDEPGTF 108

Query: 124 EP-----AKSAFATKAKIRRAVEAEGIPYTY 149
                         KA     + A G+ +T 
Sbjct: 109 RLDDAPLFPPYARAKAAAEELLRASGLDWTI 139

Length = 182

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 28/162 (17%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           KI  IG TG  G  IV  ++  GH    LVR         ++L    +KL   +V GDVL
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVR-------DPAKLPAEHEKL--KVVQGDVL 51

Query: 66  NHESLVKAIKQVDVVISTVG-------HTLLGDQVK-IIAAIKEAGNIKRFF-------- 109
           + E + +A++  D VIS +G        TL  +  + I++A+K AG +KR          
Sbjct: 52  DLEDVKEALEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAG-VKRLIVVGGAGSL 110

Query: 110 --PSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
               +    +D +      +      A++ + +   G+ +T 
Sbjct: 111 DDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTA 152

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 2   ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST--LSAPSKSQLLDHFKKLGVNL 59
                +L +G TGYIGKF+V   V+ G+    + RE +       K          G  +
Sbjct: 58  PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP--GAEV 115

Query: 60  VIGDVLNHESLVKAIKQ----VDVVIS 82
           V GDV + +SL K +      VDVV+S
Sbjct: 116 VFGDVTDADSLRKVLFSEGDPVDVVVS 142

Length = 390

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 8/81 (9%)

Query: 7  ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
          IL  G TG++G  +V A +  G+    LVR       S + LLD    L V +V GD+ +
Sbjct: 1  ILVTGATGFLGSNLVRALLAQGYRVRALVRSG-----SDAVLLDG---LPVEVVEGDLTD 52

Query: 67 HESLVKAIKQVDVVISTVGHT 87
            SL  A+K  D V      T
Sbjct: 53 AASLAAAMKGCDRVFHLAAFT 73

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 150 GDVLNHGSLVKAIKQVDVVISTVG------HTLLAD---QVKIIAAIKEAGNVKRFFPSE 200
           GD+ +  SL  A++ VDVVI   G           D      ++ A KEAG VK F    
Sbjct: 48  GDLRDLDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFIS 106

Query: 201 FGN---DVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAG 245
                 D+       P+      KAK    +    +PYT V      G
Sbjct: 107 SLGAYGDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 27/156 (17%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           K+L +G  G I +   EA+      + V   E TL   +  +LL H K   V +V GD L
Sbjct: 2   KVLILGANGEIAR---EATTMLLENSNV---ELTLFLRNAHRLL-HLKSARVTVVEGDAL 54

Query: 66  NHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKR-FFPSEFG--NDVDRVHA 122
           N + L  A++  DVV + +G T L  Q + +    +A  +KR  + +  G  ++V     
Sbjct: 55  NSDDLKAAMRGQDVVYANLGGTDLDQQAENVVQAMKAVGVKRLIWTTSLGIYDEV----- 109

Query: 123 VEPAKSAFATKAKI-------RRA---VEAEGIPYT 148
             P K     K  I       R++   +E   + YT
Sbjct: 110 --PGKFGEWNKEFIGNYLAPYRKSAAVIENSDLDYT 143

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 15/105 (14%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           KIL IGGT +IGK +VE  + AGH   V  R  T     +          GV  ++GD  
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPE----------GVEHIVGDRN 51

Query: 66  NHESLVKAIK--QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRF 108
           + ++L + +     DVV+ T+ +T    QV+      + G +K++
Sbjct: 52  DRDALEELLGGEDFDVVVDTIAYT--PRQVERALDAFK-GRVKQY 93

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 137 RRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVV--ISTVGHTLLADQVK-IIAAIKEAGNV 193
            +A  A+G+    GD  +  +L +A + VD +  IS         Q K  I A K+AG V
Sbjct: 35  AKAFAADGVEVRQGDYDDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAG-V 93

Query: 194 KRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNL 251
           K           D  +    A+          + +EA GIPYT +   +F    L  L
Sbjct: 94  KHIVYLSASGA-DEDSPFLLARD----HGATEKYLEASGIPYTILRPGWFMDNLLEFL 146

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLG-VNLVIGDV 64
           +   G TG+IG+++V    K G    V  R    +             LG V  V  D+
Sbjct: 2  VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGD-----LGQVLFVEFDL 56

Query: 65 LNHESLVKAIKQVDVVISTVG 85
           + ES+ KA++  DVVI+ VG
Sbjct: 57 RDDESIRKALEGSDVVINLVG 77

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 10/80 (12%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          KI  IG +G  G  I++ ++K GH    +VR       SK          GV ++  D+ 
Sbjct: 2  KIAIIGASGKAGSRILKEALKRGHEVTAIVRN-----ASKLAARQ-----GVTILQKDIF 51

Query: 66 NHESLVKAIKQVDVVISTVG 85
          +  SL   +   D VIS  G
Sbjct: 52 DLTSLASDLAGHDAVISAFG 71

Length = 211

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.1 bits (109), Expect = 6e-06
 Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 23/152 (15%)

Query: 5   SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
            KIL  G TG++G  +V   +  GH     VR                   GV +V+GD+
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPE---------AAAALAGGVEVVLGDL 51

Query: 65  LNHESLVKAIKQVDVVISTVG------HTLLGDQVKIIAAIKEAGNIKRFF--PSEFGND 116
            + +SLV   K VD V+   G               ++ A + AG   +     S  G D
Sbjct: 52  RDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD 111

Query: 117 VDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
                A          KA +  A+ + GIPYT
Sbjct: 112 AASPSA------LARAKAAVEAALRSSGIPYT 137

Length = 275

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 24/152 (15%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           +L IG TG +G+ IV  ++  G+    LVR        K+  L   K+ G  LV GD+  
Sbjct: 3   LLVIGATGTLGRQIVRQALDEGYQVRCLVRNL-----RKASFL---KEWGAELVYGDLSL 54

Query: 67  HESLVKAIKQVDVVI--STVGHTLLGDQVKI-----IAAIKEA--GNIKRF-FPSEFGND 116
            E+L  + K V  +I  ST   + L +  +I     +A I+ A    IKRF F S    +
Sbjct: 55  PETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL--N 112

Query: 117 VDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
            ++   +   K     K+ I + ++  GIPYT
Sbjct: 113 AEQYPYIPLMK----LKSDIEQKLKKSGIPYT 140

Length = 317

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          K+L  GG GYIG   V   ++AG+   VL   S        + L   +K+ +    GD+ 
Sbjct: 1  KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSN----GHREALPRIEKIRIEFYEGDIR 56

Query: 66 NHESLVKAIKQ--VDVVI 81
          +  +L K   +  +D VI
Sbjct: 57 DRAALDKVFAEHKIDAVI 74

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 8/78 (10%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          K+   G TG+IG  +V   V AGH    L R    +A  ++         G  +  GD+ 
Sbjct: 2  KVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAA--------GAQVHRGDLE 53

Query: 66 NHESLVKAIKQVDVVIST 83
          + + L KA  + D VI  
Sbjct: 54 DLDILRKAAAEADAVIHL 71

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 42.9 bits (102), Expect = 8e-05
 Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 24/123 (19%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           K+L  GG GYIG   V   +K GH   VL   S               KL      GD+L
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK-------IALLKLQFKFYEGDLL 54

Query: 66  NHESLVKAIK--QVDVVISTVGHTLLGDQVK---------------IIAAIKEAGNIKRF 108
           +   L    +  ++D V+       +G+ V+               +I A+ + G  K  
Sbjct: 55  DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114

Query: 109 FPS 111
           F S
Sbjct: 115 FSS 117

Length = 329

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 24/125 (19%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           ++L +GG G+IG  +V+A ++ G    V           +S         GV+ + GD  
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVF---------DRSIPPYELPLGGVDYIKGDYE 51

Query: 66  NHESLVKAIKQVDVVISTVGHTLLGDQ---------------VKIIAAIKEAGNIKRFFP 110
           N   L  A+  +D VI     T                    V+++ A   AG  K  F 
Sbjct: 52  NRADLESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFA 111

Query: 111 SEFGN 115
           S  G 
Sbjct: 112 SSGGT 116

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 25/162 (15%)

Query: 93  VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV 152
           V I+ A    G I R   +    +   V         F   A     +++  +    GD 
Sbjct: 3   VLILGA---NGEIAREATTMLLEN-SNVELT-----LFLRNAHRLLHLKSARVTVVEGDA 53

Query: 153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKR-FFPSEFGNDVDRVNAV 211
           LN   L  A++  DVV + +G T L  Q + +    +A  VKR  + +  G     +   
Sbjct: 54  LNSDDLKAAMRGQDVVYANLGGTDLDQQAENVVQAMKAVGVKRLIWTTSLG-----IYDE 108

Query: 212 EPAKSAFVTKAKI-------RRA---VEAEGIPYTYVASNFF 243
            P K     K  I       R++   +E   + YT +   + 
Sbjct: 109 VPGKFGEWNKEFIGNYLAPYRKSAAVIENSDLDYTLLRPAWL 150

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          KIL  GG GYIG   V   +++GH   +L     LS  S+  L    +   V  V GD+ 
Sbjct: 1  KILVTGGAGYIGSHTVRQLLESGHEVVIL---DNLSNGSREALPRGERITPVTFVEGDLR 57

Query: 66 NHESL--VKAIKQVDVVISTVGHTLLGDQVKI 95
          + E L  +    ++D VI   G   +G+ V+ 
Sbjct: 58 DRELLDRLFEEHKIDAVIHFAGLIAVGESVQK 89

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 26/123 (21%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           +IL  GG G+IG  +VE  + AGH    L R      P  S         GV  V+ D+ 
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS---------GVEFVVLDLT 52

Query: 66  NHESLVKAIKQV-DVVI-----STVGHTLLGDQVK-----------IIAAIKEAGNIKRF 108
           + + + +  K V D VI     S+V  +   D  +           ++ A + AG  +  
Sbjct: 53  DRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 109 FPS 111
           F S
Sbjct: 113 FAS 115

Length = 314

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          K+L  G TG++G  +V   ++ G    VLVR       S  + L+    L V +V GD+ 
Sbjct: 2  KVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-----PTSDRRNLE---GLDVEIVEGDLR 53

Query: 66 NHESLVKAIKQVDVVISTVGHTLL 89
          +  SL KA+     +        L
Sbjct: 54 DPASLRKAVAGCRALFHVAADYRL 77

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 7  ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV-- 64
          +   GGTG++G+ +V+  ++ G    VLVR  +L    +       +   V ++ GD+  
Sbjct: 1  VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 65 ----LNHESLVKAIKQVDVVI 81
              L+  +  +   +VD VI
Sbjct: 61 PNLGLSAAASRELAGKVDHVI 81

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 11/82 (13%)

Query: 8  LFIGGTGYIGKFIVEASVKAGHPTFVLV---RESTLSAPSKSQLLDHFKKLGV-NLVIGD 63
          L  GG G++G+ IV   ++ G    V V   R S        +LL+ F KL V   + GD
Sbjct: 1  LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFS-------PELLEDFSKLQVITYIEGD 53

Query: 64 VLNHESLVKAIKQVDVVISTVG 85
          V + + L +A++  DVVI T  
Sbjct: 54 VTDKQDLRRALQGSDVVIHTAA 75

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 8/82 (9%)

Query: 7  ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
          +L  G TGY+G  +V   ++ GH    LVR       S  +L D      V +V GD+ +
Sbjct: 1  VLVTGATGYVGGRLVPRLLQEGHQVRALVR-------SPEKLADRPWSERVTVVRGDLED 53

Query: 67 HESLVKAIKQVDVVISTVGHTL 88
           ESL  A++ +D     V H++
Sbjct: 54 PESLRAALEGIDTAYYLV-HSM 74

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 7  ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
          IL  GGTG+IG  +V   ++ G+   VL R     +              +    GD+ +
Sbjct: 1  ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES---------LNTGRIRFHEGDLTD 51

Query: 67 HESLVKAIK--QVDVVI 81
           ++L + +   Q D VI
Sbjct: 52 PDALERLLAEVQPDAVI 68

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           +L IG  G +G+ +     + G     +   S   A     L      L    +  D  N
Sbjct: 1   VLIIGA-GGVGQGVAPLLARHGDLEITVADRSLEKAQ---ALAAPKLGLRFIAIAVDADN 56

Query: 67  HESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAG 103
           +E+LV  +K+ D+VI+     L      ++ A  E G
Sbjct: 57  YEALVALLKEGDLVINLAPPFLSLT---VLKACIETG 90

This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 15/118 (12%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
            +L  G TG+I   IVE  +KAG+     VR  + SA  K+ L        +  VI D L
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 66  NH-ESLVKAIKQVDVVIST-----VGHTLLGDQVKIIA---------AIKEAGNIKRF 108
               +  +A+K VD VI              D V   A         A K AG++KR 
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRV 118

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 21/125 (16%)

Query: 129 AFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVG-------HTLLAD-- 179
           A          +EA G     GD+ +  SL  A++ +D VIS  G        T   D  
Sbjct: 28  ALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYD 87

Query: 180 -QVKIIAAIKEAGNVKRF-FPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE----GI 233
             + +I A K+AG VKRF   S  G D            A       +R  E      G+
Sbjct: 88  GNINLIDAAKKAG-VKRFVLVSSIGAD-----KPSHPLEALGPYLDAKRKAEDYLRASGL 141

Query: 234 PYTYV 238
            YT V
Sbjct: 142 DYTIV 146

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 25/100 (25%), Positives = 35/100 (35%), Gaps = 12/100 (12%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
           IL  G TG IG  +    ++AG P   LVR          +        G  +V+GD+ +
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVR--------SDERAAALAARGAEVVVGDLDD 52

Query: 67  HESLVKAIKQVDVVISTV----GHTLLGDQVKIIAAIKEA 102
              L  A+  VD V                V+   A   A
Sbjct: 53  PAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASA 92

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 3/76 (3%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           +L  G  G+IG  + E  ++ GH    L      ++ +   LLD+      + + GDV 
Sbjct: 1  NVLVTGADGFIGSHLTERLLREGHEVRALDI---YNSFNSWGLLDNAVHDRFHFISGDVR 57

Query: 66 NHESLVKAIKQVDVVI 81
          +   +   +K+ DVV 
Sbjct: 58 DASEVEYLVKKCDVVF 73

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 9/108 (8%)

Query: 139 AVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVG-HTLLADQVK-IIAAIKEAGNVKRF 196
              A G+     D+ +   L +A+  VD V+   G     +D VK ++ A   AG V+R 
Sbjct: 34  KAPAPGVTPVQKDLFDLADLAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAG-VRRI 92

Query: 197 -FPSEFGNDVDRVNAVEP-----AKSAFVTKAKIRRAVEAEGIPYTYV 238
              S  G   D                   KA     + A G+ +T V
Sbjct: 93  VVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIV 140

Length = 182

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.9
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.9
PRK08339	263	short chain dehydrogenase; Provisional	99.86
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.86
CHL00194	317	ycf39 Ycf39; Provisional	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.84
KOG0725	270	consensus Reductases with broad range of substrate	99.84
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.83
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
PRK07063	260	short chain dehydrogenase; Provisional	99.82
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.81
PRK07062	265	short chain dehydrogenase; Provisional	99.81
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.8
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.8
PRK09186	256	flagellin modification protein A; Provisional	99.8
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.8
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.8
PRK05867	253	short chain dehydrogenase; Provisional	99.8
PLN02214	342	cinnamoyl-CoA reductase	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.79
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.79
PRK05993	277	short chain dehydrogenase; Provisional	99.79
PRK06114	254	short chain dehydrogenase; Provisional	99.79
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.79
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PLN00198	338	anthocyanidin reductase; Provisional	99.78
PLN02572	442	UDP-sulfoquinovose synthase	99.78
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.78
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.78
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.78
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.78
PRK06125	259	short chain dehydrogenase; Provisional	99.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.78
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.78
PRK08265	261	short chain dehydrogenase; Provisional	99.78
PRK06180	277	short chain dehydrogenase; Provisional	99.78
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.77
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PRK06398	258	aldose dehydrogenase; Validated	99.77
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.77
PRK08643	256	acetoin reductase; Validated	99.77
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.76
PLN03209	576	translocon at the inner envelope of chloroplast su	99.76
PRK06182	273	short chain dehydrogenase; Validated	99.76
PRK08589	272	short chain dehydrogenase; Validated	99.76
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PLN02427	386	UDP-apiose/xylose synthase	99.76
PRK06523	260	short chain dehydrogenase; Provisional	99.76
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.76
PRK12747	252	short chain dehydrogenase; Provisional	99.76
PLN02653	340	GDP-mannose 4,6-dehydratase	99.76
PLN02650	351	dihydroflavonol-4-reductase	99.76
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.75
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.75
PRK06179	270	short chain dehydrogenase; Provisional	99.75
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.75
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.75
PRK07067	257	sorbitol dehydrogenase; Provisional	99.75
PLN02240	352	UDP-glucose 4-epimerase	99.75
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.75
PRK08226	263	short chain dehydrogenase; Provisional	99.75
PRK07478	254	short chain dehydrogenase; Provisional	99.75
PRK05866	293	short chain dehydrogenase; Provisional	99.75
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.75
PRK06196	315	oxidoreductase; Provisional	99.75
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.74
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.74
PLN02686	367	cinnamoyl-CoA reductase	99.74
PRK08303	305	short chain dehydrogenase; Provisional	99.74
PRK07985	294	oxidoreductase; Provisional	99.74
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.74
PRK06172	253	short chain dehydrogenase; Provisional	99.74
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.74
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.73
PRK07806	248	short chain dehydrogenase; Provisional	99.73
PRK07791	286	short chain dehydrogenase; Provisional	99.73
PRK08263	275	short chain dehydrogenase; Provisional	99.73
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK06940	275	short chain dehydrogenase; Provisional	99.73
PRK10538	248	malonic semialdehyde reductase; Provisional	99.73
PRK06482	276	short chain dehydrogenase; Provisional	99.73
PRK08862	227	short chain dehydrogenase; Provisional	99.73
PLN02253	280	xanthoxin dehydrogenase	99.73
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.73
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.73
PRK07856	252	short chain dehydrogenase; Provisional	99.72
PRK06483	236	dihydromonapterin reductase; Provisional	99.72
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.72
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.72
PRK07825	273	short chain dehydrogenase; Provisional	99.72
PRK06841	255	short chain dehydrogenase; Provisional	99.72
PRK06197	306	short chain dehydrogenase; Provisional	99.72
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.72
PRK07890	258	short chain dehydrogenase; Provisional	99.71
PRK05854	313	short chain dehydrogenase; Provisional	99.71
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.71
PRK05876	275	short chain dehydrogenase; Provisional	99.71
PRK06128	300	oxidoreductase; Provisional	99.71
PRK05717	255	oxidoreductase; Validated	99.71
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.71
PRK09291	257	short chain dehydrogenase; Provisional	99.7
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.7
PRK06139	330	short chain dehydrogenase; Provisional	99.7
PRK06484	520	short chain dehydrogenase; Validated	99.7
PRK08177	225	short chain dehydrogenase; Provisional	99.7
PRK08267	260	short chain dehydrogenase; Provisional	99.7
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.7
PLN02260	668	probable rhamnose biosynthetic enzyme	99.7
PRK07109	334	short chain dehydrogenase; Provisional	99.7
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.7
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.7
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PLN02583	297	cinnamoyl-CoA reductase	99.69
PRK07024	257	short chain dehydrogenase; Provisional	99.69
PRK06500	249	short chain dehydrogenase; Provisional	99.69
PRK07831	262	short chain dehydrogenase; Provisional	99.69
PRK07577	234	short chain dehydrogenase; Provisional	99.69
PRK06138	252	short chain dehydrogenase; Provisional	99.69
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.69
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.69
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.69
PRK05599	246	hypothetical protein; Provisional	99.69
PRK08278	273	short chain dehydrogenase; Provisional	99.69
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.69
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.69
PRK09242	257	tropinone reductase; Provisional	99.69
PRK06914	280	short chain dehydrogenase; Provisional	99.69
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK07035	252	short chain dehydrogenase; Provisional	99.68
PLN02206	442	UDP-glucuronate decarboxylase	99.68
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.68
PRK06194	287	hypothetical protein; Provisional	99.68
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.68
PRK12744	257	short chain dehydrogenase; Provisional	99.68
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.68
PRK07814	263	short chain dehydrogenase; Provisional	99.68
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.68
PRK07774	250	short chain dehydrogenase; Provisional	99.68
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.68
PRK05872	296	short chain dehydrogenase; Provisional	99.68
PRK05884	223	short chain dehydrogenase; Provisional	99.68
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK07102	243	short chain dehydrogenase; Provisional	99.68
PRK08251	248	short chain dehydrogenase; Provisional	99.67
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.67
PRK07904	253	short chain dehydrogenase; Provisional	99.67
PRK12743	256	oxidoreductase; Provisional	99.67
PRK08628	258	short chain dehydrogenase; Provisional	99.67
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.67
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.67
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.67
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.67
PRK05875	276	short chain dehydrogenase; Provisional	99.67
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.67
PRK07677	252	short chain dehydrogenase; Provisional	99.67
PRK05693	274	short chain dehydrogenase; Provisional	99.67
PRK07069	251	short chain dehydrogenase; Validated	99.67
PLN02780	320	ketoreductase/ oxidoreductase	99.67
PRK12742	237	oxidoreductase; Provisional	99.66
PRK12937	245	short chain dehydrogenase; Provisional	99.66
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.66
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.66
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.66
PRK06701	290	short chain dehydrogenase; Provisional	99.66
PRK06101	240	short chain dehydrogenase; Provisional	99.66
PRK07454	241	short chain dehydrogenase; Provisional	99.66
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.66
PRK07023	243	short chain dehydrogenase; Provisional	99.66
PRK05650	270	short chain dehydrogenase; Provisional	99.66
PRK07074	257	short chain dehydrogenase; Provisional	99.66
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.65
PRK09135	249	pteridine reductase; Provisional	99.65
PRK12829	264	short chain dehydrogenase; Provisional	99.65
PRK07201	657	short chain dehydrogenase; Provisional	99.65
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.65
PRK05855	582	short chain dehydrogenase; Validated	99.65
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.65
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.65
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK06057	255	short chain dehydrogenase; Provisional	99.65
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.64
PRK12827	249	short chain dehydrogenase; Provisional	99.64
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.64
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.64
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.64
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK09072	263	short chain dehydrogenase; Provisional	99.64
PRK12746	254	short chain dehydrogenase; Provisional	99.64
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.64
PRK06484	520	short chain dehydrogenase; Validated	99.64
PRK08219	227	short chain dehydrogenase; Provisional	99.64
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK07060	245	short chain dehydrogenase; Provisional	99.63
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.63
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.63
PRK09134	258	short chain dehydrogenase; Provisional	99.63
PRK12828	239	short chain dehydrogenase; Provisional	99.63
PRK08264	238	short chain dehydrogenase; Validated	99.63
PRK05865	854	hypothetical protein; Provisional	99.63
PRK07201	657	short chain dehydrogenase; Provisional	99.63
PRK06949	258	short chain dehydrogenase; Provisional	99.63
PLN00016	378	RNA-binding protein; Provisional	99.62
PRK07832	272	short chain dehydrogenase; Provisional	99.62
PRK12939	250	short chain dehydrogenase; Provisional	99.62
PRK07775	274	short chain dehydrogenase; Provisional	99.62
PRK07576	264	short chain dehydrogenase; Provisional	99.62
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.62
PRK06924	251	short chain dehydrogenase; Provisional	99.61
PRK08703	239	short chain dehydrogenase; Provisional	99.61
PRK12367	245	short chain dehydrogenase; Provisional	99.61
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.61
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.61
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.61
PRK06123	248	short chain dehydrogenase; Provisional	99.61
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.6
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.6
PRK07326	237	short chain dehydrogenase; Provisional	99.6
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.6
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.6
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.59
PRK06198	260	short chain dehydrogenase; Provisional	99.59
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
COG1028	251	FabG Dehydrogenases with different specificities (	99.59
PLN02996	491	fatty acyl-CoA reductase	99.59
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.58
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.58
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.58
PRK08017	256	oxidoreductase; Provisional	99.58
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.57
PRK07041	230	short chain dehydrogenase; Provisional	99.57
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.57
PRK07578	199	short chain dehydrogenase; Provisional	99.57
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.56
PRK08324	681	short chain dehydrogenase; Validated	99.56
PLN02778	298	3,5-epimerase/4-reductase	99.56
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.56
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.56
PRK06181	263	short chain dehydrogenase; Provisional	99.56
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.55
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.54
PRK12320	699	hypothetical protein; Provisional	99.54
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.54
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK06953	222	short chain dehydrogenase; Provisional	99.52
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.52
PLN00015	308	protochlorophyllide reductase	99.5
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.5
KOG1208	314	consensus Dehydrogenases with different specificit	99.49
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.48
COG2910	211	Putative NADH-flavin reductase [General function p	99.48
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.48
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.48
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.47
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.43
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.41
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.41
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.4
PLN02503	605	fatty acyl-CoA reductase 2	99.4
PLN02260	668	probable rhamnose biosynthetic enzyme	99.39
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.37
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.36
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.36
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.35
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.34
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.32
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.32
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.29
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.26
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.23
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.22
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.22
PRK06720	169	hypothetical protein; Provisional	99.18
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.11
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.1
PRK08309	177	short chain dehydrogenase; Provisional	99.04
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.92
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.86
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.74
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.72
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.7
PRK09620	229	hypothetical protein; Provisional	98.68
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.64
PTZ00325	321	malate dehydrogenase; Provisional	98.62
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.61
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.56
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.54
PLN00106	323	malate dehydrogenase	98.5
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.5
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.48
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.41
COG3268	382	Uncharacterized conserved protein [Function unknow	98.35
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.33
PRK14982	340	acyl-ACP reductase; Provisional	98.26
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.24
PRK05086	312	malate dehydrogenase; Provisional	98.21
KOG2774	366	consensus NAD dependent epimerase [General functio	98.2
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.19
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.17
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.13
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.13
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.1
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.04
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.95
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.93
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.92
PRK09496	453	trkA potassium transporter peripheral membrane com	97.89
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.83
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.8
PRK04148	134	hypothetical protein; Provisional	97.78
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.77
PRK09496	453	trkA potassium transporter peripheral membrane com	97.75
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.75
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.73
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.71
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.7
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.7
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.67
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.63
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.6
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.58
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.57
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.56
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.55
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.5
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.47
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.46
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.46
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.45
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.4
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.4
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.4
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.39
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	97.38
PRK08223	287	hypothetical protein; Validated	97.36
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.36
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.35
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.34
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.34
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.34
PRK05442	326	malate dehydrogenase; Provisional	97.33
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.32
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.32
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.31
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.31
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.31
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.3
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.29
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.28
PLN02383	344	aspartate semialdehyde dehydrogenase	97.27
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.25
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.24
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.23
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.23
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.23
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.22
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.21
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.2
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.19
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.19
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.16
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.15
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.14
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.14
PRK10669	558	putative cation:proton antiport protein; Provision	97.14
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.13
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.13
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	97.11
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.09
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.09
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.06
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.06
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.04
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.04
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.02
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.01
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.01
PRK06849	389	hypothetical protein; Provisional	97.0
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.99
PTZ00117	319	malate dehydrogenase; Provisional	96.98
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.97
PRK06223	307	malate dehydrogenase; Reviewed	96.96
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.96
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.95
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.95
PRK08328	231	hypothetical protein; Provisional	96.94
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.94
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.94
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.93
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.92
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.92
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.91
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.91
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.91
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.9
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.9
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.9
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.89
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.89
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.88
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.86
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.86
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.83
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.83
PRK08655	437	prephenate dehydrogenase; Provisional	96.83
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.83
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.82
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.8
PLN00203	519	glutamyl-tRNA reductase	96.79
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.78
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.78
PLN02928	347	oxidoreductase family protein	96.77
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.77
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.77
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.76
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.76
PRK14851	679	hypothetical protein; Provisional	96.75
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.74
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.73
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.73
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.72
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.71
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.7
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.69
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.68
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.68
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.68
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.67
PRK14852	989	hypothetical protein; Provisional	96.67
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.67
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.66
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.64
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.64
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.64
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.63
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.62
PLN02602	350	lactate dehydrogenase	96.62
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.61
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.61
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.59
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.58
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.57
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.57
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.56
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.55
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.55
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.53
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.53
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.52
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.52
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.51
PRK07574	385	formate dehydrogenase; Provisional	96.5
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	96.5
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.49
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.48
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.48
PLN02494	477	adenosylhomocysteinase	96.47
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.46
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.45
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.45
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.43
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.42
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.41
PRK10537	393	voltage-gated potassium channel; Provisional	96.4
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.4
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.39
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.39
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.38
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.37
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.36
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.36
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.35
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.33
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.33
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.32
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.32
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.32
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.31
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.3
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.27
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.26

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=1.4e-22  Score=163.32  Aligned_cols=144  Identities=24%  Similarity=0.350  Sum_probs=120.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+||||||+||||++.+..|++.|++|++++.-.... .+..      ......++++|+.|.+.+.+.|+  ++|.|+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~-~~~v------~~~~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH-KIAL------LKLQFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC-HHHh------hhccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            6899999999999999999999999999998654322 1111      11116889999999999999997  7999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc----ccCCC----CccccCCCCchHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE----FGNDV----DRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~----~g~~~----~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      .||...               +.++.+|+++|.+.+ ++++|+||    ||...    .|+.+..|.++|+.||...|++
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~i  152 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEI  152 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHH
Confidence            999875               445799999999999 99999864    66543    5677888999999999999999


Q ss_pred             HH----HcCCCEEEEeccCch
Q 044721          140 VE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       140 ~~----~~~~~~~~gr~~n~~  156 (263)
                      ++    ..++++++.|++|..
T Consensus       153 L~d~~~a~~~~~v~LRYFN~a  173 (329)
T COG1087         153 LRDAAKANPFKVVILRYFNVA  173 (329)
T ss_pred             HHHHHHhCCCcEEEEEecccc
Confidence            95    568999999999953

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.90  E-value=6e-24  Score=160.22  Aligned_cols=210  Identities=18%  Similarity=0.123  Sum_probs=157.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhcc-CCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKK-LGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +.+..+||||+.+||+++++.|++.|++|.+.+++...    ..+....+.+ .+...+.+|++++.+++..++      
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~----A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAA----AEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhh----HHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999998532    2223344433 356778999999888776554      


Q ss_pred             -CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           76 -QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                       .++++|||||+..-    .++-.+++.+ +..+            ..+|....+..+++++..++...+-   -++++|
T Consensus        89 g~psvlVncAGItrD----~~Llrmkq~q-wd~v------------i~vNL~gvfl~tqaa~r~~~~~~~~---~~sIiN  148 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRD----GLLLRMKQEQ-WDSV------------IAVNLTGVFLVTQAAVRAMVMNQQQ---GLSIIN  148 (256)
T ss_pred             CCCcEEEEcCccccc----cceeeccHHH-HHHH------------HHhhchhhHHHHHHHHHHHHHhcCC---CceEEe
Confidence             68999999998741    1122233333 3222            2234466778899988887654331   257888


Q ss_pred             chhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCC
Q 044721          155 HGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIP  234 (263)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .+++.             +..+..+|..|.+++.....|++..+.|++..+||||.|+||...+++.+.+..-...+   
T Consensus       149 vsSIV-------------GkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~k---  212 (256)
T KOG1200|consen  149 VSSIV-------------GKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDK---  212 (256)
T ss_pred             ehhhh-------------cccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHH---
Confidence            88887             78888899999999999999999999999999999999999998888877664433322   


Q ss_pred             eeEEecccccccccCCCCCCCCCCC
Q 044721          235 YTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                             -..-.|++|++++||+|.
T Consensus       213 -------i~~~iPmgr~G~~EevA~  230 (256)
T KOG1200|consen  213 -------ILGMIPMGRLGEAEEVAN  230 (256)
T ss_pred             -------HHccCCccccCCHHHHHH
Confidence                   122347899999999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.6e-22  Score=164.68  Aligned_cols=213  Identities=14%  Similarity=0.169  Sum_probs=134.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     ++.+. .+.+   .+.++..+.+|++|+++++++++   
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNE-----ENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999983     23221 1222   13467889999999999888775   


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||+|......    ...-++...+                     .|....+..++...+.+.++.     
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~---------------------~n~~~~~~~~~~~l~~m~~~~-----  135 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVK---------------------LLLYPAVYLTRALVPAMERKG-----  135 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHH---------------------HHhHHHHHHHHHHHHHHHHcC-----
Confidence               5899999999653111    0011111111                     111334555666665554432     


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH-H
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR-A  227 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~-~  227 (263)
                      .|+++++++..             +..+......|.++|.+...+++.++.++++++||||+|+||+..++....... .
T Consensus       136 ~g~Ii~isS~~-------------~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~  202 (263)
T PRK08339        136 FGRIIYSTSVA-------------IKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDR  202 (263)
T ss_pred             CCEEEEEcCcc-------------ccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhh
Confidence            25666555543             222333445677777777779999999999999999999999887664332111 0


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ....+..............+++|+.+|+|+|+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  234 (263)
T PRK08339        203 AKREGKSVEEALQEYAKPIPLGRLGEPEEIGY  234 (263)
T ss_pred             hhccCCCHHHHHHHHhccCCcccCcCHHHHHH
Confidence            00011110000011123356788889988764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.86  E-value=2.3e-21  Score=156.78  Aligned_cols=177  Identities=18%  Similarity=0.203  Sum_probs=132.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhc---cCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFK---KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~---~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ++++++++|||||++||..+++.|+++|++|+++.|+     .++++.+. ++.   +-.+.++.+|++++++++++.+ 
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~-----~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~   77 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARR-----EDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDE   77 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-----HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHH
Confidence            3567899999999999999999999999999999999     66655332 332   2347889999999999888764 


Q ss_pred             ------CcCEEEEcCCCccchhHHHH----HHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLGDQVKI----IAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~~~~~l----~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            .+|++|||||.........+    .+.+.+                     +|.......++..+..++++.. 
T Consensus        78 l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~---------------------lN~~a~~~LT~~~lp~m~~~~~-  135 (265)
T COG0300          78 LKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQ---------------------LNILALTRLTKAVLPGMVERGA-  135 (265)
T ss_pred             HHhcCCcccEEEECCCcCCccchhhCChHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHhcCC-
Confidence                  59999999998863321100    001111                     1113344557777777777654 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                          |.+.|+.|..             +..+......|.++|+....+...|..|+.+.+++|.+++||+..++..
T Consensus       136 ----G~IiNI~S~a-------------g~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~  194 (265)
T COG0300         136 ----GHIINIGSAA-------------GLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFF  194 (265)
T ss_pred             ----ceEEEEechh-------------hcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccc
Confidence                6777777777             5566667778888888888899999999999999999999998766554

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.84  E-value=3.3e-19  Score=151.49  Aligned_cols=136  Identities=30%  Similarity=0.431  Sum_probs=111.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|+||||||+||++++++|+++|++|++++|+.+     +..   .+...+++++.+|++|++++.++++++|+|||++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~-----~~~---~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~   72 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLR-----KAS---FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAS   72 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChH-----Hhh---hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence            58999999999999999999999999999999842     221   1123468999999999999999999999999997


Q ss_pred             CCcc----------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           85 GHTL----------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        85 ~~~~----------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                      +...          ...+.++++++.+.+ ++++|+ |+++....      +..+|..+|..+|+++++.+++|++.|..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~------~~~~~~~~K~~~e~~l~~~~l~~tilRp~  145 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY------PYIPLMKLKSDIEQKLKKSGIPYTIFRLA  145 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc------CCChHHHHHHHHHHHHHHcCCCeEEEeec
Confidence            6432          234689999999999 999986 76653211      23568889999999999999999999976


Q ss_pred             Cc
Q 044721          154 NH  155 (263)
Q Consensus       154 n~  155 (263)
                      ++
T Consensus       146 ~~  147 (317)
T CHL00194        146 GF  147 (317)
T ss_pred             HH
Confidence            43

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.84  E-value=9e-20  Score=150.63  Aligned_cols=143  Identities=22%  Similarity=0.287  Sum_probs=109.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +++++|||||||||++|++.|+++||+|+++.|+++.  +++.+.+..+.  .++...+.+|++|.+++.+++++||.||
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~--~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED--EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch--hhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            5899999999999999999999999999999999754  33333444443  3458999999999999999999999999


Q ss_pred             EcCCCcc--------------chhHHHHHHHHHHhCCcceeee-ccccCC------CCccccCCC------------Cch
Q 044721           82 STVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SEFGND------VDRVHAVEP------------AKS  128 (263)
Q Consensus        82 ~~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~------~~~~~~~~~------------~~~  128 (263)
                      |.|.+..              +.++.+++++|.+..+|+|+|+ ||...-      .+.....+.            ...
T Consensus        84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~  163 (327)
T KOG1502|consen   84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW  163 (327)
T ss_pred             EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence            9999865              4567899999999988999986 553321      111111111            135


Q ss_pred             HHHHHHHHHHHH----HHcCCCEE
Q 044721          129 AFATKAKIRRAV----EAEGIPYT  148 (263)
Q Consensus       129 ~~~~k~~~e~~~----~~~~~~~~  148 (263)
                      |..+|..+|+..    ++.+++.+
T Consensus       164 Y~~sK~lAEkaAw~fa~e~~~~lv  187 (327)
T KOG1502|consen  164 YALSKTLAEKAAWEFAKENGLDLV  187 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEE
Confidence            778999888765    55666654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.84  E-value=1.7e-21  Score=160.66  Aligned_cols=218  Identities=20%  Similarity=0.183  Sum_probs=138.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +.+|+++|||++.+||++++++|++.|++|++++|+.+.....+.+.... ..+.++..+.+|+++.++++++++     
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999953211111110010 113458889999998877665543     


Q ss_pred             ---CcCEEEEcCCCccchh-----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ---QVDVVISTVGHTLLGD-----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~-----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                         ++|++|||||......     ..+.++...+                     .|...+++..+..+..++++.+   
T Consensus        86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~---------------------~Nl~G~~~~~~~~a~~~~~~~~---  141 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMA---------------------TNLRGSAFCLKQAARPMLKKSK---  141 (270)
T ss_pred             hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHh---------------------hhchhHHHHHHHHHHHHHHhcC---
Confidence               6999999999875321     1112222222                     2324467777777777777643   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhH-HHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQ-VKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                       .|.+.+.++..             +....... ..|..+|.+...++|.++.||++++||||+|+||...++.......
T Consensus       142 -gg~I~~~ss~~-------------~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~  207 (270)
T KOG0725|consen  142 -GGSIVNISSVA-------------GVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLD  207 (270)
T ss_pred             -CceEEEEeccc-------------cccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccc
Confidence             13333333332             22222222 7888999998889999999999999999999999877765110000


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAPP  260 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  260 (263)
                      ....+.....   .......+++|+++|+|++..
T Consensus       208 ~~~~~~~~~~---~~~~~~~p~gr~g~~~eva~~  238 (270)
T KOG0725|consen  208 DGEMEEFKEA---TDSKGAVPLGRVGTPEEVAEA  238 (270)
T ss_pred             cchhhHHhhh---hccccccccCCccCHHHHHHh
Confidence            0000000000   112334589999999998753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=1e-21  Score=163.24  Aligned_cols=182  Identities=14%  Similarity=0.128  Sum_probs=119.4

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ||++|+++||||++  +||++++++|+++|++|++.+|+...  .++.+.+ +..  .....+++|++|+++++++++  
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~--~~~~~~~~~~~--g~~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL--GKRVKPLAESL--GSDFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH--HHHHHHHHHhc--CCceEEeCCCCCHHHHHHHHHHH
Confidence            46778999999997  99999999999999999999887311  1111111 111  123568999999999887765  


Q ss_pred             -----CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 -----QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                           ++|++|||||....... ..+.+ ..... +.+.            ...|....+..+|..+..+. + +     
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~-~~~~~-~~~~------------~~vn~~~~~~l~~~~~~~m~-~-~-----  138 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYAD-TTREN-FSRT------------MVISCFSFTEIAKRAAKLMP-D-G-----  138 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhh-cCHHH-HHHH------------HhhhhhhHHHHHHHHHHhhc-c-C-----
Confidence                 68999999996531100 00000 00011 1111            11223445666777665553 2 1     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      |+++|+++..             +.........|..+|++...++|.++.+|++++||||+|+||+..++.
T Consensus       139 G~Iv~isS~~-------------~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        139 GSMLTLTYGG-------------STRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             ceEEEEcCCC-------------ccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence            5666655443             222233455789999999889999999999999999999999876643

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.83  E-value=4.2e-19  Score=152.73  Aligned_cols=155  Identities=16%  Similarity=0.117  Sum_probs=115.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh---hhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD---HFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      +++|+|+|||||||||++++++|+++|++|++++|..............   .....++.++.+|+.|.+.+.++++++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            3568999999999999999999999999999999864321110100000   0011357789999999999999999999


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC----CccccCCCCchHHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV----DRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~----~~~~~~~~~~~~~~~k~~  135 (263)
                      +|||+|+...               +.++.++++++.+.+ ++++++ |+   ||...    .+..+..|.+.|+.+|..
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~  171 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYV  171 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHH
Confidence            9999998643               345689999999999 988884 43   55321    233345677889999999


Q ss_pred             HHHHHH----HcCCCEEEEeccCchh
Q 044721          136 IRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       136 ~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      .|.+++    +.++++++.|..|..+
T Consensus       172 ~e~~~~~~~~~~~~~~~~lR~~~vyG  197 (348)
T PRK15181        172 NELYADVFARSYEFNAIGLRYFNVFG  197 (348)
T ss_pred             HHHHHHHHHHHhCCCEEEEEecceeC
Confidence            999874    4589999999877543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=3.4e-21  Score=158.51  Aligned_cols=211  Identities=12%  Similarity=0.075  Sum_probs=131.4

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+  ++||++++++|+++|++|++++|+.     ...+.++++...++..+++|++|+++++++++    
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-----RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-----HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            467899999999  7999999999999999999999872     22222333333457889999999998887664    


Q ss_pred             ---CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 ---QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                         ++|++|||||....... ..+.+ ....+ +            ......|....+..++.....+ ++.      |+
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~-~~~~~-~------------~~~~~in~~~~~~l~~~~~~~~-~~~------g~  138 (252)
T PRK06079         80 RVGKIDGIVHAIAYAKKEELGGNVTD-TSRDG-Y------------ALAQDISAYSLIAVAKYARPLL-NPG------AS  138 (252)
T ss_pred             HhCCCCEEEEcccccccccccCCccc-CCHHH-H------------HHHhCcccHHHHHHHHHHHHhc-ccC------ce
Confidence               58999999996531000 00000 00000 0            0111122234455566655433 221      45


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++|+++..             +..+......|.++|.+...+++.++.++++.+|+||+|+||...++.......   ..
T Consensus       139 Iv~iss~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~---~~  202 (252)
T PRK06079        139 IVTLTYFG-------------SERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG---HK  202 (252)
T ss_pred             EEEEeccC-------------ccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC---hH
Confidence            55544433             223334556788999999889999999999999999999999876653211000   00


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..     ........+++|+++|+|+|.
T Consensus       203 ~~-----~~~~~~~~p~~r~~~pedva~  225 (252)
T PRK06079        203 DL-----LKESDSRTVDGVGVTIEEVGN  225 (252)
T ss_pred             HH-----HHHHHhcCcccCCCCHHHHHH
Confidence            00     000112245688888888765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=4.9e-21  Score=157.43  Aligned_cols=211  Identities=14%  Similarity=0.172  Sum_probs=135.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+++||++++++|+++|++|++++|+..   +...+.++.. +.++..+.+|++|+++++++++       
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA---PETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH---HHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999888631   1111122222 3467889999999999888775       


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ++|++|||||.........    ..... +.+            ....|....+..++.....+.++..    .|+++++
T Consensus        83 ~iD~lv~~ag~~~~~~~~~----~~~~~-~~~------------~~~vN~~~~~~l~~~~~~~~~~~~~----~g~ii~i  141 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLE----FGNKD-WDD------------VININQKTVFFLSQAVAKQFVKQGN----GGKIINI  141 (251)
T ss_pred             CCCEEEECCCcCCCCCccc----CCHHH-HHH------------HheeCcHHHHHHHHHHHHHHHHcCC----CCEEEEe
Confidence            5899999999753211000    00000 110            1112224556677877777765431    1566666


Q ss_pred             hhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCCe
Q 044721          156 GSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPY  235 (263)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++....             .+......|..+|.+...+++.++.++++.++++|+|+||+..++....+..    .+   
T Consensus       142 sS~~~~-------------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~----~~---  201 (251)
T PRK12481        142 ASMLSF-------------QGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA----DT---  201 (251)
T ss_pred             CChhhc-------------CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc----Ch---
Confidence            665522             1222334688888888889999999999999999999999887654322110    00   


Q ss_pred             eEEecccccccccCCCCCCCCCCC
Q 044721          236 TYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       ..........+++++++|+|+|.
T Consensus       202 -~~~~~~~~~~p~~~~~~peeva~  224 (251)
T PRK12481        202 -ARNEAILERIPASRWGTPDDLAG  224 (251)
T ss_pred             -HHHHHHHhcCCCCCCcCHHHHHH
Confidence             00001122346677888888764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-20  Score=154.59  Aligned_cols=174  Identities=18%  Similarity=0.169  Sum_probs=119.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+.    ..++..+++|++|++++.++++  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDA-----ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999984     2222 122221    2357789999999998888775  


Q ss_pred             -----CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||.......    ..-++...+                     .|....+..++...+.+.++.   
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~---------------------~n~~~~~~~~~~~~~~~~~~~---  136 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFA---------------------VDLDGAWNGCRAVLPGMVERG---  136 (260)
T ss_pred             HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHH---------------------hhhHHHHHHHHHHHHHHHhhC---
Confidence                 68999999996532111    001111111                     111344555666666555443   


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        .|+++++++..             +.....+...|..+|.+...+++.++.++++.+|+||+|+||+..++.
T Consensus       137 --~g~iv~isS~~-------------~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~  195 (260)
T PRK07063        137 --RGSIVNIASTH-------------AFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL  195 (260)
T ss_pred             --CeEEEEECChh-------------hccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence              25666665554             222333445678888887778899999999999999999999876654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.81  E-value=7.6e-19  Score=142.85  Aligned_cols=144  Identities=37%  Similarity=0.501  Sum_probs=116.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGH   86 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~~   86 (263)
                      |+|+||||.+|+++++.|++.+++|+++.|+..     + ...+.+...+++++++|+.|++++.++|+++|+||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~-----~-~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS-----S-DRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH-----H-HHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc-----h-hhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            799999999999999999999999999999942     1 1123334467899999999999999999999999999984


Q ss_pred             c---cchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchh
Q 044721           87 T---LLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGS  157 (263)
Q Consensus        87 ~---~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~  157 (263)
                      .   ......+++++++++| ++++++|+++..........|..+++..|..+|+++++.+++|++.+...+..
T Consensus        75 ~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e  147 (233)
T PF05368_consen   75 SHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFME  147 (233)
T ss_dssp             SCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHH
T ss_pred             chhhhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhh
Confidence            4   3667789999999999 99999999887665433334456678899999999999999999998666543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.1e-20  Score=153.79  Aligned_cols=218  Identities=17%  Similarity=0.123  Sum_probs=124.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.........+......+.++..+.+|++|.++++++++       
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999999999999843211000111111112357788999999998877654       


Q ss_pred             CcCEEEEcCCCccchhHHH----HHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGDQVK----IIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~----l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||||.........    -++...+.                     |....+..++.....+.+..     .|+
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~~~~~~~~~~~~~~-----~g~  140 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELEL---------------------KYFSVINPTRAFLPLLRASA-----AAS  140 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHhccC-----CcE
Confidence            5899999999753111000    00000000                     11222333444433332221     134


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++++++..             +..+..+...|..++++...+++.++.+++..++++|+|+||+..++............
T Consensus       141 iv~isS~~-------------~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~  207 (265)
T PRK07062        141 IVCVNSLL-------------ALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADP  207 (265)
T ss_pred             EEEecccc-------------ccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhcc
Confidence            44443333             22222334556666666666788888999999999999999987665432211100111


Q ss_pred             CCCeeEEecc--cccccccCCCCCCCCCCC
Q 044721          232 GIPYTYVASN--FFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       232 ~~~~~~~~~~--~~~~~~~~~~~~~~e~~~  259 (263)
                      +..+......  .....+++|+.+|+|+|.
T Consensus       208 ~~~~~~~~~~~~~~~~~p~~r~~~p~~va~  237 (265)
T PRK07062        208 GQSWEAWTAALARKKGIPLGRLGRPDEAAR  237 (265)
T ss_pred             CCChHHHHHHHhhcCCCCcCCCCCHHHHHH
Confidence            1111110000  113457788888888764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.81  E-value=7.7e-20  Score=151.27  Aligned_cols=219  Identities=19%  Similarity=0.164  Sum_probs=128.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+......++..+++|++|.+++.++++       
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA-----AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999983     33332222223457789999999988877664       


Q ss_pred             CcCEEEEcCCCccchh-HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           76 QVDVVISTVGHTLLGD-QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~-~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ++|++|||||...... ....-+...... +++            ....|....+...+.....+.+..      |++++
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~-~~~------------~~~~N~~~~~~l~~~~~~~~~~~~------g~iv~  139 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEA-FDE------------VFHINVKGYLLAVKAALPALVASR------GSVIF  139 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHH-HHH------------hheeecHhHHHHHHHHHHHHhhcC------CCEEE
Confidence            6899999998642100 000000000000 111            111122334455666555443322      22332


Q ss_pred             chhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCC
Q 044721          155 HGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIP  234 (263)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ..+..             +..+......|..+|.+...+++.++.+|++. ++||+|+||...++...............
T Consensus       140 ~sS~~-------------~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~  205 (262)
T TIGR03325       140 TISNA-------------GFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSIS  205 (262)
T ss_pred             Eeccc-------------eecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcccccccccccccc
Confidence            22221             11122233467788888777889999999987 99999999987665432110000000000


Q ss_pred             eeEEecccc-cccccCCCCCCCCCCCC
Q 044721          235 YTYVASNFF-AGYFLPNLSQPGATAPP  260 (263)
Q Consensus       235 ~~~~~~~~~-~~~~~~~~~~~~e~~~~  260 (263)
                      .... .... ...+++|+.+|+|+|..
T Consensus       206 ~~~~-~~~~~~~~p~~r~~~p~eva~~  231 (262)
T TIGR03325       206 TVPL-GDMLKSVLPIGRMPDAEEYTGA  231 (262)
T ss_pred             ccch-hhhhhhcCCCCCCCChHHhhhh
Confidence            0000 1111 23578999999998764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=1.1e-19  Score=149.96  Aligned_cols=218  Identities=13%  Similarity=0.107  Sum_probs=129.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc-cCCcEEEEccCCCHHHHHHHhc-------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-KLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+. ..++..+++|++|+++++++++       
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNE-----ENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999983     3322 112221 1357889999999999887764       


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ++|++|||||...... ..+.+. .... +.            +....+....+..++..+..++++.+    .|+++++
T Consensus        76 ~id~li~naG~~~~~~-~~~~~~-~~~~-~~------------~~~~~n~~~~~~~~~~~l~~~~~~~~----~g~iv~i  136 (259)
T PRK08340         76 GIDALVWNAGNVRCEP-CMLHEA-GYSD-WL------------EAALLHLVAPGYLTTLLIQAWLEKKM----KGVLVYL  136 (259)
T ss_pred             CCCEEEECCCCCCCCc-cccccc-cHHH-HH------------HHHhhcchHHHHHHHHHHHHHHhcCC----CCEEEEE
Confidence            6899999999642100 000000 0000 00            00001112334445555555543222    1444444


Q ss_pred             hhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHH-HHHHHHHcCCC
Q 044721          156 GSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAK-IRRAVEAEGIP  234 (263)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~-~~~~~~~~~~~  234 (263)
                      ++..             +..+......|..+|.+...+++.++.++++.+|++|+|+||+..++.... +....+..+..
T Consensus       137 sS~~-------------~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  203 (259)
T PRK08340        137 SSVS-------------VKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVS  203 (259)
T ss_pred             eCcc-------------cCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCc
Confidence            4332             222233445677777777778899999999999999999999877765322 11122211111


Q ss_pred             eeEE-ecccccccccCCCCCCCCCCC
Q 044721          235 YTYV-ASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       235 ~~~~-~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .... ........+++|+.+|+|+|.
T Consensus       204 ~~~~~~~~~~~~~p~~r~~~p~dva~  229 (259)
T PRK08340        204 FEETWEREVLERTPLKRTGRWEELGS  229 (259)
T ss_pred             hHHHHHHHHhccCCccCCCCHHHHHH
Confidence            1000 011123457889999998874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.80  E-value=7.9e-20  Score=151.24  Aligned_cols=221  Identities=20%  Similarity=0.149  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++..+++|++|+++++++++      
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS-----AEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999998     333332222223457889999999998887765      


Q ss_pred             -CcCEEEEcCCCccch-hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           76 -QVDVVISTVGHTLLG-DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~-~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                       ++|++|||||..... ...+.-..-.+.. +.+.            ...|....+...+.....+.+. +     |+++
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~-~~~~------------~~~n~~~~~~~~~~~~~~~~~~-~-----g~iv  139 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTA-FDEI------------FNVNVKGYLLGAKAALPALKAS-G-----GSMI  139 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHH-HHHH------------eeeccHhHHHHHHHHHHHHHhc-C-----CEEE
Confidence             689999999964210 0000000000000 0000            1112233445566655553322 2     4555


Q ss_pred             CchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCC
Q 044721          154 NHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGI  233 (263)
Q Consensus       154 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~  233 (263)
                      +.++...             ..+..+...|..+|.+...+.+.++.++++. |+||+|+||+..++..............
T Consensus       140 ~~sS~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~  205 (263)
T PRK06200        140 FTLSNSS-------------FYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSI  205 (263)
T ss_pred             EECChhh-------------cCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCccc
Confidence            5544442             1122334468888888878899999999885 9999999998766542110000000000


Q ss_pred             C-eeEEecccccccccCCCCCCCCCCCC
Q 044721          234 P-YTYVASNFFAGYFLPNLSQPGATAPP  260 (263)
Q Consensus       234 ~-~~~~~~~~~~~~~~~~~~~~~e~~~~  260 (263)
                      . ............+++|+.+|+|++..
T Consensus       206 ~~~~~~~~~~~~~~p~~r~~~~~eva~~  233 (263)
T PRK06200        206 SDSPGLADMIAAITPLQFAPQPEDHTGP  233 (263)
T ss_pred             ccccchhHHhhcCCCCCCCCCHHHHhhh
Confidence            0 00001111223578899999998764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.80  E-value=3.7e-19  Score=146.51  Aligned_cols=81  Identities=26%  Similarity=0.343  Sum_probs=64.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh----ccCCcEEEEccCCCHHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF----KKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+..     +.+ ..+.+    ....+.++++|++|++++.++++
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKE-----ALNELLESLGKEFKSKKLSLVELDITDQESLEEFLS   75 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChH-----HHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHH
Confidence            778999999999999999999999999999999998842     222 11222    12345677999999999988776


Q ss_pred             -------CcCEEEEcCCC
Q 044721           76 -------QVDVVISTVGH   86 (263)
Q Consensus        76 -------~~d~vv~~a~~   86 (263)
                             ++|++||||+.
T Consensus        76 ~~~~~~~~id~vi~~A~~   93 (256)
T PRK09186         76 KSAEKYGKIDGAVNCAYP   93 (256)
T ss_pred             HHHHHcCCccEEEECCcc
Confidence                   38999999974

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.80  E-value=1.9e-19  Score=141.94  Aligned_cols=81  Identities=20%  Similarity=0.287  Sum_probs=67.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|.++|||||++||.+++++|++.|++|++..|+     .++++.+. ++....+..+..|++|.++++++++      
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR-----~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARR-----EERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecc-----HHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            46789999999999999999999999999999999     66665443 3322468899999999988666554      


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|++|||||...
T Consensus        80 g~iDiLvNNAGl~~   93 (246)
T COG4221          80 GRIDILVNNAGLAL   93 (246)
T ss_pred             CcccEEEecCCCCc
Confidence             7999999999875

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.80  E-value=2.7e-18  Score=146.31  Aligned_cols=143  Identities=25%  Similarity=0.329  Sum_probs=112.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |+++|+++||||+|+||+++++.|+++|  ++|++++|+..     +...+ ..+...++.++.+|++|.+++.++++++
T Consensus         1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~-----~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i   75 (324)
T TIGR03589         1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDEL-----KQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV   75 (324)
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChh-----HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC
Confidence            6788999999999999999999999986  78999888732     21111 1222246788999999999999999999


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      |+|||+||...               +.++.++++++.+.+ ++++|+ |+..       +..|.++|+.+|.++|.+++
T Consensus        76 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~-------~~~p~~~Y~~sK~~~E~l~~  147 (324)
T TIGR03589        76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK-------AANPINLYGATKLASDKLFV  147 (324)
T ss_pred             CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC-------CCCCCCHHHHHHHHHHHHHH
Confidence            99999998643               234678999999988 888875 5532       23456789999999999874


Q ss_pred             H-------cCCCEEEEeccCch
Q 044721          142 A-------EGIPYTYGDVLNHG  156 (263)
Q Consensus       142 ~-------~~~~~~~gr~~n~~  156 (263)
                      .       .+++++..|+.|..
T Consensus       148 ~~~~~~~~~gi~~~~lR~g~v~  169 (324)
T TIGR03589       148 AANNISGSKGTRFSVVRYGNVV  169 (324)
T ss_pred             HHHhhccccCcEEEEEeeccee
Confidence            3       57888888887764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-19  Score=148.82  Aligned_cols=206  Identities=17%  Similarity=0.163  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     ++.+. .+.+.  +.++..+.+|++|+++++++++   
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL-----DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999983     23221 12221  2457788999999999887764   


Q ss_pred             ----CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||.......    ..-++.+.+.                     |....+..++.....+.++..   
T Consensus        82 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~~~~~~~~~~~~~~~---  137 (253)
T PRK05867         82 AELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNT---------------------NVTGVFLTAQAAAKAMVKQGQ---  137 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHh---------------------cchhHHHHHHHHHHHHHhcCC---
Confidence                78999999997542211    1111111111                     224456667766666655421   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                       -+++++.++.......           .......|..+|.+...+++.++.++++.+|++|+|+||+..++........
T Consensus       138 -~g~iv~~sS~~~~~~~-----------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~  205 (253)
T PRK05867        138 -GGVIINTASMSGHIIN-----------VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY  205 (253)
T ss_pred             -CcEEEEECcHHhcCCC-----------CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH
Confidence             1344444444311000           0012246778888887799999999999999999999998766543221111


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .+           .+....+++|+.+|+|+|.
T Consensus       206 ~~-----------~~~~~~~~~r~~~p~~va~  226 (253)
T PRK05867        206 QP-----------LWEPKIPLGRLGRPEELAG  226 (253)
T ss_pred             HH-----------HHHhcCCCCCCcCHHHHHH
Confidence            00           0112235677778877764

>PLN02214 cinnamoyl-CoA reductase

Probab=99.80  E-value=2.2e-18  Score=147.87  Aligned_cols=151  Identities=22%  Similarity=0.208  Sum_probs=113.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|+|+||||+||||+++++.|+++|++|++++|+....   ....+..+.  ..++.++.+|++|.+++.++++++|+|
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   85 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDP---KNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGV   85 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhh---hHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEE
Confidence            467999999999999999999999999999999984321   111111111  135788999999999999999999999


Q ss_pred             EEcCCCcc----------chhHHHHHHHHHHhCCcceeee-cc----ccCC-------CCccc------cCCCCchHHHH
Q 044721           81 ISTVGHTL----------LGDQVKIIAAIKEAGNIKRFFP-SE----FGND-------VDRVH------AVEPAKSAFAT  132 (263)
Q Consensus        81 v~~a~~~~----------~~~~~~l~~~~~~~~~~~~~i~-S~----~g~~-------~~~~~------~~~~~~~~~~~  132 (263)
                      ||+|+...          +..+.++++++.+.+ ++++|+ ||    |+..       .+++.      +.+|.+.|..+
T Consensus        86 ih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~s  164 (342)
T PLN02214         86 FHTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYG  164 (342)
T ss_pred             EEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHH
Confidence            99998753          345789999999999 988874 54    3321       12221      23356789999


Q ss_pred             HHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          133 KAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       133 k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      |.++|+++.    +.++++++.|..+..+
T Consensus       165 K~~aE~~~~~~~~~~g~~~v~lRp~~vyG  193 (342)
T PLN02214        165 KMVAEQAAWETAKEKGVDLVVLNPVLVLG  193 (342)
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEeCCceEC
Confidence            999999984    3589999988777544

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=2.9e-18  Score=147.28  Aligned_cols=150  Identities=19%  Similarity=0.274  Sum_probs=111.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hh---ccCCcEEEEccCCCHHHHHHHhcC--cC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HF---KKLGVNLVIGDVLNHESLVKAIKQ--VD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~~~~D~~~~~~~~~~~~~--~d   78 (263)
                      |+||||||+||||++++++|+++|++|++++|++........+.+. ..   ...++.++.+|++|.+++.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999985321011111110 00   023578999999999999999984  69


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcc---eeee-cc---ccCC----CCccccCCCCchHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIK---RFFP-SE---FGND----VDRVHAVEPAKSAFAT  132 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~---~~i~-S~---~g~~----~~~~~~~~~~~~~~~~  132 (263)
                      +|||+|+...               +.++.++++++.+.+ ++   ++++ |+   ||..    .+++.+..|.++|+.+
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s  159 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAA  159 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHH
Confidence            9999999643               124678999999887 64   5653 54   5532    2455566788899999


Q ss_pred             HHHHHHHHH----HcCCCEEEEeccCc
Q 044721          133 KAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       133 k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      |.++|.+++    +.+++++.+|+.|.
T Consensus       160 K~~~e~~~~~~~~~~~~~~~~~~~~~~  186 (343)
T TIGR01472       160 KLYAHWITVNYREAYGLFAVNGILFNH  186 (343)
T ss_pred             HHHHHHHHHHHHHHhCCceEEEeeccc
Confidence            999999984    34788888887764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-19  Score=148.08  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=62.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     ...+..+.+.  ..++..+.+|++|.+++.++++     
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-----LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-----HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999973     1212222221  2356788999999988877665     


Q ss_pred             --CcCEEEEcCCC
Q 044721           76 --QVDVVISTVGH   86 (263)
Q Consensus        76 --~~d~vv~~a~~   86 (263)
                        ++|++|||||.
T Consensus        82 ~~~id~lv~nAg~   94 (260)
T PRK12823         82 FGRIDVLINNVGG   94 (260)
T ss_pred             cCCCeEEEECCcc
Confidence              68999999985

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=1e-19  Score=150.44  Aligned_cols=215  Identities=13%  Similarity=0.063  Sum_probs=129.0

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||  +++||+++++.|+++|++|++.+|+...  .+..+.+... ......+++|++|+++++++++    
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL--EERVRKMAAE-LDSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH--HHHHHHHHhc-cCCceEEECCCCCHHHHHHHHHHHHH
Confidence            46789999997  6799999999999999999998775211  1222211111 1234578999999999888774    


Q ss_pred             ---CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 ---QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                         ++|++|||||....... ...++...... +...            ...|....+..+|..... +++.+     |+
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~-~~~~------------~~vn~~~~~~l~~~~~p~-m~~~~-----g~  141 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREA-FNTA------------HEISAYSLPALAKAARPM-MRGRN-----SA  141 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHH-HHHH------------HHhchHHHHHHHHHHHHH-hhhcC-----cE
Confidence               68999999997531100 00011110001 1110            112223445556655443 33322     44


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++++++..             +..+..+...|..+|.+...+++.++.++++++|+||+|+||+..++....+...   .
T Consensus       142 Iv~iss~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~---~  205 (261)
T PRK08690        142 IVALSYLG-------------AVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF---G  205 (261)
T ss_pred             EEEEcccc-------------cccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch---H
Confidence            55544433             2223334556888888888899999999999999999999998776532111000   0


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .     .........+++|+.+|+|+|.
T Consensus       206 ~-----~~~~~~~~~p~~r~~~peevA~  228 (261)
T PRK08690        206 K-----LLGHVAAHNPLRRNVTIEEVGN  228 (261)
T ss_pred             H-----HHHHHhhcCCCCCCCCHHHHHH
Confidence            0     0001112346788888988875

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=6.4e-20  Score=152.61  Aligned_cols=173  Identities=16%  Similarity=0.130  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++|+++||||+  ++||+++++.|+++|++|++++|+...  .++.+.+ +.+ +.. ..+++|++|.++++++++   
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--KKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--HHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHH
Confidence            457999999997  799999999999999999999987311  1122211 222 223 578999999999887764   


Q ss_pred             ----CcCEEEEcCCCccc----hh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           76 ----QVDVVISTVGHTLL----GD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~----~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                          ++|++|||||....    ..    ...-++..                     ...|...++..++.....+. +.
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~---------------------~~vN~~g~~~l~~~~~p~m~-~~  136 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIA---------------------MEISVYSLIELTRALLPLLN-DG  136 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHH---------------------hhhhhHHHHHHHHHHHHHhc-cC
Confidence                68999999996421    00    01111111                     11222455666777665543 21


Q ss_pred             CCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          144 GIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       144 ~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                            |+++|+++..             +..+......|..+|++...+++.++.++++++|+||+|+||+..+.
T Consensus       137 ------g~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (274)
T PRK08415        137 ------ASVLTLSYLG-------------GVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL  193 (274)
T ss_pred             ------CcEEEEecCC-------------CccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence                  4555554432             22233445678999999888999999999999999999999987664

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.79  E-value=2.2e-18  Score=143.37  Aligned_cols=129  Identities=27%  Similarity=0.344  Sum_probs=98.1

Q ss_pred             EEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCC
Q 044721            8 LFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVG   85 (263)
Q Consensus         8 lVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~   85 (263)
                      |||||+||+|++|+++|+++|  ++|++++++....   .......  .....++++|++|.+++.++++++|+|||+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~---~~~~~~~--~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK---FLKDLQK--SGVKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc---cchhhhc--ccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            699999999999999999999  7899999875432   1111111  12234899999999999999999999999998


Q ss_pred             Ccc--------------chhHHHHHHHHHHhCCcceeee-ccccCCC-----------Ccc--ccCCCCchHHHHHHHHH
Q 044721           86 HTL--------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDV-----------DRV--HAVEPAKSAFATKAKIR  137 (263)
Q Consensus        86 ~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~-----------~~~--~~~~~~~~~~~~k~~~e  137 (263)
                      ...              +.++++++++|.+.+ ++++|+ ||.....           ++.  .+..+...|..||..+|
T Consensus        76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE  154 (280)
T PF01073_consen   76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAE  154 (280)
T ss_pred             cccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHH
Confidence            653              467899999999999 999985 5532211           121  22235678999999999


Q ss_pred             HHHHH
Q 044721          138 RAVEA  142 (263)
Q Consensus       138 ~~~~~  142 (263)
                      +++.+
T Consensus       155 ~~V~~  159 (280)
T PF01073_consen  155 KAVLE  159 (280)
T ss_pred             HHHHh
Confidence            99854

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.9e-18  Score=144.06  Aligned_cols=153  Identities=20%  Similarity=0.198  Sum_probs=110.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |.++++++||||+|+||+++++.|+++|++|++++|+     +++.+.+   ...++..+.+|++|.++++++++     
T Consensus         1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~-----~~~~~~l---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   72 (277)
T PRK05993          1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRK-----EEDVAAL---EAEGLEAFQLDYAEPESIAALVAQVLEL   72 (277)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHH---HHCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            5567899999999999999999999999999999998     3333322   23357889999999988877664     


Q ss_pred             ---CcCEEEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCch
Q 044721           76 ---QVDVVISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKS  128 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~  128 (263)
                         ++|++|||||.....                       .++.+++.+.+.+ .+++++ ||.....    +..+...
T Consensus        73 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~----~~~~~~~  147 (277)
T PRK05993         73 SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLV----PMKYRGA  147 (277)
T ss_pred             cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcC----CCCccch
Confidence               479999999865311                       1345666676666 666663 4432111    1222456


Q ss_pred             HHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccc
Q 044721          129 AFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRV  208 (263)
Q Consensus       129 ~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  208 (263)
                      |..+|++++.+.+                                                      .++.++...++++
T Consensus       148 Y~asK~a~~~~~~------------------------------------------------------~l~~el~~~gi~v  173 (277)
T PRK05993        148 YNASKFAIEGLSL------------------------------------------------------TLRMELQGSGIHV  173 (277)
T ss_pred             HHHHHHHHHHHHH------------------------------------------------------HHHHHhhhhCCEE
Confidence            7778887777544                                                      4456677789999


Q ss_pred             ccCCCCCcchhc
Q 044721          209 NAVEPAKSAFVT  220 (263)
Q Consensus       209 n~v~pg~~~~~~  220 (263)
                      ++|.||+..++.
T Consensus       174 ~~v~Pg~v~T~~  185 (277)
T PRK05993        174 SLIEPGPIETRF  185 (277)
T ss_pred             EEEecCCccCch
Confidence            999999876654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-19  Score=149.19  Aligned_cols=209  Identities=14%  Similarity=0.140  Sum_probs=128.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.+..   ..+..+.+.  ..++..+.+|++|+++++++++    
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG---LAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999874311   111112221  3457788999999998887765    


Q ss_pred             ---CcCEEEEcCCCccchhHH----HHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGDQV----KIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~~----~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||........    .-++...+                     .|....+...|.....+.++.+    
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~---------------------~n~~~~~~l~~~~~~~~~~~~~----  137 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMD---------------------INLTGVFLSCQAEARAMLENGG----  137 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHh---------------------hcchhhHHHHHHHHHHHHhcCC----
Confidence               479999999975421110    00111111                     1223445556665555544322    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                       ++++++++.......           .......|..+|.+...+++.++.+++..++++|+|+||+..++..... ...
T Consensus       138 -~~iv~isS~~~~~~~-----------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~  204 (254)
T PRK06114        138 -GSIVNIASMSGIIVN-----------RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMV  204 (254)
T ss_pred             -cEEEEECchhhcCCC-----------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cch
Confidence             455554444321111           0012345777777777788889999999999999999998765542110 000


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      +        .........+++|+.+|+|++.
T Consensus       205 ~--------~~~~~~~~~p~~r~~~~~dva~  227 (254)
T PRK06114        205 H--------QTKLFEEQTPMQRMAKVDEMVG  227 (254)
T ss_pred             H--------HHHHHHhcCCCCCCcCHHHHHH
Confidence            0        0001112346788888888764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.79  E-value=1e-19  Score=148.34  Aligned_cols=180  Identities=18%  Similarity=0.206  Sum_probs=127.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchh-hhhhhhccC-CcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKKL-GVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +.+|+++|||||.+||.+++..|+++|..++++.|.....  ++. +.+.+.... ++.++++|++|.++++++++    
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl--~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRL--ERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhH--HHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999999988888885432  122 222333334 49999999999999987653    


Q ss_pred             ---CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           76 ---QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                         ++|++|||||......    .+...... ++            +....|.+..-+.+|.++..+.++.+     |++
T Consensus        88 ~fg~vDvLVNNAG~~~~~~----~~~~~~~~-~~------------~~mdtN~~G~V~~Tk~alp~m~~r~~-----GhI  145 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGF----LEDTDIED-VR------------NVMDTNVFGTVYLTKAALPSMKKRND-----GHI  145 (282)
T ss_pred             hcCCCCEEEecCccccccc----cccCcHHH-HH------------HHhhhhchhhHHHHHHHHHHhhhcCC-----CeE
Confidence               8999999999874110    00000000 11            11223445666778888877776653     666


Q ss_pred             cCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCc--cccccCCCCCcchh
Q 044721          153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDV--DRVNAVEPAKSAFV  219 (263)
Q Consensus       153 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~vn~v~pg~~~~~  219 (263)
                      ++++|..             |+.+......|.++|.+...+...+-.|+.+++  +++ +|+||+..+.
T Consensus       146 VvisSia-------------G~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te  200 (282)
T KOG1205|consen  146 VVISSIA-------------GKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETE  200 (282)
T ss_pred             EEEeccc-------------cccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeec
Confidence            6666666             665555556888999998889999999999877  556 8999976554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=2e-19  Score=148.74  Aligned_cols=182  Identities=15%  Similarity=0.124  Sum_probs=116.3

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||++  +||+++++.|+++|++|++++|+.. . .+..+.+... .+.+..+.+|++|+++++++++    
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L-KGRVEEFAAQ-LGSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-H-HHHHHHHHhc-cCCceEeecCCCCHHHHHHHHHHHHh
Confidence            5678999999985  9999999999999999999888721 1 1112211111 1345678999999999988774    


Q ss_pred             ---CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 ---QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                         ++|++|||||....... ...+....... +.            .....|...++..++... .++++.      |+
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~-~~------------~~~~~n~~~~~~~~~~~~-~~~~~~------g~  140 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREG-FK------------IAHDISSYSFVAMAKACR-SMLNPG------SA  140 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHH-HH------------HHhhhhhHHHHHHHHHHH-HHhcCC------cE
Confidence               58999999996431100 00000000000 00            011122234455566543 344322      44


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      ++|+++..             +..+..+...|.++|.+...+++.++.++++.+||||+|+||+..+.
T Consensus       141 Iv~iss~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (262)
T PRK07984        141 LLTLSYLG-------------AERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL  195 (262)
T ss_pred             EEEEecCC-------------CCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence            54444332             22334455678899999888999999999999999999999987664

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=2.6e-19  Score=147.66  Aligned_cols=181  Identities=14%  Similarity=0.160  Sum_probs=117.4

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+  ++||+++++.|+++|++|++++|+...  .+..+ ..+.+.+.++..+++|++|+++++++++    
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL--EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc--hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            46899999997  899999999999999999998876321  22222 2222223467889999999998887764    


Q ss_pred             ---CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 ---QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                         ++|++|||||....... ..+.+ ....+ +            ......+....+..++.....+ ++ +     |+
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~-~~~~~-~------------~~~~~~n~~~~~~~~~~~~~~~-~~-~-----g~  142 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLE-TSRDG-F------------LLAQNISAYSLTAVAREAKKLM-TE-G-----GS  142 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCcccc-CCHHH-H------------HHHHhhhHHHHHHHHHHHHHhc-cc-C-----ce
Confidence               58999999986421000 00000 00000 0            0001112233344455555443 22 1     56


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      ++|+++..             +..+......|.++|++...+++.++.++++++|+||+|+||+..++
T Consensus       143 Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  197 (257)
T PRK08594        143 IVTLTYLG-------------GERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL  197 (257)
T ss_pred             EEEEcccC-------------CccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence            66665544             22233444578899999888999999999999999999999987765

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.78  E-value=7.5e-18  Score=144.46  Aligned_cols=152  Identities=18%  Similarity=0.196  Sum_probs=110.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++++|+||||+||||+++++.|+++|++|+++.|+....  ........+. ..++.++.+|++|.+++.++++++|+||
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQ--KKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCH--HHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            468999999999999999999999999999889885321  1111111111 1257889999999999999999999999


Q ss_pred             EcCCCcc--------------chhHHHHHHHHHHh-CCcceeee-cc---ccCCC--------Ccc---------ccCCC
Q 044721           82 STVGHTL--------------LGDQVKIIAAIKEA-GNIKRFFP-SE---FGNDV--------DRV---------HAVEP  125 (263)
Q Consensus        82 ~~a~~~~--------------~~~~~~l~~~~~~~-~~~~~~i~-S~---~g~~~--------~~~---------~~~~~  125 (263)
                      |+|+...              +..+.++++++.+. + ++++++ ||   |+...        ++.         .+..|
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~-~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKS-VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            9998532              22356788888776 5 788874 54   43210        111         12345


Q ss_pred             CchHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          126 AKSAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       126 ~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      .++|+.+|.++|.+++    +.++++++.|+.+..+
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyG  200 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAG  200 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceEC
Confidence            6789999999998875    4589999888877544

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=1e-17  Score=148.06  Aligned_cols=155  Identities=19%  Similarity=0.185  Sum_probs=111.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCc-----ch-------hhhhh---hhccCCcEEEEccCCCH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP-----SK-------SQLLD---HFKKLGVNLVIGDVLNH   67 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~-------~~~~~---~~~~~~~~~~~~D~~~~   67 (263)
                      ++|+||||||+||||++|+++|+++|++|++++|.......     ..       .+.+.   .....++.++.+|++|.
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~  125 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDF  125 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCH
Confidence            56899999999999999999999999999998753211000     00       00111   11123688999999999


Q ss_pred             HHHHHHhc--CcCEEEEcCCCcc------------------chhHHHHHHHHHHhCCcc-eeee-cc---ccCCC---Cc
Q 044721           68 ESLVKAIK--QVDVVISTVGHTL------------------LGDQVKIIAAIKEAGNIK-RFFP-SE---FGNDV---DR  119 (263)
Q Consensus        68 ~~~~~~~~--~~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~~~~-~~i~-S~---~g~~~---~~  119 (263)
                      +++.++++  ++|+|||+|+...                  +.++.++++++.+.+ ++ ++|+ |+   ||...   ++
T Consensus       126 ~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~~~E  204 (442)
T PLN02572        126 EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNIDIEE  204 (442)
T ss_pred             HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCCCcc
Confidence            99999998  5899999996532                  234678899999988 85 7764 43   55321   11


Q ss_pred             -----------c---ccCCCCchHHHHHHHHHHHHH----HcCCCEEEEeccCchhH
Q 044721          120 -----------V---HAVEPAKSAFATKAKIRRAVE----AEGIPYTYGDVLNHGSL  158 (263)
Q Consensus       120 -----------~---~~~~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~~  158 (263)
                                 +   .+.+|.++|+.+|.+.|.+++    ..++++++.|+.|..+.
T Consensus       205 ~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp  261 (442)
T PLN02572        205 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV  261 (442)
T ss_pred             cccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCC
Confidence                       1   245677899999999998884    45999999998886443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.78  E-value=1.4e-17  Score=130.29  Aligned_cols=138  Identities=29%  Similarity=0.394  Sum_probs=112.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGH   86 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~~   86 (263)
                      |+|+||||++|+.+++.|+++|++|+++.|+     +++.+.     ..+++++++|+.|++++.++++++|++|++++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~-----~~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS-----PSKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESS-----GGGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecC-----chhccc-----ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            7999999999999999999999999999999     444322     568999999999999999999999999999986


Q ss_pred             cc--chhHHHHHHHHHHhCCcceeee-ccccCCCCccc----cC-CCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           87 TL--LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVH----AV-EPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        87 ~~--~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~----~~-~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ..  ....+++++++.+++ ++++++ |+.+...+...    .. .....|...|...|+.+++.+++|++.|...+
T Consensus        71 ~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~  146 (183)
T PF13460_consen   71 PPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWI  146 (183)
T ss_dssp             TTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEE
T ss_pred             hcccccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEe
Confidence            54  455789999999999 999885 76654432211    00 11246788999999999999999999986643

...

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.78  E-value=1.2e-17  Score=144.70  Aligned_cols=146  Identities=20%  Similarity=0.185  Sum_probs=111.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+|+|+|||||||||+++++.|.++|++|++++|.....    .   ... .....++.+|++|.+.+..+++++|+|||
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~----~---~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   91 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH----M---SED-MFCHEFHLVDLRVMENCLKVTKGVDHVFN   91 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc----c---ccc-cccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence            578999999999999999999999999999999863211    0   000 11356788999999999999999999999


Q ss_pred             cCCCcc----------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC--------Ccc--ccCCCCchHHHH
Q 044721           83 TVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV--------DRV--HAVEPAKSAFAT  132 (263)
Q Consensus        83 ~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~--------~~~--~~~~~~~~~~~~  132 (263)
                      +|+...                +..+.++++++.+.+ ++++|+ |+   |+...        .++  .+..|.+.|+.+
T Consensus        92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE  170 (370)
T ss_pred             cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence            997531                234688999999999 998874 54   44221        111  256678899999


Q ss_pred             HHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          133 KAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       133 k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      |.+.|+++.    +.++++++.|+.++.+
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyG  199 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYG  199 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccC
Confidence            999999874    4699999999877543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.78  E-value=7.2e-20  Score=151.27  Aligned_cols=182  Identities=16%  Similarity=0.200  Sum_probs=107.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+.    .++.+ ..+.+   .+.++..+.+|++|+++++++++   
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSN----VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            568999999999999999999999999998887653    22221 11222   13467889999999998887765   


Q ss_pred             ----CcCEEEEcCCCccc---hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ----QVDVVISTVGHTLL---GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~---~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                          ++|++|||||....   .....+.+ ....+ +.+.+            ..+....+..++.....+.+..     
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~-~~~~~------------~~n~~~~~~~~~~~~~~~~~~~-----  143 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMR-LKPKG-LNNIY------------TATVNAFVVGAQEAAKRMEKVG-----  143 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhh-CCHHH-HHHHH------------hhhhHHHHHHHHHHHHhhhccC-----
Confidence                58999999975310   00000000 00000 00000            0010122333444333332221     


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .|+++++++..             +.....+...|..+|.+...+.+.++.+++.++++||+|.||+..++.
T Consensus       144 ~g~iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~  202 (260)
T PRK08416        144 GGSIISLSSTG-------------NLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA  202 (260)
T ss_pred             CEEEEEEeccc-------------cccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence            14444443322             111222333556666666667788888999999999999999877654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.78  E-value=5.9e-18  Score=142.62  Aligned_cols=131  Identities=23%  Similarity=0.181  Sum_probs=105.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+||||||+||||+++++.|+++| +|++++|...                   .+.+|++|.+.+.++++  ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKIRPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999 7988887621                   23589999999999998  5899999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccC----CCCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGN----DVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~----~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +|+...               +..+.++++++.+.+ ++.++.|+   |+.    ..+|+.+.+|.+.|+.+|...|+++
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~  139 (299)
T PRK09987         61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKAL  139 (299)
T ss_pred             CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            998764               223578999999998 76444454   433    2355667788899999999999999


Q ss_pred             HHcCCCEEEEeccCch
Q 044721          141 EAEGIPYTYGDVLNHG  156 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~  156 (263)
                      +....++++.|+.+..
T Consensus       140 ~~~~~~~~ilR~~~vy  155 (299)
T PRK09987        140 QEHCAKHLIFRTSWVY  155 (299)
T ss_pred             HHhCCCEEEEecceec
Confidence            8888888888877754

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.4e-19  Score=145.92  Aligned_cols=213  Identities=17%  Similarity=0.110  Sum_probs=128.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++++++|||++|+||+++++.|+++|++|++++|+.     ++.+. .+.+   ...++..+.+|++|+++++++++   
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDA-----DALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence            568999999999999999999999999999999983     33221 1112   13457889999999999887765   


Q ss_pred             CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||+|.......    ..-++...+                     .+....+..++...+.+.++..     |+
T Consensus        81 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~---------------------~n~~~~~~~~~~~~~~~~~~~~-----g~  134 (259)
T PRK06125         81 DIDILVNNAGAIPGGGLDDVDDAAWRAGWE---------------------LKVFGYIDLTRLAYPRMKARGS-----GV  134 (259)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHH---------------------HhhHHHHHHHHHHHHHHHHcCC-----cE
Confidence            69999999996531110    001111111                     1113344456655555443321     34


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++++++..             +..+......|..++.+...+++.++.++.+.+++||+|+||+..++....+.+.....
T Consensus       135 iv~iss~~-------------~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~  201 (259)
T PRK06125        135 IVNVIGAA-------------GENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARA  201 (259)
T ss_pred             EEEecCcc-------------ccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhc
Confidence            44433322             22222333456677777767888899999999999999999987766433221110000


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ...............+.+++.+|+|+|.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~va~  229 (259)
T PRK06125        202 ELGDESRWQELLAGLPLGRPATPEEVAD  229 (259)
T ss_pred             ccCCHHHHHHHhccCCcCCCcCHHHHHH
Confidence            0000000011122446677777877764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.78  E-value=6.3e-19  Score=147.03  Aligned_cols=229  Identities=21%  Similarity=0.214  Sum_probs=128.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     +..+ ..+.+.  +.++..+++|++|++++.++++    
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQ-----EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999983     2222 112221  2357789999999988877664    


Q ss_pred             ---CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           76 ---QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                         ++|++|||||.........-........ ...+.--.. ....+....|....+...+...+.+.+..+     +++
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----g~i  156 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEP-TKTFFDLDE-EGFEFVFDLNLLGTLLPTQVFAKDMVGRKG-----GNI  156 (278)
T ss_pred             HcCCCCEEEECCCCCCccccccccccccccc-ccccccCCH-HHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-----cEE
Confidence               6899999999642110000000000000 000000000 000000111222334445554444433321     444


Q ss_pred             cCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcC
Q 044721          153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEG  232 (263)
Q Consensus       153 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~  232 (263)
                      +++++..             +..+......|..+|.+...+.+.++.+++..++++|+|.||+..++......   ...+
T Consensus       157 i~isS~~-------------~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~---~~~~  220 (278)
T PRK08277        157 INISSMN-------------AFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALL---FNED  220 (278)
T ss_pred             EEEccch-------------hcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhh---cccc
Confidence            4444443             12223344557777777767888889999999999999999987766432211   1111


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCC
Q 044721          233 IPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..............+++|+.+|+|+|.
T Consensus       221 ~~~~~~~~~~~~~~p~~r~~~~~dva~  247 (278)
T PRK08277        221 GSLTERANKILAHTPMGRFGKPEELLG  247 (278)
T ss_pred             ccchhHHHHHhccCCccCCCCHHHHHH
Confidence            000001111122346788888888764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.78  E-value=7.9e-19  Score=145.48  Aligned_cols=221  Identities=16%  Similarity=0.164  Sum_probs=126.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....           ...++..+.+|++|+++++++++       
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----------QHENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999884321           12357788999999998887765       


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ++|++|||||.......   .+....    ..+...+ .....+....|....+...+.....+.+...     ++++++
T Consensus        77 ~id~li~~Ag~~~~~~~---~~~~~~----~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----g~iv~i  143 (266)
T PRK06171         77 RIDGLVNNAGINIPRLL---VDEKDP----AGKYELN-EAAFDKMFNINQKGVFLMSQAVARQMVKQHD-----GVIVNM  143 (266)
T ss_pred             CCCEEEECCcccCCccc---cccccc----cccccCC-HHHHHHHHhhhchhHHHHHHHHHHHHHhcCC-----cEEEEE
Confidence            58999999996421100   000000    0000000 0000000111223344555555544443322     344443


Q ss_pred             hhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcc-hhcHHHH-HHHHH-HcC
Q 044721          156 GSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSA-FVTKAKI-RRAVE-AEG  232 (263)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~-~~~~~~~-~~~~~-~~~  232 (263)
                      ++..             +..+..+...|..+|.+...+.+.++.+++..++++|+|+||... ....... ..... ..+
T Consensus       144 sS~~-------------~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~  210 (266)
T PRK06171        144 SSEA-------------GLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRG  210 (266)
T ss_pred             cccc-------------ccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccC
Confidence            3332             222233445677777777668888889999999999999999764 2211110 00000 001


Q ss_pred             CCeeEEeccccc--ccccCCCCCCCCCCCC
Q 044721          233 IPYTYVASNFFA--GYFLPNLSQPGATAPP  260 (263)
Q Consensus       233 ~~~~~~~~~~~~--~~~~~~~~~~~e~~~~  260 (263)
                      ............  ..+++|+++|+|+|..
T Consensus       211 ~~~~~~~~~~~~~~~~p~~r~~~~~eva~~  240 (266)
T PRK06171        211 ITVEQLRAGYTKTSTIPLGRSGKLSEVADL  240 (266)
T ss_pred             CCHHHHHhhhcccccccCCCCCCHHHhhhh
Confidence            000000011111  3578899999999875

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.4e-18  Score=143.59  Aligned_cols=174  Identities=16%  Similarity=0.157  Sum_probs=112.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+......++..+++|++|.++++++++      
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA-----DNGAAVAASLGERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999983     32222211113467889999999998887765      


Q ss_pred             -CcCEEEEcCCCccch---hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 -QVDVVISTVGHTLLG---DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~---~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                       .+|++|||||.....   ....-++...+.                     |....+..++.....+. +.     .|+
T Consensus        79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~~~~~~~~~~~-~~-----~g~  131 (261)
T PRK08265         79 GRVDILVNLACTYLDDGLASSRADWLAALDV---------------------NLVSAAMLAQAAHPHLA-RG-----GGA  131 (261)
T ss_pred             CCCCEEEECCCCCCCCcCcCCHHHHHHHHhH---------------------hhHHHHHHHHHHHHHHh-cC-----CcE
Confidence             589999999964211   001111111111                     11233444554444333 21     144


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++++++...             ..+..+...|..+|.+...+.+.++.+++..++++|+|+||...++.
T Consensus       132 ii~isS~~~-------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~  187 (261)
T PRK08265        132 IVNFTSISA-------------KFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV  187 (261)
T ss_pred             EEEECchhh-------------ccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence            555444432             11222334566667666667888888999999999999999765543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.4e-18  Score=142.58  Aligned_cols=132  Identities=16%  Similarity=0.194  Sum_probs=92.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ||++++++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++..+.+|++|++++.++++     
T Consensus         1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   75 (277)
T PRK06180          1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS-----EAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT   75 (277)
T ss_pred             CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC-----HHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Confidence            6778899999999999999999999999999999998     333332222223467889999999999888776     


Q ss_pred             --CcCEEEEcCCCccc-------------------hhHHHHHHH----HHHhCCcceee-eccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLL-------------------GDQVKIIAA----IKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-------------------~~~~~l~~~----~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|+||||||....                   ..+.+++++    +.+.+ .++++ +||.+....    ..+...|
T Consensus        76 ~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~----~~~~~~Y  150 (277)
T PRK06180         76 FGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLIT----MPGIGYY  150 (277)
T ss_pred             hCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCC----CCCcchh
Confidence              58999999997531                   112334443    44445 56666 455432211    1235678


Q ss_pred             HHHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVEA  142 (263)
Q Consensus       130 ~~~k~~~e~~~~~  142 (263)
                      ..+|.+++.+++.
T Consensus       151 ~~sK~a~~~~~~~  163 (277)
T PRK06180        151 CGSKFALEGISES  163 (277)
T ss_pred             HHHHHHHHHHHHH
Confidence            8899888876543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.77  E-value=9.9e-20  Score=150.28  Aligned_cols=182  Identities=15%  Similarity=0.116  Sum_probs=118.8

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+  ++||+++++.|+++|++|++..|+....  ...+.++++.  ...+..+++|++|+++++++++   
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG--RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc--hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            57899999986  8999999999999999999887763211  0111122221  1246688999999999987765   


Q ss_pred             ----CcCEEEEcCCCccchh-HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 ----QVDVVISTVGHTLLGD-QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~-~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                          ++|++|||||...... ...+ ....... +.+.+            ..|....+..++.....+ ++.      |
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~-~~~~~~~-~~~~~------------~iN~~~~~~l~~~~~~~m-~~~------g  141 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDF-SATSREG-FARAL------------EISAYSLAPLCKAAKPLM-SEG------G  141 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcc-hhhCHHH-HHHHh------------eeeeHHHHHHHHHHHHHH-hhC------C
Confidence                6899999999652100 0001 1111111 11111            122244556677666554 322      5


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++++++..             +..+..+...|..+|.+...+++.++.++++.+|+||+|+||+..++.
T Consensus       142 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~  198 (258)
T PRK07370        142 SIVTLTYLG-------------GVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLA  198 (258)
T ss_pred             eEEEEeccc-------------cccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCch
Confidence            566555443             223344556789999998889999999999999999999999876653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=1.6e-19  Score=149.20  Aligned_cols=211  Identities=11%  Similarity=0.070  Sum_probs=126.4

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhcc--CCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKK--LGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |++|+++||||++  +||+++++.|+++|++|++.+|+.     ...+.++++..  .....+++|++|+++++++++  
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-----~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-----VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-----HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHH
Confidence            3568999999997  899999999999999999988762     11111222211  123457899999999888775  


Q ss_pred             -----CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 -----QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                           ++|++|||||....... ..+.+ ..... +.            +....|....+..++.....+ ++ +     
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~-~~~~~-~~------------~~~~vn~~~~~~~~~~~~~~m-~~-~-----  139 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVD-TSLEN-FH------------NSLHISCYSLLELSRSAEALM-HD-G-----  139 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCcccc-CCHHH-HH------------HHHHHHHHHHHHHHHHHHhhh-cc-C-----
Confidence                 58999999986421000 00000 00000 00            001112233445566554443 22 1     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      |+++|+++..             +..+......|..+|++...+++.++.|+++++|+||+|+||...++......    
T Consensus       140 G~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----  202 (260)
T PRK06603        140 GSIVTLTYYG-------------AEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG----  202 (260)
T ss_pred             ceEEEEecCc-------------cccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC----
Confidence            5666655433             22223344568888888888999999999999999999999987665321100    


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                        +...  .........+++|+++|+|+|.
T Consensus       203 --~~~~--~~~~~~~~~p~~r~~~pedva~  228 (260)
T PRK06603        203 --DFST--MLKSHAATAPLKRNTTQEDVGG  228 (260)
T ss_pred             --CcHH--HHHHHHhcCCcCCCCCHHHHHH
Confidence              0000  0000112246788888888775

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=1.3e-17  Score=141.99  Aligned_cols=152  Identities=23%  Similarity=0.239  Sum_probs=110.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+++|+||||+|+||+++++.|+++|++|+++.|+....  ++.+.+...  ...+++++.+|++|++++.++++++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   81 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR--KKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV   81 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch--HHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence            468999999999999999999999999999999985421  111111111  1246788999999999999999999999


Q ss_pred             EEcCCCcc--------------chhHHHHHHHHHHh-CCcceeee-ccccC-----C-------CCccccC------CCC
Q 044721           81 ISTVGHTL--------------LGDQVKIIAAIKEA-GNIKRFFP-SEFGN-----D-------VDRVHAV------EPA  126 (263)
Q Consensus        81 v~~a~~~~--------------~~~~~~l~~~~~~~-~~~~~~i~-S~~g~-----~-------~~~~~~~------~~~  126 (263)
                      ||+|+...              +..+.++++++.+. + ++++|+ ||.+.     .       .+++...      .+.
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  160 (322)
T PLN02986         82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK  160 (322)
T ss_pred             EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence            99998642              23457888988875 6 888885 55321     1       1111111      134


Q ss_pred             chHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          127 KSAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      +.|..+|..+|.++.    +.++++++.|..+..+
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~G  195 (322)
T PLN02986        161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICG  195 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeC
Confidence            679999999998774    4689999888776543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.77  E-value=8.1e-19  Score=144.84  Aligned_cols=73  Identities=22%  Similarity=0.325  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+...             ..++..+++|++|+++++++++      
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999998421             1246788999999998887765      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|++|||||..
T Consensus        71 ~~id~li~~Ag~~   83 (258)
T PRK06398         71 GRIDILVNNAGIE   83 (258)
T ss_pred             CCCCEEEECCCCC
Confidence             689999999974

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=1.2e-17  Score=142.09  Aligned_cols=152  Identities=17%  Similarity=0.218  Sum_probs=111.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+|+||||||+||||+++++.|+++|++|++++|+....  .....+....  .+++.++++|++|++++.++++++|+|
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   80 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP--KKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGV   80 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch--hhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEE
Confidence            468999999999999999999999999999999985321  1111111111  246788999999999999999999999


Q ss_pred             EEcCCCcc--------------chhHHHHHHHHHHh-CCcceeee-ccc-----cCC-------CCccccCCC------C
Q 044721           81 ISTVGHTL--------------LGDQVKIIAAIKEA-GNIKRFFP-SEF-----GND-------VDRVHAVEP------A  126 (263)
Q Consensus        81 v~~a~~~~--------------~~~~~~l~~~~~~~-~~~~~~i~-S~~-----g~~-------~~~~~~~~~------~  126 (263)
                      ||+|+...              +..+.++++++.+. + ++++++ |+.     +..       .+++.+.+|      .
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99998532              23457889998887 7 888885 543     211       122222222      2


Q ss_pred             chHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          127 KSAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      +.|+.+|...|++++    +.++++++.|+.+..+
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~G  194 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIG  194 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccC
Confidence            479999999998874    5699999999887543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-18  Score=143.84  Aligned_cols=81  Identities=22%  Similarity=0.371  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+.     ++.+ ..+.+.  +.++..+.+|++|.++++++++    
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP-----AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999984     2222 112222  2347788999999999888875    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|++||++|...
T Consensus        84 ~~~~~d~li~~ag~~~   99 (255)
T PRK07523         84 EIGPIDILVNNAGMQF   99 (255)
T ss_pred             hcCCCCEEEECCCCCC
Confidence               4899999999753

>PRK08643 acetoin reductase; Validated

Probab=99.77  E-value=4.1e-18  Score=140.38  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+..     ..+ ....+.  ..++..+++|++|+++++++++     
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEE-----TAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT   76 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999842     221 112221  2457789999999998887765     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|||||..
T Consensus        77 ~~~id~vi~~ag~~   90 (256)
T PRK08643         77 FGDLNVVVNNAGVA   90 (256)
T ss_pred             cCCCCEEEECCCCC
Confidence              589999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=7.5e-20  Score=151.03  Aligned_cols=181  Identities=13%  Similarity=0.080  Sum_probs=116.6

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+  ++||+++++.|+++|++|++++|+...  .+..+.+ +++  ..+..+++|++|+++++++++   
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHH
Confidence            357899999998  599999999999999999999987421  1111111 121  235678999999999887764   


Q ss_pred             ----CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 ----QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                          ++|++|||||....... ..+.+ ..... +            .+....|....+..++.....+ ++.      |
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~-~~~~~-~------------~~~~~vN~~~~~~~~~~~~p~m-~~~------g  142 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVD-CSREG-F------------ALAMDVSCHSFIRMARLAEPLM-TNG------G  142 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCccc-CCHHH-H------------HHHHhhhhHHHHHHHHHHHHHh-ccC------C
Confidence                58999999996431000 00000 00000 0            0011122244566677666554 322      4


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++++++..             +.........|..+|++...+++.++.++++++|+||+|+||...++.
T Consensus       143 ~Ii~iss~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~  199 (258)
T PRK07533        143 SLLTMSYYG-------------AEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA  199 (258)
T ss_pred             EEEEEeccc-------------cccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence            444444332             222234456788899998889999999999999999999999876654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.76  E-value=2.1e-17  Score=143.89  Aligned_cols=146  Identities=26%  Similarity=0.355  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcc-hhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS-KSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |.++++|+||||||+||+++++.|+++|++|++++|+....... ....... ..++++++.+|++|++++.++++    
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999985432100 0000001 12468899999999999999988    


Q ss_pred             CcCEEEEcCCCcc----------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHH--
Q 044721           76 QVDVVISTVGHTL----------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA--  142 (263)
Q Consensus        76 ~~d~vv~~a~~~~----------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~--  142 (263)
                      ++|+||||++...          ...+.++++++.+.+ ++++|+ |+....       .|...|..+|...|+.++.  
T Consensus       136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~-------~p~~~~~~sK~~~E~~l~~~~  207 (390)
T PLN02657        136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ-------KPLLEFQRAKLKFEAELQALD  207 (390)
T ss_pred             CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc-------CcchHHHHHHHHHHHHHHhcc
Confidence            5999999987532          234679999999999 998885 665432       2355688899999999976  


Q ss_pred             cCCCEEEEeccCc
Q 044721          143 EGIPYTYGDVLNH  155 (263)
Q Consensus       143 ~~~~~~~gr~~n~  155 (263)
                      .+++|++.|..++
T Consensus       208 ~gl~~tIlRp~~~  220 (390)
T PLN02657        208 SDFTYSIVRPTAF  220 (390)
T ss_pred             CCCCEEEEccHHH
Confidence            8999999997664

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.76  E-value=1.7e-17  Score=147.39  Aligned_cols=148  Identities=20%  Similarity=0.239  Sum_probs=113.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh-----------ccCCcEEEEccCCCHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF-----------KKLGVNLVIGDVLNHES   69 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~D~~~~~~   69 (263)
                      +++++++||||+|+||++++++|+++|++|++++|+.     ++.+.+ ..+           ...++.++.+|++|.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~-----ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSA-----QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            4678999999999999999999999999999999984     332211 111           01357889999999999


Q ss_pred             HHHHhcCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceeee-ccccCCCC--ccccCCCCchHHHHH
Q 044721           70 LVKAIKQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVD--RVHAVEPAKSAFATK  133 (263)
Q Consensus        70 ~~~~~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~--~~~~~~~~~~~~~~k  133 (263)
                      +.+++.++|+|||++|...             ..++.++++++.+.+ +++||+ |+.+....  .....+....|...|
T Consensus       153 I~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~sk~~~~~~K  231 (576)
T PLN03209        153 IGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNLFWGVLCWK  231 (576)
T ss_pred             HHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhhHHHHHHHH
Confidence            9999999999999998652             234688999999999 999884 77664211  011122345577789


Q ss_pred             HHHHHHHHHcCCCEEEEeccCc
Q 044721          134 AKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus       134 ~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ..+++.++..|++|++.|...+
T Consensus       232 raaE~~L~~sGIrvTIVRPG~L  253 (576)
T PLN03209        232 RKAEEALIASGLPYTIVRPGGM  253 (576)
T ss_pred             HHHHHHHHHcCCCEEEEECCee
Confidence            9999999999999999886644

>PRK06182 short chain dehydrogenase; Validated

Probab=99.76  E-value=7.2e-18  Score=140.30  Aligned_cols=126  Identities=21%  Similarity=0.249  Sum_probs=87.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+     .++.+.   +...++..+.+|++|+++++++++      
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~l~~---~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARR-----VDKMED---LASLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHH---HHhCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999998     333322   223457889999999999988776      


Q ss_pred             -CcCEEEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|++|||||.....                       .++.+++.+.+.+ .++++. |+.+....    ......|.
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y~  147 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIY----TPLGAWYH  147 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCC----CCCccHhH
Confidence             789999999975311                       1244555555555 566653 44322111    01123466


Q ss_pred             HHHHHHHHHH
Q 044721          131 ATKAKIRRAV  140 (263)
Q Consensus       131 ~~k~~~e~~~  140 (263)
                      .+|.+++.+.
T Consensus       148 ~sKaa~~~~~  157 (273)
T PRK06182        148 ATKFALEGFS  157 (273)
T ss_pred             HHHHHHHHHH
Confidence            6777766643

>PRK08589 short chain dehydrogenase; Validated

Probab=99.76  E-value=3.1e-18  Score=142.43  Aligned_cols=174  Identities=19%  Similarity=0.193  Sum_probs=113.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+ .    ...+..+.+.  ..++..+.+|++++++++++++    
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-E----AVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKE   78 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-H----HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998 2    1222222221  3357889999999998877665    


Q ss_pred             ---CcCEEEEcCCCccc-hh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ---QVDVVISTVGHTLL-GD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                         ++|++|||||.... ..    ....++.+.+.+                     ....+...+.....+.+. +   
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~~~~~-~---  133 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVD---------------------MRGTFLMTKMLLPLMMEQ-G---  133 (272)
T ss_pred             HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHc-C---
Confidence               58999999987531 10    111111111111                     123344455554444332 2   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        |+++++++...             ..+......|..+|.+...+.+.++.++++.+|+||+|+||...++.
T Consensus       134 --g~iv~isS~~~-------------~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  191 (272)
T PRK08589        134 --GSIINTSSFSG-------------QAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL  191 (272)
T ss_pred             --CEEEEeCchhh-------------cCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence              34444444331             11122334577777776668888889999999999999999876553

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=5.1e-19  Score=147.09  Aligned_cols=212  Identities=13%  Similarity=0.099  Sum_probs=125.3

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++|+++||||+  ++||+++++.|+++|++|++++|+...  .++.+.+ +.+  .....+++|++|+++++++++   
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~--~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL--KKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH--HHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHH
Confidence            456899999997  899999999999999999988876211  1222211 121  235578999999999888765   


Q ss_pred             ----CcCEEEEcCCCccchh-HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 ----QVDVVISTVGHTLLGD-QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~-~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                          ++|++|||||...... ...+.+ ..... +.+.            ...|....+..++.....+ ++ +     |
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~-~~~~~-~~~~------------~~vN~~~~~~l~~~~~~~~-~~-~-----g  142 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVD-TSRDN-FTMT------------MDISVYSFTAVAQRAEKLM-TD-G-----G  142 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCccc-CCHHH-HHHH------------HhHHHHHHHHHHHHHHHhc-CC-C-----c
Confidence                5899999999653100 000000 00000 0000            0011123344455544332 22 1     4


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++++++..             +..+......|..+|++...+++.++.++++.+|+||+|+||+..+......      
T Consensus       143 ~Iv~iss~~-------------~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~------  203 (272)
T PRK08159        143 SILTLTYYG-------------AEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI------  203 (272)
T ss_pred             eEEEEeccc-------------cccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC------
Confidence            554444322             2223344567888888888899999999999999999999998766432110      


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .+..  ......-...+++|+.+|+|+|.
T Consensus       204 ~~~~--~~~~~~~~~~p~~r~~~peevA~  230 (272)
T PRK08159        204 GDFR--YILKWNEYNAPLRRTVTIEEVGD  230 (272)
T ss_pred             Ccch--HHHHHHHhCCcccccCCHHHHHH
Confidence            0000  00000001346778888888774

>PLN02427 UDP-apiose/xylose synthase

Probab=99.76  E-value=2.9e-17  Score=143.29  Aligned_cols=147  Identities=21%  Similarity=0.243  Sum_probs=106.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhh----ccCCcEEEEccCCCHHHHHHHhcCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHF----KKLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      +.|+|||||||||||+++++.|+++ |++|++++|+..     +...+...    ...+++++.+|+.|.+++.++++++
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~-----~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   87 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYND-----KIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA   87 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCch-----hhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence            3578999999999999999999998 599999998742     21111111    1236889999999999999999999


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCCC----CccccC-----------
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGNDV----DRVHAV-----------  123 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~~----~~~~~~-----------  123 (263)
                      |+|||+|+...               +..+.++++++.+.+  +++| .|+   ||...    .+..+.           
T Consensus        88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e  165 (386)
T PLN02427         88 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKE  165 (386)
T ss_pred             CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCcccccccccccccccc
Confidence            99999998532               223567888887765  5665 454   44321    111110           


Q ss_pred             -----------CCCchHHHHHHHHHHHHHH----cCCCEEEEeccCch
Q 044721          124 -----------EPAKSAFATKAKIRRAVEA----EGIPYTYGDVLNHG  156 (263)
Q Consensus       124 -----------~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n~~  156 (263)
                                 ++.+.|+.+|..+|+++..    .++++++.|..+..
T Consensus       166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vy  213 (386)
T PLN02427        166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWI  213 (386)
T ss_pred             cccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEeccccee
Confidence                       2345799999999999854    58999999877654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5e-18  Score=140.19  Aligned_cols=74  Identities=24%  Similarity=0.351  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+...     .      ...++..+++|++|+++++++++       
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~-----~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----D------LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh-----h------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998421     1      12357789999999998776553       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|||||..
T Consensus        77 ~id~vi~~ag~~   88 (260)
T PRK06523         77 GVDILVHVLGGS   88 (260)
T ss_pred             CCCEEEECCccc
Confidence            689999999853

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.76  E-value=8.8e-19  Score=143.66  Aligned_cols=177  Identities=16%  Similarity=0.168  Sum_probs=115.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..   ....+.+... +.++..+++|++++++++++++      
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP---SETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH---HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999998731   1111122222 3457889999999999886664      


Q ss_pred             -CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||.......    ..-.+...+                     .|....+...+.....+.++..    .+
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~---------------------~n~~~~~~~~~~~~~~~~~~~~----~g  133 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMN---------------------VNLKSVFFLTQAAAKHFLKQGR----GG  133 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHh---------------------hhhHHHHHHHHHHHHHHHhcCC----Ce
Confidence             58999999997542110    001111111                     1113345556655555544321    14


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++++.++....             .+......|..+|.+...+.+.++.++.++++++|+|+||+..++.
T Consensus       134 ~iv~~sS~~~~-------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  190 (248)
T TIGR01832       134 KIINIASMLSF-------------QGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN  190 (248)
T ss_pred             EEEEEecHHhc-------------cCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence            55554444321             1112233577777777778888999999999999999999876654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.5e-18  Score=142.68  Aligned_cols=175  Identities=12%  Similarity=0.107  Sum_probs=111.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|++.|++|++..++.    .++.+ ....+.  +..+..+.+|+++.++++.+++  
T Consensus         1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (252)
T PRK12747          1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR----KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL   76 (252)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHH
Confidence            67889999999999999999999999999998875432    11211 111221  2346778899999877654332  


Q ss_pred             -----------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           76 -----------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        76 -----------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                                 ++|++|||||......    ...-++.+.+.                     |....+...+...+.+.
T Consensus        77 ~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~v---------------------N~~~~~~l~~~~~~~~~  135 (252)
T PRK12747         77 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSV---------------------NAKAPFFIIQQALSRLR  135 (252)
T ss_pred             HHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH---------------------hhhHHHHHHHHHHHHhh
Confidence                       6899999999643110    11111111111                     11334444555444432


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      + .      |+++++++..             +..+..+...|..+|.+...+++.++.+++.+++++|+|+||+..++.
T Consensus       136 ~-~------g~iv~isS~~-------------~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~  195 (252)
T PRK12747        136 D-N------SRIINISSAA-------------TRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM  195 (252)
T ss_pred             c-C------CeEEEECCcc-------------cccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence            2 1      4555544443             222233445677777777778888889999999999999999876654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=4.3e-17  Score=139.89  Aligned_cols=151  Identities=17%  Similarity=0.258  Sum_probs=111.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh---hccCCcEEEEccCCCHHHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH---FKKLGVNLVIGDVLNHESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~--~~   77 (263)
                      ++|++|||||+||||++++++|+++|++|++++|++........+.+..   ....++.++.+|++|.+++.++++  ++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998753211111211110   012357889999999999999887  47


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcc-----eeee-cc---ccCC---CCccccCCCCchHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIK-----RFFP-SE---FGND---VDRVHAVEPAKSAF  130 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~-----~~i~-S~---~g~~---~~~~~~~~~~~~~~  130 (263)
                      |+|||+|+...               +.++.++++++.+.+ ++     ++|+ |+   ||..   .+++.+..|.+.|+
T Consensus        85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~  163 (340)
T PLN02653         85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA  163 (340)
T ss_pred             CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence            99999999743               234578899998888 65     6653 43   5542   34556677888999


Q ss_pred             HHHHHHHHHHH----HcCCCEEEEeccC
Q 044721          131 ATKAKIRRAVE----AEGIPYTYGDVLN  154 (263)
Q Consensus       131 ~~k~~~e~~~~----~~~~~~~~gr~~n  154 (263)
                      .+|.++|.+++    +.+++++.+++.|
T Consensus       164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~  191 (340)
T PLN02653        164 VAKVAAHWYTVNYREAYGLFACNGILFN  191 (340)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEeeecc
Confidence            99999999984    3477777777766

>PLN02650 dihydroflavonol-4-reductase

Probab=99.76  E-value=3.4e-17  Score=141.10  Aligned_cols=153  Identities=18%  Similarity=0.188  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ..++||||||+||||++++++|+++|++|++++|+....  ..........  ..++.++.+|++|.+.+.++++++|+|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V   81 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV--KKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV   81 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh--HHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence            468999999999999999999999999999999984321  1111110111  124788999999999999999999999


Q ss_pred             EEcCCCcc--------------chhHHHHHHHHHHhCCcceeee-ccccC---C------CCccc---------cCCCCc
Q 044721           81 ISTVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SEFGN---D------VDRVH---------AVEPAK  127 (263)
Q Consensus        81 v~~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~---~------~~~~~---------~~~~~~  127 (263)
                      ||+|+...              +..+.++++++.+.+.++++|+ ||.+.   .      .++..         +..+.+
T Consensus        82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            99998542              2245788999988653577774 54321   1      11111         012345


Q ss_pred             hHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          128 SAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       128 ~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      +|+.+|..+|.+++    +.++++++.|+.+..+
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G  195 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVG  195 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceEC
Confidence            79999999998874    4589999888777543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.75  E-value=3e-18  Score=141.08  Aligned_cols=80  Identities=16%  Similarity=0.273  Sum_probs=63.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .+++++||||+|+||++++++|+++|++|++++|+.     .+.+ ..+.+.  ..++..+.+|++|+++++++++    
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA-----ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH-----HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999983     2222 222222  2356778999999998887764    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++|||+|..
T Consensus        83 ~~~~id~vi~~ag~~   97 (254)
T PRK08085         83 DIGPIDVLINNAGIQ   97 (254)
T ss_pred             hcCCCCEEEECCCcC
Confidence               589999999864

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=4.5e-17  Score=131.07  Aligned_cols=183  Identities=21%  Similarity=0.262  Sum_probs=134.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhc--CcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIK--QVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~d~   79 (263)
                      |++|||||.||||+++++.+++...  +|++++.=.-   ....+.+..+. .++..++++|+.|.+.+.++|+  ++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY---Agn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY---AGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc---cCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            6899999999999999999999874  3566554321   12222233332 4689999999999999999998  6999


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcc-eee-ec---cccCCC------CccccCCCCchHHHHH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIK-RFF-PS---EFGNDV------DRVHAVEPAKSAFATK  133 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~-~~i-~S---~~g~~~------~~~~~~~~~~~~~~~k  133 (263)
                      |+|.|+..+               +-++.+|++++.+.. .+ +++ +|   +||...      .|..+.+|.++|.+||
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASK  156 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASK  156 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhh
Confidence            999999887               345789999999997 43 455 45   365432      4678899999999999


Q ss_pred             HHHHHHHH----HcCCCEEEEeccCchh------------HHHHhcccceEEEecCc-----ccchhHHHHHHHHHhcC
Q 044721          134 AKIRRAVE----AEGIPYTYGDVLNHGS------------LVKAIKQVDVVISTVGH-----TLLADQVKIIAAIKEAG  191 (263)
Q Consensus       134 ~~~e~~~~----~~~~~~~~gr~~n~~~------------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  191 (263)
                      ++.+.+++    ..|+|.++.|..|-.+            +...+.+....++..|.     ....+.+..+......|
T Consensus       157 AasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg  235 (340)
T COG1088         157 AASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG  235 (340)
T ss_pred             hhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC
Confidence            99998885    6799999999888432            34455566666666554     24556666555555543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.8e-18  Score=139.49  Aligned_cols=127  Identities=21%  Similarity=0.245  Sum_probs=92.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |+++++++||||+|+||++++++|+++|++|++++|+...     .+   .  ..+++++++|++|+++++++++     
T Consensus         1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~-----~~---~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   70 (270)
T PRK06179          1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR-----AA---P--IPGVELLELDVTDDASVQAAVDEVIAR   70 (270)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh-----cc---c--cCCCeeEEeecCCHHHHHHHHHHHHHh
Confidence            7778899999999999999999999999999999998432     11   0  2357889999999999988876     


Q ss_pred             --CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|++|||||....                   ..    .+.+++.+.+.+ .++++. |+......    ......|
T Consensus        71 ~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~~Y  145 (270)
T PRK06179         71 AGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLP----APYMALY  145 (270)
T ss_pred             CCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCC----CCCccHH
Confidence              47999999997531                   11    233444456667 777774 54322111    1124578


Q ss_pred             HHHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVEA  142 (263)
Q Consensus       130 ~~~k~~~e~~~~~  142 (263)
                      ..+|.+++.+.+.
T Consensus       146 ~~sK~a~~~~~~~  158 (270)
T PRK06179        146 AASKHAVEGYSES  158 (270)
T ss_pred             HHHHHHHHHHHHH
Confidence            8899988877643

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.75  E-value=8.3e-18  Score=138.81  Aligned_cols=134  Identities=18%  Similarity=0.234  Sum_probs=88.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     .+.+.. ..+.  +.++..+.+|++|+++++++++    
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA-----EELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999983     332211 1121  2357789999999999876654    


Q ss_pred             ---CcCEEEEcCCCcc-------------------chhHHHHHHHHHHh-----CCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ---QVDVVISTVGHTL-------------------LGDQVKIIAAIKEA-----GNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ---~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~-----~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                         ++|++||+||...                   .....++++++...     + .+++++ |+............+..
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~  164 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTI  164 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcc
Confidence               5899999998642                   11234555544332     4 556663 54322111111112346


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|++++.+++.
T Consensus       165 ~Y~~sKa~~~~~~~~  179 (259)
T PRK08213        165 AYNTSKGAVINFTRA  179 (259)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            788888888775543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.75  E-value=6.5e-17  Score=139.25  Aligned_cols=152  Identities=20%  Similarity=0.288  Sum_probs=111.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   79 (263)
                      +++|+|+||||+||||+++++.|+++|++|++++|+.... ....+.+.  ...++..+.+|++|.+++.+++++  +|+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS-PNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFKPEI   78 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc-hhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence            4578999999999999999999999999999999885421 11111111  123577889999999999999884  699


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCccccCCCCchHHHHHHH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~~~~~~~~~~~~~k~~  135 (263)
                      |||+|+...               +..+.++++++...+.++++++ ||   |+..     .++..+..|.++|+.+|.+
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~  158 (349)
T TIGR02622        79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKAC  158 (349)
T ss_pred             EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHH
Confidence            999998542               2346788888876642567774 54   4421     2334455678899999999


Q ss_pred             HHHHHHH-----------cCCCEEEEeccCch
Q 044721          136 IRRAVEA-----------EGIPYTYGDVLNHG  156 (263)
Q Consensus       136 ~e~~~~~-----------~~~~~~~gr~~n~~  156 (263)
                      .|.+++.           .++++++.|+.+..
T Consensus       159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vy  190 (349)
T TIGR02622       159 AELVIASYRSSFFGVANFHGIKIASARAGNVI  190 (349)
T ss_pred             HHHHHHHHHHHhhcccccCCCcEEEEccCccc
Confidence            9988854           27888888877754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-18  Score=141.63  Aligned_cols=81  Identities=15%  Similarity=0.168  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      .+++++||||+|+||+++++.|+++|++|++++|+.     +..+.+......++..+.+|++|+++++++++       
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP-----ARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH-----HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999983     33322222123457889999999999888776       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|++|||+|...
T Consensus        80 ~id~li~~ag~~~   92 (257)
T PRK07067         80 GIDILFNNAALFD   92 (257)
T ss_pred             CCCEEEECCCcCC
Confidence            5899999998653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.75  E-value=6.8e-17  Score=139.22  Aligned_cols=153  Identities=20%  Similarity=0.217  Sum_probs=112.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ||++++|+||||+|+||+++++.|+++|++|++++|..... ..........   ...++.++.+|++|++++.++++  
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSS-EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcch-HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            45678999999999999999999999999999998753221 1111111111   12457889999999999999886  


Q ss_pred             CcCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHH
Q 044721           76 QVDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFAT  132 (263)
Q Consensus        76 ~~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~  132 (263)
                      ++|+|||+|+...               +..+.++++++.+.+ ++++++ |+   |+..    .+++.+..+...|+.+
T Consensus        81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~s  159 (352)
T PLN02240         81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRT  159 (352)
T ss_pred             CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHH
Confidence            6899999998642               234578899998888 888874 54   3322    2455667778899999


Q ss_pred             HHHHHHHHHH-----cCCCEEEEeccCc
Q 044721          133 KAKIRRAVEA-----EGIPYTYGDVLNH  155 (263)
Q Consensus       133 k~~~e~~~~~-----~~~~~~~gr~~n~  155 (263)
                      |.++|++++.     .+++.++.|+.|.
T Consensus       160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v  187 (352)
T PLN02240        160 KLFIEEICRDIHASDPEWKIILLRYFNP  187 (352)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEeecCc
Confidence            9999999853     3567777886554

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.75  E-value=4.5e-17  Score=138.85  Aligned_cols=153  Identities=19%  Similarity=0.200  Sum_probs=109.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+|+++||||+||||+++++.|+++|++|++++|+..... ......... ...++.++.+|++|.++++++++++|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRK-KTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchh-hHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            3689999999999999999999999999999888854211 111000000 02357889999999999999999999999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHh-CCcceeee-ccc---cCC---------CCccccCCC------C
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEA-GNIKRFFP-SEF---GND---------VDRVHAVEP------A  126 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~-~~~~~~i~-S~~---g~~---------~~~~~~~~~------~  126 (263)
                      |+||...               +..+.++++++.+. + ++++|+ ||.   +..         .+|+.+.+|      .
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  161 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK  161 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence            9998642               22357888888775 5 677774 542   211         123333333      3


Q ss_pred             chHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          127 KSAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      +.|+.+|..+|+++.    +.++++++.|+.+..+
T Consensus       162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyG  196 (325)
T PLN02989        162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTG  196 (325)
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeC
Confidence            579999999998875    4589999888777544

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6e-18  Score=139.95  Aligned_cols=81  Identities=22%  Similarity=0.299  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+.     ...+....+.  ..++..+.+|++++++++++++    
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISP-----EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999883     2222222221  3457788999999999888765    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++|||+|..
T Consensus        79 ~~~~id~vi~~ag~~   93 (263)
T PRK08226         79 KEGRIDILVNNAGVC   93 (263)
T ss_pred             HcCCCCEEEECCCcC
Confidence               589999999964

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-17  Score=136.95  Aligned_cols=80  Identities=15%  Similarity=0.232  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+.  ..++.++.+|++|+++++++++    
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ-----AELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999984     2322 112221  2457789999999998887775    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++|||||..
T Consensus        80 ~~~~id~li~~ag~~   94 (254)
T PRK07478         80 RFGGLDIAFNNAGTL   94 (254)
T ss_pred             hcCCCCEEEECCCCC
Confidence               689999999964

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.2e-17  Score=138.71  Aligned_cols=81  Identities=19%  Similarity=0.279  Sum_probs=65.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.     ++.+. .+.+.  ..++.++.+|++|.+++.++++   
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~-----~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE-----DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999983     33221 12221  2356789999999999888776   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|++|||||..
T Consensus       113 ~~~g~id~li~~AG~~  128 (293)
T PRK05866        113 KRIGGVDILINNAGRS  128 (293)
T ss_pred             HHcCCCCEEEECCCCC
Confidence                789999999875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.75  E-value=2.5e-18  Score=141.53  Aligned_cols=208  Identities=13%  Similarity=0.129  Sum_probs=123.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++++++|||++|+||++++++|++.|++|++++|+..   .+..+.+... ..++..+++|++|.++++++++      
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP---TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch---HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            34689999999999999999999999999998876531   1111222222 3457788999999999888775      


Q ss_pred             -CcCEEEEcCCCccchhHH----HHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGDQV----KIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~~----~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||........    .-++...+                     .|....+...+.....+.++..    -|
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~---------------------~N~~~~~~l~~~~~~~~~~~~~----~g  138 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMN---------------------LNIKSVFFMSQAAAKHFIAQGN----GG  138 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHh---------------------hhhHHHHHHHHHHHHHHHhCCC----Ce
Confidence             589999999975311100    00111111                     1112233344444444433211    14


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++++++....             .+......|..+|.+...+.+.++.+++..++++|+|+||+..++.......   .
T Consensus       139 ~iv~isS~~~~-------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~---~  202 (253)
T PRK08993        139 KIINIASMLSF-------------QGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA---D  202 (253)
T ss_pred             EEEEECchhhc-------------cCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc---c
Confidence            44444443311             1111223566666666667888889999999999999999887654322110   0


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .+.     ........+.+|+.+|+|+|+
T Consensus       203 ~~~-----~~~~~~~~p~~r~~~p~eva~  226 (253)
T PRK08993        203 EQR-----SAEILDRIPAGRWGLPSDLMG  226 (253)
T ss_pred             hHH-----HHHHHhcCCCCCCcCHHHHHH
Confidence            000     001112345678888888764

>PRK06196 oxidoreductase; Provisional

Probab=99.75  E-value=2.1e-17  Score=140.37  Aligned_cols=130  Identities=19%  Similarity=0.167  Sum_probs=88.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     .++.+ ....+  .++.++++|++|.++++++++      
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~-----~~~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR-----PDVAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            56899999999999999999999999999999998     33332 12222  247889999999999887764      


Q ss_pred             -CcCEEEEcCCCcc-----------------ch----hHHHHHHHHHHhCCcceee-eccccCCCC-----c---cccCC
Q 044721           76 -QVDVVISTVGHTL-----------------LG----DQVKIIAAIKEAGNIKRFF-PSEFGNDVD-----R---VHAVE  124 (263)
Q Consensus        76 -~~d~vv~~a~~~~-----------------~~----~~~~l~~~~~~~~~~~~~i-~S~~g~~~~-----~---~~~~~  124 (263)
                       ++|+||||||...                 +.    .++.+++.+.+.+ ..++| +||.+....     .   ..+..
T Consensus        98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  176 (315)
T PRK06196         98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYD  176 (315)
T ss_pred             CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCC
Confidence             6899999999642                 01    1345556666665 56776 455432110     0   01122


Q ss_pred             CCchHHHHHHHHHHHH
Q 044721          125 PAKSAFATKAKIRRAV  140 (263)
Q Consensus       125 ~~~~~~~~k~~~e~~~  140 (263)
                      +...|..+|.+.+.+.
T Consensus       177 ~~~~Y~~SK~a~~~~~  192 (315)
T PRK06196        177 KWLAYGQSKTANALFA  192 (315)
T ss_pred             hHHHHHHHHHHHHHHH
Confidence            3456777887776644

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=2e-17  Score=135.85  Aligned_cols=81  Identities=19%  Similarity=0.215  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++..++.    ..+.+.+......++..+++|++|+++++++++      
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQS----EDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999998876642    222221111113467889999999998888775      


Q ss_pred             -C-cCEEEEcCCC
Q 044721           76 -Q-VDVVISTVGH   86 (263)
Q Consensus        76 -~-~d~vv~~a~~   86 (263)
                       + +|++|||||.
T Consensus        79 g~~id~li~~ag~   91 (253)
T PRK08642         79 GKPITTVVNNALA   91 (253)
T ss_pred             CCCCeEEEECCCc
Confidence             2 8999999985

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=1.7e-18  Score=143.12  Aligned_cols=213  Identities=12%  Similarity=0.088  Sum_probs=129.4

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||  +++||+++++.|+++|++|++++|....  .++.+.+ +.+  .....+.+|++|+++++++++   
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAEF--GSDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHHHHHHHhc--CCcceeeccCCCHHHHHHHHHHHH
Confidence            35689999996  6899999999999999999988764211  2222211 222  223468899999999987774   


Q ss_pred             ----CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 ----QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                          ++|++|||||....... ..+++...... ++..            ...|....+..+|..+..+ ++.      |
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~-~~~~------------~~iN~~~~~~l~~~~lp~m-~~~------g  139 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSREN-FRIA------------HDISAYSFPALAKAALPML-SDD------A  139 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHH-HHHH------------HHhhhHHHHHHHHHHHHhc-CCC------c
Confidence                68999999997531100 00011011111 1111            1122244556677766544 221      5


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|+++..             +..+..+...|..+|.+...+++.++.++++++|+||+|+||+..+.....+..   .
T Consensus       140 ~Ii~iss~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~---~  203 (260)
T PRK06997        140 SLLTLSYLG-------------AERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD---F  203 (260)
T ss_pred             eEEEEeccc-------------cccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc---h
Confidence            555554433             222334455789999999889999999999999999999999876542211000   0


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..     .........+++|+++|+|++.
T Consensus       204 ~~-----~~~~~~~~~p~~r~~~pedva~  227 (260)
T PRK06997        204 GK-----ILDFVESNAPLRRNVTIEEVGN  227 (260)
T ss_pred             hh-----HHHHHHhcCcccccCCHHHHHH
Confidence            00     0001112346788888888765

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.74  E-value=9.9e-17  Score=138.40  Aligned_cols=149  Identities=21%  Similarity=0.300  Sum_probs=105.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      |++|||||||||||+++++.|+++|++++++.++....  .....+... ...++.++.+|++|.++++++++  ++|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA--GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc--cchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            46899999999999999999999998865544432110  011111111 12357788999999999999998  49999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHh---------CCcceeee-cc---ccCC------CCccccCCCC
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEA---------GNIKRFFP-SE---FGND------VDRVHAVEPA  126 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~---------~~~~~~i~-S~---~g~~------~~~~~~~~~~  126 (263)
                      ||+||...               +..+.++++++.+.         + ++++++ |+   |+..      .++..+..|.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCCCCC
Confidence            99998753               23467888888762         4 567764 54   4421      2334455678


Q ss_pred             chHHHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          127 KSAFATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +.|+.+|.++|.+++    +.++++++.|..+.
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v  190 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNN  190 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeee
Confidence            899999999998884    46899998887664

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.74  E-value=6e-17  Score=132.13  Aligned_cols=151  Identities=21%  Similarity=0.254  Sum_probs=117.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhcc--CCcEEEEccCCCHHHHHHHhc--CcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKK--LGVNLVIGDVLNHESLVKAIK--QVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~--~~d~   79 (263)
                      .++||||||+||||+|.+.+|+++|+.|++++-=.... .+.....+.+..  .++.++++|+.|.+.++++|+  ++|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~-~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY-LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc-hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence            57899999999999999999999999999988432221 333333444433  679999999999999999998  7899


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcceeeec----cccCCC----CccccCC-CCchHHHHHHH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPS----EFGNDV----DRVHAVE-PAKSAFATKAK  135 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S----~~g~~~----~~~~~~~-~~~~~~~~k~~  135 (263)
                      |+|.|+...               ..++.++++.+++.+ ++.+++|    .||.+.    .+..+.. |.++|+.+|..
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~  159 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKA  159 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHH
Confidence            999998775               345789999999999 9999863    366543    4444554 88999999999


Q ss_pred             HHHHHHHc----CCCEEEEeccCch
Q 044721          136 IRRAVEAE----GIPYTYGDVLNHG  156 (263)
Q Consensus       136 ~e~~~~~~----~~~~~~gr~~n~~  156 (263)
                      +|+.+...    ++..+..|++|..
T Consensus       160 iE~i~~d~~~~~~~~~~~LRyfn~~  184 (343)
T KOG1371|consen  160 IEEIIHDYNKAYGWKVTGLRYFNVI  184 (343)
T ss_pred             HHHHHHhhhccccceEEEEEecccc
Confidence            99999643    4445567777743

>PLN02686 cinnamoyl-CoA reductase

Probab=99.74  E-value=5.9e-17  Score=140.25  Aligned_cols=150  Identities=17%  Similarity=0.175  Sum_probs=110.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--------cCCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--------KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~   73 (263)
                      +++|+||||||+||||+++++.|+++|++|+++.|+..     ..+.+..+.        ..++.++.+|++|.+++.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~-----~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE-----DKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            35789999999999999999999999999999888732     222112210        12478899999999999999


Q ss_pred             hcCcCEEEEcCCCcc---------------chhHHHHHHHHHHh-CCcceeee-ccc-----cCC--------CCcc---
Q 044721           74 IKQVDVVISTVGHTL---------------LGDQVKIIAAIKEA-GNIKRFFP-SEF-----GND--------VDRV---  120 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~---------------~~~~~~l~~~~~~~-~~~~~~i~-S~~-----g~~--------~~~~---  120 (263)
                      ++++|.+||+++...               +..+.++++++.+. + ++++|+ |+.     +..        .++.   
T Consensus       126 i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~  204 (367)
T PLN02686        126 FDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWS  204 (367)
T ss_pred             HHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCC
Confidence            999999999987532               23467899999886 7 898885 542     210        1111   


Q ss_pred             ---ccCCCCchHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          121 ---HAVEPAKSAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       121 ---~~~~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                         .+..|.+.|+.+|..+|++++    ..++++++.|+.+..+
T Consensus       205 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyG  248 (367)
T PLN02686        205 DESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTG  248 (367)
T ss_pred             ChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceEC
Confidence               122345679999999999984    4589888888776533

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6.8e-18  Score=142.47  Aligned_cols=189  Identities=14%  Similarity=0.062  Sum_probs=118.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCC-----cchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-----PSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ++|+++||||+++||+++++.|++.|++|++++|+.....     +++.+ ..+.+.  +.++..+++|++|++++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4689999999999999999999999999999999843210     11111 111221  234678899999999888776


Q ss_pred             c-------CcCEEEEcC-CCccchh-HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           75 K-------QVDVVISTV-GHTLLGD-QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        75 ~-------~~d~vv~~a-~~~~~~~-~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                      +       ++|++|||| |...... ...+.+.-.+.  ..            +....+....+..+|..+..+.++.+ 
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~--~~------------~~~~~n~~~~~~~~~~~lp~m~~~~~-  151 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDK--GL------------RMLRLAIDTHLITSHFALPLLIRRPG-  151 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHH--HH------------HHHHHhhHHHHHHHHHHHHHhhhCCC-
Confidence            4       689999999 6321000 00000000000  00            00011113345556766655544432 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                          |+++|+++.....          ..........|..+|.+...+++.++.++++.+||||+|+||+..++.
T Consensus       152 ----g~IV~isS~~~~~----------~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        152 ----GLVVEITDGTAEY----------NATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM  212 (305)
T ss_pred             ----cEEEEECCccccc----------cCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence                6666665533110          001112345689999998889999999999999999999999876654

>PRK07985 oxidoreductase; Provisional

Probab=99.74  E-value=1.8e-18  Score=145.42  Aligned_cols=175  Identities=15%  Similarity=0.117  Sum_probs=104.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-h--ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++.+|+...   +..+.+.. +  .+.++..+.+|++|++++.++++   
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE---EDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcch---hhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            345899999999999999999999999999988775321   11111111 1  13357788999999988877654   


Q ss_pred             ----CcCEEEEcCCCccc-hh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ----QVDVVISTVGHTLL-GD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                          ++|++|||||.... ..    ...-++...+.+                     ....+...+.....+ ++ +  
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~m-~~-~--  178 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN---------------------VFALFWLTQEAIPLL-PK-G--  178 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHhh-hc-C--
Confidence                58999999986420 00    000011111111                     012223333333222 11 1  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                         ++++++++...             ..+..+...|..+|.+...+.+.++.++++.++++|+|+||+..++.
T Consensus       179 ---g~iv~iSS~~~-------------~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~  236 (294)
T PRK07985        179 ---ASIITTSSIQA-------------YQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_pred             ---CEEEEECCchh-------------ccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence               33333333321             11122233455555555557777888899999999999999876653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.74  E-value=1.1e-16  Score=137.18  Aligned_cols=148  Identities=20%  Similarity=0.337  Sum_probs=108.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+++||||+|+||+++++.|+++|++|++++|..... ......+....+.++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCch-HhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            5899999999999999999999999999988753221 111111122223457788999999999999886  6999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccC-CCCchHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAV-EPAKSAFATKAKIRR  138 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~-~~~~~~~~~k~~~e~  138 (263)
                      +|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+. +|...|..+|.++|+
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~  158 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence            998653               124578899999998 888884 54   3322    2333343 567889999999999


Q ss_pred             HHHH-----cCCCEEEEeccC
Q 044721          139 AVEA-----EGIPYTYGDVLN  154 (263)
Q Consensus       139 ~~~~-----~~~~~~~gr~~n  154 (263)
                      ++++     .++++++.|+.+
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~  179 (338)
T PRK10675        159 ILTDLQKAQPDWSIALLRYFN  179 (338)
T ss_pred             HHHHHHHhcCCCcEEEEEeee
Confidence            9864     267788888654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.4e-18  Score=141.54  Aligned_cols=83  Identities=19%  Similarity=0.216  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.... +...+.+... ..++..+.+|++|.+++.++++       
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG-EETVALIREA-GGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999984321 0111111111 3457889999999998887765       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|||+|..
T Consensus        84 ~id~li~~ag~~   95 (253)
T PRK06172         84 RLDYAFNNAGIE   95 (253)
T ss_pred             CCCEEEECCCCC
Confidence            569999999864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.74  E-value=4e-17  Score=134.47  Aligned_cols=131  Identities=17%  Similarity=0.149  Sum_probs=93.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ||++++++||||+|+||+++++.|+++|++|++++|++.     +.+ ....+  ...++..+.+|++|+++++++++  
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   75 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDE-----AAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYA   75 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH-----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            678899999999999999999999999999999999843     222 11222  13467889999999999888776  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                           ++|+|||+++....                   ..    .+.+++.+.+.+ .+++++ |+.....    +..+.
T Consensus        76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~----~~~~~  150 (258)
T PRK12429         76 VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLV----GSAGK  150 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhcc----CCCCc
Confidence                 58999999986531                   11    345556666666 777774 4432211    12235


Q ss_pred             chHHHHHHHHHHHHH
Q 044721          127 KSAFATKAKIRRAVE  141 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~  141 (263)
                      ..|..+|.+.+.+.+
T Consensus       151 ~~y~~~k~a~~~~~~  165 (258)
T PRK12429        151 AAYVSAKHGLIGLTK  165 (258)
T ss_pred             chhHHHHHHHHHHHH
Confidence            678888887776554

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.73  E-value=1.1e-16  Score=137.62  Aligned_cols=143  Identities=20%  Similarity=0.325  Sum_probs=105.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC-CHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL-NHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vv   81 (263)
                      ||+|+||||+||||++|++.|+++ |++|++++|+.     .+..  ......+++++.+|+. +.+.+.++++++|+||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~-----~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi   73 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT-----DRLG--DLVNHPRMHFFEGDITINKEWIEYHVKKCDVIL   73 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH-----HHHH--HhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence            368999999999999999999986 69999999863     2211  1111246889999998 7788888999999999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCCC----Cccc-c------CCCCchHHH
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGNDV----DRVH-A------VEPAKSAFA  131 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~~----~~~~-~------~~~~~~~~~  131 (263)
                      |+|+...               +..+.++++++.+.+ . ++| .|+   ||...    +++. +      .+|.+.|+.
T Consensus        74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~-~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~  151 (347)
T PRK11908         74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-K-HLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC  151 (347)
T ss_pred             ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-C-eEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH
Confidence            9998542               234678999999887 4 555 454   44321    1221 1      134568999


Q ss_pred             HHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          132 TKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       132 ~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +|.++|++++    +.++++++.|+.++
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~ilR~~~v  179 (347)
T PRK11908        152 SKQLMDRVIWAYGMEEGLNFTLFRPFNW  179 (347)
T ss_pred             HHHHHHHHHHHHHHHcCCCeEEEeeeee
Confidence            9999998885    46899999987664

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.7e-17  Score=133.41  Aligned_cols=138  Identities=14%  Similarity=0.097  Sum_probs=91.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+....   ..+....+.  +.++..+.+|++|++++.++++    
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR---ANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5568999999999999999999999999999999874211   111111111  3457789999999999887765    


Q ss_pred             ---CcCEEEEcCCCcc-------------chhHHHHHHHHHHhC-Ccceee-eccccCCCCcc-ccCCCCchHHHHHHHH
Q 044721           76 ---QVDVVISTVGHTL-------------LGDQVKIIAAIKEAG-NIKRFF-PSEFGNDVDRV-HAVEPAKSAFATKAKI  136 (263)
Q Consensus        76 ---~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~-~~~~~i-~S~~g~~~~~~-~~~~~~~~~~~~k~~~  136 (263)
                         ++|++|||||...             ...+.++++++...- ...+++ +|+........ .+......|..+|.++
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~  160 (248)
T PRK07806         81 EFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAG  160 (248)
T ss_pred             hCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHH
Confidence               5899999998642             234567777776542 023555 45533221111 1111145788899998


Q ss_pred             HHHHHH
Q 044721          137 RRAVEA  142 (263)
Q Consensus       137 e~~~~~  142 (263)
                      |.+++.
T Consensus       161 e~~~~~  166 (248)
T PRK07806        161 EDALRA  166 (248)
T ss_pred             HHHHHH
Confidence            886654

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.6e-17  Score=139.08  Aligned_cols=179  Identities=17%  Similarity=0.085  Sum_probs=121.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCC----CCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHh
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      +++++++||||+++||+++++.|+++|++|++++|+...    ...++.+ ..+++.  +.++..+.+|++|++++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            457899999999999999999999999999998876410    0011221 222221  335778899999999887766


Q ss_pred             c-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           75 K-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        75 ~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                      +       ++|++|||||......    ...-++...+                     .|....+..+|.....+.++.
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~---------------------~N~~g~~~l~~~~~~~~~~~~  142 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIA---------------------VHLKGHFATLRHAAAYWRAES  142 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH---------------------HccHHHHHHHHHHHHHHHHhc
Confidence            4       6899999999753111    0111111111                     222456677887777665432


Q ss_pred             CC-CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCC
Q 044721          144 GI-PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPA  214 (263)
Q Consensus       144 ~~-~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg  214 (263)
                      .- .-..|+++|+++..             +..+..+...|..+|.+...+++.++.++++.+|+||+|+||
T Consensus       143 ~~~~~~~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg  201 (286)
T PRK07791        143 KAGRAVDARIINTSSGA-------------GLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA  201 (286)
T ss_pred             ccCCCCCcEEEEeCchh-------------hCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence            10 00125666665554             233344567899999999889999999999999999999999

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3e-17  Score=136.72  Aligned_cols=130  Identities=15%  Similarity=0.176  Sum_probs=89.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+     .+..+.+.......+..+++|++|+++++++++      
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARD-----TATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999998     333332222223457788999999998877665      


Q ss_pred             -CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|++|||||....                   ..    .+.+++.+.+.+ .+++++ |+......    ......|.
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~----~~~~~~Y~  150 (275)
T PRK08263         76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISA----FPMSGIYH  150 (275)
T ss_pred             CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCC----CCCccHHH
Confidence             57999999997541                   11    233444455556 666663 54332111    11145688


Q ss_pred             HHHHHHHHHHH
Q 044721          131 ATKAKIRRAVE  141 (263)
Q Consensus       131 ~~k~~~e~~~~  141 (263)
                      .+|.+++.+.+
T Consensus       151 ~sKaa~~~~~~  161 (275)
T PRK08263        151 ASKWALEGMSE  161 (275)
T ss_pred             HHHHHHHHHHH
Confidence            88888777554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=3.8e-17  Score=134.62  Aligned_cols=174  Identities=21%  Similarity=0.187  Sum_probs=106.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|+++.|+..    ...+   .+...++..+.+|++|+++++++++      
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~----~~~~---~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE----NEAK---ELREKGVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH----HHHH---HHHhCCCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999998877632    1221   2222357889999999999888765      


Q ss_pred             -CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||.......    ..-.+...+.                     |....+..++..++.+.++.+     +
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~~~~~~l~~~~~~~~-----g  131 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKI---------------------NLNGAIYTTYEFLPLLKLSKN-----G  131 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhH---------------------hhHHHHHHHHHHHHHHHhcCC-----c
Confidence             68999999987531110    0001111111                     112233344444443332221     3


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++++++.....            ....+...|..+|.+...+.+.++.+++..++++|+|+||+..++.
T Consensus       132 ~iv~isS~~~~~------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~  189 (255)
T PRK06463        132 AIVNIASNAGIG------------TAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM  189 (255)
T ss_pred             EEEEEcCHHhCC------------CCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence            444433332110            0112233455555555557777788889999999999999765543

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.7e-17  Score=138.19  Aligned_cols=78  Identities=22%  Similarity=0.254  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +|+++|||+ |+||+++++.|+ +|++|++++|+.     ++.+ ..+.+.  +.++..+++|++|+++++++++     
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~   74 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNE-----ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL   74 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence            578999998 799999999996 899999999984     2222 122222  2357789999999998887764     


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|++|||||...
T Consensus        75 g~id~li~nAG~~~   88 (275)
T PRK06940         75 GPVTGLVHTAGVSP   88 (275)
T ss_pred             CCCCEEEECCCcCC
Confidence             5899999999753

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.73  E-value=5.8e-17  Score=132.97  Aligned_cols=127  Identities=18%  Similarity=0.182  Sum_probs=89.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------Cc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------QV   77 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   77 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++..+.+|++|.++++++++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999998     433332222223467889999999998887664       69


Q ss_pred             CEEEEcCCCcc--------------------ch----hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHH
Q 044721           78 DVVISTVGHTL--------------------LG----DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        78 d~vv~~a~~~~--------------------~~----~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~  132 (263)
                      |++||++|...                    +.    ..+.+++.+.+.+ .+++++ |+.+...    +..+...|..+
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----~~~~~~~Y~~s  150 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW----PYAGGNVYGAT  150 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC----CCCCCchhHHH
Confidence            99999998631                    00    1244555566666 667764 5543211    12225578888


Q ss_pred             HHHHHHHHH
Q 044721          133 KAKIRRAVE  141 (263)
Q Consensus       133 k~~~e~~~~  141 (263)
                      |.+++.+.+
T Consensus       151 K~~~~~~~~  159 (248)
T PRK10538        151 KAFVRQFSL  159 (248)
T ss_pred             HHHHHHHHH
Confidence            888877543

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.4e-17  Score=135.78  Aligned_cols=128  Identities=23%  Similarity=0.248  Sum_probs=92.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      .|+++||||+|+||++++++|+++|++|+++.|+     ++..+.+......++.++.+|++|.++++++++       +
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRR-----PDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999998     333332222223468889999999998887664       5


Q ss_pred             cCEEEEcCCCcc-------------------chhHHHHHHHH----HHhCCcceeee-ccccCCCCccccCCCCchHHHH
Q 044721           77 VDVVISTVGHTL-------------------LGDQVKIIAAI----KEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        77 ~d~vv~~a~~~~-------------------~~~~~~l~~~~----~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~  132 (263)
                      +|+||||||...                   +..+.++++++    .+.+ .+++++ |+++...    +..+...|..+
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~~Y~~s  151 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQI----AYPGFSLYHAT  151 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccc----CCCCCchhHHH
Confidence            899999998753                   12234555554    5556 677774 6654321    12236789999


Q ss_pred             HHHHHHHHH
Q 044721          133 KAKIRRAVE  141 (263)
Q Consensus       133 k~~~e~~~~  141 (263)
                      |.+++.+++
T Consensus       152 K~a~~~~~~  160 (276)
T PRK06482        152 KWGIEGFVE  160 (276)
T ss_pred             HHHHHHHHH
Confidence            999998775

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.1e-17  Score=133.75  Aligned_cols=171  Identities=14%  Similarity=0.078  Sum_probs=115.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++++||||+++||+++++.|+++|++|++++|+.     ++.+ ..+.+.  +.++..+.+|++|+++++++++   
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~-----~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQ-----SALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIE   77 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999984     3322 112221  3356778899999998887653   


Q ss_pred             -----CcCEEEEcCCCccchh------HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC
Q 044721           76 -----QVDVVISTVGHTLLGD------QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG  144 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~------~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~  144 (263)
                           ++|++|||+|......      ...+.+... .                     +..+.+..++.....+.++..
T Consensus        78 ~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~-~---------------------~~~~~~~~~~~~~~~m~~~~~  135 (227)
T PRK08862         78 QQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLS-S---------------------LASTLFTYGQVAAERMRKRNK  135 (227)
T ss_pred             HHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHH-H---------------------hhHHHHHHHHHHHHHHHhcCC
Confidence                 6899999997432110      011111111 1                     113345556666655554321


Q ss_pred             CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          145 IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       145 ~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                          .|+++|+++..             +   ......|..+|++...+++.++.++++.++++|+|+||+..++
T Consensus       136 ----~g~Iv~isS~~-------------~---~~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        136 ----KGVIVNVISHD-------------D---HQDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ----CceEEEEecCC-------------C---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                14555544322             1   1223467888888888999999999999999999999987665

>PLN02253 xanthoxin dehydrogenase

Probab=99.73  E-value=2.1e-17  Score=138.04  Aligned_cols=174  Identities=18%  Similarity=0.191  Sum_probs=106.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc-cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     ...+ ..+.+. ..++..+++|++|+++++++++    
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQD-----DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999873     2222 112221 2357889999999999988776    


Q ss_pred             ---CcCEEEEcCCCccch--h----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ---QVDVVISTVGHTLLG--D----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~--~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                         ++|+||||||.....  .    ...-.+...+.                     |....+...+.....+.++.   
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~---------------------N~~g~~~~~~~~~~~~~~~~---  146 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDV---------------------NVKGVFLGMKHAARIMIPLK---  146 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhH---------------------hhHHHHHHHHHHHHHHHhcC---
Confidence               689999999864210  0    00000111111                     11222333343333333221   


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                        .|+++++++....             .+......|..+|.+...+.+.++.+++..+++||++.||...++
T Consensus       147 --~g~ii~isS~~~~-------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~  204 (280)
T PLN02253        147 --KGSIVSLCSVASA-------------IGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA  204 (280)
T ss_pred             --CceEEEecChhhc-------------ccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence              1333333333211             111112245555555555777778889999999999999976544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.73  E-value=3.3e-17  Score=135.17  Aligned_cols=176  Identities=16%  Similarity=0.171  Sum_probs=112.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+. .. +...+.+... ..++.++++|+++.++++++++       
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NW-DETRRLIEKE-GRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HH-HHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999872 11 1111111211 3457889999999999888776       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||+|......    ...-++...+.+                     ....+..+|.....+.++..     ++
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~~~~~~~-----g~  144 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDIN---------------------LNSVYHLSQAVAKVMAKQGS-----GK  144 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHh---------------------CHHHHHHHHHHHHHHHhcCC-----eE
Confidence            6899999999753111    011111111111                     12334445554444443321     44


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++++++...             ..+......|..+|.+...+.+.++.+++..++++|+|+||...++.
T Consensus       145 iv~isS~~~-------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  200 (258)
T PRK06935        145 IINIASMLS-------------FQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN  200 (258)
T ss_pred             EEEECCHHh-------------ccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence            444444331             11122334566666666668888889999999999999999876553

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.73  E-value=2.6e-16  Score=131.74  Aligned_cols=127  Identities=20%  Similarity=0.197  Sum_probs=99.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh------cC-cC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI------KQ-VD   78 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~-~d   78 (263)
                      +|+||||||++|++++++|+++|++|++++|+++..     .      ..+++.+.+|+.|++++.+++      ++ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~-----~------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS-----A------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc-----c------CCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence            489999999999999999999999999999995421     1      235677889999999999998      57 99


Q ss_pred             EEEEcCCCcc--chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHc-CCCEEEEeccC
Q 044721           79 VVISTVGHTL--LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE-GIPYTYGDVLN  154 (263)
Q Consensus        79 ~vv~~a~~~~--~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~-~~~~~~gr~~n  154 (263)
                      .++++++...  .....++++++.++| ++++|+ |+.+....           ...+...++++++. +++|++.|...
T Consensus        70 ~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~-----------~~~~~~~~~~l~~~~gi~~tilRp~~  137 (285)
T TIGR03649        70 AVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKG-----------GPAMGQVHAHLDSLGGVEYTVLRPTW  137 (285)
T ss_pred             EEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCC-----------CchHHHHHHHHHhccCCCEEEEeccH
Confidence            9999987543  345688999999999 999986 55543211           01234567788875 99999999654


Q ss_pred             c
Q 044721          155 H  155 (263)
Q Consensus       155 ~  155 (263)
                      +
T Consensus       138 f  138 (285)
T TIGR03649       138 F  138 (285)
T ss_pred             H
Confidence            3

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.72  E-value=9.3e-18  Score=138.00  Aligned_cols=75  Identities=23%  Similarity=0.344  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..     +.     ....++.++++|++|+++++++++       
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~-----~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP-----ET-----VDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh-----hh-----hcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999842     10     113457889999999999888775       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|||||..
T Consensus        75 ~id~vi~~ag~~   86 (252)
T PRK07856         75 RLDVLVNNAGGS   86 (252)
T ss_pred             CCCEEEECCCCC
Confidence            469999999864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.72  E-value=4e-17  Score=132.87  Aligned_cols=171  Identities=16%  Similarity=0.182  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+...    ..   +.+...++..+.+|++|+++++++++       +
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP----AI---DGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh----HH---HHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            5799999999999999999999999999999998432    11   11222347789999999988877664       4


Q ss_pred             cCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           77 VDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                      +|++|||||.......    ..-++.+.+.                     |....+..++...+.+.+...   ..+++
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~v---------------------n~~~~~~l~~~~~~~~~~~~~---~~g~i  130 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQI---------------------HVNAPYLLNLALEDLLRGHGH---AASDI  130 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHH---------------------cchHHHHHHHHHHHHHHhCCC---CCceE
Confidence            8999999996431110    0111111111                     113344445554443332210   01344


Q ss_pred             cCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       153 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      +++++..             +..+..+...|..+|.+...+.+.++.++++ ++|+|+|+||+..+.
T Consensus       131 v~~ss~~-------------~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~  183 (236)
T PRK06483        131 IHITDYV-------------VEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFN  183 (236)
T ss_pred             EEEcchh-------------hccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecC
Confidence            4443333             2222234456777777777788888899987 499999999987553

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=3.4e-17  Score=134.37  Aligned_cols=132  Identities=17%  Similarity=0.161  Sum_probs=87.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ||.+++++||||+|+||+++++.|+++|++|++. .|+.     .+.+ ..+.+.  +.++.++.+|++|++++.++++ 
T Consensus         1 ~~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (250)
T PRK08063          1 VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR-----KAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQ   75 (250)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            5778999999999999999999999999998764 5663     2221 111111  3457889999999999888776 


Q ss_pred             ------CcCEEEEcCCCccc-------------------hhH----HHHHHHHHHhCCcceeee-ccccCCCCccccCCC
Q 044721           76 ------QVDVVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEP  125 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~  125 (263)
                            ++|+|||++|....                   ...    +.+.+.+.+.+ .+++++ |+.+...    +..+
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~----~~~~  150 (250)
T PRK08063         76 IDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIR----YLEN  150 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcc----CCCC
Confidence                  58999999986431                   111    22333344444 556664 5543221    1122


Q ss_pred             CchHHHHHHHHHHHHHH
Q 044721          126 AKSAFATKAKIRRAVEA  142 (263)
Q Consensus       126 ~~~~~~~k~~~e~~~~~  142 (263)
                      ...|..+|.+++.+++.
T Consensus       151 ~~~y~~sK~a~~~~~~~  167 (250)
T PRK08063        151 YTTVGVSKAALEALTRY  167 (250)
T ss_pred             ccHHHHHHHHHHHHHHH
Confidence            45678888888876543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.72  E-value=4.6e-18  Score=140.32  Aligned_cols=80  Identities=18%  Similarity=0.229  Sum_probs=62.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhc---
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++||||+|+||++++++|+++|++|++++|+..     ..+ ....+.    ..++..+.+|++|.+++.++++   
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   76 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSE-----KAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVD   76 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999998842     221 111111    1357889999999988877664   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|++||+||...
T Consensus        77 ~~~~~id~vv~~ag~~~   93 (259)
T PRK12384         77 EIFGRVDLLVYNAGIAK   93 (259)
T ss_pred             HHcCCCCEEEECCCcCC
Confidence                6899999998653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.72  E-value=1.9e-17  Score=136.06  Aligned_cols=75  Identities=17%  Similarity=0.205  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.       .   .. ...++..+++|++|+++++++++       
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-------~---~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-------L---TQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-------h---hh-cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999999999983       0   11 13457889999999999888775       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|++|||+|...
T Consensus        76 ~id~vi~~ag~~~   88 (252)
T PRK08220         76 PLDVLVNAAGILR   88 (252)
T ss_pred             CCCEEEECCCcCC
Confidence            4899999999753

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.72  E-value=7.8e-17  Score=134.07  Aligned_cols=128  Identities=13%  Similarity=0.069  Sum_probs=89.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |++++++||||||+||+++++.|+++|++|++++|+     +++.+.. ..+  .++.++.+|++|+++++++++     
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLD-----EALAKETAAEL--GLVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh--ccceEEEccCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999998     4343322 222  147889999999998766654     


Q ss_pred             --CcCEEEEcCCCccc-----------------------hhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLL-----------------------GDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-----------------------~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|++|||||....                       ...+.+++.+.+.+ .++++ +||......    ......|
T Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y  150 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIP----VPGMATY  150 (273)
T ss_pred             cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCC----CCCCcch
Confidence              58999999997531                       11234555666666 66776 355432111    1225568


Q ss_pred             HHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVE  141 (263)
Q Consensus       130 ~~~k~~~e~~~~  141 (263)
                      ..+|.+++.+.+
T Consensus       151 ~asKaa~~~~~~  162 (273)
T PRK07825        151 CASKHAVVGFTD  162 (273)
T ss_pred             HHHHHHHHHHHH
Confidence            888987776543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.5e-17  Score=134.71  Aligned_cols=81  Identities=21%  Similarity=0.312  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ...+........++..+.+|++++++++++++       
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999983     22222233333456789999999998887765       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|++|||+|...
T Consensus        89 ~~d~vi~~ag~~~  101 (255)
T PRK06841         89 RIDILVNSAGVAL  101 (255)
T ss_pred             CCCEEEECCCCCC
Confidence            5799999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.5e-17  Score=139.35  Aligned_cols=138  Identities=14%  Similarity=0.066  Sum_probs=91.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.... .+..+.+.. ....++.++.+|++|.++++++++      
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKG-KAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            467999999999999999999999999999999984221 000111111 112457889999999998887765      


Q ss_pred             -CcCEEEEcCCCcc-----------------chh----HHHHHHHHHHhCCcceeee-ccccCCC------Cc---cccC
Q 044721           76 -QVDVVISTVGHTL-----------------LGD----QVKIIAAIKEAGNIKRFFP-SEFGNDV------DR---VHAV  123 (263)
Q Consensus        76 -~~d~vv~~a~~~~-----------------~~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~------~~---~~~~  123 (263)
                       ++|+||||||...                 +..    +..+++.+.+.+ .+++|+ ||.+...      ++   ..+.
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  172 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRY  172 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcccCC
Confidence             5899999998642                 011    355667776666 567764 5533111      00   1122


Q ss_pred             CCCchHHHHHHHHHHHHHH
Q 044721          124 EPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus       124 ~~~~~~~~~k~~~e~~~~~  142 (263)
                      .+...|..+|.+.+.+.+.
T Consensus       173 ~~~~~Y~~SK~a~~~~~~~  191 (306)
T PRK06197        173 NRVAAYGQSKLANLLFTYE  191 (306)
T ss_pred             CcHHHHHHHHHHHHHHHHH
Confidence            3355788888888775543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.72  E-value=3.4e-16  Score=134.97  Aligned_cols=152  Identities=18%  Similarity=0.236  Sum_probs=109.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+|+||||||+||||++++++|+++|++|++++|+...    .......+ ...++.++.+|++|.+++.++++++|+||
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAK----SLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHH----HHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            46899999999999999999999999999999987421    11111121 12457889999999999999999999999


Q ss_pred             EcCCCccc----------------------hhHHHHHHHHHHhCCcceeee-cc---ccCC---------CCcc--ccC-
Q 044721           82 STVGHTLL----------------------GDQVKIIAAIKEAGNIKRFFP-SE---FGND---------VDRV--HAV-  123 (263)
Q Consensus        82 ~~a~~~~~----------------------~~~~~l~~~~~~~~~~~~~i~-S~---~g~~---------~~~~--~~~-  123 (263)
                      |+|+....                      ..+.++++++.+.+.++++++ ||   |+..         .++.  .+. 
T Consensus        85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~  164 (353)
T PLN02896         85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID  164 (353)
T ss_pred             ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence            99986421                      235678888877632677774 54   4421         1121  111 


Q ss_pred             ------CCCchHHHHHHHHHHHHH----HcCCCEEEEeccCchhH
Q 044721          124 ------EPAKSAFATKAKIRRAVE----AEGIPYTYGDVLNHGSL  158 (263)
Q Consensus       124 ------~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~~  158 (263)
                            .+..+|+.+|.+.|+++.    ..++++++.|+.|..+.
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp  209 (353)
T PLN02896        165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGP  209 (353)
T ss_pred             HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCC
Confidence                  123479999999999874    45899999998876443

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.4e-17  Score=137.31  Aligned_cols=81  Identities=11%  Similarity=0.182  Sum_probs=64.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     ...+ ....+.  +.++..+.+|++|+++++++++   
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTA-----ERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALAL   77 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999984     2222 112221  3457889999999998877664   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|++||+||..
T Consensus        78 ~~~g~~d~vi~~ag~~   93 (258)
T PRK07890         78 ERFGRVDALVNNAFRV   93 (258)
T ss_pred             HHcCCccEEEECCccC
Confidence                689999999864

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5.8e-17  Score=137.45  Aligned_cols=81  Identities=16%  Similarity=0.207  Sum_probs=64.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh----ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF----KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~----~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+     +.+ ..+.+    ...++.++.+|++|.++++++++ 
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~-----~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~   86 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRA-----KGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ   86 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999999843     222 11222    12357889999999999887765 


Q ss_pred             ------CcCEEEEcCCCc
Q 044721           76 ------QVDVVISTVGHT   87 (263)
Q Consensus        76 ------~~d~vv~~a~~~   87 (263)
                            ++|++|||||..
T Consensus        87 ~~~~~~~iD~li~nAG~~  104 (313)
T PRK05854         87 LRAEGRPIHLLINNAGVM  104 (313)
T ss_pred             HHHhCCCccEEEECCccc
Confidence                  589999999975

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.71  E-value=7.4e-17  Score=133.20  Aligned_cols=131  Identities=15%  Similarity=0.127  Sum_probs=90.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|++...    .+..+.+.  +.++..+++|++|.++++++++     
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA----NAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH----HHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999984221    11112221  3356779999999999887765     


Q ss_pred             --CcCEEEEcCCCccc-------------------hh----HHHHHHHH-HHhCCcceeee-ccccCCCCccccCCCCch
Q 044721           76 --QVDVVISTVGHTLL-------------------GD----QVKIIAAI-KEAGNIKRFFP-SEFGNDVDRVHAVEPAKS  128 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-------------------~~----~~~l~~~~-~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~  128 (263)
                        ++|++|||+|....                   ..    ++++++.+ ...+ .+++++ |+......    ..+...
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~----~~~~~~  156 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEA----SPLKSA  156 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCC----CCCCcc
Confidence              48999999997531                   11    34566666 5556 677774 55432111    122456


Q ss_pred             HHHHHHHHHHHHHH
Q 044721          129 AFATKAKIRRAVEA  142 (263)
Q Consensus       129 ~~~~k~~~e~~~~~  142 (263)
                      |..+|.+++.+++.
T Consensus       157 y~~sk~a~~~~~~~  170 (262)
T PRK13394        157 YVTAKHGLLGLARV  170 (262)
T ss_pred             cHHHHHHHHHHHHH
Confidence            88888888776543

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.5e-17  Score=135.69  Aligned_cols=176  Identities=18%  Similarity=0.108  Sum_probs=108.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     +..+ ..+.+.  +.++..+.+|++|++++.++++   
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~-----~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   78 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDK-----PGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAF   78 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999884     2222 222222  2347788999999999888765   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||......    ...-++...+.                     |....+..++.....+.++..   
T Consensus        79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~---------------------N~~g~~~l~~~~~p~m~~~~~---  134 (275)
T PRK05876         79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDV---------------------DLWGSIHTVEAFLPRLLEQGT---  134 (275)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhh---------------------hhHHHHHHHHHHHHHHHhcCC---
Confidence                4799999999753111    00111111111                     112233334444444433321   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                       -|++++.+|...             ..+......|..+|.+...+.+.++.++...++++++|+||...++.
T Consensus       135 -~g~iv~isS~~~-------------~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  193 (275)
T PRK05876        135 -GGHVVFTASFAG-------------LVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL  193 (275)
T ss_pred             -CCEEEEeCChhh-------------ccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence             133444333331             11222334455555555556777777888889999999999765543

>PRK06128 oxidoreductase; Provisional

Probab=99.71  E-value=9.3e-17  Score=135.46  Aligned_cols=84  Identities=15%  Similarity=0.168  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCc-chhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP-SKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|++|||||+|+||+++++.|+++|++|++..|+...... +..+.++.. +.++.++.+|++|.++++++++      
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999988776321100 111111111 3457789999999998887764      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|+||||||..
T Consensus       133 g~iD~lV~nAg~~  145 (300)
T PRK06128        133 GGLDILVNIAGKQ  145 (300)
T ss_pred             CCCCEEEECCccc
Confidence             689999999964

>PRK05717 oxidoreductase; Validated

Probab=99.71  E-value=1.6e-16  Score=130.84  Aligned_cols=80  Identities=11%  Similarity=0.141  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     .+... .+.+ ..++.++.+|++|.+++.++++     
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDR-----ERGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQ   81 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCH-----HHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998873     22221 1222 3467889999999988866554     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|||||..
T Consensus        82 ~g~id~li~~ag~~   95 (255)
T PRK05717         82 FGRLDALVCNAAIA   95 (255)
T ss_pred             hCCCCEEEECCCcc
Confidence              589999999965

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.71  E-value=6.8e-16  Score=131.52  Aligned_cols=142  Identities=23%  Similarity=0.324  Sum_probs=108.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+++||||+|+||+++++.|+++|++|++++|++..     ..   .+...++.++.+|++|.+++.++++++|+|||+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~---~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD-----RR---NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc-----cc---ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence            479999999999999999999999999999998432     11   1112367889999999999999999999999999


Q ss_pred             CCcc-------------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCccccCCC---CchHHHHHHHHHHH
Q 044721           85 GHTL-------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRVHAVEP---AKSAFATKAKIRRA  139 (263)
Q Consensus        85 ~~~~-------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~~~~~~---~~~~~~~k~~~e~~  139 (263)
                      +...             +..+.++++++.+.+ ++++++ |+   |+..     .+++.+..+   ...|..+|.+.|++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence            7532             234578899999988 888885 54   4421     122333332   35788999999998


Q ss_pred             HHH----cCCCEEEEeccCc
Q 044721          140 VEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       140 ~~~----~~~~~~~gr~~n~  155 (263)
                      ++.    .++++++.|..+.
T Consensus       152 ~~~~~~~~~~~~~ilR~~~~  171 (328)
T TIGR03466       152 ALEMAAEKGLPVVIVNPSTP  171 (328)
T ss_pred             HHHHHHhcCCCEEEEeCCcc
Confidence            864    5899999987664

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.2e-16  Score=131.53  Aligned_cols=128  Identities=16%  Similarity=0.157  Sum_probs=91.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-h--ccCCcEEEEccCCCHHHHHHHhc-CcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KKLGVNLVIGDVLNHESLVKAIK-QVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~-~~d~   79 (263)
                      +++++||||+|+||+++++.|++.|++|++++|+.     ...+.+.. .  ...++.++.+|++|++++.+++. ++|+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~   76 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIA-----PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDV   76 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCE
Confidence            46899999999999999999999999999999983     22221111 1  13457889999999999999887 8999


Q ss_pred             EEEcCCCccc-----------------------hhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHH
Q 044721           80 VISTVGHTLL-----------------------GDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        80 vv~~a~~~~~-----------------------~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~  135 (263)
                      ||||||....                       ...+.+++.+.+.+ .++++. |+.+....    ......|..+|.+
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~----~~~~~~Y~~sK~a  151 (257)
T PRK09291         77 LLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLIT----GPFTGAYCASKHA  151 (257)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccC----CCCcchhHHHHHH
Confidence            9999986431                       11234556666677 677774 55432211    1124578889999


Q ss_pred             HHHHHH
Q 044721          136 IRRAVE  141 (263)
Q Consensus       136 ~e~~~~  141 (263)
                      ++.+.+
T Consensus       152 ~~~~~~  157 (257)
T PRK09291        152 LEAIAE  157 (257)
T ss_pred             HHHHHH
Confidence            887654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.70  E-value=1.7e-16  Score=131.48  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||++++++|+++|++|++++|+.     ++.+ ....+.  +.++..+++|++|+++++++++    
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ-----ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999998873     2222 112221  2357889999999999888775    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|++|||||...
T Consensus        84 ~~~~id~li~~ag~~~   99 (265)
T PRK07097         84 EVGVIDILVNNAGIIK   99 (265)
T ss_pred             hCCCCCEEEECCCCCC
Confidence               4899999999753

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.70  E-value=9.4e-17  Score=136.84  Aligned_cols=173  Identities=17%  Similarity=0.136  Sum_probs=112.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     +++++. .+.+.  +.++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARD-----EEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999998     333322 12221  3456788999999999888763    


Q ss_pred             ---CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||.......    ..-.+...+.                     |....+..++..+..+.++..    
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~v---------------------N~~g~~~~~~~~lp~~~~~~~----  135 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQT---------------------NLIGYMRDAHAALPIFKKQGH----  135 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh---------------------hhHHHHHHHHHHHHHHHHcCC----
Confidence               68999999997532110    0111111111                     112233445555544443322    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCC-ccccccCCCCCcchh
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGND-VDRVNAVEPAKSAFV  219 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vn~v~pg~~~~~  219 (263)
                       |+++|++|..             +..+......|..+|.+...+++.++.|+... +++|++|.||...++
T Consensus       136 -g~iV~isS~~-------------~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~  193 (330)
T PRK06139        136 -GIFINMISLG-------------GFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTP  193 (330)
T ss_pred             -CEEEEEcChh-------------hcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCc
Confidence             4555554443             22223344567777777777888888888764 899999999965543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.70  E-value=5.2e-17  Score=147.01  Aligned_cols=172  Identities=17%  Similarity=0.205  Sum_probs=117.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      .+|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+....+.++..+.+|++|+++++++++       
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRD-----AEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998     333332222223456778999999999888775       


Q ss_pred             CcCEEEEcCCCccc-hh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 QVDVVISTVGHTLL-GD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                      .+|++|||||.... ..    ...-++.+.+.                     |....+..++.....+ +.      .|
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~~~~~~~~~~-~~------~g  394 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDV---------------------NLSGAFACARAAARLM-SQ------GG  394 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHh---------------------CcHHHHHHHHHHHHHh-cc------CC
Confidence            58999999997521 11    01111111111                     1133444556555554 21      14


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++|+++..             +..+..+...|..+|.+...+++.++.++++.+|+||+|+||+..++.
T Consensus       395 ~iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        395 VIVNLGSIA-------------SLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             EEEEECchh-------------hcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence            555555554             222333445677777777778888999999999999999999876654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.7e-16  Score=127.14  Aligned_cols=77  Identities=22%  Similarity=0.310  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----CcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----QVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   78 (263)
                      |++++||||+|+||+++++.|+++|++|++++|+...     .+.+...  .++..+.+|++|+++++++++     ++|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~id   73 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ-----DTALQAL--PGVHIEKLDMNDPASLDQLLQRLQGQRFD   73 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc-----hHHHHhc--cccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence            4789999999999999999999999999999998532     2222222  356788899999998887776     589


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +||||+|..
T Consensus        74 ~vi~~ag~~   82 (225)
T PRK08177         74 LLFVNAGIS   82 (225)
T ss_pred             EEEEcCccc
Confidence            999999874

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.5e-16  Score=131.35  Aligned_cols=80  Identities=15%  Similarity=0.084  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ ....+.++.++.+|++|.+++.++++       
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDIN-----EAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999998     3333322 22223568899999999998887654       


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|+||||||...
T Consensus        76 ~~id~vi~~ag~~~   89 (260)
T PRK08267         76 GRLDVLFNNAGILR   89 (260)
T ss_pred             CCCCEEEECCCCCC
Confidence             5699999999753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.70  E-value=4.8e-16  Score=126.28  Aligned_cols=142  Identities=32%  Similarity=0.469  Sum_probs=110.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCEEEEcC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTV   84 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vv~~a   84 (263)
                      ||||||||+||+++++.|+++|+.|+.+.|+...     ......  ..++..+.+|+.|.+.++++++.  +|+|||+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~-----~~~~~~--~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNS-----ESFEEK--KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTG-----GHHHHH--HTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccc-----cccccc--cceEEEEEeeccccccccccccccCceEEEEee
Confidence            7999999999999999999999999988888532     111011  12788999999999999999985  59999999


Q ss_pred             CCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC----CccccCCCCchHHHHHHHHHHHHH
Q 044721           85 GHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV----DRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        85 ~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~----~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      +...               +..++++++++.+.+ ++++++ |+   |+...    ++..+..|.+.|+.+|...|++++
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~  152 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLR  152 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9852               344689999999999 877774 44   44431    344455678889999999999885


Q ss_pred             ----HcCCCEEEEeccCch
Q 044721          142 ----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       142 ----~~~~~~~~gr~~n~~  156 (263)
                          +.++++++.|..+..
T Consensus       153 ~~~~~~~~~~~~~R~~~vy  171 (236)
T PF01370_consen  153 DYAKKYGLRVTILRPPNVY  171 (236)
T ss_dssp             HHHHHHTSEEEEEEESEEE
T ss_pred             ccccccccccccccccccc
Confidence                348999988876543

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.70  E-value=7.4e-16  Score=143.34  Aligned_cols=151  Identities=21%  Similarity=0.269  Sum_probs=110.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHh--cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAI--KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~--~~~   77 (263)
                      ++|+|||||||||||+++++.|+++  +++|++++|....   .....+ ......++.++.+|++|.+.+..++  .++
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~---~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   81 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC---SNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI   81 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc---chhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence            4689999999999999999999998  5789888875211   111111 1111346889999999998888766  589


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC-------CccccCCCCchHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV-------DRVHAVEPAKSAFA  131 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~-------~~~~~~~~~~~~~~  131 (263)
                      |+|||+|+...               +..+.++++++.+.+.++++|+ |+   ||...       .+..+..|.++|+.
T Consensus        82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~  161 (668)
T PLN02260         82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSA  161 (668)
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHH
Confidence            99999999754               2336789999988754788874 54   44321       23344557789999


Q ss_pred             HHHHHHHHHH----HcCCCEEEEeccCch
Q 044721          132 TKAKIRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       132 ~k~~~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      +|.++|++++    +.++++++.|..++.
T Consensus       162 sK~~aE~~v~~~~~~~~l~~vilR~~~Vy  190 (668)
T PLN02260        162 TKAGAEMLVMAYGRSYGLPVITTRGNNVY  190 (668)
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEECccccc
Confidence            9999999985    358999999977653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.70  E-value=7.3e-17  Score=137.92  Aligned_cols=80  Identities=18%  Similarity=0.263  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+.  +.++..+.+|++|+++++++++    
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~-----~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGE-----EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999983     3322 112221  3457789999999999887764    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++|||||..
T Consensus        82 ~~g~iD~lInnAg~~   96 (334)
T PRK07109         82 ELGPIDTWVNNAMVT   96 (334)
T ss_pred             HCCCCCEEEECCCcC
Confidence               689999999965

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.70  E-value=5.2e-16  Score=143.85  Aligned_cols=146  Identities=22%  Similarity=0.318  Sum_probs=106.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH-HHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES-LVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~v   80 (263)
                      .+|+|||||||||||++++++|+++ |++|++++|+...     ..  ......+++++.+|++|..+ ++++++++|+|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~-----~~--~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~V  386 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA-----IS--RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVV  386 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh-----hh--hhcCCCceEEEeccccCcHHHHHHHhcCCCEE
Confidence            3679999999999999999999986 7999999997421     11  01112468889999998655 67788999999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCC----CCcccc------C-CCCchHH
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGND----VDRVHA------V-EPAKSAF  130 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~----~~~~~~------~-~~~~~~~  130 (263)
                      ||+|+...               +..+.++++++.+.+ . ++| .||   ||..    .+++.+      . +|.+.|+
T Consensus       387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg  464 (660)
T PRK08125        387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYS  464 (660)
T ss_pred             EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchH
Confidence            99998543               244678999999887 4 555 454   5532    122221      1 2345799


Q ss_pred             HHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          131 ATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       131 ~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      .+|..+|.+++    ..++++++.|+.+..+
T Consensus       465 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyG  495 (660)
T PRK08125        465 VSKQLLDRVIWAYGEKEGLRFTLFRPFNWMG  495 (660)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEEceeeC
Confidence            99999999984    4589999999777543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.70  E-value=5.4e-16  Score=131.32  Aligned_cols=140  Identities=27%  Similarity=0.374  Sum_probs=108.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCc-CEEEEcC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQV-DVVISTV   84 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-d~vv~~a   84 (263)
                      +|||||||||||++++++|+++|++|++++|......        ... .++.++.+|++|.+.+.+.++++ |+|||+|
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~a   72 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD--------PLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLA   72 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc--------ccc-cccceeeecccchHHHHHHHhcCCCEEEEcc
Confidence            4999999999999999999999999999999853221        000 35788999999998888888888 9999999


Q ss_pred             CCcc----------------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCcc-ccCCCCchHHHHHHHHHH
Q 044721           85 GHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRV-HAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        85 ~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~-~~~~~~~~~~~~k~~~e~  138 (263)
                      +...                +..+.++++++.+.+ ++++++ |+   ++..     .+++ .+..|.++|+.+|..+|+
T Consensus        73 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          73 AQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             ccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8774                223578999999988 999886 44   2321     2333 455666689999999999


Q ss_pred             HHHHc----CCCEEEEeccCc
Q 044721          139 AVEAE----GIPYTYGDVLNH  155 (263)
Q Consensus       139 ~~~~~----~~~~~~gr~~n~  155 (263)
                      ++...    ++++++.|..+.
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~v  172 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNV  172 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeee
Confidence            98643    589998886553

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.5e-16  Score=130.51  Aligned_cols=130  Identities=15%  Similarity=0.094  Sum_probs=88.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc-cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK-KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+..     +.+. ...+. +.++.++++|++|++++.++++    
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEE-----AAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999942     2221 12221 2457789999999999988775    


Q ss_pred             ---CcCEEEEcCCCccc--------------------h----hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ---QVDVVISTVGHTLL--------------------G----DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~--------------------~----~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                         ++|+|||++|....                    .    ..+.+++.+.+.+ .+++++ |+.+...    +..+..
T Consensus        78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~  152 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLR----PRPGLG  152 (251)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcC----CCCCch
Confidence               57999999987421                    0    1234444454455 566663 5543321    122245


Q ss_pred             hHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVE  141 (263)
Q Consensus       128 ~~~~~k~~~e~~~~  141 (263)
                      .|..+|.+.+.+.+
T Consensus       153 ~y~~sk~~~~~~~~  166 (251)
T PRK07231        153 WYNASKGAVITLTK  166 (251)
T ss_pred             HHHHHHHHHHHHHH
Confidence            67778877776544

>PLN02583 cinnamoyl-CoA reductase

Probab=99.69  E-value=9.2e-16  Score=129.20  Aligned_cols=152  Identities=13%  Similarity=0.133  Sum_probs=108.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++||||+|+||+++++.|+++|++|+++.|+...  ....+.+..+.  ..++.++++|++|.+++.+++.++|.+
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v   82 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGE--TEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGL   82 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchh--hhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence            46789999999999999999999999999999986321  11111112221  235788999999999999999999999


Q ss_pred             EEcCCCcc-------------chhHHHHHHHHHHh-CCcceeee-ccccC---C---------CCccccCCC------Cc
Q 044721           81 ISTVGHTL-------------LGDQVKIIAAIKEA-GNIKRFFP-SEFGN---D---------VDRVHAVEP------AK  127 (263)
Q Consensus        81 v~~a~~~~-------------~~~~~~l~~~~~~~-~~~~~~i~-S~~g~---~---------~~~~~~~~~------~~  127 (263)
                      +|.++...             +..+.++++++.+. + ++++|+ ||...   .         .++..+..+      ..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            99875432             34578899998876 5 788874 55321   1         011111111      12


Q ss_pred             hHHHHHHHHHHHHH----HcCCCEEEEeccCchh
Q 044721          128 SAFATKAKIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       128 ~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      .|..+|..+|+++.    +.++++++.|..+..+
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~G  195 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMG  195 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccC
Confidence            68889999999883    4689999888776543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.2e-16  Score=130.22  Aligned_cols=128  Identities=20%  Similarity=0.223  Sum_probs=85.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhc------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+.     ++.+.. +.+.. .++..+.+|++|++++.++++      
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   76 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRT-----DALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH   76 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999999999983     333221 22211 167889999999999988765      


Q ss_pred             -CcCEEEEcCCCccc--------------------hhH----HHHHHHHHHhCCcceee-eccccCCCCccccCCCCchH
Q 044721           76 -QVDVVISTVGHTLL--------------------GDQ----VKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 -~~d~vv~~a~~~~~--------------------~~~----~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~  129 (263)
                       .+|++|||+|....                    ...    ..+++.+.+.+ .++++ +||......    ......|
T Consensus        77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~----~~~~~~Y  151 (257)
T PRK07024         77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRG----LPGAGAY  151 (257)
T ss_pred             CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCC----CCCCcch
Confidence             37999999986420                    011    22344555555 56665 343221111    1114467


Q ss_pred             HHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVE  141 (263)
Q Consensus       130 ~~~k~~~e~~~~  141 (263)
                      ..+|.+++.+.+
T Consensus       152 ~asK~a~~~~~~  163 (257)
T PRK07024        152 SASKAAAIKYLE  163 (257)
T ss_pred             HHHHHHHHHHHH
Confidence            778887777654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.5e-16  Score=129.05  Aligned_cols=79  Identities=16%  Similarity=0.188  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++++++||||+|+||++++++|+++|++|++++|+     .++.+. .+.+ +.++..+++|++|.+++.++++      
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRD-----PASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999988     333222 1222 3457788999999887766544      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|++|||||..
T Consensus        79 ~~id~vi~~ag~~   91 (249)
T PRK06500         79 GRLDAVFINAGVA   91 (249)
T ss_pred             CCCCEEEECCCCC
Confidence             689999999864

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.5e-17  Score=133.03  Aligned_cols=180  Identities=18%  Similarity=0.139  Sum_probs=109.3

Q ss_pred             CCCCeEEEEcCCC-hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTG-YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++++++||||+| +||+++++.|+++|++|++++|+.... ....+.+.. ....++..+++|++++++++++++    
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL-GETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999997 899999999999999999999874221 001111111 112357789999999998887764    


Q ss_pred             ---CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||+|.......    ..-++...+.                     +....+...+.....+.+...    
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~l~~~~~~~~~~~~~----  148 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDV---------------------TLTGTFRATRAALRYMRARGH----  148 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH---------------------hhHHHHHHHHHHHHHHHhcCC----
Confidence               58999999996431110    0000111111                     112233344444444333221    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .|++++..+..             +.........|..+|.+...+.+.++.++++++|+||+|+||...++.
T Consensus       149 ~g~iv~~ss~~-------------~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~  207 (262)
T PRK07831        149 GGVIVNNASVL-------------GWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF  207 (262)
T ss_pred             CcEEEEeCchh-------------hcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence            13333333322             111222334566666666668888889999999999999999766543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.6e-16  Score=127.86  Aligned_cols=122  Identities=18%  Similarity=0.160  Sum_probs=85.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+....             ....++.+|++|+++++++++      
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-------------FPGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-------------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999999985320             012568899999998888776      


Q ss_pred             CcCEEEEcCCCccch-------------------h----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHH
Q 044721           76 QVDVVISTVGHTLLG-------------------D----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFA  131 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~-------------------~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~  131 (263)
                      ++|++|||+|.....                   .    .+.+++.+.+.+ .+++++ |+.+....     .....|..
T Consensus        68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~Y~~  141 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFGA-----LDRTSYSA  141 (234)
T ss_pred             CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccCC-----CCchHHHH
Confidence            689999999975310                   1    233445555566 666663 54332111     11456777


Q ss_pred             HHHHHHHHHHH
Q 044721          132 TKAKIRRAVEA  142 (263)
Q Consensus       132 ~k~~~e~~~~~  142 (263)
                      +|.+++.+++.
T Consensus       142 sK~a~~~~~~~  152 (234)
T PRK07577        142 AKSALVGCTRT  152 (234)
T ss_pred             HHHHHHHHHHH
Confidence            88877775543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.6e-16  Score=129.23  Aligned_cols=131  Identities=15%  Similarity=0.136  Sum_probs=90.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh-ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF-KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+..     ..+ ..+.+ .+.++..+++|++|+++++++++    
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAE-----AAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999842     221 11222 13457889999999999888765    


Q ss_pred             ---CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCch
Q 044721           76 ---QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKS  128 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~  128 (263)
                         ++|+|||++|....                   ..    .+.+++.+.+.+ .+++++ |+......    ......
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~----~~~~~~  152 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAG----GRGRAA  152 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccC----CCCccH
Confidence               68999999996431                   01    134445555666 667764 55422111    112456


Q ss_pred             HHHHHHHHHHHHHH
Q 044721          129 AFATKAKIRRAVEA  142 (263)
Q Consensus       129 ~~~~k~~~e~~~~~  142 (263)
                      |..+|.+.+.+++.
T Consensus       153 Y~~sK~a~~~~~~~  166 (252)
T PRK06138        153 YVASKGAIASLTRA  166 (252)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88899888876653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.69  E-value=3.5e-17  Score=134.91  Aligned_cols=207  Identities=16%  Similarity=0.091  Sum_probs=127.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhcC
Q 044721            6 KILFIGGTGYIGKFIVEASVK----AGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      +++||||+++||.++++.|++    .|++|++++|+..     +.+ ..+.+.    ..++.++.+|++|.++++++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDE-----ALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHH-----HHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence            689999999999999999997    7999999999842     222 112221    23577899999999988877652


Q ss_pred             -----------cCEEEEcCCCccchh-------HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHH
Q 044721           77 -----------VDVVISTVGHTLLGD-------QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        77 -----------~d~vv~~a~~~~~~~-------~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~  138 (263)
                                 .|++|||||......       ...-++...+                     .|....+..++.....
T Consensus        77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~---------------------vN~~~~~~~~~~~~~~  135 (256)
T TIGR01500        77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWA---------------------LNLTSMLCLTSSVLKA  135 (256)
T ss_pred             HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHH---------------------hhhHHHHHHHHHHHHH
Confidence                       258999999642100       0011111111                     1223345556665554


Q ss_pred             HHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcch
Q 044721          139 AVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAF  218 (263)
Q Consensus       139 ~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~  218 (263)
                      +.++.+.   .++++++++..             +..+..+...|..+|.+...+.+.++.++++.++++|+|.||+..+
T Consensus       136 l~~~~~~---~~~iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T  199 (256)
T TIGR01500       136 FKDSPGL---NRTVVNISSLC-------------AIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT  199 (256)
T ss_pred             HhhcCCC---CCEEEEECCHH-------------hCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence            4433211   13455555544             2223344567888888887899999999999999999999998876


Q ss_pred             hcHHHHHHHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          219 VTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      +.......   ...-+  ..........+++++.+|+|+|.
T Consensus       200 ~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~p~eva~  235 (256)
T TIGR01500       200 DMQQQVRE---ESVDP--DMRKGLQELKAKGKLVDPKVSAQ  235 (256)
T ss_pred             hHHHHHHH---hcCCh--hHHHHHHHHHhcCCCCCHHHHHH
Confidence            54332211   10000  00001112346788888888764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.69  E-value=7.9e-16  Score=135.58  Aligned_cols=144  Identities=15%  Similarity=0.265  Sum_probs=102.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      .|+|+||||+||||++|++.|+++|++|++++|..... .....  ......+++++..|+.+.     .+.++|+|||+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~-~~~~~--~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHl  191 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR-KENLV--HLFGNPRFELIRHDVVEP-----ILLEVDQIYHL  191 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc-HhHhh--hhccCCceEEEECccccc-----cccCCCEEEEC
Confidence            47899999999999999999999999999999863221 11111  111123577888888764     34689999999


Q ss_pred             CCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCCC----Ccc-----ccCCCCchHHHHHHHH
Q 044721           84 VGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGNDV----DRV-----HAVEPAKSAFATKAKI  136 (263)
Q Consensus        84 a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~~----~~~-----~~~~~~~~~~~~k~~~  136 (263)
                      |+...               +..+.+++++|.+.+ ++.++.|+   ||...    +++     .+..|.+.|+.+|..+
T Consensus       192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a  270 (436)
T PLN02166        192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  270 (436)
T ss_pred             ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence            98532               334689999999998 75444443   55321    222     2445567899999999


Q ss_pred             HHHHH----HcCCCEEEEeccCch
Q 044721          137 RRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       137 e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      |++++    +.++++++.|+.|..
T Consensus       271 E~~~~~y~~~~~l~~~ilR~~~vY  294 (436)
T PLN02166        271 ETLAMDYHRGAGVEVRIARIFNTY  294 (436)
T ss_pred             HHHHHHHHHHhCCCeEEEEEcccc
Confidence            99885    458999998877654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.69  E-value=2.1e-16  Score=129.12  Aligned_cols=80  Identities=20%  Similarity=0.181  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|+.|++.+|+     .++.+.+....+.++.++.+|++|.++++++++       
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR-----VEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999998888877     333332211113467889999999998887653       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|||||..
T Consensus        80 ~id~vi~~ag~~   91 (245)
T PRK12936         80 GVDILVNNAGIT   91 (245)
T ss_pred             CCCEEEECCCCC
Confidence            689999999964

>PRK05599 hypothetical protein; Provisional

Probab=99.69  E-value=7.3e-17  Score=132.24  Aligned_cols=175  Identities=13%  Similarity=0.094  Sum_probs=108.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc---cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |+++||||+++||.++++.|+ +|++|++++|+.     ++.+ ..+++.   ...+..+.+|++|+++++++++     
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   74 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRP-----EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL   74 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCH-----HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence            579999999999999999999 599999999984     2322 222221   1246789999999998877654     


Q ss_pred             --CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           76 --QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                        ++|++|||||.......   .+.- ... ...++            ..+....+...+...+.+.++..    -|+++
T Consensus        75 ~g~id~lv~nag~~~~~~~---~~~~-~~~-~~~~~------------~~n~~~~~~~~~~~~~~m~~~~~----~g~Iv  133 (246)
T PRK05599         75 AGEISLAVVAFGILGDQER---AETD-EAH-AVEIA------------TVDYTAQVSMLTVLADELRAQTA----PAAIV  133 (246)
T ss_pred             cCCCCEEEEecCcCCCchh---hhcC-cHH-HHHHH------------HHHHHhHHHHHHHHHHHHHhcCC----CCEEE
Confidence              68999999997531110   0000 000 00000            00001222333444443333211    14555


Q ss_pred             CchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          154 NHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       154 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      |++|..             +..+..+...|..+|.+...+++.++.++++.+|++|++.||+..++
T Consensus       134 ~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~  186 (246)
T PRK05599        134 AFSSIA-------------GWRARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS  186 (246)
T ss_pred             EEeccc-------------cccCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence            555544             22223344567788888777889999999999999999999976543

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.4e-16  Score=132.64  Aligned_cols=176  Identities=14%  Similarity=0.179  Sum_probs=107.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCc--chhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP--SKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+......  .+.+ ..+.+.  +.++..+.+|+++++++.++++  
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999997532111  0111 111111  3457888999999999888775  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||......    ..+-.+.+.+.                     |....+...+.....+.++.+  
T Consensus        85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~v---------------------N~~~~~~l~~~~~~~~~~~~~--  141 (273)
T PRK08278         85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQI---------------------NVRGTFLVSQACLPHLKKSEN--  141 (273)
T ss_pred             HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHH---------------------hchHHHHHHHHHHHHHHhcCC--
Confidence                 6899999999753111    00001111111                     112334445554444333322  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                         +++.+.++....           ......+...|..+|.+...+.+.++.+++..+|++|+|.||.
T Consensus       142 ---g~iv~iss~~~~-----------~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~  196 (273)
T PRK08278        142 ---PHILTLSPPLNL-----------DPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT  196 (273)
T ss_pred             ---CEEEEECCchhc-----------cccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence               233332221100           0001133445666666666677888899999999999999984

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.69  E-value=6.4e-16  Score=130.29  Aligned_cols=150  Identities=23%  Similarity=0.302  Sum_probs=111.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |+++.+++||||+||+|++++++|++++  .+|++++..+... ....+. ..+....+..+.+|+.|..++.++++++ 
T Consensus         1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-~~~~e~-~~~~~~~v~~~~~D~~~~~~i~~a~~~~-   77 (361)
T KOG1430|consen    1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-NLPAEL-TGFRSGRVTVILGDLLDANSISNAFQGA-   77 (361)
T ss_pred             CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-ccchhh-hcccCCceeEEecchhhhhhhhhhccCc-
Confidence            6788899999999999999999999998  7899998875421 111110 1112567899999999999999999999 


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccccC-----C---CCc--cccCCCCchHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEFGN-----D---VDR--VHAVEPAKSAFAT  132 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~-----~---~~~--~~~~~~~~~~~~~  132 (263)
                      .++|+|+...               +.++.+++++|.+.+ ++++|+ |+..+     .   .+|  +.+......|..+
T Consensus        78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~s  156 (361)
T KOG1430|consen   78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGES  156 (361)
T ss_pred             eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchH
Confidence            7777776543               567899999999999 999996 54322     1   122  3333334689999


Q ss_pred             HHHHHHHHHHcC----CCEEEEeccC
Q 044721          133 KAKIRRAVEAEG----IPYTYGDVLN  154 (263)
Q Consensus       133 k~~~e~~~~~~~----~~~~~gr~~n  154 (263)
                      |+.+|+++++..    +..+..|...
T Consensus       157 Ka~aE~~Vl~an~~~~l~T~aLR~~~  182 (361)
T KOG1430|consen  157 KALAEKLVLEANGSDDLYTCALRPPG  182 (361)
T ss_pred             HHHHHHHHHHhcCCCCeeEEEEcccc
Confidence            999999997553    5567666544

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.69  E-value=4.8e-16  Score=135.61  Aligned_cols=141  Identities=23%  Similarity=0.325  Sum_probs=113.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhh----ccCCcEEEEccCCCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHF----KKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      ..+|+|+||||+|-||+.+++++++.+. ++++++|++.     +.-.+ .++    ...+...+.+|+.|.+.++++++
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~-----~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~  322 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEY-----KLYLIDMELREKFPELKLRFYIGDVRDRDRVERAME  322 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchH-----HHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHh
Confidence            4689999999999999999999999985 6888888843     32211 122    12567788999999999999999


Q ss_pred             C--cCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHH
Q 044721           76 Q--VDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        76 ~--~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      +  +|+|||+|+.-+               +-++.|+++++.+++ +++++. |+       +..++|.+.|+.+|+.+|
T Consensus       323 ~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iST-------DKAV~PtNvmGaTKr~aE  394 (588)
T COG1086         323 GHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST-------DKAVNPTNVMGATKRLAE  394 (588)
T ss_pred             cCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEec-------CcccCCchHhhHHHHHHH
Confidence            7  999999999887               346799999999999 999985 54       445788999999999999


Q ss_pred             HHHHHc-------CCCEEEEeccCc
Q 044721          138 RAVEAE-------GIPYTYGDVLNH  155 (263)
Q Consensus       138 ~~~~~~-------~~~~~~gr~~n~  155 (263)
                      +++.+.       +..++..|+.|.
T Consensus       395 ~~~~a~~~~~~~~~T~f~~VRFGNV  419 (588)
T COG1086         395 KLFQAANRNVSGTGTRFCVVRFGNV  419 (588)
T ss_pred             HHHHHHhhccCCCCcEEEEEEecce
Confidence            998543       255677777774

>PRK09242 tropinone reductase; Provisional

Probab=99.69  E-value=1.6e-16  Score=130.98  Aligned_cols=80  Identities=16%  Similarity=0.263  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     +..+ ..+.+.    +.++..+.+|++++++++++++  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDA-----DALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999984     2222 112221    2357788999999988776654  


Q ss_pred             -----CcCEEEEcCCCc
Q 044721           76 -----QVDVVISTVGHT   87 (263)
Q Consensus        76 -----~~d~vv~~a~~~   87 (263)
                           ++|++||++|..
T Consensus        83 ~~~~g~id~li~~ag~~   99 (257)
T PRK09242         83 EDHWDGLHILVNNAGGN   99 (257)
T ss_pred             HHHcCCCCEEEECCCCC
Confidence                 689999999964

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.4e-16  Score=131.62  Aligned_cols=130  Identities=13%  Similarity=0.197  Sum_probs=87.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh---c-cCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---K-KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~-~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+..     ..+.. ...   . ..++.++.+|++|++++++ ++ 
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~   74 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPE-----KQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQL   74 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHH-----HHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHH
Confidence            45688999999999999999999999999999999842     22211 111   1 2467889999999988765 43 


Q ss_pred             ------CcCEEEEcCCCccc-------------------hhHH----HHHHHHHHhCCcceeee-ccccCCCCccccCCC
Q 044721           76 ------QVDVVISTVGHTLL-------------------GDQV----KIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEP  125 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~-------------------~~~~----~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~  125 (263)
                            ++|++|||+|....                   ....    .+++.+.+.+ .+++++ |+.+....    ..+
T Consensus        75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~----~~~  149 (280)
T PRK06914         75 VLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVG----FPG  149 (280)
T ss_pred             HHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCC----CCC
Confidence                  57999999986431                   1122    3333345566 666664 54322111    123


Q ss_pred             CchHHHHHHHHHHHHHH
Q 044721          126 AKSAFATKAKIRRAVEA  142 (263)
Q Consensus       126 ~~~~~~~k~~~e~~~~~  142 (263)
                      ...|..+|..++.+++.
T Consensus       150 ~~~Y~~sK~~~~~~~~~  166 (280)
T PRK06914        150 LSPYVSSKYALEGFSES  166 (280)
T ss_pred             CchhHHhHHHHHHHHHH
Confidence            56788899888876653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=9.7e-17  Score=132.31  Aligned_cols=179  Identities=14%  Similarity=0.097  Sum_probs=113.5

Q ss_pred             CCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||  +++||.++++.|+++|++|++++|+..   ++..+.+ +.+ ..++..+++|++|+++++++++    
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~---~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~   81 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA---LRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVRE   81 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc---hhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHH
Confidence            3689999999  899999999999999999999988631   1112211 222 2357789999999998887764    


Q ss_pred             ---CcCEEEEcCCCccchhH-HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 ---QVDVVISTVGHTLLGDQ-VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~-~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                         ++|++|||||....... ..+.+.- ... +.            +....|...++..++.....+. +.      |+
T Consensus        82 ~~g~iD~li~nAG~~~~~~~~~~~~~~~-~~~-~~------------~~~~vN~~~~~~l~~~~~~~m~-~~------g~  140 (256)
T PRK07889         82 HVDGLDGVVHSIGFAPQSALGGNFLDAP-WED-VA------------TALHVSAYSLKSLAKALLPLMN-EG------GS  140 (256)
T ss_pred             HcCCCcEEEEccccccccccCCCcccCC-HHH-HH------------HHHHHHhHHHHHHHHHHHHhcc-cC------ce
Confidence               68999999997521000 0000000 000 00            0011122344555666655543 21      34


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++++++.              +.........|..+|++...+++.++.|+++.+|+||+|+||...++.
T Consensus       141 Iv~is~~--------------~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  195 (256)
T PRK07889        141 IVGLDFD--------------ATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA  195 (256)
T ss_pred             EEEEeec--------------ccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence            4332210              111222334578899998889999999999999999999999877653

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=3.7e-17  Score=132.90  Aligned_cols=74  Identities=18%  Similarity=0.234  Sum_probs=60.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-HHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-ESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vv   81 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....           ...++..+.+|++++ +.+.+.+.++|++|
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv   72 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDILC   72 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEEE
Confidence            568999999999999999999999999999999884221           023577889999997 55555566899999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      ||||..
T Consensus        73 ~~ag~~   78 (235)
T PRK06550         73 NTAGIL   78 (235)
T ss_pred             ECCCCC
Confidence            999853

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.8e-16  Score=128.34  Aligned_cols=80  Identities=15%  Similarity=0.181  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.     +..+ ..+.+.  ..++..+++|+++.++++++++   
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL-----DGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999983     2222 122221  2346788999999998877665   


Q ss_pred             ----CcCEEEEcCCC
Q 044721           76 ----QVDVVISTVGH   86 (263)
Q Consensus        76 ----~~d~vv~~a~~   86 (263)
                          ++|++||+||.
T Consensus        81 ~~~~~id~li~~ag~   95 (252)
T PRK07035         81 ERHGRLDILVNNAAA   95 (252)
T ss_pred             HHcCCCCEEEECCCc
Confidence                58999999985

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.68  E-value=1.2e-15  Score=134.75  Aligned_cols=144  Identities=15%  Similarity=0.283  Sum_probs=102.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|+|||||||||||++++++|+++|++|++++|.....   .......+...+++++.+|+.++.     +.++|+|||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~---~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViH  189 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR---KENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYH  189 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc---hhhhhhhccCCceEEEECCccChh-----hcCCCEEEE
Confidence            458999999999999999999999999999998753221   111111122346788889987753     457999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCCC----Ccc-----ccCCCCchHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGNDV----DRV-----HAVEPAKSAFATKAK  135 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~~----~~~-----~~~~~~~~~~~~k~~  135 (263)
                      +|+...               +..+.+++++|.+.+ ++.++.|+   |+...    ++.     .+..+.+.|..+|.+
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~  268 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT  268 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence            998542               334689999999998 75444454   44321    121     233445779999999


Q ss_pred             HHHHHH----HcCCCEEEEeccCc
Q 044721          136 IRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +|+++.    +.++++++.|+.+.
T Consensus       269 aE~~~~~y~~~~g~~~~ilR~~~v  292 (442)
T PLN02206        269 AETLTMDYHRGANVEVRIARIFNT  292 (442)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccc
Confidence            999885    35899998887664

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.68  E-value=1.2e-16  Score=130.98  Aligned_cols=131  Identities=15%  Similarity=0.207  Sum_probs=88.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.     .+.+.+ ..+.  ..++.++.+|++|.++++++++   
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   75 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNR-----EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAE   75 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999884     222211 1111  3468889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhHHH----HHHHHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQVK----IIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~~~----l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                          ++|++||++|....                   ....+    +++.+.+.+ .+++++ |+.+....    .....
T Consensus        76 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~----~~~~~  150 (250)
T TIGR03206        76 QALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVG----SSGEA  150 (250)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccC----CCCCc
Confidence                58999999986421                   11222    333344555 566663 44322111    11245


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+++.
T Consensus       151 ~Y~~sK~a~~~~~~~  165 (250)
T TIGR03206       151 VYAACKGGLVAFSKT  165 (250)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            688888887776543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06194 hypothetical protein; Provisional

Probab=99.68  E-value=4.1e-16  Score=130.66  Aligned_cols=131  Identities=9%  Similarity=0.016  Sum_probs=90.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |+++++|||||+|+||+++++.|+++|++|++++|+..     ..+ ....+.  +.++.++.+|++|.++++++++   
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~   78 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQD-----ALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAAL   78 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChH-----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999742     222 222222  2357779999999999988776   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhH----HHHHHHHHHhCCc------ceeee-ccccCCCCccc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNI------KRFFP-SEFGNDVDRVH  121 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~------~~~i~-S~~g~~~~~~~  121 (263)
                          ++|+||||||....                   ...    +.+++.+.+.+ .      .+++. ||......   
T Consensus        79 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~g~iv~~sS~~~~~~---  154 (287)
T PRK06194         79 ERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYEGHIVNTASMAGLLA---  154 (287)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCCeEEEEeCChhhccC---
Confidence                47999999997531                   112    23334455554 3      45653 54332211   


Q ss_pred             cCCCCchHHHHHHHHHHHHHH
Q 044721          122 AVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus       122 ~~~~~~~~~~~k~~~e~~~~~  142 (263)
                       ......|..+|.+++.+++.
T Consensus       155 -~~~~~~Y~~sK~a~~~~~~~  174 (287)
T PRK06194        155 -PPAMGIYNVSKHAVVSLTET  174 (287)
T ss_pred             -CCCCcchHHHHHHHHHHHHH
Confidence             12256788999998887754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=2.5e-17  Score=122.49  Aligned_cols=177  Identities=21%  Similarity=0.231  Sum_probs=126.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      .++.+++||+.-+||+.+++.|++.|++|+++.|+     ++.+..+-.....-+..+.+|+++.+.+.+++.   .+|.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~-----~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARN-----EANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecC-----HHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence            47899999999999999999999999999999999     433332222212236788999999998888776   5799


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchhHH
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLV  159 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~  159 (263)
                      ++||||........++    .+.. ..+-+            .+|.......++..+..++...-    -|.++|.++..
T Consensus        81 LVNNAgvA~~~pf~ei----T~q~-fDr~F------------~VNvravi~v~Q~var~lv~R~~----~GaIVNvSSqa  139 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEI----TQQS-FDRTF------------AVNVRAVILVAQLVARNLVDRQI----KGAIVNVSSQA  139 (245)
T ss_pred             hhccchhhhcchHHHH----hHHh-hccee------------eeeeeeeeeHHHHHHHhhhhccC----CceEEEecchh
Confidence            9999998754443222    2222 22221            12223344455555555553321    36677776666


Q ss_pred             HHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcch
Q 044721          160 KAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAF  218 (263)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~  218 (263)
                                   +..+..++..|++.+++...++|+++.|+|+.+||||+|.|-...+
T Consensus       140 -------------s~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT  185 (245)
T KOG1207|consen  140 -------------SIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMT  185 (245)
T ss_pred             -------------cccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEe
Confidence                         5667777888888999988899999999999999999999975443

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.68  E-value=4.1e-16  Score=128.60  Aligned_cols=85  Identities=19%  Similarity=0.273  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|+++.++.........+..+.+.  +.++..+++|++|+++++++++     
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            458999999999999999999999999977777654321111111222221  3457889999999999887765     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|||||..
T Consensus        87 ~~~id~li~~ag~~  100 (257)
T PRK12744         87 FGRPDIAINTVGKV  100 (257)
T ss_pred             hCCCCEEEECCccc
Confidence              689999999974

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.9e-16  Score=130.55  Aligned_cols=178  Identities=13%  Similarity=0.103  Sum_probs=109.5

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCC------Ccch-hhhhhhhc--cCCcEEEEccCCCHHHHH
Q 044721            3 SKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLS------APSK-SQLLDHFK--KLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         3 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~-~~~~~~~~--~~~~~~~~~D~~~~~~~~   71 (263)
                      ++|+++||||+|  +||++++++|+++|++|++++|.....      .... .+..+.+.  +.++..+++|++|.++++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            578999999995  899999999999999999876532110      0111 11111121  345778899999999988


Q ss_pred             HHhc-------CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           72 KAIK-------QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      ++++       .+|++|||||.......    ..-++...+.                     |...++..++.....+.
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~l~~~~~~~~~  143 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMV---------------------NVRATTLLSSQFARGFD  143 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHh
Confidence            8775       48999999986531110    0011111111                     11233444454444333


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      ++.+     |+++++++..             +..+..+...|..+|.+...+.+.++.++++.+|++|+|.||+..++
T Consensus       144 ~~~~-----g~iv~isS~~-------------~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~  204 (256)
T PRK12859        144 KKSG-----GRIINMTSGQ-------------FQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG  204 (256)
T ss_pred             hcCC-----eEEEEEcccc-------------cCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence            2222     4444443332             22223344566666666666788888899999999999999987654

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-16  Score=130.38  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+. .+.+.  ..++.++.+|+++++++.++++    
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE-----SQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999983     33221 12221  3457888999999999887665    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+|||+||..
T Consensus        84 ~~~~id~vi~~Ag~~   98 (263)
T PRK07814         84 AFGRLDIVVNNVGGT   98 (263)
T ss_pred             HcCCCCEEEECCCCC
Confidence               689999999864

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.68  E-value=6.7e-16  Score=126.60  Aligned_cols=136  Identities=26%  Similarity=0.323  Sum_probs=95.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhh-hh----ccCCcE----EEEccCCCHHHHHHHhc-
Q 044721            7 ILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLD-HF----KKLGVN----LVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~----~~~~~~----~~~~D~~~~~~~~~~~~-   75 (263)
                      ||||||+|.||+.++++|++.+ .++++++|+     +.++..++ ++    ..+++.    .+.+|+.|.+.+.++|+ 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~-----E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRD-----ENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES------HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCC-----hhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh
Confidence            7999999999999999999998 479999999     44433222 22    123443    35899999999999999 


Q ss_pred             -CcCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHH
Q 044721           76 -QVDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        76 -~~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~  138 (263)
                       ++|+|||.|+.-+               +.+++++++++.+++ +++++. |+       +...+|.+.|+++|+.+|+
T Consensus        76 ~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IST-------DKAv~PtnvmGatKrlaE~  147 (293)
T PF02719_consen   76 YKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIST-------DKAVNPTNVMGATKRLAEK  147 (293)
T ss_dssp             -T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEE-------CGCSS--SHHHHHHHHHHH
T ss_pred             cCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccc-------cccCCCCcHHHHHHHHHHH
Confidence             9999999999987               346799999999999 999986 54       3346779999999999999


Q ss_pred             HHHHcC-------CCEEEEeccCc
Q 044721          139 AVEAEG-------IPYTYGDVLNH  155 (263)
Q Consensus       139 ~~~~~~-------~~~~~gr~~n~  155 (263)
                      ++...+       ..++..|+-|.
T Consensus       148 l~~~~~~~~~~~~t~f~~VRFGNV  171 (293)
T PF02719_consen  148 LVQAANQYSGNSDTKFSSVRFGNV  171 (293)
T ss_dssp             HHHHHCCTSSSS--EEEEEEE-EE
T ss_pred             HHHHHhhhCCCCCcEEEEEEecce
Confidence            996432       35566676663

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.2e-16  Score=126.85  Aligned_cols=80  Identities=16%  Similarity=0.167  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ...+ ..+.+.  ..++..+.+|++|.++++++++    
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINA-----EGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999983     2221 112221  2356788999999998877665    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        80 ~~~~id~vi~~ag~~   94 (250)
T PRK07774         80 AFGGIDYLVNNAAIY   94 (250)
T ss_pred             HhCCCCEEEECCCCc
Confidence               589999999963

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.68  E-value=2.6e-15  Score=129.47  Aligned_cols=147  Identities=20%  Similarity=0.270  Sum_probs=104.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      |+||||||+||||+++++.|+++|+. |+.+++....   ...+....+ ...++.++.+|++|.+++.++++  ++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA---GNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCcc---chHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence            48999999999999999999999976 5444443211   111111111 12356788999999999999987  58999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHh---------CCcceee-ecc---ccCC--------------CC
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEA---------GNIKRFF-PSE---FGND--------------VD  118 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~---------~~~~~~i-~S~---~g~~--------------~~  118 (263)
                      ||+|+...               +..+.++++++.+.         + +++++ .|+   |+..              .+
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~  156 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFHHISTDEVYGDLPHPDEVENSEELPLFT  156 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEEEecchhhcCCCCccccccccccCCCcc
Confidence            99998643               23468899998764         3 56676 354   5531              13


Q ss_pred             ccccCCCCchHHHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          119 RVHAVEPAKSAFATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       119 ~~~~~~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      ++.+.+|.+.|+.+|.++|.+++    ..++++++.|..+.
T Consensus       157 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v  197 (352)
T PRK10084        157 ETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNN  197 (352)
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccce
Confidence            34456778899999999998885    35888888776553

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.1e-16  Score=133.06  Aligned_cols=173  Identities=14%  Similarity=0.100  Sum_probs=109.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc-cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK-KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+. ...+..+.+|++|.++++++++     
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLE-----EAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     333332 22222 2235566799999998877664     


Q ss_pred             --CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|++|||||.......    ..-++...+.                     |....+...+.....+.+..      
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~v---------------------n~~g~~~l~~~~~~~~~~~~------  135 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDV---------------------NLLGVFHTVRATLPALIERR------  135 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHHHcC------
Confidence              68999999997531110    0001111111                     11223334444444333321      


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      |+++++++..             +..+......|..+|.+...+.+.++.+++..++++|++.||+..++.
T Consensus       136 g~iv~isS~~-------------~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  193 (296)
T PRK05872        136 GYVLQVSSLA-------------AFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL  193 (296)
T ss_pred             CEEEEEeCHh-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence            3344443333             222233445666666666667777888888899999999999765543

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.7e-16  Score=126.17  Aligned_cols=169  Identities=14%  Similarity=0.134  Sum_probs=112.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~v   80 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+....  ..++..+++|++|+++++++++    ++|++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGAR-----RDDLEVAAK--ELDVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--hccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            379999999999999999999999999999998     333322111  1246788999999999988775    58999


Q ss_pred             EEcCCCccc--h-hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchh
Q 044721           81 ISTVGHTLL--G-DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGS  157 (263)
Q Consensus        81 v~~a~~~~~--~-~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~  157 (263)
                      |||+|....  . ....+.+.  ... +.+.            ...|...++..+|.....+. +.      |+++|+++
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~--~~~-~~~~------------~~~N~~~~~~~~~~~~~~~~-~~------g~Iv~isS  131 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADT--ANA-WRNA------------LDATVLSAVLTVQSVGDHLR-SG------GSIISVVP  131 (223)
T ss_pred             EECCCccccCCCCcccchhcC--HHH-HHHH------------HHHHHHHHHHHHHHHHHHhh-cC------CeEEEEec
Confidence            999985310  0 00001110  001 1111            11122345556676665542 21      55555544


Q ss_pred             HHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          158 LVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      ..                 ......|.++|++...+++.++.++++++|++|+|+||+..++
T Consensus       132 ~~-----------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~  176 (223)
T PRK05884        132 EN-----------------PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP  176 (223)
T ss_pred             CC-----------------CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence            21                 1123468888888888999999999999999999999987554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.6e-16  Score=134.34  Aligned_cols=177  Identities=18%  Similarity=0.126  Sum_probs=116.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++.+++...   ...+..+.+.  +.++..+.+|++|+++++++++    
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~---~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL---DASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchh---HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999998876321   1111122221  3457889999999988887764    


Q ss_pred             --CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC-C-CE
Q 044721           76 --QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG-I-PY  147 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~-~-~~  147 (263)
                        ++|++|||||.......    ..-.+...+.                     +....+..++.....+.+... . .-
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~v---------------------n~~g~~~l~~~~~~~~~~~~~~~~~~  145 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAV---------------------HLRGHFLLTRNAAAYWRAKAKAAGGP  145 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH---------------------hhhHHHHHHHHHHHHHHHhhcccCCC
Confidence              68999999997642110    0111111111                     113445556665554432210 0 00


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                      .+|+++++++..             +..+..+...|..+|.+...+++.++.+++.++|+||+|+||.
T Consensus       146 ~~g~iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        146 VYGRIVNTSSEA-------------GLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             CCcEEEEECCcc-------------cccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence            124555554443             2223345567999999988899999999999999999999984

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.7e-16  Score=128.61  Aligned_cols=83  Identities=23%  Similarity=0.241  Sum_probs=63.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~   79 (263)
                      ||+++||||+|+||++++++|+++|++|++++|+.+.. ....+.+......++.++++|++|+++++++++    .+|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERL-ERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            46899999999999999999999999999999984221 011111111113468899999999998888765    4699


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +||++|..
T Consensus        80 vv~~ag~~   87 (243)
T PRK07102         80 VLIAVGTL   87 (243)
T ss_pred             EEECCcCC
Confidence            99999864

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4e-16  Score=127.85  Aligned_cols=130  Identities=18%  Similarity=0.179  Sum_probs=87.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh----ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF----KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+ ..+    .+.++.++.+|++|++++.++++   
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRT-----DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFR   76 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999984     222211 111    13357889999999998877665   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhH----HHHHHHHHHhCCcceee-eccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~  127 (263)
                          ++|++|||||....                   ...    +.+++.+.+.+ .++++ +|+.......   ..+..
T Consensus        77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---~~~~~  152 (248)
T PRK08251         77 DELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGL---PGVKA  152 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCC---CCCcc
Confidence                68999999986431                   111    22333344555 66666 4553321111   11245


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+.+.
T Consensus       153 ~Y~~sK~a~~~~~~~  167 (248)
T PRK08251        153 AYAASKAGVASLGEG  167 (248)
T ss_pred             cHHHHHHHHHHHHHH
Confidence            788899988876653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=2.2e-16  Score=127.94  Aligned_cols=171  Identities=17%  Similarity=0.160  Sum_probs=125.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      +++++|||||++++|+.++.+++++|+++++.+.++... .+-.+..+..  .++....+|+++.+++.+..+       
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~-~etv~~~~~~--g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN-EETVKEIRKI--GEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch-HHHHHHHHhc--CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            468899999999999999999999999999999996543 2222222222  368899999999988876654       


Q ss_pred             CcCEEEEcCCCccc----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLL----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      .+|++|||||....    +...+.++.+.+-+                     -.+.+...|+.+..+++...     |-
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN---------------------~~~~f~t~kaFLP~M~~~~~-----GH  167 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVN---------------------TIAHFWTTKAFLPKMLENNN-----GH  167 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHh---------------------hHHHHHHHHHHhHHHHhcCC-----ce
Confidence            68999999998752    22233444444433                     13345558888888887654     66


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCC---CCccccccCCCCC
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFG---NDVDRVNAVEPAK  215 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vn~v~pg~  215 (263)
                      ++++.|..             |..+..+...|+++|.++.++.+++..|+.   .++|+...|+|+.
T Consensus       168 IV~IaS~a-------------G~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~  221 (300)
T KOG1201|consen  168 IVTIASVA-------------GLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYF  221 (300)
T ss_pred             EEEehhhh-------------cccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeee
Confidence            67766666             777888888888898888888888887763   4667788888883

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2e-16  Score=130.19  Aligned_cols=85  Identities=25%  Similarity=0.279  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++++++||||+|+||++++++|+++| ++|++++|+.+....+..+.+......+++++.+|++|+++++++++      
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            46899999999999999999999995 89999999853210111111222212368889999999888665553      


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|||+|..
T Consensus        87 ~id~li~~ag~~   98 (253)
T PRK07904         87 DVDVAIVAFGLL   98 (253)
T ss_pred             CCCEEEEeeecC
Confidence            699999999875

>PRK12743 oxidoreductase; Provisional

Probab=99.67  E-value=1.9e-16  Score=130.52  Aligned_cols=82  Identities=11%  Similarity=0.125  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|+++.|+..    ...+ ..+.+  .+.++..+.+|++|+++++++++    
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE----EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQ   76 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999999998876532    1211 11222  13468889999999998877665    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|++|||+|...
T Consensus        77 ~~~~id~li~~ag~~~   92 (256)
T PRK12743         77 RLGRIDVLVNNAGAMT   92 (256)
T ss_pred             HcCCCCEEEECCCCCC
Confidence               5899999998753

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.3e-16  Score=127.09  Aligned_cols=81  Identities=15%  Similarity=0.277  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+...     .+..+.+.  +.++..+.+|++++++++++++    
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-----DEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh-----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998432     22222221  3467889999999999888775    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||+|..
T Consensus        80 ~~~~id~vi~~ag~~   94 (258)
T PRK08628         80 KFGRIDGLVNNAGVN   94 (258)
T ss_pred             hcCCCCEEEECCccc
Confidence               589999999954

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.67  E-value=7.2e-16  Score=131.32  Aligned_cols=80  Identities=14%  Similarity=0.262  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+  ...++.++.+|++|.++++++++    
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNL-----KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999983     3322 12222  12357889999999999888775    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        80 ~~~~iD~li~nAg~~   94 (322)
T PRK07453         80 LGKPLDALVCNAAVY   94 (322)
T ss_pred             hCCCccEEEECCccc
Confidence               489999999953

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.67  E-value=4.7e-16  Score=127.29  Aligned_cols=83  Identities=24%  Similarity=0.326  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++|+++|||++|+||+++++.|+++|++|++..+...   ....+.++.+.  +.++..+.+|++|.++++++++    
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999887554321   11122222221  2346678999999998877764    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        78 ~~~~id~li~~ag~~   92 (246)
T PRK12938         78 EVGEIDVLVNNAGIT   92 (246)
T ss_pred             HhCCCCEEEECCCCC
Confidence               689999999975

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.67  E-value=1.4e-15  Score=127.29  Aligned_cols=126  Identities=20%  Similarity=0.213  Sum_probs=101.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCc--CEEEEc
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQV--DVVIST   83 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vv~~   83 (263)
                      +|+||||||+||+++++.|+++|++|++++|+                       .+|+.+++++.++++++  |+|||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999999998875                       36899999999999865  999999


Q ss_pred             CCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCC----CCccccCCCCchHHHHHHHHHHHHH
Q 044721           84 VGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGND----VDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        84 a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      ++...               +..+.++++++.+.+ .+.++.|+   |+..    .+++.+.+|.+.|..+|..+|++++
T Consensus        58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~  136 (287)
T TIGR01214        58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIR  136 (287)
T ss_pred             CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHH
Confidence            98643               123678888988888 64444454   3321    2345556678899999999999999


Q ss_pred             HcCCCEEEEeccCc
Q 044721          142 AEGIPYTYGDVLNH  155 (263)
Q Consensus       142 ~~~~~~~~gr~~n~  155 (263)
                      ..+.++++.|..++
T Consensus       137 ~~~~~~~ilR~~~v  150 (287)
T TIGR01214       137 AAGPNALIVRTSWL  150 (287)
T ss_pred             HhCCCeEEEEeeec
Confidence            88999999987664

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.67  E-value=1.7e-17  Score=135.60  Aligned_cols=195  Identities=17%  Similarity=0.219  Sum_probs=126.1

Q ss_pred             cCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchh-hhhhhhc-cCCcEEEEccCCCHHHHHHHh--------cCcC
Q 044721           11 GGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK-KLGVNLVIGDVLNHESLVKAI--------KQVD   78 (263)
Q Consensus        11 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~--------~~~d   78 (263)
                      |++  ++||++++++|+++|++|++++|+.     ++. ..++.+. ..+..++++|+++++++++++        .++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNE-----EKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSH-----HHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence            566  9999999999999999999999994     331 1222221 223557999999999888774        4689


Q ss_pred             EEEEcCCCccc----hh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           79 VVISTVGHTLL----GD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        79 ~vv~~a~~~~~----~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                      ++|||++....    ..    ...-++...+.+                     ....+..+|.... ++++.      |
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~-~~~~~------g  127 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDIN---------------------VFSPFLLAQAALP-LMKKG------G  127 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHH---------------------THHHHHHHHHHHH-HHHHE------E
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHH---------------------HHHHHHHHHHHHH-HHhhC------C
Confidence            99999987642    11    111122222211                     1334555666666 44443      4


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCC-CccccccCCCCCcchhcHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGN-DVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      +++++++..             +.....+...|..+|.+...++|.++.+|++ ++||||+|+||+..++........ +
T Consensus       128 sii~iss~~-------------~~~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~-~  193 (241)
T PF13561_consen  128 SIINISSIA-------------AQRPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN-E  193 (241)
T ss_dssp             EEEEEEEGG-------------GTSBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH-H
T ss_pred             Ccccccchh-------------hcccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc-c
Confidence            554443333             3444556668888888888899999999999 999999999999887653332210 0


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .       .........+++|+.+|+|+|.
T Consensus       194 ~-------~~~~~~~~~pl~r~~~~~evA~  216 (241)
T PF13561_consen  194 E-------FLEELKKRIPLGRLGTPEEVAN  216 (241)
T ss_dssp             H-------HHHHHHHHSTTSSHBEHHHHHH
T ss_pred             c-------hhhhhhhhhccCCCcCHHHHHH
Confidence            0       0111223456777777777653

...

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.1e-16  Score=128.46  Aligned_cols=131  Identities=17%  Similarity=0.216  Sum_probs=86.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+..     +.+ ..+.+.    ..++.++.+|++|++++.++++ 
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPD-----KLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDA   79 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH-----HHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHH
Confidence            45689999999999999999999999999999999842     221 112221    2357788999999998887776 


Q ss_pred             ------CcCEEEEcCCCcc----c----------------hhHHHHHH----HHHHhCCcceee-eccccCCCCccccCC
Q 044721           76 ------QVDVVISTVGHTL----L----------------GDQVKIIA----AIKEAGNIKRFF-PSEFGNDVDRVHAVE  124 (263)
Q Consensus        76 ------~~d~vv~~a~~~~----~----------------~~~~~l~~----~~~~~~~~~~~i-~S~~g~~~~~~~~~~  124 (263)
                            ++|++||++|...    .                .....+++    .+.+.+ ..+++ +|+......    ..
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~----~~  154 (276)
T PRK05875         80 ATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNT----HR  154 (276)
T ss_pred             HHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCC----CC
Confidence                  6899999998531    0                11122333    333333 34565 354332111    12


Q ss_pred             CCchHHHHHHHHHHHHHH
Q 044721          125 PAKSAFATKAKIRRAVEA  142 (263)
Q Consensus       125 ~~~~~~~~k~~~e~~~~~  142 (263)
                      +...|..+|.+++.+++.
T Consensus       155 ~~~~Y~~sK~a~~~~~~~  172 (276)
T PRK05875        155 WFGAYGVTKSAVDHLMKL  172 (276)
T ss_pred             CCcchHHHHHHHHHHHHH
Confidence            246788888888886653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.67  E-value=3.9e-15  Score=122.39  Aligned_cols=146  Identities=25%  Similarity=0.308  Sum_probs=106.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHh-cCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAI-KQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~-~~~d~v   80 (263)
                      .+|+|+||||||+||+++++.|++.|++|+++.|+..     +...... ...++.++++|++| .+++.+.+ .++|+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD-----KAKTSLP-QDPSLQIVRADVTEGSDKLVEAIGDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH-----HHHHhcc-cCCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence            3689999999999999999999999999999999842     2211100 12368899999998 46777777 689999


Q ss_pred             EEcCCCcc-----------chhHHHHHHHHHHhCCcceeee-ccccCCCC-ccccCCC-------CchHHHHHHHHHHHH
Q 044721           81 ISTVGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVD-RVHAVEP-------AKSAFATKAKIRRAV  140 (263)
Q Consensus        81 v~~a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~-~~~~~~~-------~~~~~~~k~~~e~~~  140 (263)
                      |+++|...           .....++++++.+.+ ++++++ |+.+.... ...+.++       ...++..|..+|+++
T Consensus        90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l  168 (251)
T PLN00141         90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYI  168 (251)
T ss_pred             EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHH
Confidence            99988642           124688999999988 898885 66543211 1111111       122345788899999


Q ss_pred             HHcCCCEEEEeccCc
Q 044721          141 EAEGIPYTYGDVLNH  155 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~  155 (263)
                      ++.++++++.|....
T Consensus       169 ~~~gi~~~iirpg~~  183 (251)
T PLN00141        169 RKSGINYTIVRPGGL  183 (251)
T ss_pred             HhcCCcEEEEECCCc
Confidence            999999999887643

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.5e-16  Score=129.48  Aligned_cols=172  Identities=18%  Similarity=0.182  Sum_probs=109.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+..     ..+.+ +.+.  ..++..+++|++|+++++++++     
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKE-----KLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK   75 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999842     22211 1121  2467889999999998887664     


Q ss_pred             --CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|++|||+|.......    ..-++...+.                     +...++...|...+.+.+...    .
T Consensus        76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~l~~~~~~~~~~~~~----~  130 (252)
T PRK07677         76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDI---------------------VLNGTFYCSQAVGKYWIEKGI----K  130 (252)
T ss_pred             hCCccEEEECCCCCCCCCcccCCHHHHHHHHhH---------------------hhHHHHHHHHHHHHHHHhcCC----C
Confidence              58999999985421110    0001111111                     112334445555555443221    1


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCC-CccccccCCCCCcch
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGN-DVDRVNAVEPAKSAF  218 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vn~v~pg~~~~  218 (263)
                      |++.++++..             +.....+...|..+|.+...+++.++.+++. .++++|+|.||+...
T Consensus       131 g~ii~isS~~-------------~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~  187 (252)
T PRK07677        131 GNIINMVATY-------------AWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIER  187 (252)
T ss_pred             EEEEEEcChh-------------hccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccc
Confidence            4455544443             1112223345666666666688888888875 699999999998763

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.67  E-value=8e-16  Score=128.05  Aligned_cols=76  Identities=24%  Similarity=0.327  Sum_probs=62.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+     .++.+.+   ...++..+.+|++|.++++++++       +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARK-----AEDVEAL---AAAGFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHH---HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999998     3333221   22357788999999998877664       6


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|||||..
T Consensus        73 id~vi~~ag~~   83 (274)
T PRK05693         73 LDVLINNAGYG   83 (274)
T ss_pred             CCEEEECCCCC
Confidence            89999999964

>PRK07069 short chain dehydrogenase; Validated

Probab=99.67  E-value=2.4e-16  Score=129.38  Aligned_cols=127  Identities=12%  Similarity=0.146  Sum_probs=81.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++||||+|+||+++++.|+++|++|++++|+...    +.+ ..+.+.    ...+..+++|++|+++++++++     
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAA----GLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADA   76 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcch----HHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999987321    111 111111    1124457899999998877664     


Q ss_pred             --CcCEEEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|++|||||.....                       ..+.+++.+.+.+ .++++. |+......    ......|
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~----~~~~~~Y  151 (251)
T PRK07069         77 MGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKA----EPDYTAY  151 (251)
T ss_pred             cCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccC----CCCCchh
Confidence              689999999875411                       2245555555555 556653 43322111    1113456


Q ss_pred             HHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVE  141 (263)
Q Consensus       130 ~~~k~~~e~~~~  141 (263)
                      ..+|.+++.+.+
T Consensus       152 ~~sK~a~~~~~~  163 (251)
T PRK07069        152 NASKAAVASLTK  163 (251)
T ss_pred             HHHHHHHHHHHH
Confidence            667776665443

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.67  E-value=1.5e-16  Score=135.08  Aligned_cols=174  Identities=20%  Similarity=0.169  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc----cCCcEEEEccCCC--HHHHH---HH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK----KLGVNLVIGDVLN--HESLV---KA   73 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~~--~~~~~---~~   73 (263)
                      ++.++||||||+||++++++|+++|++|++++|+.     ++.+.+ +++.    ..++..+.+|+++  .+.++   +.
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~-----~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~  127 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNP-----DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET  127 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCH-----HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence            67899999999999999999999999999999984     333321 2221    2346678899985  33333   33


Q ss_pred             hcC--cCEEEEcCCCccch------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           74 IKQ--VDVVISTVGHTLLG------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        74 ~~~--~d~vv~~a~~~~~~------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                      +.+  +|++|||||.....      ....-++...+                     .|....+..++.....+.++.. 
T Consensus       128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~---------------------vN~~g~~~l~~~~lp~m~~~~~-  185 (320)
T PLN02780        128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIK---------------------VNVEGTTKVTQAVLPGMLKRKK-  185 (320)
T ss_pred             hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHH---------------------HhHHHHHHHHHHHHHHHHhcCC-
Confidence            444  56999999975210      00011111111                     1112344456665555544432 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                          |+++|++|.....           .........|.++|.....+.+.++.|+.+.+++|++|+||+..++
T Consensus       186 ----g~IV~iSS~a~~~-----------~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~  244 (320)
T PLN02780        186 ----GAIINIGSGAAIV-----------IPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK  244 (320)
T ss_pred             ----cEEEEEechhhcc-----------CCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence                5566655544211           0011234567777777777888899999999999999999976554

>PRK12742 oxidoreductase; Provisional

Probab=99.66  E-value=8.6e-16  Score=125.02  Aligned_cols=79  Identities=22%  Similarity=0.380  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      ++|+++||||+|+||+++++.|+++|++|+++.|+.    ++..+.+..  ..++..+.+|++|.+++.+.++   ++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS----KDAAERLAQ--ETGATAVQTDSADRDAVIDVVRKSGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC----HHHHHHHHH--HhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence            468999999999999999999999999998877652    222221111  1246778899999988877665   5899


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|||||..
T Consensus        79 li~~ag~~   86 (237)
T PRK12742         79 LVVNAGIA   86 (237)
T ss_pred             EEECCCCC
Confidence            99999875

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6.5e-16  Score=126.31  Aligned_cols=85  Identities=18%  Similarity=0.185  Sum_probs=64.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      .++++++||||+|+||+++++.|+++|++|+++.|+.........+.+... ..++..+.+|++|+++++++++      
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999888776321100111111111 3457889999999999888776      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|++||+||..
T Consensus        82 ~~id~vi~~ag~~   94 (245)
T PRK12937         82 GRIDVLVNNAGVM   94 (245)
T ss_pred             CCCCEEEECCCCC
Confidence             689999999965

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.66  E-value=3.7e-15  Score=126.30  Aligned_cols=146  Identities=20%  Similarity=0.297  Sum_probs=105.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcC--cCEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQ--VDVV   80 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   80 (263)
                      +|+||||||+||++++++|++.|  ++|++++|.......+..   +.+ ...++.++.+|++|++++.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL---ADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh---hhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            58999999999999999999987  678887764321101111   111 123678899999999999999987  9999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHhCCcc-eee-ecc---ccCC-----CCccccCCCCchHHHHHHH
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEAGNIK-RFF-PSE---FGND-----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~~~~~-~~i-~S~---~g~~-----~~~~~~~~~~~~~~~~k~~  135 (263)
                      ||+|+...               ...+.++++++.+.+ .+ +++ .|+   |+..     ..+..+..|.+.|+.+|..
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~  156 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAA  156 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHH
Confidence            99998653               123567888888864 33 555 454   4421     2344555667789999999


Q ss_pred             HHHHHH----HcCCCEEEEeccCc
Q 044721          136 IRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +|.+++    +.++++++.|..++
T Consensus       157 ~e~~~~~~~~~~~~~~~i~R~~~i  180 (317)
T TIGR01181       157 SDHLVRAYHRTYGLPALITRCSNN  180 (317)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccc
Confidence            999875    45899998886654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.66  E-value=2.3e-16  Score=130.42  Aligned_cols=84  Identities=19%  Similarity=0.235  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++++++||||+|+||+++++.|+++|++|+++.|+...   ......+.+.  +.++..+.+|++|.+++.++++    
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEE---EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999988886321   1111112221  3456788999999998887765    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|++|||||...
T Consensus        82 ~~g~id~lv~~ag~~~   97 (261)
T PRK08936         82 EFGTLDVMINNAGIEN   97 (261)
T ss_pred             HcCCCCEEEECCCCCC
Confidence               5899999999753

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.66  E-value=3.4e-16  Score=121.42  Aligned_cols=177  Identities=20%  Similarity=0.184  Sum_probs=119.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|++++||+.|+||+++++.|+++|..+.++..+.++  ++....+++ .....+.++++|+++..+++++|+      
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En--~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN--PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC--HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999887777766433  222222222 234568889999999999998887      


Q ss_pred             -CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc-CCCEEEEecc
Q 044721           76 -QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE-GIPYTYGDVL  153 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~-~~~~~~gr~~  153 (263)
                       .+|++||+||...            +.+ +++.+-            .|.......+..++..+=++. |-   -|-++
T Consensus        82 g~iDIlINgAGi~~------------dkd-~e~Ti~------------vNLtgvin~T~~alpyMdk~~gG~---GGiIv  133 (261)
T KOG4169|consen   82 GTIDILINGAGILD------------DKD-WERTIN------------VNLTGVINGTQLALPYMDKKQGGK---GGIIV  133 (261)
T ss_pred             CceEEEEccccccc------------chh-HHHhhc------------cchhhhhhhhhhhhhhhhhhcCCC---CcEEE
Confidence             5899999999874            222 332221            000011111222222222222 11   25566


Q ss_pred             CchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCC--CCCCccccccCCCCCcchhcHH
Q 044721          154 NHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSE--FGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       154 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      |++|..             |-.+....+.|++++++..+|+|+++..  |...+++.|+||||...++..+
T Consensus       134 NmsSv~-------------GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~  191 (261)
T KOG4169|consen  134 NMSSVA-------------GLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAE  191 (261)
T ss_pred             Eecccc-------------ccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHH
Confidence            766666             6677778888999999998899998775  6778999999999976554433

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1e-15  Score=128.50  Aligned_cols=84  Identities=18%  Similarity=0.281  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+...........++. .+.++.++.+|++|.++++++++       
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4579999999999999999999999999999998743210111111111 13357789999999998887775       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|+||||||..
T Consensus       124 ~iD~lI~~Ag~~  135 (290)
T PRK06701        124 RLDILVNNAAFQ  135 (290)
T ss_pred             CCCEEEECCccc
Confidence            589999999864

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.8e-16  Score=125.08  Aligned_cols=78  Identities=23%  Similarity=0.226  Sum_probs=63.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC----cCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ----VDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~   79 (263)
                      +++++||||+|+||+++++.|+++|++|++++|+     +++.+.+... ..++..+.+|++|.+++++++++    +|.
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~   74 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRN-----QSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPFIPEL   74 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence            4789999999999999999999999999999998     4444322222 24578899999999999998874    689


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|||||..
T Consensus        75 ~i~~ag~~   82 (240)
T PRK06101         75 WIFNAGDC   82 (240)
T ss_pred             EEEcCccc
Confidence            99999853

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.9e-16  Score=125.03  Aligned_cols=80  Identities=25%  Similarity=0.292  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+.++++|+++|++|++++|+.     ++.+.+ +.+.  ..++.++.+|++|.+++.++++    
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQ-----DALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE   79 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999984     222211 1111  2467889999999998877765    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++||++|..
T Consensus        80 ~~~~id~lv~~ag~~   94 (241)
T PRK07454         80 QFGCPDVLINNAGMA   94 (241)
T ss_pred             HcCCCCEEEECCCcc
Confidence               589999999964

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.66  E-value=6.1e-16  Score=127.42  Aligned_cols=80  Identities=18%  Similarity=0.193  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ...+. ...+.  +.++..+.+|++|.+++.++++    
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA-----DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999873     22221 12221  2357788999999998877654    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++|||+|..
T Consensus        85 ~~~~~d~li~~ag~~   99 (255)
T PRK06113         85 KLGKVDILVNNAGGG   99 (255)
T ss_pred             HcCCCCEEEECCCCC
Confidence               579999999964

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=123.83  Aligned_cols=77  Identities=13%  Similarity=0.122  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------   75 (263)
                      ||+++||||+|+||++++++|+++|++|++++|+....    .   ....+.++.++.+|++|.+++++++.        
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~----~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   73 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS----L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV   73 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh----h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence            35899999999999999999999999999999984321    1   11113467889999999998887442        


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         .+|++|||+|..
T Consensus        74 ~~~~~~~~v~~ag~~   88 (243)
T PRK07023         74 DGASRVLLINNAGTV   88 (243)
T ss_pred             cCCCceEEEEcCccc
Confidence               478999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.66  E-value=8.9e-16  Score=127.50  Aligned_cols=79  Identities=14%  Similarity=0.179  Sum_probs=63.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+.     ++.+ ....+.  +.++.++++|++|+++++++++      
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   75 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNE-----EGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW   75 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999984     2222 112221  3467889999999998887765      


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|+||||+|...
T Consensus        76 ~~id~lI~~ag~~~   89 (270)
T PRK05650         76 GGIDVIVNNAGVAS   89 (270)
T ss_pred             CCCCEEEECCCCCC
Confidence             6899999999753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.2e-16  Score=126.43  Aligned_cols=79  Identities=24%  Similarity=0.341  Sum_probs=64.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      +++++||||+|+||+++++.|+++|++|++++|++     .+.+ ..+.+.+.++..+++|+.|.+++.++++       
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDA-----AALAAFADALGDARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999983     3322 2222333467889999999999887775       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++||++|..
T Consensus        77 ~~d~vi~~ag~~   88 (257)
T PRK07074         77 PVDVLVANAGAA   88 (257)
T ss_pred             CCCEEEECCCCC
Confidence            489999999865

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=1.4e-15  Score=125.34  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     +..+ ....+.  +.++..+.+|++|++++.++++    
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA-----ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999984     2222 112221  3457889999999998887765    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|++|||+|...
T Consensus        85 ~~~~id~vi~~ag~~~  100 (256)
T PRK06124         85 EHGRLDILVNNVGARD  100 (256)
T ss_pred             hcCCCCEEEECCCCCC
Confidence               5799999999753

>PRK09135 pteridine reductase; Provisional

Probab=99.65  E-value=7.5e-16  Score=126.15  Aligned_cols=136  Identities=15%  Similarity=0.163  Sum_probs=89.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.....+.....+.......+.++.+|++|.+++.++++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999998742110000111111112357889999999999888776       


Q ss_pred             CcCEEEEcCCCcc-------------------chhHHHHHHHHHHhC--Ccceeee-ccccCCCCccccCCCCchHHHHH
Q 044721           76 QVDVVISTVGHTL-------------------LGDQVKIIAAIKEAG--NIKRFFP-SEFGNDVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        76 ~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~--~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k  133 (263)
                      ++|+|||+||...                   +..+.++++++...-  +-..++. ++..    +..+..+...|..+|
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH----AERPLKGYPVYCAAK  160 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh----hcCCCCCchhHHHHH
Confidence            5799999998532                   222355666654321  0123332 2211    123345577899999


Q ss_pred             HHHHHHHHH
Q 044721          134 AKIRRAVEA  142 (263)
Q Consensus       134 ~~~e~~~~~  142 (263)
                      .+++.+++.
T Consensus       161 ~~~~~~~~~  169 (249)
T PRK09135        161 AALEMLTRS  169 (249)
T ss_pred             HHHHHHHHH
Confidence            999988764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.5e-16  Score=127.72  Aligned_cols=131  Identities=19%  Similarity=0.231  Sum_probs=88.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.     +..+.+ +.....++..+.+|++|++++.++++     
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE-----AALAATAARLPGAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999983     222211 22212246889999999998887764     


Q ss_pred             --CcCEEEEcCCCc-c-------------------chhHHHHHH----HHHHhCCc-ceeee-ccccCCCCccccCCCCc
Q 044721           76 --QVDVVISTVGHT-L-------------------LGDQVKIIA----AIKEAGNI-KRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 --~~d~vv~~a~~~-~-------------------~~~~~~l~~----~~~~~~~~-~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                        ++|+|||++|.. .                   ...+..+++    .+...+ . +++++ |+......    .....
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~----~~~~~  158 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLG----YPGRT  158 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccC----CCCCc
Confidence              689999999976 1                   111233333    334444 4 45554 44322111    11245


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+.+.+++.
T Consensus       159 ~y~~~K~a~~~~~~~  173 (264)
T PRK12829        159 PYAASKWAVVGLVKS  173 (264)
T ss_pred             hhHHHHHHHHHHHHH
Confidence            688899988887654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.5e-15  Score=139.72  Aligned_cols=147  Identities=17%  Similarity=0.218  Sum_probs=107.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHH--HCCCCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCH------HHHHHHhc
Q 044721            5 SKILFIGGTGYIGKFIVEASV--KAGHPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNH------ESLVKAIK   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~------~~~~~~~~   75 (263)
                      |+|||||||||||+++++.|+  +.|++|++++|+..   ....+. .......+++.+.+|++|+      +.++++ +
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS---LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch---HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            489999999999999999999  57899999999732   111111 1111124688999999984      456565 8


Q ss_pred             CcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC---Ccc---ccCCCCchHHHHH
Q 044721           76 QVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV---DRV---HAVEPAKSAFATK  133 (263)
Q Consensus        76 ~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~---~~~---~~~~~~~~~~~~k  133 (263)
                      ++|+|||+|+...            +..+.++++++.+.+ ++++++ |+   ||...   ++.   .+.++.++|+.+|
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK  155 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTK  155 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHH
Confidence            9999999998643            455789999999998 888884 54   33221   111   1223456799999


Q ss_pred             HHHHHHHH-HcCCCEEEEeccCch
Q 044721          134 AKIRRAVE-AEGIPYTYGDVLNHG  156 (263)
Q Consensus       134 ~~~e~~~~-~~~~~~~~gr~~n~~  156 (263)
                      ..+|++++ ..++++++.|..++.
T Consensus       156 ~~~E~~~~~~~g~~~~ilRp~~v~  179 (657)
T PRK07201        156 FEAEKLVREECGLPWRVYRPAVVV  179 (657)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCeee
Confidence            99999997 468999998876653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.65  E-value=1.5e-15  Score=127.01  Aligned_cols=125  Identities=22%  Similarity=0.225  Sum_probs=90.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+||||||+|++|+++.+.|.+.|++|+.++|+                       ..|+.|.+.+.+.++  ++|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence            799999999999999999999999999988666                       468999999999887  5899999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccC----CCCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGN----DVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~----~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +|+...               +..+.++++.+.+.+ .+.+.+|+   |..    ...++++.+|.+.|+.+|.+.|+.+
T Consensus        58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v  136 (286)
T PF04321_consen   58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAV  136 (286)
T ss_dssp             ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHH
T ss_pred             cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHH
Confidence            999865               234578999999999 87777765   322    2466778899999999999999999


Q ss_pred             HHcCCCEEEEecc
Q 044721          141 EAEGIPYTYGDVL  153 (263)
Q Consensus       141 ~~~~~~~~~gr~~  153 (263)
                      ++..-.+.+.|..
T Consensus       137 ~~~~~~~~IlR~~  149 (286)
T PF04321_consen  137 RAACPNALILRTS  149 (286)
T ss_dssp             HHH-SSEEEEEE-
T ss_pred             HHhcCCEEEEecc
Confidence            9866678777743

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.65  E-value=4.2e-16  Score=142.77  Aligned_cols=174  Identities=13%  Similarity=0.071  Sum_probs=110.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .+++++||||+|+||++++++|+++|++|++++|+.     .+.+.+ +.+.  +.++.++.+|++|+++++++++    
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDE-----AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999983     332211 2221  3457889999999999888775    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||......    ...-++.+.+.                     |....+..++.....+.++..    
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~---------------------n~~g~~~~~~~~~~~~~~~~~----  443 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDV---------------------NLWGVIHGCRLFGRQMVERGT----  443 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHH---------------------hhHHHHHHHHHHHHHHHhcCC----
Confidence               4899999999754211    00111111111                     112223334444444433221    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      -|++++++|..             +..+..+...|..+|.+...+.+.++.++++.+|+||+|+||...++
T Consensus       444 ~g~iv~~sS~~-------------~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        444 GGHIVNVASAA-------------AYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             CcEEEEECChh-------------hccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence            13444444433             11222333456666666555777788889999999999999977654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.65  E-value=4e-16  Score=130.95  Aligned_cols=178  Identities=11%  Similarity=-0.013  Sum_probs=111.1

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-------hhhhhcc----CCcEEEEccC--CC
Q 044721            2 ASKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-------LLDHFKK----LGVNLVIGDV--LN   66 (263)
Q Consensus         2 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~----~~~~~~~~D~--~~   66 (263)
                      +++|+++||||  +++||.++++.|+++|++|++ .|+....+..+..       ....+..    .....+.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            46899999999  899999999999999999988 6653221000000       0000100    1135677888  32


Q ss_pred             H------------------HHHHHHhc-------CcCEEEEcCCCccc--hh----HHHHHHHHHHhCCcceeeeccccC
Q 044721           67 H------------------ESLVKAIK-------QVDVVISTVGHTLL--GD----QVKIIAAIKEAGNIKRFFPSEFGN  115 (263)
Q Consensus        67 ~------------------~~~~~~~~-------~~d~vv~~a~~~~~--~~----~~~l~~~~~~~~~~~~~i~S~~g~  115 (263)
                      +                  ++++++++       ++|++|||||....  ..    ...-++.+.+              
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~--------------  151 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAIS--------------  151 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHH--------------
Confidence            2                  35555554       68999999974320  11    0111111111              


Q ss_pred             CCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchh-HHHHHHHHHhcCCce
Q 044721          116 DVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLAD-QVKIIAAIKEAGNVK  194 (263)
Q Consensus       116 ~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  194 (263)
                             .|....+..+|..+..+.+ .      |+++|+++..             +...... ...|..+|++...++
T Consensus       152 -------vN~~~~~~l~~~~~p~m~~-~------G~II~isS~a-------------~~~~~p~~~~~Y~asKaAl~~l~  204 (303)
T PLN02730        152 -------ASSYSFVSLLQHFGPIMNP-G------GASISLTYIA-------------SERIIPGYGGGMSSAKAALESDT  204 (303)
T ss_pred             -------HHhHHHHHHHHHHHHHHhc-C------CEEEEEechh-------------hcCCCCCCchhhHHHHHHHHHHH
Confidence                   1224456667777765533 2      6677766655             2222222 235888999988899


Q ss_pred             eeccCCCCC-CccccccCCCCCcchhcH
Q 044721          195 RFFPSEFGN-DVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       195 ~~~~~~~~~-~~~~vn~v~pg~~~~~~~  221 (263)
                      +.++.|++. ++||||+|+||+..++..
T Consensus       205 ~~la~El~~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        205 RVLAFEAGRKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence            999999996 799999999998776543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.65  E-value=2.3e-16  Score=128.62  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=59.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-------Cc
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-------QV   77 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~   77 (263)
                      ++||||+|+||.++++.|+++|++|++++|+...   ...+..+.+.  +.++.++.+|++|.+++.++++       .+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRS---DAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999998876321   1111112221  3458889999999998877665       57


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|||+|..
T Consensus        78 ~~li~~ag~~   87 (239)
T TIGR01831        78 YGVVLNAGIT   87 (239)
T ss_pred             CEEEECCCCC
Confidence            9999999865

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=1.9e-15  Score=123.23  Aligned_cols=80  Identities=23%  Similarity=0.328  Sum_probs=64.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++++||||+|+||++++++|+++|++|++++|+..     +.+ ..+.+.  +.++.++.+|++++++++++++     
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEE-----NLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999842     222 112221  3357889999999999888776     


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|++||++|...
T Consensus        82 ~~~id~vi~~ag~~~   96 (239)
T PRK07666         82 LGSIDILINNAGISK   96 (239)
T ss_pred             cCCccEEEEcCcccc
Confidence              7999999998753

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.9e-15  Score=124.48  Aligned_cols=78  Identities=18%  Similarity=0.223  Sum_probs=62.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |++++++||||+|+||++++++|+++|++|++++|+.     .+.+.. +.+   ...++++|++|+++++++++     
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~-----~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP-----EAGKAAADEV---GGLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHc---CCcEEEeeCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999983     332211 222   23578899999999888775     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++||+||..
T Consensus        77 ~~~id~vi~~ag~~   90 (255)
T PRK06057         77 YGSVDIAFNNAGIS   90 (255)
T ss_pred             cCCCCEEEECCCcC
Confidence              579999999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=1.3e-14  Score=118.29  Aligned_cols=122  Identities=22%  Similarity=0.237  Sum_probs=103.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+|||||++|++|++|++.|. .+++|+.++|.                       ..|++|++.+.+.++  ++|+|||
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~-----------------------~~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRA-----------------------ELDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCc-----------------------cccccChHHHHHHHHhhCCCEEEE
Confidence            349999999999999999999 66899998888                       279999999999998  6799999


Q ss_pred             cCCCccc---------------hhHHHHHHHHHHhCCcceeeecc---c-c---CCCCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTLL---------------GDQVKIIAAIKEAGNIKRFFPSE---F-G---NDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~~---------------~~~~~l~~~~~~~~~~~~~i~S~---~-g---~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +|+...+               ....++++++.+.| .+.+.+|+   | |   ..+.+.++.+|.+.|+.+|...|..+
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Confidence            9999873               23589999999999 77777663   2 2   23577888999999999999999999


Q ss_pred             HHcCCCEEEEe
Q 044721          141 EAEGIPYTYGD  151 (263)
Q Consensus       141 ~~~~~~~~~gr  151 (263)
                      ++.+-.+.+.|
T Consensus       136 ~~~~~~~~I~R  146 (281)
T COG1091         136 RAAGPRHLILR  146 (281)
T ss_pred             HHhCCCEEEEE
Confidence            99877766655

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.5e-15  Score=123.01  Aligned_cols=133  Identities=15%  Similarity=0.149  Sum_probs=89.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|..... .+..+ ....+.  +.++.++.+|++|.++++++++    
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG-RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999987753321 22222 111221  3457889999999999888764    


Q ss_pred             ---CcCEEEEcCCCcc-------------------chhHHHHHHHHH-----HhCCcceee-eccccCCCCccccCCCCc
Q 044721           76 ---QVDVVISTVGHTL-------------------LGDQVKIIAAIK-----EAGNIKRFF-PSEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ---~~d~vv~~a~~~~-------------------~~~~~~l~~~~~-----~~~~~~~~i-~S~~g~~~~~~~~~~~~~  127 (263)
                         ++|++||++|...                   .....++++.+.     +.+ .++++ +|+.+....    ..+..
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~----~~~~~  158 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRG----NRGQV  158 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCC----CCCCc
Confidence               6899999999754                   112344555554     344 56666 355433211    12255


Q ss_pred             hHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVE  141 (263)
Q Consensus       128 ~~~~~k~~~e~~~~  141 (263)
                      .|..+|.+.+.+++
T Consensus       159 ~y~~sK~a~~~~~~  172 (249)
T PRK12827        159 NYAASKAGLIGLTK  172 (249)
T ss_pred             hhHHHHHHHHHHHH
Confidence            68888888777554

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.64  E-value=8.8e-15  Score=124.52  Aligned_cols=146  Identities=27%  Similarity=0.428  Sum_probs=107.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIST   83 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~~   83 (263)
                      +|+||||+|+||+++++.|+++|++|++++|..... .........  ..++..+.+|+++++++.++++  ++|+|||+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS-PEALKRGER--ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc-hhhhhhhcc--ccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            589999999999999999999999998877643221 111111111  1256788999999999999886  69999999


Q ss_pred             CCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHHHHHHH
Q 044721           84 VGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        84 a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      ||...               +..+.++++++.+.+ ++++++ |+   |+..    .++..+..|...|..+|..+|.++
T Consensus        78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERIL  156 (328)
T ss_pred             ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHH
Confidence            98642               234578889998888 888875 43   3322    234445566788999999999988


Q ss_pred             HH-----cCCCEEEEeccCc
Q 044721          141 EA-----EGIPYTYGDVLNH  155 (263)
Q Consensus       141 ~~-----~~~~~~~gr~~n~  155 (263)
                      +.     .++++++.|..+.
T Consensus       157 ~~~~~~~~~~~~~ilR~~~v  176 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYFNV  176 (328)
T ss_pred             HHHHHhccCCCEEEEecCcc
Confidence            53     6899999997654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.64  E-value=2.9e-15  Score=126.81  Aligned_cols=136  Identities=20%  Similarity=0.238  Sum_probs=93.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HH-HHHHhc-----Cc
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ES-LVKAIK-----QV   77 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~~-----~~   77 (263)
                      |+||||+||||+++++.|+++|++++++.|+....  ...          .....+|+.|.   ++ ++++++     ++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~--~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--TKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcc--hHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999877777663211  000          01123455443   33 333432     69


Q ss_pred             CEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceeeecc---ccCC----CCccccCCCCchHHHHHHHHH
Q 044721           78 DVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFFPSE---FGND----VDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        78 d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~----~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      |+|||+|+...             +..+.++++++.+.+ ++.++.||   |+..    .++..+..|.+.|+.+|..+|
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  148 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFD  148 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHH
Confidence            99999997432             234678999999998 76434454   4432    233445667889999999999


Q ss_pred             HHHHH----cCCCEEEEeccCc
Q 044721          138 RAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       138 ~~~~~----~~~~~~~gr~~n~  155 (263)
                      +++++    .++++++.|+.+.
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~v  170 (308)
T PRK11150        149 EYVRQILPEANSQICGFRYFNV  170 (308)
T ss_pred             HHHHHHHHHcCCCEEEEeeeee
Confidence            88864    4888888886654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.64  E-value=1.8e-15  Score=124.02  Aligned_cols=133  Identities=17%  Similarity=0.114  Sum_probs=92.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+..     +.. ....+.  ..++.++.+|++|+++++++++  
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD-----DAAATAELVEAAGGKARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999842     222 112221  2347889999999999988875  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hhHHHHHHH----HHHhCCcceeee-ccccCCCCccccCCCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GDQVKIIAA----IKEAGNIKRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~~~~l~~~----~~~~~~~~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                           .+|+|||++|....                   ....++++.    +.+.+ .+++++ |+.....   .+....
T Consensus        78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~---~~~~~~  153 (251)
T PRK12826         78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPR---VGYPGL  153 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhc---cCCCCc
Confidence                 68999999987541                   112234443    34555 677764 5543220   112225


Q ss_pred             chHHHHHHHHHHHHHH
Q 044721          127 KSAFATKAKIRRAVEA  142 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~  142 (263)
                      ..|..+|.+++.+++.
T Consensus       154 ~~y~~sK~a~~~~~~~  169 (251)
T PRK12826        154 AHYAASKAGLVGFTRA  169 (251)
T ss_pred             cHHHHHHHHHHHHHHH
Confidence            5788899998887753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.64  E-value=2.2e-15  Score=123.19  Aligned_cols=134  Identities=19%  Similarity=0.174  Sum_probs=89.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ||++++++||||+|+||+++++.|+++|++|+++.|+....   ..+..+.+  ...++..+.+|+++++++.++++   
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG---AEALVAEIGALGGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999998888874311   11111222  13457788999999998887765   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhHHHHHHHH----HHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQVKIIAAI----KEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~~~l~~~~----~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                          ++|++||++|....                   ....++++.+    .+.+ .+++++ |+.......    ....
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~----~~~~  153 (248)
T PRK05557         79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGN----PGQA  153 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCC----CCCc
Confidence                68999999986431                   1123344433    3445 566664 543322111    1245


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+++.
T Consensus       154 ~y~~sk~a~~~~~~~  168 (248)
T PRK05557        154 NYAASKAGVIGFTKS  168 (248)
T ss_pred             hhHHHHHHHHHHHHH
Confidence            688899988876653

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.3e-15  Score=124.59  Aligned_cols=82  Identities=21%  Similarity=0.330  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh-ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF-KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+ ..+ ...++.++.+|++|+++++++++    
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA-----EKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999983     332211 111 13467889999999998877654    


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|++||+||...
T Consensus        78 ~~~id~lv~~ag~~~   92 (263)
T PRK09072         78 MGGINVLINNAGVNH   92 (263)
T ss_pred             cCCCCEEEECCCCCC
Confidence              5899999998753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.3e-15  Score=123.82  Aligned_cols=130  Identities=12%  Similarity=0.109  Sum_probs=84.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchh-hhhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKS-QLLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++++++||||+|+||+++++.|+++|++|++. .|+.     ++. +..+.+.  ..++.++.+|++|++++.++++  
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~   78 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK-----QAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL   78 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH
Confidence            345899999999999999999999999998775 4652     222 1222221  2357789999999999887766  


Q ss_pred             -----------CcCEEEEcCCCccc-------------------hhHHHHHHHHHHh--CCcceee-eccccCCCCcccc
Q 044721           76 -----------QVDVVISTVGHTLL-------------------GDQVKIIAAIKEA--GNIKRFF-PSEFGNDVDRVHA  122 (263)
Q Consensus        76 -----------~~d~vv~~a~~~~~-------------------~~~~~l~~~~~~~--~~~~~~i-~S~~g~~~~~~~~  122 (263)
                                 ++|++||+||....                   ....++++.+...  . .++++ +|+.....    +
T Consensus        79 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~sS~~~~~----~  153 (254)
T PRK12746         79 KNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-EGRVINISSAEVRL----G  153 (254)
T ss_pred             HHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCEEEEECCHHhcC----C
Confidence                       48999999987531                   1123333443332  2 23454 34432211    1


Q ss_pred             CCCCchHHHHHHHHHHHHH
Q 044721          123 VEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus       123 ~~~~~~~~~~k~~~e~~~~  141 (263)
                      ..+...|..+|.+++.+.+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~  172 (254)
T PRK12746        154 FTGSIAYGLSKGALNTMTL  172 (254)
T ss_pred             CCCCcchHhhHHHHHHHHH
Confidence            1225568888888877654

>TIGR02415 23BDH acetoin reductases

Probab=99.64  E-value=3.4e-16  Score=128.70  Aligned_cols=79  Identities=23%  Similarity=0.217  Sum_probs=61.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      |+++|||++|+||+++++.|++.|++|+++.|+...    ..+..+.+.  +.++..+.+|++|++++.++++       
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET----AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999988321    111112221  3357889999999999887764       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      .+|++|||+|..
T Consensus        77 ~id~vi~~ag~~   88 (254)
T TIGR02415        77 GFDVMVNNAGVA   88 (254)
T ss_pred             CCCEEEECCCcC
Confidence            579999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06484 short chain dehydrogenase; Validated

Probab=99.64  E-value=8.2e-16  Score=139.23  Aligned_cols=174  Identities=18%  Similarity=0.228  Sum_probs=111.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+.     ++.+. .+.+ +.++..+.+|++|+++++++++      
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNV-----ERARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999983     33322 2222 3457789999999998887765      


Q ss_pred             -CcCEEEEcCCCccc------hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 -QVDVVISTVGHTLL------GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 -~~d~vv~~a~~~~~------~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                       ++|++|||||....      +....-++.+.+.+                     ....+..+|.....+.++..    
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~l~~~~~~~~~~~~~----  132 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAIN---------------------LTGAYLVAREALRLMIEQGH----  132 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHhcCC----
Confidence             58999999986310      00001111111111                     12334445555544433221    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      -++++++++..             +.....+...|..+|.+...+.+.++.++.+.++++|+|+||+..++.
T Consensus       133 g~~iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        133 GAAIVNVASGA-------------GLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             CCeEEEECCcc-------------cCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence            01344433333             222223344566666666668888889999999999999999765443

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.64  E-value=4.8e-15  Score=119.70  Aligned_cols=128  Identities=20%  Similarity=0.187  Sum_probs=87.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      ++|+++||||+|+||+++++.|+++ ++|++++|+.     ++.+.+... ..++.++++|++|+++++++++   ++|+
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~-----~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~   74 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPA-----ERLDELAAE-LPGATPFPVDLTDPEAIAAAVEQLGRLDV   74 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCH-----HHHHHHHHH-hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence            4679999999999999999999999 9999999983     332222211 2357889999999999999887   5999


Q ss_pred             EEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHH
Q 044721           80 VISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        80 vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~  136 (263)
                      |||++|.....                       ..+.+++.+.+.+ .+.+++|+.....    ...+...|..+|.+.
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~----~~~~~~~y~~~K~a~  149 (227)
T PRK08219         75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLR----ANPGWGSYAASKFAL  149 (227)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcC----cCCCCchHHHHHHHH
Confidence            99999875310                       0234444444444 3333345432211    112256788899988


Q ss_pred             HHHHHH
Q 044721          137 RRAVEA  142 (263)
Q Consensus       137 e~~~~~  142 (263)
                      +.+++.
T Consensus       150 ~~~~~~  155 (227)
T PRK08219        150 RALADA  155 (227)
T ss_pred             HHHHHH
Confidence            876653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.64  E-value=3.4e-15  Score=121.91  Aligned_cols=131  Identities=15%  Similarity=0.158  Sum_probs=89.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|++.     +.+. ...+.  ..++.++.+|++|++++.++++   
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEE-----AAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAV   77 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999842     2221 11121  3457788899999998877765   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhHHHHHHHH----HHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQVKIIAAI----KEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~~~l~~~~----~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                          ++|++||++|....                   ....++++.+    .+.+ .+++++ |+.+...    ...+..
T Consensus        78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~----~~~~~~  152 (246)
T PRK05653         78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT----GNPGQT  152 (246)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc----CCCCCc
Confidence                46999999987531                   1123333333    4556 677774 5543221    122356


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+.+.+.+.
T Consensus       153 ~y~~sk~~~~~~~~~  167 (246)
T PRK05653        153 NYSAAKAGVIGFTKA  167 (246)
T ss_pred             HhHhHHHHHHHHHHH
Confidence            788899888776543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.63  E-value=9.9e-16  Score=125.22  Aligned_cols=79  Identities=19%  Similarity=0.230  Sum_probs=63.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     .++.+.+..  ..++.++.+|+++.+++.++++   ++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARN-----AAALDRLAG--ETGCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HhCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            45799999999999999999999999999999998     333322221  1246778999999999888876   5899


Q ss_pred             EEEcCCCcc
Q 044721           80 VISTVGHTL   88 (263)
Q Consensus        80 vv~~a~~~~   88 (263)
                      +||++|...
T Consensus        81 vi~~ag~~~   89 (245)
T PRK07060         81 LVNCAGIAS   89 (245)
T ss_pred             EEECCCCCC
Confidence            999998753

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.63  E-value=5.6e-16  Score=128.54  Aligned_cols=190  Identities=17%  Similarity=0.118  Sum_probs=111.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc---cCCcEEEEccCCCHHHH----HHHh--
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---KLGVNLVIGDVLNHESL----VKAI--   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~----~~~~--   74 (263)
                      ++++||||+|+||+++++.|+++|++|+++.|+..    ++.+ ..+.+.   ..++..+.+|++|++++    ++++  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~   77 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA----AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDA   77 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHH
Confidence            57999999999999999999999999998876532    1221 112221   23466789999998754    3332  


Q ss_pred             -----cCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC-EE
Q 044721           75 -----KQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP-YT  148 (263)
Q Consensus        75 -----~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~-~~  148 (263)
                           .++|+||||||.......   .+.-...+.....   ..-....+....|...++...+.....+....... -.
T Consensus        78 ~~~~~g~iD~lv~nAG~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~  151 (267)
T TIGR02685        78 CFRAFGRCDVLVNNASAFYPTPL---LRGDAGEGVGDKK---SLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRST  151 (267)
T ss_pred             HHHccCCceEEEECCccCCCCcc---cccccccccccch---hhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCC
Confidence                 369999999996531110   0000000000000   00000000011222445666676665543221100 01


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSA  217 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~  217 (263)
                      .+++.++.+..             +..+......|..+|.+...+.+.++.+++++++++|+|+||+..
T Consensus       152 ~~~iv~~~s~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~  207 (267)
T TIGR02685       152 NLSIVNLCDAM-------------TDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL  207 (267)
T ss_pred             CeEEEEehhhh-------------ccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence            13343333332             233345566899999998889999999999999999999999753

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=1.7e-15  Score=123.80  Aligned_cols=131  Identities=16%  Similarity=0.166  Sum_probs=89.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|+++.|+...    ..+ ..+..  ...++.++.+|++|++++.++++   
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   79 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEE----AAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAV   79 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHH----HHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHH
Confidence            346799999999999999999999999999887776421    111 11111  13467889999999999888764   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhHHHHHH----HHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQVKIIA----AIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~~~l~~----~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                          ++|++||++|....                   ....++.+    .+.+.+ .+++++ |+.+....    .....
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~----~~~~~  154 (249)
T PRK12825         80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPG----WPGRS  154 (249)
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCC----CCCch
Confidence                57999999985421                   11223333    345666 778774 55433211    12256


Q ss_pred             hHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVE  141 (263)
Q Consensus       128 ~~~~~k~~~e~~~~  141 (263)
                      .|..+|.+++.+++
T Consensus       155 ~y~~sK~~~~~~~~  168 (249)
T PRK12825        155 NYAAAKAGLVGLTK  168 (249)
T ss_pred             HHHHHHHHHHHHHH
Confidence            78889998887664

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=2.3e-15  Score=123.85  Aligned_cols=81  Identities=19%  Similarity=0.217  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+....   ..+..+.+.  ..++.++.+|++|++++.++++      
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE---LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhH---HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999874211   111112221  2457889999999998877665      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       .+|++|||+|..
T Consensus        79 ~~id~vi~~ag~~   91 (256)
T PRK12745         79 GRIDCLVNNAGVG   91 (256)
T ss_pred             CCCCEEEECCccC
Confidence             689999999864

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.6e-15  Score=125.16  Aligned_cols=81  Identities=12%  Similarity=0.160  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|+++.++..    +..+ ..+.+  .+.++.++.+|++|.+++.++++    
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSR----DEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999988876532    1111 11221  13457889999999998888765    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        84 ~~~~iD~vi~~ag~~   98 (258)
T PRK09134         84 ALGPITLLVNNASLF   98 (258)
T ss_pred             HcCCCCEEEECCcCC
Confidence               489999999864

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4e-15  Score=121.01  Aligned_cols=131  Identities=17%  Similarity=0.154  Sum_probs=90.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+...    ..+....+...++..+.+|+.|.++++++++       
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAP----LSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHh----HHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998422    1112223334467888999999998887765       


Q ss_pred             CcCEEEEcCCCccc-------------------hhHHHHHHH----HHHhCCcceeee-ccccCCCCccccCCCCchHHH
Q 044721           76 QVDVVISTVGHTLL-------------------GDQVKIIAA----IKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFA  131 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-------------------~~~~~l~~~----~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~  131 (263)
                      ++|+|||++|....                   ....+++++    +.+.+ .+++++ |+......    ..+...|..
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~----~~~~~~y~~  156 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKA----GPGMGAYAA  156 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccC----CCCcchhHH
Confidence            68999999986421                   112233333    34556 777774 65443221    122557888


Q ss_pred             HHHHHHHHHHH
Q 044721          132 TKAKIRRAVEA  142 (263)
Q Consensus       132 ~k~~~e~~~~~  142 (263)
                      +|.+++.+++.
T Consensus       157 sk~a~~~~~~~  167 (239)
T PRK12828        157 AKAGVARLTEA  167 (239)
T ss_pred             HHHHHHHHHHH
Confidence            99888877643

>PRK08264 short chain dehydrogenase; Validated

Probab=99.63  E-value=5.6e-15  Score=120.32  Aligned_cols=126  Identities=17%  Similarity=0.131  Sum_probs=88.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   78 (263)
                      .+++++||||+|+||+++++.|+++|+ +|++++|+..     +.+.    ...++.++.+|++|.++++++++   .+|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~-----~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id   75 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPE-----SVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVT   75 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChh-----hhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            357999999999999999999999998 9999999843     2211    23568889999999999988776   589


Q ss_pred             EEEEcCCCcc--------------------chhHHHHHHH----HHHhCCcceee-eccccCCCCccccCCCCchHHHHH
Q 044721           79 VVISTVGHTL--------------------LGDQVKIIAA----IKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        79 ~vv~~a~~~~--------------------~~~~~~l~~~----~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k  133 (263)
                      +|||++|...                    ......++++    +...+ .++++ +|+.....    +..+...|..+|
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~----~~~~~~~y~~sK  150 (238)
T PRK08264         76 ILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWV----NFPNLGTYSASK  150 (238)
T ss_pred             EEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcc----CCCCchHhHHHH
Confidence            9999999821                    1122334443    33445 56666 45433211    122356788899


Q ss_pred             HHHHHHHHH
Q 044721          134 AKIRRAVEA  142 (263)
Q Consensus       134 ~~~e~~~~~  142 (263)
                      .+++.+.+.
T Consensus       151 ~a~~~~~~~  159 (238)
T PRK08264        151 AAAWSLTQA  159 (238)
T ss_pred             HHHHHHHHH
Confidence            988876643

>PRK05865 hypothetical protein; Provisional

Probab=99.63  E-value=7.2e-15  Score=137.03  Aligned_cols=122  Identities=15%  Similarity=0.229  Sum_probs=102.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|+||||+|+||+++++.|+++|++|++++|+...    .      . ..++.++.+|++|.+++.++++++|+|||+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~----~------~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA   69 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD----S------W-PSSADFIAADIRDATAVESAMTGADVVAHCA   69 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh----h------c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence            589999999999999999999999999999987321    0      0 2357889999999999999999999999999


Q ss_pred             CCcc------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCch
Q 044721           85 GHTL------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHG  156 (263)
Q Consensus        85 ~~~~------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~  156 (263)
                      +...      +..+.++++++.+.+ ++++|+ |+..                  |.++|+++++.++++++.|..+++
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------------------K~aaE~ll~~~gl~~vILRp~~VY  129 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH------------------QPRVEQMLADCGLEWVAVRCALIF  129 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------------------HHHHHHHHHHcCCCEEEEEeceEe
Confidence            8653      345789999999999 888885 5421                  888999999999999999988864

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.4e-15  Score=139.87  Aligned_cols=81  Identities=17%  Similarity=0.315  Sum_probs=65.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     +..+ ..+.+.  +.++.++.+|++|.++++++++   
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG-----EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999983     3322 112221  3467889999999999888776   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|++|||||..
T Consensus       444 ~~~g~id~li~~Ag~~  459 (657)
T PRK07201        444 AEHGHVDYLVNNAGRS  459 (657)
T ss_pred             HhcCCCCEEEECCCCC
Confidence                689999999964

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.9e-15  Score=124.53  Aligned_cols=180  Identities=16%  Similarity=0.181  Sum_probs=118.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +.+++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+ ..+.  ..++..+.+|+++++++.++++   
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV-----ERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999983     333211 2221  2457889999999998888775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC---
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG---  144 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~---  144 (263)
                          ++|++|||+|......    ...-.+.+...+                     ....+...+.....+.+...   
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~~~~~~~~~~  140 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTN---------------------TRGAFFVAQEVAKRMIARAKGAG  140 (258)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhc---------------------chhhHHHHHHHHHHHHhcCCcCC
Confidence                5899999999653211    111122222111                     13445556666555544321   


Q ss_pred             CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          145 IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       145 ~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .....+++++.++..             +.........|..++.....+.+.++.++++.++++|+|.||...++.
T Consensus       141 ~~~~~g~iv~~sS~~-------------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~  203 (258)
T PRK06949        141 NTKPGGRIINIASVA-------------GLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI  203 (258)
T ss_pred             CCCCCeEEEEECccc-------------ccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence            011124444443332             112233455688888887778899999999999999999999765543

>PLN00016 RNA-binding protein; Provisional

Probab=99.62  E-value=5.5e-15  Score=128.61  Aligned_cols=144  Identities=25%  Similarity=0.336  Sum_probs=103.1

Q ss_pred             CCeEEEE----cCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcch---hhhhhhhccCCcEEEEccCCCHHHHHHHh--
Q 044721            4 KSKILFI----GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK---SQLLDHFKKLGVNLVIGDVLNHESLVKAI--   74 (263)
Q Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--   74 (263)
                      +++||||    ||||+||+++++.|+++||+|++++|+........   ......+...+++++.+|+.|   +.+++  
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~  128 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG  128 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence            4789999    99999999999999999999999999854210000   000112223458889999977   33444  


Q ss_pred             cCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee-ccccCCC-------CccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           75 KQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP-SEFGNDV-------DRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~-------~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      .++|+|||+++.. ...+.++++++.+.+ ++++|+ |+.+...       .+..+..|   +. +|..+|.++++.+++
T Consensus       129 ~~~d~Vi~~~~~~-~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p---~~-sK~~~E~~l~~~~l~  202 (378)
T PLN00016        129 AGFDVVYDNNGKD-LDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKP---KA-GHLEVEAYLQKLGVN  202 (378)
T ss_pred             CCccEEEeCCCCC-HHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCC---cc-hHHHHHHHHHHcCCC
Confidence            4799999998753 566889999999999 999885 6543321       11222222   22 899999999999999


Q ss_pred             EEEEeccCch
Q 044721          147 YTYGDVLNHG  156 (263)
Q Consensus       147 ~~~gr~~n~~  156 (263)
                      |++.|..++.
T Consensus       203 ~~ilRp~~vy  212 (378)
T PLN00016        203 WTSFRPQYIY  212 (378)
T ss_pred             eEEEeceeEE
Confidence            9999876543

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.6e-16  Score=130.02  Aligned_cols=78  Identities=14%  Similarity=0.177  Sum_probs=59.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc---cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+.   ......+.+|++|+++++++++     
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDA-----DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA   75 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999883     2222 112221   1224557899999988876654     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|||+|..
T Consensus        76 ~~~id~lv~~ag~~   89 (272)
T PRK07832         76 HGSMDVVMNIAGIS   89 (272)
T ss_pred             cCCCCEEEECCCCC
Confidence              589999999865

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.5e-15  Score=122.29  Aligned_cols=80  Identities=16%  Similarity=0.215  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+.  ..++..+.+|++|+++++++++    
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLA-----AEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999998873     2222 112221  2457889999999999888774    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++||++|..
T Consensus        81 ~~~~id~vi~~ag~~   95 (250)
T PRK12939         81 ALGGLDGLVNNAGIT   95 (250)
T ss_pred             HcCCCCEEEECCCCC
Confidence               689999999974

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.62  E-value=6.3e-15  Score=122.72  Aligned_cols=130  Identities=18%  Similarity=0.164  Sum_probs=85.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .+++++||||+|+||+++++.|+++|++|++++|+..     ..+ ....+.  ..++.++.+|++|.+++.++++    
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVE-----KCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998732     221 111111  2357788999999999887775    


Q ss_pred             ---CcCEEEEcCCCccc-------------------hhHHHHHHH----HHHhCCcceee-eccccCCCCccccCCCCch
Q 044721           76 ---QVDVVISTVGHTLL-------------------GDQVKIIAA----IKEAGNIKRFF-PSEFGNDVDRVHAVEPAKS  128 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-------------------~~~~~l~~~----~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~  128 (263)
                         ++|++|||||....                   ..+.++.+.    +.+.+ ..+++ +||......    ......
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~----~~~~~~  158 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQ----RPHMGA  158 (274)
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCC----CCCcch
Confidence               57999999987531                   112233333    33334 45565 344322111    112456


Q ss_pred             HHHHHHHHHHHHHH
Q 044721          129 AFATKAKIRRAVEA  142 (263)
Q Consensus       129 ~~~~k~~~e~~~~~  142 (263)
                      |..+|.+++.+++.
T Consensus       159 Y~~sK~a~~~l~~~  172 (274)
T PRK07775        159 YGAAKAGLEAMVTN  172 (274)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88888888876653

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2.8e-15  Score=124.16  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++++||||+|+||+++++.|+++|++|++++|+..     ..+ ..+.+.  ..++.++.+|++|+++++++++     
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQE-----KVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999842     222 111221  2356788999999998887765     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|||||..
T Consensus        84 ~~~iD~vi~~ag~~   97 (264)
T PRK07576         84 FGPIDVLVSGAAGN   97 (264)
T ss_pred             cCCCCEEEECCCCC
Confidence              579999999853

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.62  E-value=2.9e-15  Score=122.40  Aligned_cols=131  Identities=21%  Similarity=0.184  Sum_probs=86.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++++||||+|+||+++++.|+++|++|++++|+...   ...+.....  .+.++.++.+|++|.++++++++      
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999988421   111111111  13457889999999998887765      


Q ss_pred             -CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|++||++|....                   ..    .+.+++.+.+.+ .+++++ |+......    ......|.
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~----~~~~~~Y~  153 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKG----QFGQTNYS  153 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccC----CCCChHHH
Confidence             58999999986531                   01    123455555555 566663 44332211    11244677


Q ss_pred             HHHHHHHHHHHH
Q 044721          131 ATKAKIRRAVEA  142 (263)
Q Consensus       131 ~~k~~~e~~~~~  142 (263)
                      .+|.+++.+++.
T Consensus       154 ~sK~a~~~~~~~  165 (245)
T PRK12824        154 AAKAGMIGFTKA  165 (245)
T ss_pred             HHHHHHHHHHHH
Confidence            788777765543

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.61  E-value=3.3e-15  Score=122.63  Aligned_cols=80  Identities=13%  Similarity=0.200  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCc------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQV------   77 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------   77 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+..    +..+.+......++.++.+|++|+++++++++.+      
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN----KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch----HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            368999999999999999999999999999999842    1111111112346788999999999998877532      


Q ss_pred             ---C--EEEEcCCCc
Q 044721           78 ---D--VVISTVGHT   87 (263)
Q Consensus        78 ---d--~vv~~a~~~   87 (263)
                         +  .+|||+|..
T Consensus        77 ~~~~~~~~v~~ag~~   91 (251)
T PRK06924         77 DNVSSIHLINNAGMV   91 (251)
T ss_pred             ccCCceEEEEcceec
Confidence               2  789999864

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.61  E-value=5.2e-15  Score=120.65  Aligned_cols=81  Identities=17%  Similarity=0.253  Sum_probs=59.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCC--HHHHHHHh-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLN--HESLVKAI-   74 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~--~~~~~~~~-   74 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+..     +.+ ..+.+   ....+..+.+|+++  .+++.+++ 
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK-----KLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAA   78 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH-----HHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHH
Confidence            45689999999999999999999999999999999843     222 11221   12346678899975  34444433 


Q ss_pred             -------cCcCEEEEcCCCc
Q 044721           75 -------KQVDVVISTVGHT   87 (263)
Q Consensus        75 -------~~~d~vv~~a~~~   87 (263)
                             ..+|++|||||..
T Consensus        79 ~i~~~~~~~id~vi~~ag~~   98 (239)
T PRK08703         79 TIAEATQGKLDGIVHCAGYF   98 (239)
T ss_pred             HHHHHhCCCCCEEEEecccc
Confidence                   4689999999963

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.6e-14  Score=118.13  Aligned_cols=78  Identities=22%  Similarity=0.220  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+...    ..+.  .. ......+.+|++|.+++++.+.++|++||
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~----~~~~--~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN----NSES--ND-ESPNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh----hhhh--hc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            46899999999999999999999999999999998421    1111  11 11235688999999999999999999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      |||..
T Consensus        86 nAG~~   90 (245)
T PRK12367         86 NHGIN   90 (245)
T ss_pred             CCccC
Confidence            99874

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.61  E-value=2.8e-14  Score=114.28  Aligned_cols=156  Identities=21%  Similarity=0.288  Sum_probs=121.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh--hhhhccCCcEEEEccCCCHHHHHHHhc--CcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL--LDHFKKLGVNLVIGDVLNHESLVKAIK--QVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d   78 (263)
                      ++|++||||-||+-|+.|++.|++.||.|+.+.|+.+..+......  .......++.++.+|++|..++.++++  ++|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            3589999999999999999999999999999999866544443211  122223458899999999999999987  689


Q ss_pred             EEEEcCCCccc---------------hhHHHHHHHHHHhCCc--ceee-ecc---ccC----CCCccccCCCCchHHHHH
Q 044721           79 VVISTVGHTLL---------------GDQVKIIAAIKEAGNI--KRFF-PSE---FGN----DVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        79 ~vv~~a~~~~~---------------~~~~~l~~~~~~~~~~--~~~i-~S~---~g~----~~~~~~~~~~~~~~~~~k  133 (263)
                      -|+|+|+..++               -++.++++++...+ .  -+|+ .|+   ||.    ..++..|..|.++|..+|
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAK  159 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  159 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHH
Confidence            99999998873               24689999999887 4  2344 232   553    236788899999999999


Q ss_pred             HHHHHHH----HHcCCCEEEEeccCchhHH
Q 044721          134 AKIRRAV----EAEGIPYTYGDVLNHGSLV  159 (263)
Q Consensus       134 ~~~e~~~----~~~~~~~~~gr~~n~~~~~  159 (263)
                      ..+..+.    +..|+-.+.|..+|+.|+.
T Consensus       160 lYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         160 LYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             HHHHheeeehHhhcCceeecceeecCCCCC
Confidence            9887665    4668888899999987765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.61  E-value=5.2e-15  Score=121.25  Aligned_cols=80  Identities=16%  Similarity=0.280  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +|+++||||+|+||+.+++.|+++|++|+++.++.    +++.+ ....+.  ..++..+++|++|+++++++++     
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARD----AAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA   77 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999998776442    22221 111121  3468889999999998877664     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|||||..
T Consensus        78 ~~~id~li~~ag~~   91 (248)
T PRK06947         78 FGRLDALVNNAGIV   91 (248)
T ss_pred             cCCCCEEEECCccC
Confidence              689999999864

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.61  E-value=7.8e-15  Score=120.45  Aligned_cols=145  Identities=20%  Similarity=0.212  Sum_probs=88.7

Q ss_pred             EEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhh-hhh------------ccCCcEEEEccCCCH------
Q 044721            9 FIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLL-DHF------------KKLGVNLVIGDVLNH------   67 (263)
Q Consensus         9 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~------------~~~~~~~~~~D~~~~------   67 (263)
                      |||||||+|++++++|++.+.  +|+++.|.+...  ...+.+ +.+            ...++.++.+|++++      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~--~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~   78 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ--SALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSD   78 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH--HHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--H
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc--cchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCCh
Confidence            799999999999999999986  899999985321  111111 111            156899999999874      


Q ss_pred             HHHHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceee-eccccCC---CC-------------
Q 044721           68 ESLVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFF-PSEFGND---VD-------------  118 (263)
Q Consensus        68 ~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~---~~-------------  118 (263)
                      +....+.+++|+|||+|+...            +.+++++++.+.+.. .++++ +|+....   ..             
T Consensus        79 ~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~  157 (249)
T PF07993_consen   79 EDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDD  157 (249)
T ss_dssp             HHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--E
T ss_pred             HHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCccccccccccccc
Confidence            566677789999999999876            567899999998766 55666 4652111   10             


Q ss_pred             ccccCCCCchHHHHHHHHHHHHHH----cCCCEEEEeccCch
Q 044721          119 RVHAVEPAKSAFATKAKIRRAVEA----EGIPYTYGDVLNHG  156 (263)
Q Consensus       119 ~~~~~~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n~~  156 (263)
                      ........++|..||..+|+++++    .|+|+++.|..++.
T Consensus       158 ~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~  199 (249)
T PF07993_consen  158 LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIV  199 (249)
T ss_dssp             EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE
T ss_pred             chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccc
Confidence            011223467899999999999963    38999998876543

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.61  E-value=5.5e-15  Score=121.07  Aligned_cols=80  Identities=11%  Similarity=0.224  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++++||||+|+||++++++|+++|++|++..++.    +++.+ ..+.+.  +.++.++.+|++|.++++++++     
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRN----RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE   77 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC----HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999988776542    22221 112221  2357789999999999888776     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|+||||||..
T Consensus        78 ~~~id~li~~ag~~   91 (248)
T PRK06123         78 LGRLDALVNNAGIL   91 (248)
T ss_pred             hCCCCEEEECCCCC
Confidence              689999999875

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=8.5e-15  Score=120.19  Aligned_cols=84  Identities=17%  Similarity=0.162  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||++++++|+++|++|++..|+...........+... +.++..+.+|+++++++.++++       
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999887765321101111111111 2356778999999998877765       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|+|||+||..
T Consensus        84 ~~d~vi~~ag~~   95 (252)
T PRK06077         84 VADILVNNAGLG   95 (252)
T ss_pred             CCCEEEECCCCC
Confidence            689999999963

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.60  E-value=7.3e-15  Score=120.38  Aligned_cols=135  Identities=11%  Similarity=0.050  Sum_probs=83.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC--CHHHHHHHh-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL--NHESLVKAI-----   74 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~-----   74 (263)
                      +++++++||||+|+||.++++.|++.|++|++++|+.... ....+.+......++.++.+|++  +.+++.+++     
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-EAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999984211 01111112222235677788886  555554443     


Q ss_pred             --cCcCEEEEcCCCccc--------------------hhHH----HHHHHHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           75 --KQVDVVISTVGHTLL--------------------GDQV----KIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        75 --~~~d~vv~~a~~~~~--------------------~~~~----~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                        .++|+|||+||....                    ....    .+++.+.+.+ .+++++ |+......    .....
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~----~~~~~  163 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQG----RANWG  163 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCC----CCCCc
Confidence              368999999986421                    1122    2333334455 566663 54322111    11245


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+++.
T Consensus       164 ~Y~~sK~a~~~~~~~  178 (247)
T PRK08945        164 AYAVSKFATEGMMQV  178 (247)
T ss_pred             ccHHHHHHHHHHHHH
Confidence            678888887776543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.60  E-value=1.2e-14  Score=119.49  Aligned_cols=129  Identities=16%  Similarity=0.146  Sum_probs=87.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh--ccCCcEEEEccCCCHHHHHHHh------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF--KKLGVNLVIGDVLNHESLVKAI------   74 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~~~~------   74 (263)
                      ++++|||||+|+||+++++.|+++|++|++++|+.     +..+.+ ..+  ...++.++.+|++|.+++++++      
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE-----AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE   75 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999983     222221 111  1345788999999999665544      


Q ss_pred             -cCcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchH
Q 044721           75 -KQVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        75 -~~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~  129 (263)
                       .++|+|||+++....                   ..    .+.+++.+.+.+ ++++++ |+......    ......|
T Consensus        76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~----~~~~~~y  150 (255)
T TIGR01963        76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVA----SPFKSAY  150 (255)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCC----CCCCchh
Confidence             468999999986431                   01    123344445666 777774 54322111    1124568


Q ss_pred             HHHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVEA  142 (263)
Q Consensus       130 ~~~k~~~e~~~~~  142 (263)
                      ..+|.+++.+++.
T Consensus       151 ~~sk~a~~~~~~~  163 (255)
T TIGR01963       151 VAAKHGLIGLTKV  163 (255)
T ss_pred             HHHHHHHHHHHHH
Confidence            8899988877653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8.9e-15  Score=119.03  Aligned_cols=81  Identities=22%  Similarity=0.280  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhcc-CCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKK-LGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++++++||||+|+||++++++|++.|++|++++|++     .+.+ ..+.+.. .++.++++|++|.+++.++++     
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ-----KELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH-----HHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999999999999984     3322 1222211 467889999999998887775     


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|+|||++|...
T Consensus        80 ~~~~d~vi~~ag~~~   94 (237)
T PRK07326         80 FGGLDVLIANAGVGH   94 (237)
T ss_pred             cCCCCEEEECCCCCC
Confidence              6899999998653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.60  E-value=3.3e-15  Score=122.35  Aligned_cols=83  Identities=23%  Similarity=0.308  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhcC--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIKQ--   76 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--   76 (263)
                      +++++++||||+|+||++++++|+++|++|+++.++.    ++..+ ..+.+.  +.++.++.+|++|++++.++++.  
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSS----KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAV   79 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCc----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999998765542    11211 222221  23578899999999998887764  


Q ss_pred             -----cCEEEEcCCCcc
Q 044721           77 -----VDVVISTVGHTL   88 (263)
Q Consensus        77 -----~d~vv~~a~~~~   88 (263)
                           +|+||||||...
T Consensus        80 ~~~~~id~vi~~ag~~~   96 (247)
T PRK12935         80 NHFGKVDILVNNAGITR   96 (247)
T ss_pred             HHcCCCCEEEECCCCCC
Confidence                 799999999753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.60  E-value=2.5e-15  Score=139.23  Aligned_cols=81  Identities=16%  Similarity=0.214  Sum_probs=64.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh----ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF----KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     +..+.. +.+    ...++..+++|++|+++++++++  
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~-----~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i  487 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNL-----EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV  487 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCH-----HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999984     222211 111    12346788999999999988776  


Q ss_pred             -----CcCEEEEcCCCcc
Q 044721           76 -----QVDVVISTVGHTL   88 (263)
Q Consensus        76 -----~~d~vv~~a~~~~   88 (263)
                           ++|++|||||...
T Consensus       488 ~~~~g~iDilV~nAG~~~  505 (676)
T TIGR02632       488 ALAYGGVDIVVNNAGIAT  505 (676)
T ss_pred             HHhcCCCcEEEECCCCCC
Confidence                 6899999999753

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.59  E-value=1.6e-14  Score=115.65  Aligned_cols=147  Identities=21%  Similarity=0.324  Sum_probs=106.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++|+||||.||||+||++.|..+|++|++++--...   .+.+.......++++.+.-|+..+     ++..+|-|+|
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg---~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~Iyh   97 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTG---RKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYH   97 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccccc---chhhcchhccCcceeEEEeechhH-----HHHHhhhhhh
Confidence            35799999999999999999999999999998854321   111111222345677777777654     6778999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeec---cccCCCCc---------cccCCCCchHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPS---EFGNDVDR---------VHAVEPAKSAFATKAK  135 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S---~~g~~~~~---------~~~~~~~~~~~~~k~~  135 (263)
                      +|++..               ..++.+.+-.|++.+ .+.++.|   .||.+...         ..+..|...|...|..
T Consensus        98 LAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~  176 (350)
T KOG1429|consen   98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRV  176 (350)
T ss_pred             hccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHH
Confidence            998765               345678888888887 4545555   37765321         2344567889999999


Q ss_pred             HHHHH----HHcCCCEEEEeccCchhH
Q 044721          136 IRRAV----EAEGIPYTYGDVLNHGSL  158 (263)
Q Consensus       136 ~e~~~----~~~~~~~~~gr~~n~~~~  158 (263)
                      +|.++    ++.|++..++|++|..++
T Consensus       177 aE~L~~~y~k~~giE~rIaRifNtyGP  203 (350)
T KOG1429|consen  177 AETLCYAYHKQEGIEVRIARIFNTYGP  203 (350)
T ss_pred             HHHHHHHhhcccCcEEEEEeeecccCC
Confidence            99999    466999999999996543

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.8e-14  Score=118.82  Aligned_cols=81  Identities=20%  Similarity=0.282  Sum_probs=63.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+.+++.|+++|++ |++++|+..     +.+ ..+.+.  ..++.++.+|+++++++.++++  
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAE-----KGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAA   78 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHH-----HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999 999998732     221 112221  2356778999999998887765  


Q ss_pred             -----CcCEEEEcCCCc
Q 044721           76 -----QVDVVISTVGHT   87 (263)
Q Consensus        76 -----~~d~vv~~a~~~   87 (263)
                           ++|++||++|..
T Consensus        79 ~~~~g~id~li~~ag~~   95 (260)
T PRK06198         79 DEAFGRLDALVNAAGLT   95 (260)
T ss_pred             HHHhCCCCEEEECCCcC
Confidence                 589999999865

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=8.1e-15  Score=119.86  Aligned_cols=131  Identities=16%  Similarity=0.170  Sum_probs=87.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++++++||||+|+||+++++.|+++|++|+++ .|+.     ++.+ ....+  ...++.++.+|++|++++.++++  
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE-----EAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQI   77 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            356799999999999999999999999999998 8873     2222 11111  13457889999999999887775  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hhHHHHH----HHHHHhCCcceee-eccccCCCCccccCCCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GDQVKII----AAIKEAGNIKRFF-PSEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~~~~l~----~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~  126 (263)
                           ++|+|||++|....                   ....+++    +.+.+.+ .++++ +|+.......    ...
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~----~~~  152 (247)
T PRK05565         78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGA----SCE  152 (247)
T ss_pred             HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCC----CCc
Confidence                 79999999987531                   1112233    3333444 45565 3543321111    114


Q ss_pred             chHHHHHHHHHHHHHH
Q 044721          127 KSAFATKAKIRRAVEA  142 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~  142 (263)
                      ..|..+|.+.+.+++.
T Consensus       153 ~~y~~sK~a~~~~~~~  168 (247)
T PRK05565        153 VLYSASKGAVNAFTKA  168 (247)
T ss_pred             cHHHHHHHHHHHHHHH
Confidence            5688888887776543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.59  E-value=6.2e-15  Score=121.02  Aligned_cols=174  Identities=19%  Similarity=0.156  Sum_probs=114.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhcc----CCcEEEEccCCC-HHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKK----LGVNLVIGDVLN-HESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~-~~~~~~~~~   75 (263)
                      |+++++++||||+++||.++++.|+++|+.|+++.|+....   ..+.+.....    ..+.....|+++ .++++.+++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE---AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh---hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHH
Confidence            45689999999999999999999999999998888874321   1111111112    356777899998 888776664


Q ss_pred             -------CcCEEEEcCCCccch-h----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           76 -------QVDVVISTVGHTLLG-D----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        76 -------~~d~vv~~a~~~~~~-~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                             ++|++|||||..... .    ...-++.+.+.+                     ....+..++ ...+++++.
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n---------------------~~g~~~~~~-~~~~~~~~~  136 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVN---------------------LLGAFLLTR-AALPLMKKQ  136 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHh---------------------HHHHHHHHH-HHHHhhhhC
Confidence                   589999999975321 1    111222222221                     123444455 444444422


Q ss_pred             CCCEEEEeccCchhHHHHhcccceEEEecCcccchh-HHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          144 GIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLAD-QVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       144 ~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                             +++|.++..             +. .... ...|..+|.+...+++.++.++.+.+|++|+|.||...++.
T Consensus       137 -------~Iv~isS~~-------------~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         137 -------RIVNISSVA-------------GL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             -------eEEEECCch-------------hc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence                   555555554             22 2222 47788888888778888998999999999999999655443

>PLN02996 fatty acyl-CoA reductase

Probab=99.59  E-value=5.1e-14  Score=125.93  Aligned_cols=154  Identities=19%  Similarity=0.240  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEEcCCCCCCcc-hh--hhhh----------------hhccCCcEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPS-KS--QLLD----------------HFKKLGVNLV   60 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~-~~--~~~~----------------~~~~~~~~~~   60 (263)
                      ++|+|+|||||||+|+++++.|++.+.   +|+++.|.+...... +.  +...                .....++.++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            578999999999999999999998653   589999986532111 11  1100                0011578999


Q ss_pred             EccCC-------CHHHHHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHh-CCcceeee-cc---ccCC
Q 044721           61 IGDVL-------NHESLVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEA-GNIKRFFP-SE---FGND  116 (263)
Q Consensus        61 ~~D~~-------~~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~-~~~~~~i~-S~---~g~~  116 (263)
                      .+|++       +.+.++++++++|+|||+|+...            +.++.++++++.+. + ++++++ |+   ||..
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~k~~V~vST~~vyG~~  168 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVK-VKMLLHVSTAYVCGEK  168 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeeeEEecCC
Confidence            99998       44557788899999999998754            34578899999886 5 888774 43   4432


Q ss_pred             CC---c-c----c-----------------------------------------------cCCCCchHHHHHHHHHHHHH
Q 044721          117 VD---R-V----H-----------------------------------------------AVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus       117 ~~---~-~----~-----------------------------------------------~~~~~~~~~~~k~~~e~~~~  141 (263)
                      ..   + .    .                                               ...+.+.|..+|+.+|++++
T Consensus       169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~  248 (491)
T PLN02996        169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG  248 (491)
T ss_pred             CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence            10   0 0    0                                               01134679999999999997


Q ss_pred             H--cCCCEEEEeccCchh
Q 044721          142 A--EGIPYTYGDVLNHGS  157 (263)
Q Consensus       142 ~--~~~~~~~gr~~n~~~  157 (263)
                      +  .++|.++.|..++.+
T Consensus       249 ~~~~~lpv~i~RP~~V~G  266 (491)
T PLN02996        249 NFKENLPLVIIRPTMITS  266 (491)
T ss_pred             HhcCCCCEEEECCCEecc
Confidence            5  489999999888644

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.58  E-value=1.6e-14  Score=117.42  Aligned_cols=73  Identities=26%  Similarity=0.342  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh---cCcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI---KQVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d~   79 (263)
                      |+++||||+|+||++++++|+++|  +.|+...|+...          .....++.++++|++|.++++++.   .++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            589999999999999999999986  455555565321          011346788999999998877654   47999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|||+|..
T Consensus        71 li~~aG~~   78 (235)
T PRK09009         71 LINCVGML   78 (235)
T ss_pred             EEECCccc
Confidence            99999976

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.58  E-value=1.6e-14  Score=117.78  Aligned_cols=128  Identities=23%  Similarity=0.252  Sum_probs=83.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |+++||||+|+||+++++.|+++|++|+++.|..    +...+ .....  ...++.++.+|++|+++++++++      
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPN----EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL   76 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999988832    22211 11111  13467889999999988877664      


Q ss_pred             -CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|+||||+|....                   ..    .+.+++.+.+.+ .+++++ |+......    ......|.
T Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~----~~~~~~y~  151 (242)
T TIGR01829        77 GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKG----QFGQTNYS  151 (242)
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC----CCCcchhH
Confidence             58999999986421                   11    123445555555 666653 44321111    11245677


Q ss_pred             HHHHHHHHHHH
Q 044721          131 ATKAKIRRAVE  141 (263)
Q Consensus       131 ~~k~~~e~~~~  141 (263)
                      .+|.+++.+++
T Consensus       152 ~sk~a~~~~~~  162 (242)
T TIGR01829       152 AAKAGMIGFTK  162 (242)
T ss_pred             HHHHHHHHHHH
Confidence            78877776554

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.58  E-value=5.9e-14  Score=121.21  Aligned_cols=149  Identities=15%  Similarity=0.204  Sum_probs=103.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCC-cchhh-hhhhh-------ccCCcEEEEccCCCH------H
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSA-PSKSQ-LLDHF-------KKLGVNLVIGDVLNH------E   68 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~-~~~~~-------~~~~~~~~~~D~~~~------~   68 (263)
                      +|+||||||+||+++++.|+++|  ++|+++.|+..... .++.+ .....       ...++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  67999999853210 00111 01100       004688999999753      5


Q ss_pred             HHHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCCC-------ccc-----cC
Q 044721           69 SLVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVD-------RVH-----AV  123 (263)
Q Consensus        69 ~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~-------~~~-----~~  123 (263)
                      ....+.+++|+|||+|+...            +..+.++++.+.+.+ ++++++ |+.+....       +..     ..
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~  159 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPP  159 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCcccccccccccc
Confidence            66777789999999998643            345688899998888 887764 55432211       111     11


Q ss_pred             CCCchHHHHHHHHHHHHHH---cCCCEEEEeccCc
Q 044721          124 EPAKSAFATKAKIRRAVEA---EGIPYTYGDVLNH  155 (263)
Q Consensus       124 ~~~~~~~~~k~~~e~~~~~---~~~~~~~gr~~n~  155 (263)
                      .+.+.|..+|..+|.++++   .++++++.|..++
T Consensus       160 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v  194 (367)
T TIGR01746       160 GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRI  194 (367)
T ss_pred             ccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCce
Confidence            2246799999999999864   3899988776554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK08017 oxidoreductase; Provisional

Probab=99.58  E-value=2e-14  Score=118.34  Aligned_cols=124  Identities=18%  Similarity=0.211  Sum_probs=88.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------   75 (263)
                      +++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.   ..++..+++|++|.+++.++++        
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRK-----PDDVARMN---SLGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHhHHHH---hCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999998     33333222   2357889999999888766553        


Q ss_pred             CcCEEEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccc-cCCCCccccCCCCchHH
Q 044721           76 QVDVVISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEF-GNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~-g~~~~~~~~~~~~~~~~  130 (263)
                      ++|.+||++|.....                       ..+.+++.+.+.+ .+++++ |+. +...     ......|.
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~-----~~~~~~Y~  147 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIS-----TPGRGAYA  147 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccC-----CCCccHHH
Confidence            468999999864210                       1123567777777 777764 543 3211     12256799


Q ss_pred             HHHHHHHHHHH
Q 044721          131 ATKAKIRRAVE  141 (263)
Q Consensus       131 ~~k~~~e~~~~  141 (263)
                      .+|..++.+.+
T Consensus       148 ~sK~~~~~~~~  158 (256)
T PRK08017        148 ASKYALEAWSD  158 (256)
T ss_pred             HHHHHHHHHHH
Confidence            99999988764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.57  E-value=7.4e-14  Score=118.36  Aligned_cols=139  Identities=16%  Similarity=0.151  Sum_probs=97.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcCEEE
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVDVVI   81 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vv   81 (263)
                      ||||||||+||+++++.|.+.|+ +|++++|....   .+.   ..+   ....+..|+.+.+.++.+.+    ++|+||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~---~~~---~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG---HKF---LNL---ADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc---hhh---hhh---hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            68999999999999999999997 68887765321   111   111   11346778888887777654    899999


Q ss_pred             EcCCCcc-------------chhHHHHHHHHHHhCCcceeeecc---ccCCC---Cccc-cCCCCchHHHHHHHHHHHHH
Q 044721           82 STVGHTL-------------LGDQVKIIAAIKEAGNIKRFFPSE---FGNDV---DRVH-AVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        82 ~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~~---~~~~-~~~~~~~~~~~k~~~e~~~~  141 (263)
                      |+|+...             +..+.++++++.+.+ ++.++.|+   |+...   .++. +..|.+.|+.+|..+|.+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            9998643             244678999999988 75444454   43221   1222 23467889999999999886


Q ss_pred             H------cCCCEEEEeccCc
Q 044721          142 A------EGIPYTYGDVLNH  155 (263)
Q Consensus       142 ~------~~~~~~~gr~~n~  155 (263)
                      +      .++++++.|+.+.
T Consensus       151 ~~~~~~~~~~~~~~lR~~~v  170 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNV  170 (314)
T ss_pred             HHhHhhccCCceEEEEEeec
Confidence            4      2567887776553

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.2e-14  Score=116.19  Aligned_cols=75  Identities=19%  Similarity=0.213  Sum_probs=60.5

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc-cCCcEEEEccCCCHHHHHHHhc---CcCEEEE
Q 044721            8 LFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK-KLGVNLVIGDVLNHESLVKAIK---QVDVVIS   82 (263)
Q Consensus         8 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~~d~vv~   82 (263)
                      +||||+|+||+++++.|+++|++|++++|+.     ++.+. ...+. ..+++++.+|++|+++++++++   ++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSR-----DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence            6999999999999999999999999999983     23221 11121 3457889999999999998886   4799999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      ++|..
T Consensus        76 ~ag~~   80 (230)
T PRK07041         76 TAADT   80 (230)
T ss_pred             CCCCC
Confidence            99864

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.57  E-value=4.6e-14  Score=119.78  Aligned_cols=80  Identities=14%  Similarity=0.240  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++++++||||+++||+++++.|+++| ++|++++|+.     ++.+ ..+.+.  ..++..+.+|++|.++++++++   
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   76 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDF-----LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFR   76 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCH-----HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            36799999999999999999999999 9999999983     2222 112221  2356788999999998877653   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|++|||||..
T Consensus        77 ~~~~~iD~lI~nAG~~   92 (314)
T TIGR01289        77 ESGRPLDALVCNAAVY   92 (314)
T ss_pred             HhCCCCCEEEECCCcc
Confidence                589999999963

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.7e-15  Score=117.60  Aligned_cols=64  Identities=33%  Similarity=0.428  Sum_probs=55.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vv   81 (263)
                      |+++||||+|+||+++++.|+++ ++|++++|+..                   .+++|++|+++++++++   ++|++|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv   60 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV   60 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence            47999999999999999999999 99999998721                   35789999999988876   789999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      ||||...
T Consensus        61 ~~ag~~~   67 (199)
T PRK07578         61 SAAGKVH   67 (199)
T ss_pred             ECCCCCC
Confidence            9999653

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.56  E-value=4.1e-14  Score=109.93  Aligned_cols=83  Identities=20%  Similarity=0.282  Sum_probs=62.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEE-cCCCCCCcchhhhhhh--hccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLV-RESTLSAPSKSQLLDH--FKKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |.++.++||||+++||..++++|++. |.++++.. |+++.+    .+.++.  ...+++++++.|+++.+++.++.+  
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a----~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V   76 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA----ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEV   76 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh----hHHHHHhhccCCceEEEEEecccHHHHHHHHHHH
Confidence            55678999999999999999999975 55555544 553321    222222  236789999999999988887764  


Q ss_pred             -------CcCEEEEcCCCcc
Q 044721           76 -------QVDVVISTVGHTL   88 (263)
Q Consensus        76 -------~~d~vv~~a~~~~   88 (263)
                             ++|.++||||...
T Consensus        77 ~~iVg~~GlnlLinNaGi~~   96 (249)
T KOG1611|consen   77 EKIVGSDGLNLLINNAGIAL   96 (249)
T ss_pred             HhhcccCCceEEEeccceee
Confidence                   6899999999874

>PRK08324 short chain dehydrogenase; Validated

Probab=99.56  E-value=3.2e-14  Score=132.42  Aligned_cols=81  Identities=20%  Similarity=0.218  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      .+++++||||+|+||+++++.|+++|++|++++|+.     +..+.. ..+.. .++..+.+|++|+++++++++     
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~-----~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDE-----EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCH-----HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999984     333221 22211 367889999999998887765     


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|++|||||...
T Consensus       496 ~g~iDvvI~~AG~~~  510 (681)
T PRK08324        496 FGGVDIVVSNAGIAI  510 (681)
T ss_pred             cCCCCEEEECCCCCC
Confidence              6899999999643

>PLN02778 3,5-epimerase/4-reductase

Probab=99.56  E-value=8e-14  Score=117.37  Aligned_cols=113  Identities=19%  Similarity=0.187  Sum_probs=82.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      .|+||||||+||||++++++|+++|++|+...+                          |+.|.+.+...++  ++|+||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEE
Confidence            478999999999999999999999999875322                          2334445555555  789999


Q ss_pred             EcCCCcc------------------chhHHHHHHHHHHhCCcceeeecc---ccCC----------CCccccCC-CCchH
Q 044721           82 STVGHTL------------------LGDQVKIIAAIKEAGNIKRFFPSE---FGND----------VDRVHAVE-PAKSA  129 (263)
Q Consensus        82 ~~a~~~~------------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~----------~~~~~~~~-~~~~~  129 (263)
                      |+|+...                  +..+.++++++.+.+ ++++++|+   |+..          ..++.+.. +.+.|
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            9998652                  224679999999999 98877642   3321          12233333 44789


Q ss_pred             HHHHHHHHHHHHHc
Q 044721          130 FATKAKIRRAVEAE  143 (263)
Q Consensus       130 ~~~k~~~e~~~~~~  143 (263)
                      +.+|.+.|.+++..
T Consensus       142 g~sK~~~E~~~~~y  155 (298)
T PLN02778        142 SKTKAMVEELLKNY  155 (298)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=1.7e-14  Score=118.82  Aligned_cols=86  Identities=12%  Similarity=0.079  Sum_probs=63.0

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCC-------Ccchhhhhhhhc--cCCcEEEEccCCCHHHH
Q 044721            2 ASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLS-------APSKSQLLDHFK--KLGVNLVIGDVLNHESL   70 (263)
Q Consensus         2 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   70 (263)
                      +++++++||||+|  +||+++++.|+++|++|++++|++...       ..+.......+.  +.++.++.+|+++.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            3568999999995  899999999999999999999873211       011111111111  34578899999999988


Q ss_pred             HHHhc-------CcCEEEEcCCCc
Q 044721           71 VKAIK-------QVDVVISTVGHT   87 (263)
Q Consensus        71 ~~~~~-------~~d~vv~~a~~~   87 (263)
                      +++++       ++|+|||+||..
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~  106 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYS  106 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcC
Confidence            77664       589999999864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.56  E-value=5.9e-14  Score=118.55  Aligned_cols=125  Identities=18%  Similarity=0.167  Sum_probs=94.0

Q ss_pred             EEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEEcCC
Q 044721            8 LFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVISTVG   85 (263)
Q Consensus         8 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~~a~   85 (263)
                      ||||||||||+++++.|++.|++|+++.+.                      ..+|++|.+++.++++  ++|+|||+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKEKPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence            699999999999999999999988765433                      1479999999999887  5799999997


Q ss_pred             Ccc----------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccc----cCCCCc-hHHHHHHHH
Q 044721           86 HTL----------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVH----AVEPAK-SAFATKAKI  136 (263)
Q Consensus        86 ~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~----~~~~~~-~~~~~k~~~  136 (263)
                      ...                ...+.++++++.+.+ ++++|+ |+   |+..    .+|+.    +..|.+ .|..+|...
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            532                224678999999999 888874 54   4322    12222    334444 489999999


Q ss_pred             HHHHH----HcCCCEEEEeccCc
Q 044721          137 RRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       137 e~~~~----~~~~~~~~gr~~n~  155 (263)
                      |++++    ..++++++.|+.+.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~v  160 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNL  160 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecce
Confidence            98764    46899998886654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.56  E-value=2.6e-14  Score=118.22  Aligned_cols=80  Identities=19%  Similarity=0.310  Sum_probs=63.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++++||||+|+||+++++.|+++|++|++++|+.     .+.+ ..+.+.  ..++.++.+|++|.++++++++     
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   75 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNE-----TRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR   75 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999983     2222 112221  3457788999999999888776     


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|++|||+|...
T Consensus        76 ~~~id~vi~~ag~~~   90 (263)
T PRK06181         76 FGGIDILVNNAGITM   90 (263)
T ss_pred             cCCCCEEEECCCccc
Confidence              6899999998653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.55  E-value=2e-14  Score=117.59  Aligned_cols=79  Identities=14%  Similarity=0.188  Sum_probs=60.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++++||||+|+||+++++.|+++|++|++.. |+.     ++.+ ....+.  +.++..+.+|++|+++++++++    
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   75 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL-----HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ   75 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh-----HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999998754 542     2211 112221  2357789999999999888776    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|++||++|..
T Consensus        76 ~~~~id~vi~~ag~~   90 (247)
T PRK09730         76 HDEPLAALVNNAGIL   90 (247)
T ss_pred             hCCCCCEEEECCCCC
Confidence               478999999964

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=2e-14  Score=106.92  Aligned_cols=174  Identities=16%  Similarity=0.161  Sum_probs=112.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++-+.+||||..++|++.+++|++.|..|++++-..++-    .+..+++ +.++.+...|++++.++..++.       
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg----~~vakel-g~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKG----ADVAKEL-GGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc----hHHHHHh-CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            456799999999999999999999999999999874321    1122333 6788999999999999888775       


Q ss_pred             CcCEEEEcCCCccchhHHHHHHH--HHHhCCcceee----ec----------cccCCCCccccCCCCchHHHHHHHHHHH
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAA--IKEAGNIKRFF----PS----------EFGNDVDRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~--~~~~~~~~~~i----~S----------~~g~~~~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      +.|.++||||......+.++-+.  -.-.. .++++    ..          -+|.++..                    
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~led-fqrvidvn~~gtfnvirl~aglmg~nepd--------------------  141 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLED-FQRVIDVNVLGTFNVIRLGAGLMGENEPD--------------------  141 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHH-hhheeeeeeeeeeeeeeehhhhhcCCCCC--------------------
Confidence            68999999998751111110000  00000 22222    01          11111100                    


Q ss_pred             HHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          140 VEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       140 ~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                        +.|.   -|-++|..+..             ...+-.++..|.+++.+...++--++.+++.++||+|.|+||...++
T Consensus       142 --q~gq---rgviintasva-------------afdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tp  203 (260)
T KOG1199|consen  142 --QNGQ---RGVIINTASVA-------------AFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP  203 (260)
T ss_pred             --CCCc---ceEEEeeceee-------------eecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCCh
Confidence              0000   02222222222             33455678899999999888999999999999999999999965544


Q ss_pred             c
Q 044721          220 T  220 (263)
Q Consensus       220 ~  220 (263)
                      .
T Consensus       204 l  204 (260)
T KOG1199|consen  204 L  204 (260)
T ss_pred             h
Confidence            3

>PRK12320 hypothetical protein; Provisional

Probab=99.54  E-value=1.4e-13  Score=125.98  Aligned_cols=127  Identities=17%  Similarity=0.167  Sum_probs=97.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+||||||+||||+++++.|+++|++|++++|.+..     .      ...+++++.+|++|+. +.++++++|+|||+|
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-----~------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA   68 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-----A------LDPRVDYVCASLRNPV-LQELAGEADAVIHLA   68 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-----c------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence            489999999999999999999999999999987321     1      1246788999999985 788889999999999


Q ss_pred             CCcc-------chhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchh
Q 044721           85 GHTL-------LGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGS  157 (263)
Q Consensus        85 ~~~~-------~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~  157 (263)
                      +...       +..+.++++++.+.+ ++.++.|+...  +       ...|.    ..|.++...++++++.|+.|.++
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~G-vRiV~~SS~~G--~-------~~~~~----~aE~ll~~~~~p~~ILR~~nVYG  134 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAG-ARLLFVSQAAG--R-------PELYR----QAETLVSTGWAPSLVIRIAPPVG  134 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcC-CeEEEEECCCC--C-------Ccccc----HHHHHHHhcCCCEEEEeCceecC
Confidence            8642       345789999999999 85444454321  0       01122    47778888889999999888654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.54  E-value=1.4e-13  Score=115.25  Aligned_cols=149  Identities=17%  Similarity=0.210  Sum_probs=107.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCC-cchhhh-h------hhhccCCcEEEEccCC------CHHH
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSA-PSKSQL-L------DHFKKLGVNLVIGDVL------NHES   69 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~-~------~~~~~~~~~~~~~D~~------~~~~   69 (263)
                      +++++||||||+|++++.+|+.+- .+|+++.|..+... .++++. .      ++....+++++.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999875 59999999854211 112221 1      1133567999999998      4566


Q ss_pred             HHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceee-eccccCCC---------Ccc-------
Q 044721           70 LVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFF-PSEFGNDV---------DRV-------  120 (263)
Q Consensus        70 ~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~---------~~~-------  120 (263)
                      ..++.+.+|.||||++..+            +.++.++++.+.... .|.++ +|+.+...         +..       
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~  159 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRN  159 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccccccccc
Confidence            7778889999999999876            556889999888877 77665 46543321         111       


Q ss_pred             ccCCCCchHHHHHHHHHHHHHH---cCCCEEEEeccC
Q 044721          121 HAVEPAKSAFATKAKIRRAVEA---EGIPYTYGDVLN  154 (263)
Q Consensus       121 ~~~~~~~~~~~~k~~~e~~~~~---~~~~~~~gr~~n  154 (263)
                      ....+.++|..||..+|.++++   .|+|.++.|...
T Consensus       160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~  196 (382)
T COG3320         160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGY  196 (382)
T ss_pred             ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCe
Confidence            2223468999999999999964   489999887544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=9.9e-15  Score=122.47  Aligned_cols=177  Identities=12%  Similarity=-0.031  Sum_probs=102.0

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCC------CCCCcchhhhh--------------hhhc--cCCcE
Q 044721            3 SKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRES------TLSAPSKSQLL--------------DHFK--KLGVN   58 (263)
Q Consensus         3 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~~~~~~~--------------~~~~--~~~~~   58 (263)
                      ++|+++|||++  .+||+++++.|+++|++|++.+|.+      ...+..+....              ..+.  -...+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            47899999995  9999999999999999999976531      00000000000              0000  00112


Q ss_pred             EEEccCCC--------HHHHHHHh-------cCcCEEEEcCCCcc--chhH----HHHHHHHHHhCCcceeeeccccCCC
Q 044721           59 LVIGDVLN--------HESLVKAI-------KQVDVVISTVGHTL--LGDQ----VKIIAAIKEAGNIKRFFPSEFGNDV  117 (263)
Q Consensus        59 ~~~~D~~~--------~~~~~~~~-------~~~d~vv~~a~~~~--~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~  117 (263)
                      .+..|+.+        .+++++++       .++|++|||||...  ....    .+-++.+.+                
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~----------------  150 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALS----------------  150 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHH----------------
Confidence            22222222        12344443       36999999998532  1110    111111111                


Q ss_pred             CccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhH-HHHHHHHHhcCCceee
Q 044721          118 DRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQ-VKIIAAIKEAGNVKRF  196 (263)
Q Consensus       118 ~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  196 (263)
                           .|....+..+|.....+. +.      |++.|+++..             +....... ..|..+|.+...++++
T Consensus       151 -----vNl~g~~~l~~a~~p~m~-~~------G~ii~iss~~-------------~~~~~p~~~~~Y~asKaAl~~lt~~  205 (299)
T PRK06300        151 -----TSSYSFVSLLSHFGPIMN-PG------GSTISLTYLA-------------SMRAVPGYGGGMSSAKAALESDTKV  205 (299)
T ss_pred             -----HHhHHHHHHHHHHHHHhh-cC------CeEEEEeehh-------------hcCcCCCccHHHHHHHHHHHHHHHH
Confidence                 122445666777766653 22      4455544433             22122222 3688899998889999


Q ss_pred             ccCCCCC-CccccccCCCCCcchhc
Q 044721          197 FPSEFGN-DVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       197 ~~~~~~~-~~~~vn~v~pg~~~~~~  220 (263)
                      ++.|++. .+||||+|+||+..++.
T Consensus       206 la~el~~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        206 LAWEAGRRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             HHHHhCCCCCeEEEEEEeCCccChh
Confidence            9999987 59999999999876654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=3.6e-14  Score=126.26  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+..   .+..+.+..  ..+...+.+|++|.++++++++       
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~---~~~l~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA---GEALAAVAN--RVGGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc---HHHHHHHHH--HcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999988532   112211111  1234678899999998877765       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|+||||||...
T Consensus       284 ~id~vi~~AG~~~  296 (450)
T PRK08261        284 GLDIVVHNAGITR  296 (450)
T ss_pred             CCCEEEECCCcCC
Confidence            5899999999653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.52  E-value=5e-13  Score=107.76  Aligned_cols=76  Identities=20%  Similarity=0.269  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----CcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----QVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   78 (263)
                      |++++||||+|+||+++++.|++.|++|++++|+.     ++.+.+.   ..++..+.+|+++.++++++++     ++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~-----~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d   72 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDA-----AALAALQ---ALGAEALALDVADPASVAGLAWKLDGEALD   72 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCH-----HHHHHHH---hccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence            47899999999999999999999999999999983     3332222   2346789999999999888642     489


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      ++||++|..
T Consensus        73 ~vi~~ag~~   81 (222)
T PRK06953         73 AAVYVAGVY   81 (222)
T ss_pred             EEEECCCcc
Confidence            999999875

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.52  E-value=3.5e-13  Score=111.91  Aligned_cols=133  Identities=32%  Similarity=0.439  Sum_probs=102.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|+||||||++|++++++|+++|++|++..|+     +++.....    .+++++.+|+.++.++...++++|.++++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~-----~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~   71 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRN-----PEAAAALA----GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS   71 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeC-----HHHHHhhc----CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence            589999999999999999999999999999999     44443222    678999999999999999999999999888


Q ss_pred             CCcc------chhHHHHHHHHHHhC-Ccceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           85 GHTL------LGDQVKIIAAIKEAG-NIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        85 ~~~~------~~~~~~l~~~~~~~~-~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                      +...      ......+++.+.+.+ .+++++. |.++.....      ...|..+|...|..+.+.+++|+..|.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~------~~~~~~~~~~~e~~l~~sg~~~t~lr~  141 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS------PSALARAKAAVEAALRSSGIPYTTLRR  141 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC------ccHHHHHHHHHHHHHHhcCCCeEEEec
Confidence            7442      122234444444432 1566664 666643322      567899999999999999999998883

>PLN00015 protochlorophyllide reductase

Probab=99.50  E-value=1.9e-13  Score=115.73  Aligned_cols=75  Identities=15%  Similarity=0.197  Sum_probs=58.9

Q ss_pred             EEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            8 LFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         8 lVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      +||||+++||.++++.|+++| ++|++++|+.     ++.+ ....+.  ..++.++.+|++|.++++++++       +
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~   75 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDF-----LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP   75 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCH-----HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            699999999999999999999 9999999883     2222 222221  2357778999999999877664       5


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|||||..
T Consensus        76 iD~lInnAG~~   86 (308)
T PLN00015         76 LDVLVCNAAVY   86 (308)
T ss_pred             CCEEEECCCcC
Confidence            89999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=1.6e-13  Score=112.62  Aligned_cols=81  Identities=16%  Similarity=0.207  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++++++|||++|+||+++++.|+++|++|++++|+.     .+.+ ..+.+.  ..++..+++|++++++++++++   
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQ-----EKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIA   77 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999883     2222 112111  3457789999999988876654   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|+|||++|..
T Consensus        78 ~~~~~id~vi~~ag~~   93 (253)
T PRK08217         78 EDFGQLNGLINNAGIL   93 (253)
T ss_pred             HHcCCCCEEEECCCcc
Confidence                479999999854

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=1.9e-13  Score=114.66  Aligned_cols=111  Identities=18%  Similarity=0.139  Sum_probs=81.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      .+++++||||+++||.++++.|+.+|++|++..|+.......+.+........++.++++|+++..++.++.+       
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            4679999999999999999999999999999999953221111222222223457789999999999887654       


Q ss_pred             CcCEEEEcCCCccc---------------------hhHHHHHHHHHHhCCcceee-ecccc
Q 044721           76 QVDVVISTVGHTLL---------------------GDQVKIIAAIKEAGNIKRFF-PSEFG  114 (263)
Q Consensus        76 ~~d~vv~~a~~~~~---------------------~~~~~l~~~~~~~~~~~~~i-~S~~g  114 (263)
                      ..|++|||||....                     ..+..|++.++... ..|+| +||..
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~  173 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSIL  173 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCcc
Confidence            68999999998751                     12456777777776 57777 45543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=3.1e-13  Score=110.03  Aligned_cols=80  Identities=24%  Similarity=0.329  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+ .... ..++..+++|++++++++++++     
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE-----NKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999983     333222 2221 1357889999999998877654     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|.+||+++..
T Consensus        79 ~~~id~ii~~ag~~   92 (238)
T PRK05786         79 LNAIDGLVVTVGGY   92 (238)
T ss_pred             hCCCCEEEEcCCCc
Confidence              479999999854

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.48  E-value=5.5e-14  Score=107.58  Aligned_cols=80  Identities=18%  Similarity=0.275  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      .+.+||||||+.+||.++++++.+.|-+|++++|+     .++++...+. -+......+|+.|.+++++++.       
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~-----e~~L~e~~~~-~p~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRN-----EERLAEAKAE-NPEIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCc-----HHHHHHHHhc-CcchheeeecccchhhHHHHHHHHHhhCC
Confidence            46799999999999999999999999999999999     5555433332 3567888999999998877664       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ..+++|||||.-.
T Consensus        78 ~lNvliNNAGIqr   90 (245)
T COG3967          78 NLNVLINNAGIQR   90 (245)
T ss_pred             chheeeecccccc
Confidence            6899999999864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.48  E-value=2.2e-12  Score=97.14  Aligned_cols=136  Identities=24%  Similarity=0.340  Sum_probs=98.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |||.|.||||.+|++|+++..++||+|+++.|++     +|...     -+++.+++.|+.|++++.+.+.+.|+||...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~-----~K~~~-----~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~   70 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNA-----SKLAA-----RQGVTILQKDIFDLTSLASDLAGHDAVISAF   70 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeCh-----Hhccc-----cccceeecccccChhhhHhhhcCCceEEEec
Confidence            6899999999999999999999999999999994     44321     1467889999999999999999999999998


Q ss_pred             CCcc-------chhHHHHHHHHHHhCCcceee-ec---cccCCCCc---cccCCCCchHHH-HHHHHH--HHH-HHcCCC
Q 044721           85 GHTL-------LGDQVKIIAAIKEAGNIKRFF-PS---EFGNDVDR---VHAVEPAKSAFA-TKAKIR--RAV-EAEGIP  146 (263)
Q Consensus        85 ~~~~-------~~~~~~l~~~~~~~~~~~~~i-~S---~~g~~~~~---~~~~~~~~~~~~-~k~~~e--~~~-~~~~~~  146 (263)
                      +...       ......+++.++.++ ++|++ ++   |.-.....   +.|.- ...|.. ++...|  ..+ .+.+++
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~f-P~ey~~~A~~~ae~L~~Lr~~~~l~  148 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDF-PAEYKPEALAQAEFLDSLRAEKSLD  148 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCC-chhHHHHHHHHHHHHHHHhhccCcc
Confidence            7762       233466888888888 88876 32   33222211   12222 234443 555555  334 345799


Q ss_pred             EEEEec
Q 044721          147 YTYGDV  152 (263)
Q Consensus       147 ~~~gr~  152 (263)
                      ||+...
T Consensus       149 WTfvSP  154 (211)
T COG2910         149 WTFVSP  154 (211)
T ss_pred             eEEeCc
Confidence            997764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.48  E-value=2.4e-13  Score=110.59  Aligned_cols=128  Identities=18%  Similarity=0.208  Sum_probs=84.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-------Cc
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-------QV   77 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~   77 (263)
                      ++|||++|+||+++++.|+++|++|++++|+....   .......+.  +.++..+.+|++|+++++++++       .+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG---AEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhH---HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999874211   111111111  2347789999999998888775       47


Q ss_pred             CEEEEcCCCccc-------------------hhHHHHHHHHHH----hCCcceeee-ccccCCCCccccCCCCchHHHHH
Q 044721           78 DVVISTVGHTLL-------------------GDQVKIIAAIKE----AGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        78 d~vv~~a~~~~~-------------------~~~~~l~~~~~~----~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k  133 (263)
                      |+|||++|....                   .....+++.+..    .+ .+++++ |+.+....    ......|..+|
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g----~~~~~~y~~~k  152 (239)
T TIGR01830        78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMG----NAGQANYAASK  152 (239)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCC----CCCCchhHHHH
Confidence            999999997531                   112344454443    34 556664 55322111    11245688899


Q ss_pred             HHHHHHHHH
Q 044721          134 AKIRRAVEA  142 (263)
Q Consensus       134 ~~~e~~~~~  142 (263)
                      .+.+.+++.
T Consensus       153 ~a~~~~~~~  161 (239)
T TIGR01830       153 AGVIGFTKS  161 (239)
T ss_pred             HHHHHHHHH
Confidence            888776543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.48  E-value=1.8e-12  Score=112.69  Aligned_cols=80  Identities=19%  Similarity=0.281  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|++     ++.+ ..... ..++..+.+|++|++++.+.+.++|++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~-----~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~~~l~~IDiL  249 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS-----DKITLEINGE-DLPVKTLHWQVGQEAALAELLEKVDIL  249 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhhc-CCCeEEEEeeCCCHHHHHHHhCCCCEE
Confidence            3578999999999999999999999999999999883     2221 11111 224667889999999999999999999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      |||||..
T Consensus       250 InnAGi~  256 (406)
T PRK07424        250 IINHGIN  256 (406)
T ss_pred             EECCCcC
Confidence            9999865

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=3.3e-13  Score=103.88  Aligned_cols=165  Identities=18%  Similarity=0.153  Sum_probs=112.8

Q ss_pred             CCCeEEEEcC-CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGG-TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ..++|||||. +|+||.++++++.++|+.|+++.|+-     +....+..  +.++.....|+++++++.....      
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~-----e~M~~L~~--~~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRL-----EPMAQLAI--QFGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcccc-----chHhhHHH--hhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            4678898876 79999999999999999999999983     33222211  3467889999999998866543      


Q ss_pred             --CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        .+|.++||||..-...    +..-++.+.+-+        .             ....-.+|+..+.++++.      
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vN--------v-------------fG~irM~~a~~h~likaK------  131 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVN--------V-------------FGHIRMCRALSHFLIKAK------  131 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccc--------e-------------eeeehHHHHHHHHHHHcc------
Confidence              5899999999763222    222222222111        1             112234666666666664      


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCC
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPA  214 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg  214 (263)
                      |.++|..|+.             +-.++.-...|.+++++....++.|--|+.+.+++|..+-||
T Consensus       132 GtIVnvgSl~-------------~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itG  183 (289)
T KOG1209|consen  132 GTIVNVGSLA-------------GVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITG  183 (289)
T ss_pred             ceEEEeccee-------------EEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEeccc
Confidence            5555555544             444555566788888888888899999999999998776667

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.43  E-value=1.1e-12  Score=105.30  Aligned_cols=151  Identities=21%  Similarity=0.320  Sum_probs=114.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhc--CcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIK--QVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d   78 (263)
                      .++++||||.||||++.+..+...-  +..+.++.-.-.  .. ++.++.. ..++..++++|+.+...+...|.  .+|
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~--s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id   82 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYC--SN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEID   82 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccc--cc-cchhhhhccCCCceEeeccccchHHHHhhhccCchh
Confidence            4789999999999999999999873  555554432110  01 2212222 25788999999999988887775  799


Q ss_pred             EEEEcCCCccc---------------hhHHHHHHHHHHhCCcceeee-c---cccCCC-----CccccCCCCchHHHHHH
Q 044721           79 VVISTVGHTLL---------------GDQVKIIAAIKEAGNIKRFFP-S---EFGNDV-----DRVHAVEPAKSAFATKA  134 (263)
Q Consensus        79 ~vv~~a~~~~~---------------~~~~~l~~~~~~~~~~~~~i~-S---~~g~~~-----~~~~~~~~~~~~~~~k~  134 (263)
                      .|+|.|+..++               -.+..|++++...++++++++ |   +||...     .+....+|.++|.++|+
T Consensus        83 ~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKa  162 (331)
T KOG0747|consen   83 TVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKA  162 (331)
T ss_pred             hhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHH
Confidence            99999998863               235789999999966999984 4   577653     25677899999999999


Q ss_pred             HHHHHHH----HcCCCEEEEeccCchh
Q 044721          135 KIRRAVE----AEGIPYTYGDVLNHGS  157 (263)
Q Consensus       135 ~~e~~~~----~~~~~~~~gr~~n~~~  157 (263)
                      ++|..++    +.++|+++.|..|+++
T Consensus       163 AaE~~v~Sy~~sy~lpvv~~R~nnVYG  189 (331)
T KOG0747|consen  163 AAEMLVRSYGRSYGLPVVTTRMNNVYG  189 (331)
T ss_pred             HHHHHHHHHhhccCCcEEEEeccCccC
Confidence            9999985    5689999999988654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.41  E-value=5.7e-12  Score=96.86  Aligned_cols=131  Identities=18%  Similarity=0.252  Sum_probs=89.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |+++||||+++||++++++|+++| +.|++++|+...  +...+..+.+.  ..++.++++|++++++++++++      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~--~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDS--EGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHH--HHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccc--ccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999999996 477778887110  11122223332  3567889999999998888775      


Q ss_pred             -CcCEEEEcCCCcc-------------------chhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHHH
Q 044721           76 -QVDVVISTVGHTL-------------------LGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        76 -~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~  134 (263)
                       .+|++|||+|...                   +.....+.+.+...+ -.+++ +|+......    ......|..+|.
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~----~~~~~~Y~aska  153 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRG----SPGMSAYSASKA  153 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSS----STTBHHHHHHHH
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccC----CCCChhHHHHHH
Confidence             6899999999875                   111234445444444 45665 455443221    122567888999


Q ss_pred             HHHHHHHH
Q 044721          135 KIRRAVEA  142 (263)
Q Consensus       135 ~~e~~~~~  142 (263)
                      +++.+.+.
T Consensus       154 al~~~~~~  161 (167)
T PF00106_consen  154 ALRGLTQS  161 (167)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.41  E-value=3.8e-12  Score=102.21  Aligned_cols=141  Identities=22%  Similarity=0.325  Sum_probs=111.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +-++-|+|||||+|+.++..|++.|..|++-.|..... .-.++..-++  ..+-+...|+.|++++.++++..++|||+
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~-~r~lkvmGdL--GQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD-PRHLKVMGDL--GQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc-hhheeecccc--cceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            34677999999999999999999999999999974321 1112222222  34778899999999999999999999999


Q ss_pred             CCCcc-----------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           84 VGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        84 a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      .|-..           ....++++..|++.| +.++|. |..+.+...      .+-|..+|++.|..+++.=-+.|+.|
T Consensus       138 IGrd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~s------~Sr~LrsK~~gE~aVrdafPeAtIir  210 (391)
T KOG2865|consen  138 IGRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVKS------PSRMLRSKAAGEEAVRDAFPEATIIR  210 (391)
T ss_pred             eccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccccC------hHHHHHhhhhhHHHHHhhCCcceeec
Confidence            99754           455689999999999 999995 888865332      56688899999999998777777776


Q ss_pred             ccC
Q 044721          152 VLN  154 (263)
Q Consensus       152 ~~n  154 (263)
                      ...
T Consensus       211 Pa~  213 (391)
T KOG2865|consen  211 PAD  213 (391)
T ss_pred             hhh
Confidence            443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.40  E-value=3.1e-13  Score=110.24  Aligned_cols=174  Identities=18%  Similarity=0.190  Sum_probs=119.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hh---ccCCcEEEEccCCCHHH----HHHHhcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HF---KKLGVNLVIGDVLNHES----LVKAIKQ   76 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~~~~D~~~~~~----~~~~~~~   76 (263)
                      +=++|||||.+||++.+++|+++|.+|++++|+     .+|++... ++   -+-.+..+..|+++.+.    +++.+.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt-----~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~  124 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRT-----QEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG  124 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence            348999999999999999999999999999999     55555322 21   12346778899997664    5555555


Q ss_pred             --cCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           77 --VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        77 --~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                        +.++|||+|...-. ...+.+.-.. . .+.++.            +|-......++..+.+|++...     |-++|
T Consensus       125 ~~VgILVNNvG~~~~~-P~~f~~~~~~-~-~~~ii~------------vN~~~~~~~t~~ilp~M~~r~~-----G~Ivn  184 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDY-PESFLKYPEG-E-LQNIIN------------VNILSVTLLTQLILPGMVERKK-----GIIVN  184 (312)
T ss_pred             CceEEEEecccccCCC-cHHHHhCchh-h-hhheeE------------EecchHHHHHHHhhhhhhcCCC-----ceEEE
Confidence              55899999987511 1112221111 1 222221            1212334456666677776443     66777


Q ss_pred             chhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCc
Q 044721          155 HGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKS  216 (263)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~  216 (263)
                      +++..             +..+...-..|.+++.-...+.+++..|+.+++|-|.++.|...
T Consensus       185 igS~a-------------g~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~V  233 (312)
T KOG1014|consen  185 IGSFA-------------GLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLV  233 (312)
T ss_pred             ecccc-------------ccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhhe
Confidence            77766             66667777778888887777899999999999999999998843

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.40  E-value=9e-12  Score=112.95  Aligned_cols=108  Identities=19%  Similarity=0.380  Sum_probs=77.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEEcCCCCCC-cchh--hhhh-----hh-----------ccCCcEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSA-PSKS--QLLD-----HF-----------KKLGVNLV   60 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~--~~~~-----~~-----------~~~~~~~~   60 (263)
                      .+|+|+|||||||+|+++++.|++.+.   +|+++.|...... .++.  +..+     .+           ...++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            578999999999999999999998764   5799999754321 1111  0000     00           02458889


Q ss_pred             EccCCCH------HHHHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee
Q 044721           61 IGDVLNH------ESLVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        61 ~~D~~~~------~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .+|++++      +..+.+.+++|+|||+|+...            +.++.++++.+.+.+..+++++
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~  265 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQ  265 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence            9999986      456667788999999999764            3456889999988643677764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.39  E-value=6.4e-12  Score=117.14  Aligned_cols=114  Identities=19%  Similarity=0.208  Sum_probs=86.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      +.|+||||||+||||+++++.|.++|++|..   .                       .+|++|.+.+.+.++  ++|+|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---~-----------------------~~~l~d~~~v~~~i~~~~pd~V  432 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY---G-----------------------KGRLEDRSSLLADIRNVKPTHV  432 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe---e-----------------------ccccccHHHHHHHHHhhCCCEE
Confidence            3578999999999999999999999988731   1                       135677788877776  78999


Q ss_pred             EEcCCCcc------------------chhHHHHHHHHHHhCCcceeeecc---ccC----------CCCccccCCC-Cch
Q 044721           81 ISTVGHTL------------------LGDQVKIIAAIKEAGNIKRFFPSE---FGN----------DVDRVHAVEP-AKS  128 (263)
Q Consensus        81 v~~a~~~~------------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~----------~~~~~~~~~~-~~~  128 (263)
                      ||+|+...                  +..+.++++++.+.+ ++++++|+   |+.          ...++++.++ .+.
T Consensus       433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~  511 (668)
T PLN02260        433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSF  511 (668)
T ss_pred             EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCCh
Confidence            99998652                  234689999999999 88877643   321          1233334444 488


Q ss_pred             HHHHHHHHHHHHHHc
Q 044721          129 AFATKAKIRRAVEAE  143 (263)
Q Consensus       129 ~~~~k~~~e~~~~~~  143 (263)
                      |+.+|.+.|.+++..
T Consensus       512 Yg~sK~~~E~~~~~~  526 (668)
T PLN02260        512 YSKTKAMVEELLREY  526 (668)
T ss_pred             hhHHHHHHHHHHHhh
Confidence            999999999999765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.37  E-value=1.4e-11  Score=103.16  Aligned_cols=136  Identities=21%  Similarity=0.241  Sum_probs=87.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGH   86 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~~   86 (263)
                      ||||||+|+||+++++.|+++|++|++++|+.....  ..   .   .  ..  ..|+.. ..+.+.+.++|+|||+|+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---~---~--~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA--NT---K---W--EG--YKPWAP-LAESEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC--cc---c---c--ee--eecccc-cchhhhcCCCCEEEECCCC
Confidence            689999999999999999999999999999854321  00   0   0  01  112222 3445677899999999986


Q ss_pred             cc-----------------chhHHHHHHHHHHhCCcc--eeee-cc---ccCCC----CccccCCCCchHHHHHHHHHHH
Q 044721           87 TL-----------------LGDQVKIIAAIKEAGNIK--RFFP-SE---FGNDV----DRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        87 ~~-----------------~~~~~~l~~~~~~~~~~~--~~i~-S~---~g~~~----~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      ..                 +..++++++++.+.+ ++  +++. |+   |+...    +++.+..+...+...+...|..
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~  146 (292)
T TIGR01777        68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEA  146 (292)
T ss_pred             CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHH
Confidence            32                 234689999999998 74  3443 33   44321    2222222333344455555555


Q ss_pred             H---HHcCCCEEEEeccCch
Q 044721          140 V---EAEGIPYTYGDVLNHG  156 (263)
Q Consensus       140 ~---~~~~~~~~~gr~~n~~  156 (263)
                      +   ++.++++++.|..++.
T Consensus       147 ~~~~~~~~~~~~ilR~~~v~  166 (292)
T TIGR01777       147 AQAAEDLGTRVVLLRTGIVL  166 (292)
T ss_pred             hhhchhcCCceEEEeeeeEE
Confidence            4   3458999999977653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.36  E-value=1.4e-11  Score=98.92  Aligned_cols=133  Identities=23%  Similarity=0.341  Sum_probs=81.2

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVVISTVG   85 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vv~~a~   85 (263)
                      |+||||||+||++|+.+|.+.||+|++++|++....            .+.....   ...+.+.+... ++|+|||+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~------------~~~~~~v---~~~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS------------QNLHPNV---TLWEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh------------hhcCccc---cccchhhhcccCCCCEEEECCC
Confidence            689999999999999999999999999999964321            0111111   12233334444 7999999999


Q ss_pred             Ccc-----------------chhHHHHHHHHHHhCC-cceeee-c---cccCCCCccc-cCCCCchHHHHHHH--HHHHH
Q 044721           86 HTL-----------------LGDQVKIIAAIKEAGN-IKRFFP-S---EFGNDVDRVH-AVEPAKSAFATKAK--IRRAV  140 (263)
Q Consensus        86 ~~~-----------------~~~~~~l~~~~~~~~~-~~~~i~-S---~~g~~~~~~~-~~~~~~~~~~~k~~--~e~~~  140 (263)
                      ..-                 +..++.+.+...+..+ .+.+|. |   .||...+... +..+...-+.++.+  -|+..
T Consensus        66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a  145 (297)
T COG1090          66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEA  145 (297)
T ss_pred             CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHH
Confidence            874                 3456788887775442 445553 2   4666543311 11222223333332  22222


Q ss_pred             ---HHcCCCEEEEeccC
Q 044721          141 ---EAEGIPYTYGDVLN  154 (263)
Q Consensus       141 ---~~~~~~~~~gr~~n  154 (263)
                         +..|...++.|+..
T Consensus       146 ~~a~~~gtRvvllRtGv  162 (297)
T COG1090         146 LQAQQLGTRVVLLRTGV  162 (297)
T ss_pred             hhhhhcCceEEEEEEEE
Confidence               34577888888554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.36  E-value=1.5e-11  Score=94.95  Aligned_cols=132  Identities=17%  Similarity=0.193  Sum_probs=87.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++++||||+|+||.++++.|+++|+ .|+++.|+..... .....+..+  .+.++..+.+|++++++++++++      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAP-GAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCc-cHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999996 5777888753321 111101111  13456788999999988887765      


Q ss_pred             -CcCEEEEcCCCcc-------------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHH
Q 044721           76 -QVDVVISTVGHTL-------------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        76 -~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~  134 (263)
                       .+|.+||++|...                   +.....+++.+.+.+ .++++. |+.......    .....|..+|.
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~----~~~~~y~~sk~  154 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGN----PGQANYAAANA  154 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCC----CCchhhHHHHH
Confidence             4799999998543                   123456666666666 677664 543321111    12456888998


Q ss_pred             HHHHHHHH
Q 044721          135 KIRRAVEA  142 (263)
Q Consensus       135 ~~e~~~~~  142 (263)
                      .++.+++.
T Consensus       155 ~~~~~~~~  162 (180)
T smart00822      155 FLDALAAH  162 (180)
T ss_pred             HHHHHHHH
Confidence            88887643

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.35  E-value=4.1e-12  Score=103.79  Aligned_cols=126  Identities=16%  Similarity=0.155  Sum_probs=87.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ..|.|+|||.-.+.|..+++.|.++|+.|.+....++     ..+.+... ..++...++.|++++++++++.+      
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~-----gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEE-----GAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCc-----hHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            3577999999999999999999999999999886633     22322222 26788889999999999998875      


Q ss_pred             ---CcCEEEEcCCCcc------------------------chhHHHHHHHHHHhCCcceee-ecc-ccCCCCccccCCCC
Q 044721           76 ---QVDVVISTVGHTL------------------------LGDQVKIIAAIKEAGNIKRFF-PSE-FGNDVDRVHAVEPA  126 (263)
Q Consensus        76 ---~~d~vv~~a~~~~------------------------~~~~~~l~~~~~~~~~~~~~i-~S~-~g~~~~~~~~~~~~  126 (263)
                         +.-.+|||||+..                        +.-++.++.-.+++.  .|+| +|| .|...     ....
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~-----~p~~  175 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVA-----LPAL  175 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCcc-----Cccc
Confidence               5678999999653                        122455555555554  4444 333 33211     1125


Q ss_pred             chHHHHHHHHHHHH
Q 044721          127 KSAFATKAKIRRAV  140 (263)
Q Consensus       127 ~~~~~~k~~~e~~~  140 (263)
                      .+|..||.++|.+.
T Consensus       176 g~Y~~SK~aVeaf~  189 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFS  189 (322)
T ss_pred             ccchhhHHHHHHHH
Confidence            56777777777644

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.34  E-value=1.1e-11  Score=96.64  Aligned_cols=82  Identities=16%  Similarity=0.164  Sum_probs=63.6

Q ss_pred             CCCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccC--CcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKL--GVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|++||+|-  ...|+-.|++.|.++|+++..++.+.     ...+.++.+.++  ...++++|+++.+++.++|.  
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-----~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-----RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence            57899999997  56899999999999999999988773     222222332211  24578999999999888875  


Q ss_pred             -----CcCEEEEcCCCcc
Q 044721           76 -----QVDVVISTVGHTL   88 (263)
Q Consensus        76 -----~~d~vv~~a~~~~   88 (263)
                           ++|.+||+.+...
T Consensus        79 ~~~~g~lD~lVHsIaFa~   96 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAP   96 (259)
T ss_pred             HHhhCcccEEEEEeccCC
Confidence                 6899999999875

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.32  E-value=3.6e-11  Score=102.88  Aligned_cols=148  Identities=26%  Similarity=0.370  Sum_probs=102.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhccCCcEEEEccCCCHHH-HHHHhc---
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKKLGVNLVIGDVLNHES-LVKAIK---   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~-~~~~~~---   75 (263)
                      |+++++|+|+||||++|+.+++.|+++|+.|+++.|+....    ...+. .........+..|...+.+ +..+..   
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a----~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~  151 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKA----EDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP  151 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhh----hhhhcccccccccceeeeccccccchhhhhhhhcc
Confidence            35667999999999999999999999999999999995332    11111 1123345556666555433 333333   


Q ss_pred             -CcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCC---CchHHHHHHHHHH
Q 044721           76 -QVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEP---AKSAFATKAKIRR  138 (263)
Q Consensus        76 -~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~---~~~~~~~k~~~e~  138 (263)
                       ...+++-+++...            ..++.+++++|+.+| ++++++ |+++.+.... +.+.   ...+...|..+++
T Consensus       152 ~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~-~~~~~~~~~~~~~~k~~~e~  229 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQ-PPNILLLNGLVLKAKLKAEK  229 (411)
T ss_pred             ccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCC-CchhhhhhhhhhHHHHhHHH
Confidence             3446666665432            346799999999999 999984 8887654321 1221   2245579999999


Q ss_pred             HHHHcCCCEEEEeccC
Q 044721          139 AVEAEGIPYTYGDVLN  154 (263)
Q Consensus       139 ~~~~~~~~~~~gr~~n  154 (263)
                      ++++.|++|++.|...
T Consensus       230 ~~~~Sgl~ytiIR~g~  245 (411)
T KOG1203|consen  230 FLQDSGLPYTIIRPGG  245 (411)
T ss_pred             HHHhcCCCcEEEeccc
Confidence            9999999999988443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.32  E-value=4.1e-11  Score=120.24  Aligned_cols=149  Identities=16%  Similarity=0.171  Sum_probs=105.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC----CCEEEEEcCCCCCCcchhhhhh-hh---------ccCCcEEEEccCCC---
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLD-HF---------KKLGVNLVIGDVLN---   66 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~-~~---------~~~~~~~~~~D~~~---   66 (263)
                      .++|+|||||||+|+++++.|++++    ++|+++.|+....  ...+.+. ..         ...++.++.+|+++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE--AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH--HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence            4789999999999999999999887    7899999974321  1111111 00         01368889999974   


Q ss_pred             ---HHHHHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCC--------------
Q 044721           67 ---HESLVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGND--------------  116 (263)
Q Consensus        67 ---~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~--------------  116 (263)
                         .+...++..++|+|||+|+...            +.++.++++.+.+.+ ++++++ |+.+..              
T Consensus      1049 gl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~ 1127 (1389)
T TIGR03443      1049 GLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQ 1127 (1389)
T ss_pred             CcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhh
Confidence               4566777789999999998754            345788999998888 888774 542211              


Q ss_pred             -----CCcc-----ccCCCCchHHHHHHHHHHHHHH---cCCCEEEEeccCc
Q 044721          117 -----VDRV-----HAVEPAKSAFATKAKIRRAVEA---EGIPYTYGDVLNH  155 (263)
Q Consensus       117 -----~~~~-----~~~~~~~~~~~~k~~~e~~~~~---~~~~~~~gr~~n~  155 (263)
                           ..+.     ....+.++|..+|..+|.++..   .|+++++.|..++
T Consensus      1128 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v 1179 (1389)
T TIGR03443      1128 AGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYV 1179 (1389)
T ss_pred             ccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCcc
Confidence                 0011     0112346799999999999853   5899998887664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.29  E-value=2.7e-11  Score=103.05  Aligned_cols=83  Identities=25%  Similarity=0.266  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHHCCCCEEEEEcCCCCCCc----------chhh-hhhhhccCCcEEEEccCCCHHHH
Q 044721            4 KSKILFIGGTGYIGKF--IVEASVKAGHPTFVLVRESTLSAP----------SKSQ-LLDHFKKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~-~~~~~~~~~~~~~~~D~~~~~~~   70 (263)
                      +|++||||+++++|.+  +++.| +.|++|+++++.......          +..+ .++.. +..+..+.+|+++++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHHH
Confidence            5899999999999999  89999 999998888854211100          0111 11211 23456789999999888


Q ss_pred             HHHhc-------CcCEEEEcCCCcc
Q 044721           71 VKAIK-------QVDVVISTVGHTL   88 (263)
Q Consensus        71 ~~~~~-------~~d~vv~~a~~~~   88 (263)
                      +++++       ++|+||||++...
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCC
Confidence            77765       6899999999873

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.26  E-value=1e-11  Score=101.44  Aligned_cols=55  Identities=13%  Similarity=0.115  Sum_probs=43.9

Q ss_pred             HHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcCEEEEcCCCc
Q 044721           20 IVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVDVVISTVGHT   87 (263)
Q Consensus        20 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vv~~a~~~   87 (263)
                      +++.|+++|++|++++|+..     +.+        ...++++|++|.++++++++    ++|+||||||..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~-----~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~   59 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREP-----GMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP   59 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcc-----hhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC
Confidence            47889999999999999843     211        12457899999999998886    589999999974

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.23  E-value=1.5e-10  Score=90.42  Aligned_cols=137  Identities=19%  Similarity=0.246  Sum_probs=86.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-------
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      +++||||+|+||..+++.|+++|. +++++.|++... .+..+.++.+.  +.++.++.+|++|++++.++++       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~-~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS-AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS-TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc-HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            689999999999999999999985 799999983211 22223334443  4567889999999999999885       


Q ss_pred             CcCEEEEcCCCcc-------------------chhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHHHH
Q 044721           76 QVDVVISTVGHTL-------------------LGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        76 ~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~~  135 (263)
                      .++.|||+||...                   +.+..++.+...... .++++ +||...-...    .....|..+...
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~----~gq~~YaaAN~~  155 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGG----PGQSAYAAANAF  155 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-----TTBHHHHHHHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccC----cchHhHHHHHHH
Confidence            4789999999864                   223456777776667 88877 4653221111    014568778888


Q ss_pred             HHHHHH---HcCCCEE
Q 044721          136 IRRAVE---AEGIPYT  148 (263)
Q Consensus       136 ~e~~~~---~~~~~~~  148 (263)
                      ++.+.+   +.+.++.
T Consensus       156 lda~a~~~~~~g~~~~  171 (181)
T PF08659_consen  156 LDALARQRRSRGLPAV  171 (181)
T ss_dssp             HHHHHHHHHHTTSEEE
T ss_pred             HHHHHHHHHhCCCCEE
Confidence            887763   4455543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.22  E-value=2.9e-10  Score=89.70  Aligned_cols=155  Identities=21%  Similarity=0.282  Sum_probs=112.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh----hccCCcEEEEccCCCHHHHHHHhc--Cc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH----FKKLGVNLVIGDVLNHESLVKAIK--QV   77 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~--~~   77 (263)
                      .|..||||=||+-|+.+++.|+.+||+|+.+.|+++.....+.+.+..    ..+.....+.+|++|...+.+++.  .+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            357899999999999999999999999999999887765555554321    123456789999999999999887  56


Q ss_pred             CEEEEcCCCccc---------------hhHHHHHHHHHHhCCcc---eee-ecc---ccC----CCCccccCCCCchHHH
Q 044721           78 DVVISTVGHTLL---------------GDQVKIIAAIKEAGNIK---RFF-PSE---FGN----DVDRVHAVEPAKSAFA  131 (263)
Q Consensus        78 d~vv~~a~~~~~---------------~~~~~l~~~~~~~~~~~---~~i-~S~---~g~----~~~~~~~~~~~~~~~~  131 (263)
                      +-|+|+|+..++               .++.+|+++...++ ..   +++ .|+   ||.    ...+..|.-|.++|..
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~-l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~  186 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR-LTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA  186 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC-cccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence            889999988762               34688999988886 33   222 232   553    2355677788999999


Q ss_pred             HHHHHHHHH----HHcCCCEEEEeccCchhHH
Q 044721          132 TKAKIRRAV----EAEGIPYTYGDVLNHGSLV  159 (263)
Q Consensus       132 ~k~~~e~~~----~~~~~~~~~gr~~n~~~~~  159 (263)
                      +|...-..+    +..++=.+.|-.+|+.++.
T Consensus       187 aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  187 AKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             hhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence            998654322    3445555566677765544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.22  E-value=4e-11  Score=123.10  Aligned_cols=86  Identities=21%  Similarity=0.151  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCC---------------------------------------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSA---------------------------------------   42 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~---------------------------------------   42 (263)
                      +++++|||||+++||..++++|+++ |++|++++|+.....                                       
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4679999999999999999999998 699999999831000                                       


Q ss_pred             ----cchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc------CcCEEEEcCCCcc
Q 044721           43 ----PSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK------QVDVVISTVGHTL   88 (263)
Q Consensus        43 ----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~d~vv~~a~~~~   88 (263)
                          .+..+.++.+.  +.++.++.+|++|.++++++++      ++|+||||||...
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence                00000111111  3457889999999999888775      5899999999753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06720 hypothetical protein; Provisional

Probab=99.18  E-value=1.8e-10  Score=88.71  Aligned_cols=82  Identities=15%  Similarity=0.142  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHh------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAI------   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~------   74 (263)
                      ++++++||||+++||+++++.|++.|++|++++|+....    .+..+.+.  +.....+.+|+++.+++++++      
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESG----QATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999874211    11112221  334667899999998887755      


Q ss_pred             -cCcCEEEEcCCCcc
Q 044721           75 -KQVDVVISTVGHTL   88 (263)
Q Consensus        75 -~~~d~vv~~a~~~~   88 (263)
                       .++|++|||||...
T Consensus        91 ~G~iDilVnnAG~~~  105 (169)
T PRK06720         91 FSRIDMLFQNAGLYK  105 (169)
T ss_pred             cCCCCEEEECCCcCC
Confidence             36999999999653

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.12  E-value=8.4e-10  Score=82.81  Aligned_cols=134  Identities=20%  Similarity=0.207  Sum_probs=104.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |.+|..+|.||||-.|+.+++++++.+  .+|+++.|+.... ++        ....+.....|....++....+.+.|+
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d-~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~dV   86 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD-PA--------TDKVVAQVEVDFSKLSQLATNEQGPDV   86 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC-cc--------ccceeeeEEechHHHHHHHhhhcCCce
Confidence            467899999999999999999999998  4799999884211 10        133466778899989999999999999


Q ss_pred             EEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           80 VISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        80 vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      .|.+.|.+.            .+-...+++++++.| +++|++ ||.|.+.+.      ...|...|..+|+-+.+..++
T Consensus        87 ~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS------rFlY~k~KGEvE~~v~eL~F~  159 (238)
T KOG4039|consen   87 LFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS------RFLYMKMKGEVERDVIELDFK  159 (238)
T ss_pred             EEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc------ceeeeeccchhhhhhhhcccc
Confidence            999988765            123467788999999 999984 888876543      567888999999998887765


Q ss_pred             E-EEEe
Q 044721          147 Y-TYGD  151 (263)
Q Consensus       147 ~-~~gr  151 (263)
                      . .+.|
T Consensus       160 ~~~i~R  165 (238)
T KOG4039|consen  160 HIIILR  165 (238)
T ss_pred             EEEEec
Confidence            4 3444

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.11  E-value=9.2e-10  Score=94.19  Aligned_cols=100  Identities=23%  Similarity=0.302  Sum_probs=83.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ||+|+|.|+ |+||+.+++.|+++| .+|++.+|+     .++...+......+++..+.|..|.+.+.+++++.|++||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs-----~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRS-----KEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence            579999998 999999999999999 899999999     5555544444445899999999999999999999999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceeeeccc
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFFPSEF  113 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~  113 (263)
                      +++...   ..+++++|.+.| +..+-.|.+
T Consensus        75 ~~p~~~---~~~i~ka~i~~g-v~yvDts~~  101 (389)
T COG1748          75 AAPPFV---DLTILKACIKTG-VDYVDTSYY  101 (389)
T ss_pred             eCCchh---hHHHHHHHHHhC-CCEEEcccC
Confidence            998763   457899999998 665544433

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.10  E-value=4.2e-11  Score=97.77  Aligned_cols=168  Identities=16%  Similarity=0.129  Sum_probs=114.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-----cCCcEEEEccCCCHHHHHHHhc----
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .+|+|||++.+||.+++.++..+|++|+++.|+.     .|+..+....     -..+.+..+|+.|-+++...++    
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~-----~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSG-----KKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccH-----HHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            4899999999999999999999999999999994     3333222111     1236688899999888887776    


Q ss_pred             ---CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         .+|.+|+|||.......    ...++-..                     ..|-...++.+|+.+..+-+...    
T Consensus       109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m---------------------~vNylgt~~v~~~~~~~mk~~~~----  163 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLM---------------------DVNYLGTVNVAKAAARAMKKREH----  163 (331)
T ss_pred             ccCCcceEEEecCcccccccccCCHHHHHHHH---------------------HhhhhhhHHHHHHHHHHhhcccc----
Confidence               37999999997642111    11111111                     11224556667776666554332    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                      .|+++.+++..             +..++.+-..|.+++.+..++...+..|...++++|-+..|+.
T Consensus       164 ~g~I~~vsS~~-------------a~~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~  217 (331)
T KOG1210|consen  164 LGRIILVSSQL-------------AMLGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPD  217 (331)
T ss_pred             CcEEEEehhhh-------------hhcCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCC
Confidence            23544444444             5667777777888888877788888888888888888777763

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.04  E-value=2.4e-09  Score=82.92  Aligned_cols=95  Identities=20%  Similarity=0.259  Sum_probs=72.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hc-cCCcEEEEccCCCHHHHHHHhc-------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FK-KLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      |+++||||||++|+ +++.|++.|++|++++|++     ++.+.+.. +. ...+..+.+|+.|++++.++++       
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~-----~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g   74 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARRE-----VKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG   74 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCH-----HHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57999999987765 9999999999999999983     33322111 21 2357788899999999888775       


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcc----eee
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIK----RFF  109 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~----~~i  109 (263)
                      ++|.+|+.+-.   ....++..++.+.+ ++    +++
T Consensus        75 ~id~lv~~vh~---~~~~~~~~~~~~~g-v~~~~~~~~  108 (177)
T PRK08309         75 PFDLAVAWIHS---SAKDALSVVCRELD-GSSETYRLF  108 (177)
T ss_pred             CCeEEEEeccc---cchhhHHHHHHHHc-cCCCCceEE
Confidence            47888876653   46788999999999 88    776

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.92  E-value=3.3e-08  Score=86.23  Aligned_cols=171  Identities=19%  Similarity=0.270  Sum_probs=110.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CCEEEEEcCCCCCCc-chhh------hhhhhc------cCCcEEEEccCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAP-SKSQ------LLDHFK------KLGVNLVIGDVLN   66 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~------~~~~~~------~~~~~~~~~D~~~   66 (263)
                      .+|+|+|||||||+|.-+++.|++.-   -+++++.|.+...+. ++.+      ..+.++      -.++..+.||+++
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            47899999999999999999999864   368888887655321 1111      011111      1457778899985


Q ss_pred             ------HHHHHHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-cc-ccC-----------
Q 044721           67 ------HESLVKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SE-FGN-----------  115 (263)
Q Consensus        67 ------~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~-~g~-----------  115 (263)
                            ++++..+.+.+|+|||+|+...            ..+++++++-|++..+.+.+++ |. |-.           
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y  170 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY  170 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence                  3566667889999999999875            3456888888888764555553 42 111           


Q ss_pred             --CC----C------c----------c--ccCCCCchHHHHHHHHHHHHHH--cCCCEEEEeccCc--------hhHHHH
Q 044721          116 --DV----D------R----------V--HAVEPAKSAFATKAKIRRAVEA--EGIPYTYGDVLNH--------GSLVKA  161 (263)
Q Consensus       116 --~~----~------~----------~--~~~~~~~~~~~~k~~~e~~~~~--~~~~~~~gr~~n~--------~~~~~~  161 (263)
                        ..    +      +          .  ......+.|.-+|+.+|+++.+  .++|.++.|..-+        .++.+.
T Consensus       171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn  250 (467)
T KOG1221|consen  171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDN  250 (467)
T ss_pred             CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcccc
Confidence              00    0      0          0  0011256788899999999954  5899998885543        234444


Q ss_pred             hcccceEEEecC
Q 044721          162 IKQVDVVISTVG  173 (263)
Q Consensus       162 ~~~~~~~~~~~~  173 (263)
                      +.+...++...+
T Consensus       251 ~~gp~g~i~g~g  262 (467)
T KOG1221|consen  251 LNGPDGVIIGYG  262 (467)
T ss_pred             CCCCceEEEEec
Confidence            445544444433

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.86  E-value=2.1e-08  Score=87.67  Aligned_cols=90  Identities=31%  Similarity=0.392  Sum_probs=69.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC-C-CEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            7 ILFIGGTGYIGKFIVEASVKAG-H-PTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |+|.|+ |++|+.+++.|++.+ . +|++.+|+     .++.+.+ +.+...++..++.|+.|.+++.++++++|+|||+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRN-----PEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESS-----HHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECC-----HHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence            789999 999999999999987 4 89999999     5555433 2224568999999999999999999999999999


Q ss_pred             CCCccchhHHHHHHHHHHhCCcc
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      +|+.   ....++++|.+.| +.
T Consensus        75 ~gp~---~~~~v~~~~i~~g-~~   93 (386)
T PF03435_consen   75 AGPF---FGEPVARACIEAG-VH   93 (386)
T ss_dssp             SSGG---GHHHHHHHHHHHT--E
T ss_pred             Cccc---hhHHHHHHHHHhC-CC
Confidence            9987   4567889999988 53

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.74  E-value=9.8e-08  Score=78.08  Aligned_cols=96  Identities=21%  Similarity=0.202  Sum_probs=76.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+|+|+||||. |+.+++.|.+.|++|++..++...     .+.+.   ..+...+..+..|.+++.+.++  ++|+||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~-----~~~~~---~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG-----KHLYP---IHQALTVHTGALDPQELREFLKRHSIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc-----ccccc---ccCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence            58999999999 999999999999999999988532     11111   1223345567778888888886  6999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .+.+.......+..++|.+.+ ++.+=+
T Consensus        72 AtHPfA~~is~~a~~a~~~~~-ipylR~   98 (256)
T TIGR00715        72 ATHPFAAQITTNATAVCKELG-IPYVRF   98 (256)
T ss_pred             cCCHHHHHHHHHHHHHHHHhC-CcEEEE
Confidence            999988888899999999999 876643

This enzyme was found to be a monomer by gel filtration.

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.72  E-value=2.3e-08  Score=78.25  Aligned_cols=185  Identities=16%  Similarity=0.088  Sum_probs=100.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      .+.+|+||+|.+||..++..+.+++-+.....++......+.+.   -..........+|+++..-+.++++       +
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~---v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLK---VAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceE---EEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            56799999999999999999999886655444442221111111   0011223345566766655555543       5


Q ss_pred             cCEEEEcCCCccchhHHHHHH-HHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           77 VDVVISTVGHTLLGDQVKIIA-AIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~~~l~~-~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      .|.+|||||...  ....... ...... +++++.            .|..+.....+.+.+.+ +  +.| ..+.++|.
T Consensus        83 r~iiI~NAG~lg--dvsk~~~~~~D~~q-w~ky~~------------~NlfS~VsL~~~~l~~l-k--~~p-~~~~vVnv  143 (253)
T KOG1204|consen   83 RDIIIHNAGSLG--DVSKGAVDLGDSDQ-WKKYWD------------LNLFSMVSLVQWALPKL-K--KSP-VNGNVVNV  143 (253)
T ss_pred             eeEEEecCCCcc--chhhccCCcccHHH-HHHHHH------------hhhhhHHhhHHHHHHHh-c--CCC-ccCeEEEe
Confidence            799999999764  1111000 000000 111110            01011111112111111 1  111 12334444


Q ss_pred             hhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHH
Q 044721          156 GSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKI  224 (263)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~  224 (263)
                      ++..             .-.++.....|++.|++...+.+.++.|=- +++++-+++||...+.+...+
T Consensus       144 SS~a-------------av~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~i  198 (253)
T KOG1204|consen  144 SSLA-------------AVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCI  198 (253)
T ss_pred             cchh-------------hhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHH
Confidence            4443             445667777888888887777888888765 789999999998777665443

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.70  E-value=9.9e-08  Score=75.30  Aligned_cols=81  Identities=20%  Similarity=0.315  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|+||+|++|+.+++.|++.|++|++++|+     .++.+.+ +.+. ..+......|..+.+++.++++++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRD-----LERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            46899999999999999999999999999999998     4333322 2221 123456677899999999999999999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |++.+...
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99876553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK09620 hypothetical protein; Provisional

Probab=98.68  E-value=8.6e-08  Score=77.26  Aligned_cols=82  Identities=22%  Similarity=0.299  Sum_probs=57.4

Q ss_pred             CCCCeEEEEcCC----------------ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGGT----------------GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      |.+|+|+||+|.                |++|++++++|+++|++|+++++..... +...   .  .......+..|..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~-~~~~---~--~~~~~~~V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEK-PNDI---N--NQLELHPFEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCC-Cccc---C--CceeEEEEecHHH
Confidence            468999999885                9999999999999999999888643211 1100   0  0112334555444


Q ss_pred             CHHHHHHHhc--CcCEEEEcCCCccc
Q 044721           66 NHESLVKAIK--QVDVVISTVGHTLL   89 (263)
Q Consensus        66 ~~~~~~~~~~--~~d~vv~~a~~~~~   89 (263)
                      ..+.+.+++.  ++|+|||+|+....
T Consensus        75 ~~~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         75 LQDKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHHhcccCCCEEEECccccce
Confidence            4467778885  68999999998753

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.64  E-value=3.4e-07  Score=71.72  Aligned_cols=127  Identities=22%  Similarity=0.212  Sum_probs=84.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--C-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH--P-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d   78 (263)
                      +++|+|||++|.+|++|.+.+...|.  + -+..+..                       .+|+++.++.+++|.  ++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~ekPt   57 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESEKPT   57 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhccCCc
Confidence            47999999999999999999999876  2 2222222                       469999999999997  577


Q ss_pred             EEEEcCCCcc----------------chhHHHHHHHHHHhCCcceeee--ccccCC------CCc----cccCCCCc-hH
Q 044721           79 VVISTVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP--SEFGND------VDR----VHAVEPAK-SA  129 (263)
Q Consensus        79 ~vv~~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~--S~~g~~------~~~----~~~~~~~~-~~  129 (263)
                      .|||.|+...                +....|++..+-+.| +++++.  |+.-..      .++    ..|..|.+ .|
T Consensus        58 hVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gY  136 (315)
T KOG1431|consen   58 HVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGY  136 (315)
T ss_pred             eeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHH
Confidence            8888887553                122368899999999 888773  542111      122    22333333 45


Q ss_pred             HHHHHHHHH----HHHHcCCCEEEEeccC
Q 044721          130 FATKAKIRR----AVEAEGIPYTYGDVLN  154 (263)
Q Consensus       130 ~~~k~~~e~----~~~~~~~~~~~gr~~n  154 (263)
                      ..+|+.+.-    +-.+.|..|+-+-..|
T Consensus       137 syAKr~idv~n~aY~~qhg~~~tsviPtN  165 (315)
T KOG1431|consen  137 SYAKRMIDVQNQAYRQQHGRDYTSVIPTN  165 (315)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeeecccc
Confidence            557755442    2346677777554444

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.62  E-value=3.4e-07  Score=77.38  Aligned_cols=101  Identities=16%  Similarity=0.129  Sum_probs=72.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +|+||+|+|++|.||+.++..|+..+  .++++++++...  .+..+. .+.   .......+.+|+.++.+.++++|+|
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g~a~Dl-~~~---~~~~~v~~~td~~~~~~~l~gaDvV   80 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--GVAADL-SHI---DTPAKVTGYADGELWEKALRGADLV   80 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--ccccch-hhc---CcCceEEEecCCCchHHHhCCCCEE
Confidence            57899999999999999999999665  579999984211  111111 111   1123445666766667889999999


Q ss_pred             EEcCCCccc-------------hhHHHHHHHHHHhCCcceeee
Q 044721           81 ISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      |+++|....             ...+++++++.+++ ++++++
T Consensus        81 VitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~ivi  122 (321)
T PTZ00325         81 LICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVG  122 (321)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence            999998641             24578899999999 999874

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.61  E-value=1.9e-07  Score=75.51  Aligned_cols=68  Identities=22%  Similarity=0.343  Sum_probs=48.2

Q ss_pred             CCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC--HHHHHHHhcCcCEEEEcCCCcc
Q 044721           12 GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN--HESLVKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        12 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vv~~a~~~~   88 (263)
                      +||++|++++++|+++|++|++++|+....         .....++.++.++-.+  .+.+.+.++++|++||+||...
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            488999999999999999999998763210         0001245555544332  2456677788999999999865

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.56  E-value=2.7e-07  Score=80.29  Aligned_cols=74  Identities=18%  Similarity=0.268  Sum_probs=57.9

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      +++++++||||                ||++|.+++++|+++|++|++++++...      .    . ..  .+...|++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~------~----~-~~--~~~~~dv~  252 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL------P----T-PA--GVKRIDVE  252 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc------c----C-CC--CcEEEccC
Confidence            45789999999                8889999999999999999999887421      0    0 11  23457999


Q ss_pred             CHHHHHHHh----cCcCEEEEcCCCcc
Q 044721           66 NHESLVKAI----KQVDVVISTVGHTL   88 (263)
Q Consensus        66 ~~~~~~~~~----~~~d~vv~~a~~~~   88 (263)
                      +.+++.+++    .++|++||+||...
T Consensus       253 ~~~~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        253 SAQEMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             CHHHHHHHHHHhcCCCCEEEEcccccc
Confidence            987776655    46999999999864

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.54  E-value=3.3e-07  Score=76.29  Aligned_cols=92  Identities=29%  Similarity=0.435  Sum_probs=71.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----CCCCEEEEEcCCCCCCcchhh-hhhhhc---c---CCcEEEEccCCCHHHHHHHh
Q 044721            6 KILFIGGTGYIGKFIVEASVK----AGHPTFVLVRESTLSAPSKSQ-LLDHFK---K---LGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~---~~~~~~~~D~~~~~~~~~~~   74 (263)
                      -++|.|||||.|..+++++..    .|....+..|+     ++|++ .++...   +   ....++.+|..|++++.++.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn-----~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema   81 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRN-----EKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA   81 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCC-----HHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH
Confidence            589999999999999999999    67889999999     54544 222211   1   12337889999999999999


Q ss_pred             cCcCEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           75 KQVDVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +++.+|+||+|+....+ ..++++|.++|
T Consensus        82 k~~~vivN~vGPyR~hG-E~VVkacienG  109 (423)
T KOG2733|consen   82 KQARVIVNCVGPYRFHG-EPVVKACIENG  109 (423)
T ss_pred             hhhEEEEeccccceecC-cHHHHHHHHcC
Confidence            99999999999986333 35677777776

>PLN00106 malate dehydrogenase

Probab=98.50  E-value=9.2e-07  Score=74.87  Aligned_cols=100  Identities=16%  Similarity=0.152  Sum_probs=71.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+||+|+|++|.+|+.++..|+..+  .++++++++...  .+..+    +.+........++++.+++.+.++++|+||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~D----l~~~~~~~~i~~~~~~~d~~~~l~~aDiVV   91 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAAD----VSHINTPAQVRGFLGDDQLGDALKGADLVI   91 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEch----hhhCCcCceEEEEeCCCCHHHHcCCCCEEE
Confidence            4689999999999999999999776  379999988511  11111    111111223345555556788999999999


Q ss_pred             EcCCCcc-------------chhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTL-------------LGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++||...             ....+++++.+.+.+ .+.+++
T Consensus        92 itAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivi  132 (323)
T PLN00106         92 IPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVN  132 (323)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence            9999864             233578888999998 888764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.50  E-value=7e-07  Score=74.82  Aligned_cols=82  Identities=15%  Similarity=0.161  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ++++++|+|| |++|++++..|++.|++ |+++.|+.+.  .++.+ ..+.+.  ...+.....|+.+.+++++.++.+|
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~--~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDF--YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchH--HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence            4678999998 89999999999999986 9999998421  02222 122221  1234566789988888888888999


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +|||+....
T Consensus       202 ilINaTp~G  210 (289)
T PRK12548        202 ILVNATLVG  210 (289)
T ss_pred             EEEEeCCCC
Confidence            999998654

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.48  E-value=3.2e-07  Score=73.08  Aligned_cols=86  Identities=19%  Similarity=0.244  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-----CCEEEEEcCCCCCCcchhhhhhhh-c--cCCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG-----HPTFVLVRESTLSAPSKSQLLDHF-K--KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~   73 (263)
                      |+.|.++|||++.++|.+|+.+|++..     .++++++|+-++.+ +....+.++ .  ..+++++..|+++-.++.++
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae-~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A   79 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAE-AVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRA   79 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHH-HHHHHHHHhCCCceeEEEEEEEehhhHHHHHHH
Confidence            445789999999999999999999864     34777788843321 111112222 1  23578899999998776655


Q ss_pred             h-------cCcCEEEEcCCCcc
Q 044721           74 I-------KQVDVVISTVGHTL   88 (263)
Q Consensus        74 ~-------~~~d~vv~~a~~~~   88 (263)
                      .       +++|.|+-|||...
T Consensus        80 ~~di~~rf~~ld~iylNAg~~~  101 (341)
T KOG1478|consen   80 SKDIKQRFQRLDYIYLNAGIMP  101 (341)
T ss_pred             HHHHHHHhhhccEEEEccccCC
Confidence            4       47899999999875

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.41  E-value=1.9e-06  Score=73.31  Aligned_cols=81  Identities=17%  Similarity=0.147  Sum_probs=54.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-------CCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-------HPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +.+|+||||+|++|++++..|+..+       .++++++++...   ++.+. .-++.. .......|+....++.+.++
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~---~~~~g~~~Dl~d-~~~~~~~~~~~~~~~~~~l~   77 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL---KALEGVVMELQD-CAFPLLKSVVATTDPEEAFK   77 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc---ccccceeeehhh-ccccccCCceecCCHHHHhC
Confidence            4589999999999999999999854       489999997421   11110 001100 00011235444566778899


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|+|||+||...
T Consensus        78 ~aDiVI~tAG~~~   90 (325)
T cd01336          78 DVDVAILVGAMPR   90 (325)
T ss_pred             CCCEEEEeCCcCC
Confidence            9999999999865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.35  E-value=1.8e-06  Score=71.44  Aligned_cols=77  Identities=21%  Similarity=0.229  Sum_probs=63.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      ..++|.||+||.|.-++++|+.+|.+-.+..|+     ..++..+....+++...  .++.+++.+++++++.++|+||+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs-----~~kl~~l~~~LG~~~~~--~p~~~p~~~~~~~~~~~VVlncv   79 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRS-----SAKLDALRASLGPEAAV--FPLGVPAALEAMASRTQVVLNCV   79 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCC-----HHHHHHHHHhcCccccc--cCCCCHHHHHHHHhcceEEEecc
Confidence            469999999999999999999999998888999     66766554444444443  45555999999999999999999


Q ss_pred             CCcc
Q 044721           85 GHTL   88 (263)
Q Consensus        85 ~~~~   88 (263)
                      |+..
T Consensus        80 GPyt   83 (382)
T COG3268          80 GPYT   83 (382)
T ss_pred             cccc
Confidence            9875

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.33  E-value=1.1e-06  Score=70.88  Aligned_cols=63  Identities=19%  Similarity=0.249  Sum_probs=45.9

Q ss_pred             CCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh-------cCcCEEEEcC
Q 044721           12 GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI-------KQVDVVISTV   84 (263)
Q Consensus        12 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~d~vv~~a   84 (263)
                      +||+||++++++|+++|++|+++++...      .   .   ..  ....+|+.+.+++++++       .++|++||||
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~------l---~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA------L---K---PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh------c---c---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4899999999999999999999876411      0   0   00  01346888877766554       3689999999


Q ss_pred             CCcc
Q 044721           85 GHTL   88 (263)
Q Consensus        85 ~~~~   88 (263)
                      |...
T Consensus        89 gv~d   92 (227)
T TIGR02114        89 AVSD   92 (227)
T ss_pred             Eecc
Confidence            9754

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.26  E-value=3.2e-06  Score=71.77  Aligned_cols=72  Identities=25%  Similarity=0.317  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-C-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-G-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++||||+|+||+.+++.|+++ | .+++++.|+     ..+...+...      ...+|+   .++.+++.++|+|
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~-----~~rl~~La~e------l~~~~i---~~l~~~l~~aDiV  219 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQ-----QERLQELQAE------LGGGKI---LSLEEALPEADIV  219 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCC-----HHHHHHHHHH------hccccH---HhHHHHHccCCEE
Confidence            5689999999999999999999864 5 588888887     3333322111      112333   3466888899999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      ||+++...
T Consensus       220 v~~ts~~~  227 (340)
T PRK14982        220 VWVASMPK  227 (340)
T ss_pred             EECCcCCc
Confidence            99998754

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.24  E-value=1.8e-05  Score=63.81  Aligned_cols=96  Identities=25%  Similarity=0.463  Sum_probs=71.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      |+++|.|+ |.+|+.+++.|.++|++|++++++     +++.+.... ......++.+|-+|++.++++ +..+|+++-.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d-----~~~~~~~~~-~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRD-----EERVEEFLA-DELDTHVVIGDATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcC-----HHHHHHHhh-hhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence            67899995 999999999999999999999999     444332111 024578999999999999998 8899999998


Q ss_pred             CCCccchhHHHHHHHH-HHhCCcceeee
Q 044721           84 VGHTLLGDQVKIIAAI-KEAGNIKRFFP  110 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~-~~~~~~~~~i~  110 (263)
                      .+.....  .-+...+ ++.+ +++++.
T Consensus        74 t~~d~~N--~i~~~la~~~~g-v~~via   98 (225)
T COG0569          74 TGNDEVN--SVLALLALKEFG-VPRVIA   98 (225)
T ss_pred             eCCCHHH--HHHHHHHHHhcC-CCcEEE
Confidence            8865321  1222233 3457 888874

>PRK05086 malate dehydrogenase; Provisional

Probab=98.21  E-value=1.3e-05  Score=67.90  Aligned_cols=98  Identities=15%  Similarity=0.174  Sum_probs=64.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-C--CCCEEEEEcCCCCCCcchhhhhhhhcc-CCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVK-A--GHPTFVLVRESTLSAPSKSQLLDHFKK-LGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |+|+|+||+|.+|++++..|.. .  ++++++++|++. ......    ++.. .....+.+  .+.+++.+.++++|+|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~al----Dl~~~~~~~~i~~--~~~~d~~~~l~~~DiV   73 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAV----DLSHIPTAVKIKG--FSGEDPTPALEGADVV   73 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceeh----hhhcCCCCceEEE--eCCCCHHHHcCCCCEE
Confidence            6899999999999999998865 2  357888887732 101011    1111 11122333  2234555677899999


Q ss_pred             EEcCCCccc-------------hhHHHHHHHHHHhCCcceeee
Q 044721           81 ISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      |.++|..+-             ....++++++.+.+ .+++++
T Consensus        74 IitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivi  115 (312)
T PRK05086         74 LISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIG  115 (312)
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence            999998651             13567888888888 887764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.20  E-value=8.4e-06  Score=64.43  Aligned_cols=138  Identities=16%  Similarity=0.176  Sum_probs=93.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCC-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh--cCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHP-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI--KQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~   79 (263)
                      ..+|||||+-|.+|..++..|... |.+ |++.+.-+..         +.. -..-.++..|+.|..++++.+  +++|-
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp---------~~V-~~~GPyIy~DILD~K~L~eIVVn~RIdW  113 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP---------ANV-TDVGPYIYLDILDQKSLEEIVVNKRIDW  113 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc---------hhh-cccCCchhhhhhccccHHHhhcccccce
Confidence            358999999999999999999865 654 5554433211         001 122356788999999998876  37999


Q ss_pred             EEEcCCCcc--------------chhHHHHHHHHHHhCCcceeeeccccC---CCCccc-----cCCCCchHHHHHHHHH
Q 044721           80 VISTVGHTL--------------LGDQVKIIAAIKEAGNIKRFFPSEFGN---DVDRVH-----AVEPAKSAFATKAKIR  137 (263)
Q Consensus        80 vv~~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~S~~g~---~~~~~~-----~~~~~~~~~~~k~~~e  137 (263)
                      +||..+...              ..+..|+++.+.+++ .+.|+.|.+|.   ...++.     -..|..-|+.+|..+|
T Consensus       114 L~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAE  192 (366)
T KOG2774|consen  114 LVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAE  192 (366)
T ss_pred             eeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHH
Confidence            999754332              456789999999999 89898776554   222211     1235778999999887


Q ss_pred             HHHH----HcCCCEEEEec
Q 044721          138 RAVE----AEGIPYTYGDV  152 (263)
Q Consensus       138 ~~~~----~~~~~~~~gr~  152 (263)
                      -+=+    +.|+++.-.|+
T Consensus       193 L~GEy~~hrFg~dfr~~rf  211 (366)
T KOG2774|consen  193 LLGEYFNHRFGVDFRSMRF  211 (366)
T ss_pred             HHHHHHHhhcCccceeccc
Confidence            5543    45666554443

>cd00704 MDH Malate dehydrogenase

Probab=98.19  E-value=1.7e-05  Score=67.45  Aligned_cols=83  Identities=17%  Similarity=0.117  Sum_probs=56.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-C------CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-----------
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG-H------PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-----------   67 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g-~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------   67 (263)
                      +|.|+||+|.+|+.++..|+..| .      ++++++++...   ++.           .....|+.|.           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---~~~-----------~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---KAL-----------EGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---Ccc-----------ceeeeehhhhcccccCCcEEe
Confidence            78999999999999999999876 2      38999987410   111           1112222222           


Q ss_pred             HHHHHHhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHh
Q 044721           68 ESLVKAIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEA  102 (263)
Q Consensus        68 ~~~~~~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~  102 (263)
                      .+..+.++++|+||++||....             ...+++.+.+.+.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~  115 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV  115 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence            3446788999999999998751             2245666777776

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.17  E-value=8.3e-06  Score=70.85  Aligned_cols=74  Identities=22%  Similarity=0.272  Sum_probs=56.0

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      +++++++||||                ||.+|.+++++|.++|++|+++.++....          . ..  .....|+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~--~~~~~~v~  249 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PP--GVKSIKVS  249 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CC--CcEEEEec
Confidence            45789999998                35699999999999999999988764211          0 11  22457888


Q ss_pred             CHHHH-HHHh----cCcCEEEEcCCCcc
Q 044721           66 NHESL-VKAI----KQVDVVISTVGHTL   88 (263)
Q Consensus        66 ~~~~~-~~~~----~~~d~vv~~a~~~~   88 (263)
                      +.+++ +.++    .++|++|++||...
T Consensus       250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       250 TAEEMLEAALNELAKDFDIFISAAAVAD  277 (390)
T ss_pred             cHHHHHHHHHHhhcccCCEEEEcccccc
Confidence            88777 4444    36899999999875

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.13  E-value=1.8e-05  Score=70.67  Aligned_cols=90  Identities=20%  Similarity=0.310  Sum_probs=62.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +++|+++|+|+++ +|..+++.|++.|++|++.+++...   ...+..+.+...++.++.+|..+     +...++|+||
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~---~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv   73 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED---QLKEALEELGELGIELVLGEYPE-----EFLEGVDLVV   73 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEE
Confidence            4578999999755 9999999999999999999887421   11111233333357778888876     2356799999


Q ss_pred             EcCCCccchhHHHHHHHHHHhC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +++|....   ...+..+.+.+
T Consensus        74 ~~~g~~~~---~~~~~~a~~~~   92 (450)
T PRK14106         74 VSPGVPLD---SPPVVQAHKKG   92 (450)
T ss_pred             ECCCCCCC---CHHHHHHHHCC
Confidence            99987532   23455555555

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.13  E-value=5.4e-05  Score=72.97  Aligned_cols=90  Identities=23%  Similarity=0.168  Sum_probs=69.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CC-------------EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HP-------------TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES   69 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   69 (263)
                      +++|+|.|+ |++|+..++.|++.. ++             |++.+++     .+..+.+... .+++..++.|+.|.++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~-----~~~a~~la~~-~~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLY-----LKDAKETVEG-IENAEAVQLDVSDSES  641 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCC-----HHHHHHHHHh-cCCCceEEeecCCHHH
Confidence            678999996 999999999998753 34             7777777     3333322221 1367789999999999


Q ss_pred             HHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           70 LVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        70 ~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +.++++++|+||++.+..   .+..++++|.++|
T Consensus       642 L~~~v~~~DaVIsalP~~---~H~~VAkaAieaG  672 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPAS---CHAVVAKACIELK  672 (1042)
T ss_pred             HHHhhcCCCEEEECCCch---hhHHHHHHHHHcC
Confidence            999999999999999874   3566788888887

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.10  E-value=1.3e-05  Score=59.31  Aligned_cols=75  Identities=20%  Similarity=0.418  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|.|+ |+.|+.++..|.+.|++ |+++.|+     .++.+.+ +.+....+..+  ++.   ++.+.+.++|+|
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt-----~~ra~~l~~~~~~~~~~~~--~~~---~~~~~~~~~Div   79 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRT-----PERAEALAEEFGGVNIEAI--PLE---DLEEALQEADIV   79 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESS-----HHHHHHHHHHHTGCSEEEE--EGG---GHCHHHHTESEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECC-----HHHHHHHHHHcCcccccee--eHH---HHHHHHhhCCeE
Confidence            5789999996 99999999999999986 9999999     5555533 33322334444  333   334667789999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |++.+...
T Consensus        80 I~aT~~~~   87 (135)
T PF01488_consen   80 INATPSGM   87 (135)
T ss_dssp             EE-SSTTS
T ss_pred             EEecCCCC
Confidence            99988764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.04  E-value=3.4e-05  Score=65.84  Aligned_cols=92  Identities=21%  Similarity=0.268  Sum_probs=57.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEE--EEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |++|++|+|+||||++|+.+++.|.++++.+.-  ..++.+.. -...   . +  .+   ...++.+.+.. + ++++|
T Consensus         1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-G~~l---~-~--~~---~~l~~~~~~~~-~-~~~vD   68 (336)
T PRK05671          1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESA-GHSV---P-F--AG---KNLRVREVDSF-D-FSQVQ   68 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-CCee---c-c--CC---cceEEeeCChH-H-hcCCC
Confidence            677789999999999999999999988765332  22232111 0011   1 1  11   12333332221 2 57899


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|.+++.   .....+++.+.+.| ++ +|
T Consensus        69 ~vFla~p~---~~s~~~v~~~~~~G-~~-VI   94 (336)
T PRK05671         69 LAFFAAGA---AVSRSFAEKARAAG-CS-VI   94 (336)
T ss_pred             EEEEcCCH---HHHHHHHHHHHHCC-Ce-EE
Confidence            99998874   34566888888887 54 44

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.95  E-value=2e-05  Score=62.07  Aligned_cols=138  Identities=12%  Similarity=0.086  Sum_probs=94.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVG   85 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~   85 (263)
                      ..++.|+.|+.|+++++.-...+++|.++.|+..+...      +.. ...+.++++|.....-....+.++..++.+++
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l------~sw-~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g  126 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTL------SSW-PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG  126 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchh------hCC-CcccchhhccccccCcchhhhcCCcccHHHhc
Confidence            57899999999999999999999999999998542111      111 34577888888765545556667888888887


Q ss_pred             Ccc---------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHH-HcCCCEEEEeccC
Q 044721           86 HTL---------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVE-AEGIPYTYGDVLN  154 (263)
Q Consensus        86 ~~~---------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~-~~~~~~~~gr~~n  154 (263)
                      ...         -+...+..+++.+.+ +++|++ |.-....   .+.. ..+|+.+|+++|.-+. ..+..-++.|.-.
T Consensus       127 gfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~---~~~i-~rGY~~gKR~AE~Ell~~~~~rgiilRPGF  201 (283)
T KOG4288|consen  127 GFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGL---PPLI-PRGYIEGKREAEAELLKKFRFRGIILRPGF  201 (283)
T ss_pred             CccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCC---CCcc-chhhhccchHHHHHHHHhcCCCceeeccce
Confidence            664         123456788889999 999985 5321111   0111 4579999999997763 4455555666444


Q ss_pred             c
Q 044721          155 H  155 (263)
Q Consensus       155 ~  155 (263)
                      +
T Consensus       202 i  202 (283)
T KOG4288|consen  202 I  202 (283)
T ss_pred             e
Confidence            3

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.93  E-value=4.6e-05  Score=59.33  Aligned_cols=74  Identities=20%  Similarity=0.350  Sum_probs=46.7

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      +.+|+||||+|                ||..|.+|++++..+|++|+++..+..-.           ...++..+.  +.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~i~--v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-----------PPPGVKVIR--VE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE---S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-----------ccccceEEE--ec
Confidence            35788888875                79999999999999999999988773210           022455554  44


Q ss_pred             CHHH----HHHHhcCcCEEEEcCCCcc
Q 044721           66 NHES----LVKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        66 ~~~~----~~~~~~~~d~vv~~a~~~~   88 (263)
                      ..++    +.+.+++.|++|++|+...
T Consensus        68 sa~em~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   68 SAEEMLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             SHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred             chhhhhhhhccccCcceeEEEecchhh
Confidence            4443    4455567899999999876

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.92  E-value=0.0001  Score=63.17  Aligned_cols=88  Identities=19%  Similarity=0.315  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCC---EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +++|+|.||||++|+.+++.|.+++|.   ++.+.++.+.     .+.+. +  .+......|+.+.     .++++|++
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-----g~~l~-~--~g~~i~v~d~~~~-----~~~~vDvV   67 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA-----GKELS-F--KGKELKVEDLTTF-----DFSGVDIA   67 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-----CCeee-e--CCceeEEeeCCHH-----HHcCCCEE
Confidence            468999999999999999999998875   4666665321     11111 1  1234444566432     34689999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |.++|..   ....+.+...+.| . .+|
T Consensus        68 f~A~g~g---~s~~~~~~~~~~G-~-~VI   91 (334)
T PRK14874         68 LFSAGGS---VSKKYAPKAAAAG-A-VVI   91 (334)
T ss_pred             EECCChH---HHHHHHHHHHhCC-C-EEE
Confidence            9998754   4566677777777 5 444

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.89  E-value=0.00016  Score=64.57  Aligned_cols=94  Identities=19%  Similarity=0.294  Sum_probs=69.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      |+++|+|+ |.+|+++++.|.+.|++|++++++     +++.+.+..  ..++.++.+|.++...++++ ++++|.+|.+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~-----~~~~~~~~~--~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTD-----EERLRRLQD--RLDVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECC-----HHHHHHHHh--hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            57999996 999999999999999999999998     444432221  13578899999999999988 8899999988


Q ss_pred             CCCccchhHHHHHHHHHHh-CCcceee
Q 044721           84 VGHTLLGDQVKIIAAIKEA-GNIKRFF  109 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~-~~~~~~i  109 (263)
                      .+...  ....+...+++. + ..+++
T Consensus        73 ~~~~~--~n~~~~~~~r~~~~-~~~ii   96 (453)
T PRK09496         73 TDSDE--TNMVACQIAKSLFG-APTTI   96 (453)
T ss_pred             cCChH--HHHHHHHHHHHhcC-CCeEE
Confidence            76532  223344555554 5 45554

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.83  E-value=0.00017  Score=61.33  Aligned_cols=83  Identities=14%  Similarity=0.140  Sum_probs=56.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH----------
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE----------   68 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------   68 (263)
                      +|.|+|++|.+|+.++..|+..+.       +++++++++..   ++           ......|+.|..          
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---~~-----------a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---KV-----------LEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---cc-----------cceeEeehhcccchhcCceecc
Confidence            589999999999999999998652       48899986421   01           112223333322          


Q ss_pred             -HHHHHhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHh
Q 044721           69 -SLVKAIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEA  102 (263)
Q Consensus        69 -~~~~~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~  102 (263)
                       +..+.++++|+||++||....             ...+.+.+.+.+.
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~  114 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL  114 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence             335788899999999998642             1235666667666

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.80  E-value=7.4e-05  Score=64.88  Aligned_cols=92  Identities=20%  Similarity=0.307  Sum_probs=58.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH-HhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK-AIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vv   81 (263)
                      +++|.|.||||++|+.+++.|+++ .++++.+.++.+.     .+.+..   ........|..+.++++. .++++|++|
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-----G~~i~~---~~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA-----GQSFGS---VFPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-----CCCchh---hCccccCccccceecCCHHHhcCCCEEE
Confidence            468999999999999999999998 5788888876321     111111   011222234433333332 257899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .+.+..   ...++++.+ +.+  .++|
T Consensus       110 ~Alp~~---~s~~i~~~~-~~g--~~VI  131 (381)
T PLN02968        110 CCLPHG---TTQEIIKAL-PKD--LKIV  131 (381)
T ss_pred             EcCCHH---HHHHHHHHH-hCC--CEEE
Confidence            988753   556777776 455  3455

>PRK04148 hypothetical protein; Provisional

Probab=97.78  E-value=0.00038  Score=50.90  Aligned_cols=92  Identities=18%  Similarity=0.222  Sum_probs=71.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ++++++.| .| -|.+++..|.+.|++|++++.+     +...+..+   ...+.++..|+.+++-  +.-+++|.|+..
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~-----~~aV~~a~---~~~~~~v~dDlf~p~~--~~y~~a~liysi   84 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESGFDVIVIDIN-----EKAVEKAK---KLGLNAFVDDLFNPNL--EIYKNAKLIYSI   84 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HhCCeEEECcCCCCCH--HHHhcCCEEEEe
Confidence            46899999 57 8999999999999999999999     44443222   3357899999998762  455689999887


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceeee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      =.+.  +....+++-+++.+ ...+|.
T Consensus        85 rpp~--el~~~~~~la~~~~-~~~~i~  108 (134)
T PRK04148         85 RPPR--DLQPFILELAKKIN-VPLIIK  108 (134)
T ss_pred             CCCH--HHHHHHHHHHHHcC-CCEEEE
Confidence            6654  45567888888888 888774

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.77  E-value=0.0002  Score=53.41  Aligned_cols=93  Identities=20%  Similarity=0.248  Sum_probs=58.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhh-h---hhhhc-cCCcEEEEccCCCHHHHHHHhcCc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQ-L---LDHFK-KLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~---~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |||.|+|++|.+|++++..|...+  .++++++++.     .+.+ .   +++.. .......... .+    .+.++++
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~-----~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~a   70 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINE-----DKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDA   70 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSH-----HHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCc-----ccceeeehhhhhhhhhccccccccc-cc----ccccccc
Confidence            689999999999999999999987  4699999983     3322 1   11111 1111111111 22    2457789


Q ss_pred             CEEEEcCCCccc-------------hhHHHHHHHHHHhCCccee
Q 044721           78 DVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        78 d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~  108 (263)
                      |++|.++|....             ...+.+.+.+.+.+ .+-+
T Consensus        71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~  113 (141)
T PF00056_consen   71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAI  113 (141)
T ss_dssp             SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSE
T ss_pred             cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccE
Confidence            999999998641             12345566666665 4433

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.75  E-value=0.00047  Score=61.60  Aligned_cols=97  Identities=21%  Similarity=0.346  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH-HhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK-AIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vv~   82 (263)
                      +++++|.|+ |.+|+.+++.|.+.|++|++++++     +++.+.+... ..++.++.+|.++++.+++ .++++|.++.
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~-----~~~~~~~~~~-~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERD-----PERAEELAEE-LPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHH-CCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            578999996 999999999999999999999988     4444332221 2467889999999998865 4578999987


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      +.+...  ........+++.+ .++++.
T Consensus       304 ~~~~~~--~n~~~~~~~~~~~-~~~ii~  328 (453)
T PRK09496        304 LTNDDE--ANILSSLLAKRLG-AKKVIA  328 (453)
T ss_pred             CCCCcH--HHHHHHHHHHHhC-CCeEEE
Confidence            766432  2222334456667 776663

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.75  E-value=0.00038  Score=59.61  Aligned_cols=102  Identities=23%  Similarity=0.316  Sum_probs=68.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---CC-------------cchhh----hhhhh-ccCCcEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---SA-------------PSKSQ----LLDHF-KKLGVNLV   60 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~-------------~~~~~----~~~~~-~~~~~~~~   60 (263)
                      +.++|+|.|+ |++|+++++.|++.|. ++++++++.-.   ..             ..|.+    .+..+ ..-+++.+
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~  101 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV  101 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence            4578999995 9999999999999997 78888887411   00             11211    12222 11234556


Q ss_pred             EccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           61 IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        61 ~~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ..|++ .+.++++++++|+||.+....  .....+-+.+.+.+ ++.+.
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~D~~--~~r~~in~~~~~~~-ip~i~  146 (338)
T PRK12475        102 VTDVT-VEELEELVKEVDLIIDATDNF--DTRLLINDLSQKYN-IPWIY  146 (338)
T ss_pred             eccCC-HHHHHHHhcCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            66775 457788899999999998543  33344556777888 88776

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.73  E-value=0.00017  Score=56.59  Aligned_cols=90  Identities=22%  Similarity=0.199  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ||++.|.| +|.||+.++++|++.||+|++.+|+.    +++.+.......+.        -...+.+++.+.+|+||-.
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~----~~~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRG----PKALAAAAAALGPL--------ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCC----hhHHHHHHHhhccc--------cccCChHHHHhcCCEEEEe
Confidence            35666666 89999999999999999999987774    33333222222222        1233445677789999998


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceeee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ......   ..+++.....- -.++++
T Consensus        68 VP~~a~---~~v~~~l~~~~-~~KIvI   90 (211)
T COG2085          68 VPFEAI---PDVLAELRDAL-GGKIVI   90 (211)
T ss_pred             ccHHHH---HhHHHHHHHHh-CCeEEE
Confidence            876543   33444444432 235554

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.71  E-value=0.00068  Score=49.09  Aligned_cols=93  Identities=24%  Similarity=0.383  Sum_probs=52.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      ||.|.||||++|+.+++.|++.- ++++.+..+............... ...-.....| .+.+    .++++|++|.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~-~~~~----~~~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP-KGFEDLSVED-ADPE----ELSDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG-TTTEEEBEEE-TSGH----HHTTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc-ccccceeEee-cchh----HhhcCCEEEecC
Confidence            68999999999999999999954 454444433221101111111111 0111111122 3333    347899999998


Q ss_pred             CCccchhHHHHHHHHHHhCCcceee
Q 044721           85 GHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        85 ~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +..   ....+.+.+.+.| + ++|
T Consensus        75 ~~~---~~~~~~~~~~~~g-~-~Vi   94 (121)
T PF01118_consen   75 PHG---ASKELAPKLLKAG-I-KVI   94 (121)
T ss_dssp             CHH---HHHHHHHHHHHTT-S-EEE
T ss_pred             chh---HHHHHHHHHhhCC-c-EEE
Confidence            753   4567778888888 6 444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.70  E-value=0.00019  Score=61.63  Aligned_cols=93  Identities=15%  Similarity=0.185  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEE-EccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV-IGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |++|+|.||||++|+.+++.|.+. +++++.+.++.+.     .+.+... .+.+... ..++.+.+..  .++++|++|
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-----g~~l~~~-~~~~~~~~~~~~~~~~~~--~~~~vD~Vf   73 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-----GKPLSDV-HPHLRGLVDLVLEPLDPE--ILAGADVVF   73 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcccc-----CcchHHh-CcccccccCceeecCCHH--HhcCCCEEE
Confidence            379999999999999999999986 5777776654211     1101110 0111111 1223333322  457899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .+.+..   ...+++..+.+.|  .++|
T Consensus        74 ~alP~~---~~~~~v~~a~~aG--~~VI   96 (343)
T PRK00436         74 LALPHG---VSMDLAPQLLEAG--VKVI   96 (343)
T ss_pred             ECCCcH---HHHHHHHHHHhCC--CEEE
Confidence            988753   5567777777766  4555

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.70  E-value=0.00039  Score=50.63  Aligned_cols=94  Identities=17%  Similarity=0.245  Sum_probs=56.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVK-AGHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|+|.|++|.+|+.+++.+.+ .++++... +|+++...   .+...++.+..    ...+.-.++++++++.+|++|.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~---g~d~g~~~~~~----~~~~~v~~~l~~~~~~~DVvID   73 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV---GKDVGELAGIG----PLGVPVTDDLEELLEEADVVID   73 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT---TSBCHHHCTSS----T-SSBEBS-HHHHTTH-SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc---cchhhhhhCcC----CcccccchhHHHhcccCCEEEE
Confidence            5899999999999999999999 67776554 45532110   00001110000    0111112566778888999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ...   .......++.+.+++ ++.++
T Consensus        74 fT~---p~~~~~~~~~~~~~g-~~~Vi   96 (124)
T PF01113_consen   74 FTN---PDAVYDNLEYALKHG-VPLVI   96 (124)
T ss_dssp             ES----HHHHHHHHHHHHHHT--EEEE
T ss_pred             cCC---hHHhHHHHHHHHhCC-CCEEE
Confidence            873   345667788888888 66554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.67  E-value=0.00018  Score=54.44  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|+|+ |.+|+.+++.|.+.| ++|++++|+     .++.+. .+.+. ..  .+..+..+.   .+.++++|+|
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~-----~~~~~~~~~~~~-~~--~~~~~~~~~---~~~~~~~Dvv   85 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRT-----LEKAKALAERFG-EL--GIAIAYLDL---EELLAEADLI   85 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHHh-hc--ccceeecch---hhccccCCEE
Confidence            4678999996 999999999999996 789999988     333332 12221 11  012233333   3447889999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |++.+...
T Consensus        86 i~~~~~~~   93 (155)
T cd01065          86 INTTPVGM   93 (155)
T ss_pred             EeCcCCCC
Confidence            99998764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.63  E-value=0.0004  Score=49.76  Aligned_cols=92  Identities=26%  Similarity=0.426  Sum_probs=66.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVISTVG   85 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~a~   85 (263)
                      ++|.|. |.+|+.+++.|.+.+.+|++++++     ++..+.   +...++.++.+|.++++.++++ +++++.++-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d-----~~~~~~---~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRD-----PERVEE---LREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESS-----HHHHHH---HHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECC-----cHHHHH---HHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578885 899999999999977799999999     544432   2344588999999999999874 678999998877


Q ss_pred             CccchhHHHHHHHHHHhCCcceee
Q 044721           86 HTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        86 ~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ..  .....++..+++.+...+++
T Consensus        72 ~d--~~n~~~~~~~r~~~~~~~ii   93 (116)
T PF02254_consen   72 DD--EENLLIALLARELNPDIRII   93 (116)
T ss_dssp             SH--HHHHHHHHHHHHHTTTSEEE
T ss_pred             CH--HHHHHHHHHHHHHCCCCeEE
Confidence            43  34445566666644133444

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.60  E-value=0.0011  Score=54.14  Aligned_cols=95  Identities=21%  Similarity=0.218  Sum_probs=76.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      +++|+|.|||+ =|+.+++.|.+.|++|++..-.....          .....+.++.+-+.+.+++.+.++  +++.||
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI   70 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI   70 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC----------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence            46899999864 69999999999999888766543211          112356778888889999999997  899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ...-+......+++.++|.+.+ ++.+=+
T Consensus        71 DATHPfA~~is~~a~~ac~~~~-ipyiR~   98 (248)
T PRK08057         71 DATHPYAAQISANAAAACRALG-IPYLRL   98 (248)
T ss_pred             ECCCccHHHHHHHHHHHHHHhC-CcEEEE
Confidence            9999888888899999999999 886643

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.58  E-value=0.0011  Score=56.93  Aligned_cols=101  Identities=23%  Similarity=0.344  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---C-------------Ccchhh----hhhhhccCC--cEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---S-------------APSKSQ----LLDHFKKLG--VNL   59 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~-------------~~~~~~----~~~~~~~~~--~~~   59 (263)
                      +.++|+|.|+ |++|+.+++.|++.|. ++++++++.-.   .             ...|.+    .+..+ .+.  ++.
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i-np~v~v~~  100 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI-NSDVRVEA  100 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH-CCCcEEEE
Confidence            3568999996 9999999999999997 89999886311   0             001211    11222 233  445


Q ss_pred             EEccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           60 VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        60 ~~~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +..+++ ++.+.+++++.|+||.+....  .....+-+.+.+.+ ++.+.
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn~--~~r~~ln~~~~~~~-iP~i~  146 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATDNF--ETRFIVNDAAQKYG-IPWIY  146 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHhC-CCEEE
Confidence            556664 456778899999999986643  34445667788888 88766

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.57  E-value=0.0011  Score=56.18  Aligned_cols=80  Identities=18%  Similarity=0.228  Sum_probs=48.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCC--CCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRES--TLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |+|.|+|++|.+|+.++..|+..|.  +|++++|+.  ........+..+.+....... ....++  + .+.++++|++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d-~~~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--D-LSDVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--C-HHHhCCCCEE
Confidence            6899999999999999999999986  499999953  111111111111111111111 111111  1 2348899999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |.++|...
T Consensus        77 iitag~p~   84 (309)
T cd05294          77 IITAGVPR   84 (309)
T ss_pred             EEecCCCC
Confidence            99999654

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.56  E-value=0.0007  Score=58.38  Aligned_cols=100  Identities=17%  Similarity=0.187  Sum_probs=57.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhh-----hccCCcEEEEccCCCHHHHHHHhcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDH-----FKKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      ++++|+|+||||++|+.+++.|.+... +++.+.++.+............     +.. ...-....-.+++.    +++
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~----~~~   76 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPE-EVADMEVVSTDPEA----VDD   76 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccc-cccceEEEeCCHHH----hcC
Confidence            358999999999999999999997754 7777755532211111000000     000 00001111223333    358


Q ss_pred             cCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           77 VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      +|+++.+.+..   ....+.+.+.+.| ++.+..|
T Consensus        77 ~DvVf~a~p~~---~s~~~~~~~~~~G-~~vIDls  107 (349)
T PRK08664         77 VDIVFSALPSD---VAGEVEEEFAKAG-KPVFSNA  107 (349)
T ss_pred             CCEEEEeCChh---HHHHHHHHHHHCC-CEEEECC
Confidence            99998876653   3455667777888 7766654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.55  E-value=0.00029  Score=58.84  Aligned_cols=74  Identities=15%  Similarity=0.232  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++++|+|+ |++|++++..|.+.| .+|+++.|+     .++.+.+......... +..++    +..+.+.++|+||
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~-----~~~a~~l~~~~~~~~~-~~~~~----~~~~~~~~~DivI  190 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRT-----VERAEELAKLFGALGK-AELDL----ELQEELADFDLII  190 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhhhccc-eeecc----cchhccccCCEEE
Confidence            4678999996 999999999999999 689999998     4444322221111110 11111    2235567899999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      |+.+..
T Consensus       191 naTp~g  196 (278)
T PRK00258        191 NATSAG  196 (278)
T ss_pred             ECCcCC
Confidence            998755

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.50  E-value=0.00065  Score=60.66  Aligned_cols=130  Identities=15%  Similarity=0.156  Sum_probs=72.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vv   81 (263)
                      .+++++|||++| +|.++++.|++.|++|++.+++....    ......+...++.+..++.  +..   .+. ++|.||
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~----~~~~~~l~~~g~~~~~~~~--~~~---~~~~~~d~vV   73 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSE----NPEAQELLEEGIKVICGSH--PLE---LLDEDFDLMV   73 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccc----hhHHHHHHhcCCEEEeCCC--CHH---HhcCcCCEEE
Confidence            578999999865 99999999999999999988764221    1111222233444443322  222   133 489999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeeeccccCC--CCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGND--VDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~--~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      ++.|...   ...+++++.+.+ ++.+--..+...  ......+...++-..++..+.++++..+..
T Consensus        74 ~s~gi~~---~~~~~~~a~~~~-i~v~~~~el~~~~~~~~~I~VTGT~GKTTTt~ll~~iL~~~g~~  136 (447)
T PRK02472         74 KNPGIPY---TNPMVEKALEKG-IPIITEVELAYLISEAPIIGITGSNGKTTTTTLIGEMLKAGGQH  136 (447)
T ss_pred             ECCCCCC---CCHHHHHHHHCC-CcEEeHHHHHHHhcCCCEEEEeCCCchHHHHHHHHHHHHHCCCC
Confidence            9998763   223566666666 443311111000  000111111333445677777777766543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.47  E-value=0.0013  Score=52.23  Aligned_cols=105  Identities=18%  Similarity=0.197  Sum_probs=67.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---C-----------Ccchhhhh-hhhc--cCCc--EEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---S-----------APSKSQLL-DHFK--KLGV--NLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~-----------~~~~~~~~-~~~~--~~~~--~~~~~   62 (263)
                      ..++|+|.| .|++|+.+++.|+..|. ++++++++.-.   .           ...|.+.+ +.+.  .+.+  ..+..
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~   98 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE   98 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence            356899999 59999999999999996 79988877311   0           01121111 1111  2333  33333


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ++ +.+.+.+.+++.|+||.+....  .....+-+.+.+.+ ++.+..+.
T Consensus        99 ~i-~~~~~~~~~~~~D~Vi~~~d~~--~~r~~l~~~~~~~~-ip~i~~~~  144 (202)
T TIGR02356        99 RV-TAENLELLINNVDLVLDCTDNF--ATRYLINDACVALG-TPLISAAV  144 (202)
T ss_pred             cC-CHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEEe
Confidence            44 4456778899999999987543  34445667778888 77665443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.46  E-value=0.0023  Score=54.31  Aligned_cols=98  Identities=17%  Similarity=0.232  Sum_probs=60.6

Q ss_pred             CCC--CCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhcc--CCcEEEEccCCCHHHHHHHh
Q 044721            1 MAS--KSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKK--LGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         1 m~~--~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ||+  ++||.|+|+ |.+|+.++..|+..|.  ++++++++.........+ +++...  .++.+..   .+    .+.+
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~D-l~~~~~~~~~~~i~~---~~----~~~~   71 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMD-LSHAVPFTSPTKIYA---GD----YSDC   71 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHH-HHhhccccCCeEEEe---CC----HHHh
Confidence            553  579999997 9999999999999985  699999974332111111 111100  1222221   12    2457


Q ss_pred             cCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCccee
Q 044721           75 KQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~  108 (263)
                      +++|++|.+||....             ...+.+++.+.+.+ .+-+
T Consensus        72 ~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~  117 (315)
T PRK00066         72 KDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGI  117 (315)
T ss_pred             CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence            899999999998641             11355566666665 4433

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.46  E-value=0.00052  Score=57.46  Aligned_cols=71  Identities=21%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|. |.+|+.+++.|.+.|++|++..|+     +++......   .+...+     +.+++.+.++++|+||+
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~-----~~~~~~~~~---~g~~~~-----~~~~l~~~l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARS-----SADLARITE---MGLIPF-----PLNKLEEKVAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH---CCCeee-----cHHHHHHHhccCCEEEE
Confidence            4689999996 999999999999999999999998     333221111   122221     24556778889999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       216 t~P~~  220 (287)
T TIGR02853       216 TIPAL  220 (287)
T ss_pred             CCChH
Confidence            87643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.45  E-value=0.00082  Score=57.65  Aligned_cols=86  Identities=14%  Similarity=0.339  Sum_probs=56.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEE---EEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTF---VLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +|+|.||||++|+.+++.|.+++|+++   .+.++.+.     .+.+. +  .+......|+.     ...++++|++|.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~-----g~~~~-~--~~~~~~~~~~~-----~~~~~~~D~v~~   67 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSA-----GRKVT-F--KGKELEVNEAK-----IESFEGIDIALF   67 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC-----CCeee-e--CCeeEEEEeCC-----hHHhcCCCEEEE
Confidence            589999999999999999999887643   34454221     11111 1  12345555663     123578999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|..   ....+++...+.| + .+|
T Consensus        68 a~g~~---~s~~~a~~~~~~G-~-~VI   89 (339)
T TIGR01296        68 SAGGS---VSKEFAPKAAKCG-A-IVI   89 (339)
T ss_pred             CCCHH---HHHHHHHHHHHCC-C-EEE
Confidence            99865   4556677777777 6 355

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.40  E-value=0.00057  Score=56.80  Aligned_cols=72  Identities=21%  Similarity=0.353  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +++++|+|+ |++|++++..|++.|++|+++.|+     .++.+.+ +.+..... ....++.+     ..+.++|+|||
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~-----~~~~~~la~~~~~~~~-~~~~~~~~-----~~~~~~DivIn  184 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRT-----VSKAEELAERFQRYGE-IQAFSMDE-----LPLHRVDLIIN  184 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhcCc-eEEechhh-----hcccCccEEEE
Confidence            678999997 899999999999999999999988     3333322 22211111 11112111     12457999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       185 atp~g  189 (270)
T TIGR00507       185 ATSAG  189 (270)
T ss_pred             CCCCC
Confidence            98864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.40  E-value=0.00076  Score=54.24  Aligned_cols=73  Identities=29%  Similarity=0.287  Sum_probs=48.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-----hccCCc--EEEEccCCCHHHHHHHhcCc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-----FKKLGV--NLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~--~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |+|.|+||+|.+|+.++..|++.|++|++.+|++     ++.+.+..     +...++  ....   .   +..++++..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~-----~~~~~l~~~~~~~~~~~g~~~~~~~---~---~~~ea~~~a   69 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL-----EKAEEAAAKALEELGHGGSDIKVTG---A---DNAEAAKRA   69 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH-----HHHHHHHHHHHhhccccCCCceEEE---e---ChHHHHhcC
Confidence            5799999999999999999999999999999884     33221111     111111  1111   1   124556789


Q ss_pred             CEEEEcCCCcc
Q 044721           78 DVVISTVGHTL   88 (263)
Q Consensus        78 d~vv~~a~~~~   88 (263)
                      |+||.+.....
T Consensus        70 DvVilavp~~~   80 (219)
T TIGR01915        70 DVVILAVPWDH   80 (219)
T ss_pred             CEEEEECCHHH
Confidence            99999887654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.40  E-value=0.00089  Score=57.51  Aligned_cols=76  Identities=24%  Similarity=0.334  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d   78 (263)
                      .++.+||.||+|++|+..++.+...|+..+++.++     .++.+....+.   . -...|+.+++.++...+    ++|
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-----~e~~~l~k~lG---A-d~vvdy~~~~~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-----KEKLELVKKLG---A-DEVVDYKDENVVELIKKYTGKGVD  227 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-----cchHHHHHHcC---C-cEeecCCCHHHHHHHHhhcCCCcc
Confidence            46789999999999999999999999555555666     33444444442   2 23468888666665554    699


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +|+.|.|..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999975

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.39  E-value=0.0015  Score=49.93  Aligned_cols=33  Identities=36%  Similarity=0.423  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |++|.+.| .|.+|+.+++.|++.|++|++.+|+
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~   33 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRS   33 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESS
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccc
Confidence            57999999 5999999999999999999999998

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=97.38  E-value=0.0024  Score=52.18  Aligned_cols=97  Identities=28%  Similarity=0.324  Sum_probs=73.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+|+|.|||+ =|+.+++.|.+.|+ |++..-.+-.     .+... ...+...++.+-+.+.+.+.+.++  +++.||.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g-----~~~~~-~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID   72 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYG-----GELLK-PELPGLEVRVGRLGDEEGLAEFLRENGIDAVID   72 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhh-----Hhhhc-cccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            6899999864 69999999999998 6554433211     11000 012356788888889999999986  8999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ..-+......++..++|.+.+ ++.+=+
T Consensus        73 ATHPfA~~is~na~~a~~~~~-ipylR~   99 (249)
T PF02571_consen   73 ATHPFAAEISQNAIEACRELG-IPYLRF   99 (249)
T ss_pred             CCCchHHHHHHHHHHHHhhcC-cceEEE
Confidence            999888888899999999999 887643

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK08223 hypothetical protein; Validated

Probab=97.36  E-value=0.0026  Score=52.85  Aligned_cols=107  Identities=14%  Similarity=0.153  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---CC-----------cchhhhh-hhhc--cCC--cEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---SA-----------PSKSQLL-DHFK--KLG--VNLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~-----------~~~~~~~-~~~~--~~~--~~~~~~   62 (263)
                      ...+|+|.|+ |++|+.+++.|+..|. ++++++.+.-.   .+           ..|.+.+ +.+.  .+.  ++.+..
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~  104 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPE  104 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            3568999995 9999999999999995 78888766311   00           1122211 1111  233  344444


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      .++ ++.+.++++++|+||.+.-.........+-++|.+.+ ++.+.-+.
T Consensus       105 ~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~-iP~V~~~~  152 (287)
T PRK08223        105 GIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG-IPALTAAP  152 (287)
T ss_pred             ccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC-CCEEEEec
Confidence            454 4556788999999997765433344556667888888 77776433

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.36  E-value=0.002  Score=54.40  Aligned_cols=98  Identities=21%  Similarity=0.195  Sum_probs=61.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      |||.|+|++|.+|++++..|+..+  .++++++.+  ...-+.... ++.. ....+..  ....+++.+.++++|++|.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL-~~~~-~~~~i~~--~~~~~~~y~~~~daDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADL-SHIN-TPAKVTG--YLGPEELKKALKGADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHh-HhCC-CcceEEE--ecCCCchHHhcCCCCEEEE
Confidence            589999999999999999999888  478888887  211122211 1110 1112211  1012335678899999999


Q ss_pred             cCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +||...             ....+.+.+.+.+.+ .+-++
T Consensus        75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~v  113 (310)
T cd01337          75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALI  113 (310)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence            999864             112355666666666 55443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.35  E-value=0.0018  Score=53.38  Aligned_cols=87  Identities=17%  Similarity=0.126  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +++|+|+|++|.+|+.+++.+.+. +.+++.+ ++++..     ....          -..++...++++++++++|+||
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~-----~~~~----------~~~~i~~~~dl~~ll~~~DvVi   65 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSP-----LVGQ----------GALGVAITDDLEAVLADADVLI   65 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc-----cccc----------CCCCccccCCHHHhccCCCEEE
Confidence            368999999999999999998864 5776664 444221     1100          1123333345666677899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .++.+.   ....++..+.++| +..++
T Consensus        66 d~t~p~---~~~~~~~~al~~G-~~vvi   89 (257)
T PRK00048         66 DFTTPE---ATLENLEFALEHG-KPLVI   89 (257)
T ss_pred             ECCCHH---HHHHHHHHHHHcC-CCEEE
Confidence            888543   3466788888888 55443

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.34  E-value=0.001  Score=57.31  Aligned_cols=93  Identities=13%  Similarity=0.151  Sum_probs=54.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEE-EccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLV-IGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++|.|.||||++|+.+++.|.+. +++++.+ +++.+.  .+..   ... .+.+... ..++.+ .+.+++.+++|++|
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sa--gk~~---~~~-~~~l~~~~~~~~~~-~~~~~~~~~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESA--GKPV---SEV-HPHLRGLVDLNLEP-IDEEEIAEDADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhc--CCCh---HHh-CccccccCCceeec-CCHHHhhcCCCEEE
Confidence            48999999999999999999976 4677743 433211  0111   110 0111111 111221 12233445899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .+.+..   ...+++..+.+.|  .++|
T Consensus        74 ~alP~~---~s~~~~~~~~~~G--~~VI   96 (346)
T TIGR01850        74 LALPHG---VSAELAPELLAAG--VKVI   96 (346)
T ss_pred             ECCCch---HHHHHHHHHHhCC--CEEE
Confidence            998754   4567777777776  4455

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.34  E-value=0.0051  Score=45.85  Aligned_cols=102  Identities=21%  Similarity=0.301  Sum_probs=66.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC--------------CCcchhhh----hhhhccCC--cEEEEccC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQL----LDHFKKLG--VNLVIGDV   64 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--------------~~~~~~~~----~~~~~~~~--~~~~~~D~   64 (263)
                      +|+|.|. |++|+.+++.|+..|. ++++++.+.-.              ....|.+.    ++.+ .+.  +..+..++
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-~p~v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNEL-NPGVNVTAVPEGI   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHH-CCCcEEEEEeeec
Confidence            5889995 9999999999999997 68888765211              01122221    1222 233  33444455


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccc
Q 044721           65 LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEF  113 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~  113 (263)
                      .+. ...+.+++.|++|.+...  ......+.+.+.+.+ ++.+..+..
T Consensus        79 ~~~-~~~~~~~~~diVi~~~d~--~~~~~~l~~~~~~~~-i~~i~~~~~  123 (143)
T cd01483          79 SED-NLDDFLDGVDLVIDAIDN--IAVRRALNRACKELG-IPVIDAGGL  123 (143)
T ss_pred             Chh-hHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEcCC
Confidence            433 346778899999998876  345566778888888 777665443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.34  E-value=0.0024  Score=48.32  Aligned_cols=71  Identities=24%  Similarity=0.392  Sum_probs=47.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |+.+|+++|+| -|.+|+.+++.|...|.+|+++.++     +.+.  +++. -.+.++.        .+++++...|++
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~D-----Pi~a--lqA~-~dGf~v~--------~~~~a~~~adi~   82 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEID-----PIRA--LQAA-MDGFEVM--------TLEEALRDADIF   82 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SS-----HHHH--HHHH-HTT-EEE---------HHHHTTT-SEE
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECC-----hHHH--HHhh-hcCcEec--------CHHHHHhhCCEE
Confidence            45689999999 6999999999999999999999998     4222  2222 1233332        366788899999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |.+.|...
T Consensus        83 vtaTG~~~   90 (162)
T PF00670_consen   83 VTATGNKD   90 (162)
T ss_dssp             EE-SSSSS
T ss_pred             EECCCCcc
Confidence            99998765

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK05442 malate dehydrogenase; Provisional

Probab=97.33  E-value=0.0025  Score=54.27  Aligned_cols=95  Identities=18%  Similarity=0.090  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCC--CCcchhhhhhhh-c-cCCcEEEEccCCCHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTL--SAPSKSQLLDHF-K-KLGVNLVIGDVLNHES   69 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~   69 (263)
                      |-+++||.|+|++|.+|+.++..|+..|.       +++++++++..  ..-...+..+.. . ..++.+     +  ..
T Consensus         1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~   73 (326)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DD   73 (326)
T ss_pred             CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cC
Confidence            56788999999999999999999998762       68888886421  111111111110 0 011211     1  12


Q ss_pred             HHHHhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHh
Q 044721           70 LVKAIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEA  102 (263)
Q Consensus        70 ~~~~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~  102 (263)
                      ..+.++++|+||.+||...-             ...+++.+.+.++
T Consensus        74 ~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~  119 (326)
T PRK05442         74 PNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV  119 (326)
T ss_pred             hHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            24678899999999997541             1235666666664

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.32  E-value=0.0023  Score=54.51  Aligned_cols=93  Identities=13%  Similarity=0.018  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCC--CCcchhhhhhhh--ccCCcEEEEccCCCHHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTL--SAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~   72 (263)
                      .+||.|+|++|.+|+.++..|+..|.       ++++++.+...  ..-...+.....  ...++.+     .  ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCcHH
Confidence            57999999999999999999998873       69998886321  111111111100  0011111     1  12246


Q ss_pred             HhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHhC
Q 044721           73 AIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEAG  103 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~  103 (263)
                      .++++|+||.+||...-             ...+.+.+.+.+..
T Consensus        75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~  118 (322)
T cd01338          75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVA  118 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            78899999999998641             12356666676665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.32  E-value=0.0045  Score=48.99  Aligned_cols=95  Identities=14%  Similarity=0.195  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcC---CCCCCc----------chhhh----hhhhccC--CcEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRE---STLSAP----------SKSQL----LDHFKKL--GVNLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~----------~~~~~----~~~~~~~--~~~~~~~   62 (263)
                      ..++|+|.|+ |++|+.++..|++.|. ++++.+++   .++...          .|.+.    +..+ .+  ++..+..
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~i-np~~~i~~~~~   97 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEI-NPYTEIEAYDE   97 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEeee
Confidence            3578999996 9999999999999997 69998887   322111          11111    1111 12  3444555


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHh
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      +++ .+.+.++++++|+||.+.  ........+.+.+...
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a~--Dn~~~k~~l~~~~~~~  134 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEAF--DNAEAKAMLVNAVLEK  134 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEECC--CCHHHHHHHHHHHHHH
Confidence            554 566788899999999983  3333334555665554

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.31  E-value=0.0011  Score=50.86  Aligned_cols=57  Identities=23%  Similarity=0.353  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|+++.+|..+++.|.++|++|+++.|+.                             +++.+.++++|+||.
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~aDiVIs   93 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQADIVIV   93 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhCCEEEE
Confidence            578999999855679999999999999988888761                             245567888999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      +.+..+
T Consensus        94 at~~~~   99 (168)
T cd01080          94 AVGKPG   99 (168)
T ss_pred             cCCCCc
Confidence            988764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.31  E-value=0.0016  Score=56.61  Aligned_cols=74  Identities=20%  Similarity=0.227  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ..+++|+|+ |.+|+..++.|.+.|.+|++++|+     +++.+.+.....   ..+..+..+.+.+.+.++++|+||++
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~-----~~~~~~l~~~~g---~~v~~~~~~~~~l~~~l~~aDvVI~a  237 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDIN-----IDRLRQLDAEFG---GRIHTRYSNAYEIEDAVKRADLLIGA  237 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHHhcC---ceeEeccCCHHHHHHHHccCCEEEEc
Confidence            457999986 999999999999999999999988     444332222111   12334566788888999999999999


Q ss_pred             CCC
Q 044721           84 VGH   86 (263)
Q Consensus        84 a~~   86 (263)
                      ++.
T Consensus       238 ~~~  240 (370)
T TIGR00518       238 VLI  240 (370)
T ss_pred             ccc
Confidence            854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.31  E-value=0.0033  Score=50.20  Aligned_cols=102  Identities=16%  Similarity=0.179  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC---CCCC----------cchhhh----hhhhccCC--cEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES---TLSA----------PSKSQL----LDHFKKLG--VNLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~----------~~~~~~----~~~~~~~~--~~~~~~   62 (263)
                      ...+|+|.|+ |++|+.+++.|+..|. ++++++.+.   ++..          ..|.+.    ++.+ .+.  ++.+..
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l-np~v~v~~~~~  104 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEI-NPFVEIEAHNE  104 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHH-CCCCEEEEEee
Confidence            3568999995 9999999999999996 588888772   1111          112221    1111 233  344444


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHh-CCcceeee
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEA-GNIKRFFP  110 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~-~~~~~~i~  110 (263)
                      .++ .+.+.+.++++|+||.+.-.  ......+.+.+.+. + ++.+.-
T Consensus       105 ~i~-~~~~~~~~~~~DvVI~a~D~--~~~r~~l~~~~~~~~~-~p~I~~  149 (212)
T PRK08644        105 KID-EDNIEELFKDCDIVVEAFDN--AETKAMLVETVLEHPG-KKLVAA  149 (212)
T ss_pred             ecC-HHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHHhCC-CCEEEe
Confidence            554 35667889999999998543  33445667778877 7 666654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.30  E-value=0.0011  Score=55.83  Aligned_cols=70  Identities=17%  Similarity=0.304  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|. |.+|+.++..|.+.|++|++++|+     +++.+....+   ++..+     +.+++.+.++++|+||+
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~-----~~~~~~~~~~---G~~~~-----~~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARK-----SAHLARITEM---GLSPF-----HLSELAEEVGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHc---CCeee-----cHHHHHHHhCCCCEEEE
Confidence            4689999995 899999999999999999999998     3333322222   23322     23566778889999999


Q ss_pred             cCCC
Q 044721           83 TVGH   86 (263)
Q Consensus        83 ~a~~   86 (263)
                      +++.
T Consensus       217 t~p~  220 (296)
T PRK08306        217 TIPA  220 (296)
T ss_pred             CCCh
Confidence            8754

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.29  E-value=0.0028  Score=46.75  Aligned_cols=102  Identities=18%  Similarity=0.301  Sum_probs=66.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC--------------CCcchhhhh----hhhccCC--cEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQLL----DHFKKLG--VNLVIG   62 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--------------~~~~~~~~~----~~~~~~~--~~~~~~   62 (263)
                      .++|+|.|+ |.+|+.+++.|+..|. ++++++.+.-.              ....|.+.+    ..+ .+.  +..+..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-np~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEI-NPDVEVEAIPE   79 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHH-STTSEEEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHh-cCceeeeeeec
Confidence            468999995 9999999999999997 68888865311              001122211    111 233  455556


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      ++ +.+...+.++++|+||.+...  ......+.+.+.+.+ ++.+..+
T Consensus        80 ~~-~~~~~~~~~~~~d~vi~~~d~--~~~~~~l~~~~~~~~-~p~i~~~  124 (135)
T PF00899_consen   80 KI-DEENIEELLKDYDIVIDCVDS--LAARLLLNEICREYG-IPFIDAG  124 (135)
T ss_dssp             HC-SHHHHHHHHHTSSEEEEESSS--HHHHHHHHHHHHHTT--EEEEEE
T ss_pred             cc-ccccccccccCCCEEEEecCC--HHHHHHHHHHHHHcC-CCEEEEE
Confidence            66 556778888999999998765  344456777888888 7655443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.28  E-value=0.0011  Score=56.04  Aligned_cols=95  Identities=20%  Similarity=0.261  Sum_probs=58.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhc---cCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK---KLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++|.|.|+ |++|+.++..|+..|  +++++++|+....... ...+.+..   ........   .+.    +.++++|+
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~-a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDI   71 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGE-ALDLEDALAFLPSPVKIKA---GDY----SDCKDADI   71 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHh-HhhHHHHhhccCCCeEEEc---CCH----HHhCCCCE
Confidence            47999995 999999999999999  5799999985432111 11111110   11122221   222    24679999


Q ss_pred             EEEcCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           80 VISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        80 vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +|+++|...             ....+.+.+.+.+.+ .+-++
T Consensus        72 VIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~v  113 (306)
T cd05291          72 VVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIF  113 (306)
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence            999999864             112356667777776 54443

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.27  E-value=0.0037  Score=53.72  Aligned_cols=85  Identities=15%  Similarity=0.272  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC---EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +.++|.|.||||++|+.+++.|.+++|.   +..+....+   ..+.  ..   ..+......++. +    +.++++|+
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs---aGk~--~~---~~~~~~~v~~~~-~----~~~~~~D~   72 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS---AGKK--VT---FEGRDYTVEELT-E----DSFDGVDI   72 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC---CCCe--ee---ecCceeEEEeCC-H----HHHcCCCE
Confidence            3578999999999999999999998874   333322211   1110  00   011223333332 2    23578999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhC
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +|.+++..   ....+.+.+.+.|
T Consensus        73 vf~a~p~~---~s~~~~~~~~~~g   93 (344)
T PLN02383         73 ALFSAGGS---ISKKFGPIAVDKG   93 (344)
T ss_pred             EEECCCcH---HHHHHHHHHHhCC
Confidence            99998764   4455666666666

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.25  E-value=0.0013  Score=52.09  Aligned_cols=70  Identities=14%  Similarity=0.106  Sum_probs=47.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~v   80 (263)
                      +++|+++|+|. |.+|+++++.|.+.|++|++.+++     +++.+.+....  +...+  |.      ++++. .+|++
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~-----~~~~~~~~~~~--g~~~v--~~------~~l~~~~~Dv~   89 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADIN-----EEAVARAAELF--GATVV--AP------EEIYSVDADVF   89 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHc--CCEEE--cc------hhhccccCCEE
Confidence            35789999996 899999999999999999988887     43333222110  22222  22      22332 79999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      +.+|...
T Consensus        90 vp~A~~~   96 (200)
T cd01075          90 APCALGG   96 (200)
T ss_pred             Eeccccc
Confidence            9887643

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.24  E-value=0.0013  Score=57.84  Aligned_cols=74  Identities=20%  Similarity=0.290  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++++|.|+ |++|+.+++.|.+.|. +++++.|+     .++.+.+....+ ...     ....+++.+.+..+|+||
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt-----~~ra~~La~~~~-~~~-----~~~~~~l~~~l~~aDiVI  247 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRT-----IEKAQKITSAFR-NAS-----AHYLSELPQLIKKADIII  247 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHhc-CCe-----EecHHHHHHHhccCCEEE
Confidence            4689999995 9999999999999995 68988898     444433222111 111     223356677888999999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      ++.+..+
T Consensus       248 ~aT~a~~  254 (414)
T PRK13940        248 AAVNVLE  254 (414)
T ss_pred             ECcCCCC
Confidence            9998876

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.23  E-value=0.018  Score=43.30  Aligned_cols=37  Identities=19%  Similarity=0.228  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+..+++|.||-|-+|+++++.+.+++|-|.-++-..
T Consensus         1 msagrVivYGGkGALGSacv~~FkannywV~siDl~e   37 (236)
T KOG4022|consen    1 MSAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSE   37 (236)
T ss_pred             CCCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecc
Confidence            3446899999999999999999999999988877663

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.23  E-value=0.0038  Score=48.27  Aligned_cols=98  Identities=11%  Similarity=0.104  Sum_probs=63.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC---CCCC----------cchhhh----hhhhccCC--cEEEEccCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES---TLSA----------PSKSQL----LDHFKKLG--VNLVIGDVL   65 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~----------~~~~~~----~~~~~~~~--~~~~~~D~~   65 (263)
                      +|+|.|+ |++|+.+++.|++.|. ++++.+.+.   ++..          ..|.+.    ++++ .+.  +..+...+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-np~v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-NPFVKIEAINIKID   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-CCCCEEEEEEeecC
Confidence            5889995 9999999999999997 599988874   1110          112111    1222 233  344444453


Q ss_pred             CHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHh-CCcceee
Q 044721           66 NHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEA-GNIKRFF  109 (263)
Q Consensus        66 ~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~-~~~~~~i  109 (263)
                       .+.+.+.++++|+||.+...  ......+.+.+.+. + ++.+.
T Consensus        79 -~~~~~~~l~~~DlVi~~~d~--~~~r~~i~~~~~~~~~-ip~i~  119 (174)
T cd01487          79 -ENNLEGLFGDCDIVVEAFDN--AETKAMLAESLLGNKN-KPVVC  119 (174)
T ss_pred             -hhhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHHCC-CCEEE
Confidence             35677889999999998443  33445567777776 6 66665

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.23  E-value=0.00095  Score=58.11  Aligned_cols=35  Identities=17%  Similarity=0.456  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      .+++|.|.||.|.+|..+++.|.+.|++|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            35789999999999999999999999999999986

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.22  E-value=0.0026  Score=53.83  Aligned_cols=97  Identities=22%  Similarity=0.205  Sum_probs=60.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ||.|+|++|.+|+.++..|+..+.  +++++++++.  .-+... +++.. ....+....  +.+++.+.++++|++|.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~D-L~~~~-~~~~i~~~~--~~~~~~~~~~daDivvit   74 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAAD-LSHIP-TAASVKGFS--GEEGLENALKGADVVVIP   74 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEch-hhcCC-cCceEEEec--CCCchHHHcCCCCEEEEe
Confidence            589999999999999999998874  6888888751  111111 11111 111221101  112355789999999999


Q ss_pred             CCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           84 VGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        84 a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ||...             ....+.+.+.+.+.+ .+-++
T Consensus        75 aG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~ii  112 (312)
T TIGR01772        75 AGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMI  112 (312)
T ss_pred             CCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEE
Confidence            99864             122355666666665 55444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.21  E-value=0.0016  Score=54.40  Aligned_cols=78  Identities=22%  Similarity=0.159  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++++++|.|+ |+.|++++..|.+.|. +|+++.|+     .++.+.+.+..........  +...+++...+.++|+||
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt-----~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVI  195 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRN-----PDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLV  195 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCC-----HHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEE
Confidence            4678999995 9999999999999996 69999998     4444433221111111111  212233445567899999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      |+.+...
T Consensus       196 naTp~g~  202 (282)
T TIGR01809       196 STVPADV  202 (282)
T ss_pred             ECCCCCC
Confidence            9987653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.20  E-value=0.0014  Score=54.72  Aligned_cols=56  Identities=18%  Similarity=0.369  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|++|.+|+.++..|+++|++|+++.|+.                             .++.+.++++|+||+
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------------~~L~~~~~~aDIvI~  208 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------------QNLPELVKQADIIVG  208 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------------hhHHHHhccCCEEEE
Confidence            578999999988899999999999999888877641                             123445578999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.|..
T Consensus       209 AtG~~  213 (283)
T PRK14192        209 AVGKP  213 (283)
T ss_pred             ccCCC
Confidence            99754

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.19  E-value=0.0077  Score=47.59  Aligned_cols=106  Identities=20%  Similarity=0.298  Sum_probs=68.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---CC-------------cchhh----hhhhhccCCc--EEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---SA-------------PSKSQ----LLDHFKKLGV--NLV   60 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~-------------~~~~~----~~~~~~~~~~--~~~   60 (263)
                      ..+|+|.|. |++|+.+++.|+..|. ++++++.+.-.   ..             ..|.+    .++.+ .+.+  +.+
T Consensus        19 ~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~~   96 (198)
T cd01485          19 SAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSIV   96 (198)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEEE
Confidence            468999996 6699999999999995 68888766321   00             01111    11222 2333  444


Q ss_pred             EccCCC-HHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecccc
Q 044721           61 IGDVLN-HESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFG  114 (263)
Q Consensus        61 ~~D~~~-~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g  114 (263)
                      ..++.+ .+...+.++++|+||.+...  ......+-+.+.+.+ ++.+..+++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~--~~~~~~ln~~c~~~~-ip~i~~~~~G  148 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEEN--YERTAKVNDVCRKHH-IPFISCATYG  148 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEEeec
Confidence            445542 45567788999999988554  344456677888888 8877754433

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.19  E-value=0.007  Score=54.70  Aligned_cols=82  Identities=10%  Similarity=0.149  Sum_probs=56.6

Q ss_pred             CCeEEEEcC-CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc------cCCcEEEEccCCCHHHHHHHhc-
Q 044721            4 KSKILFIGG-TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK------KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         4 ~~~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      .+.++|||| -|.||.+++..|++.|++|+++..+-+   .+..+..+.+-      +....++.++..+..+++.+++ 
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s---~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLS---EERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEccccc---HHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            468999998 478999999999999999999876532   23333333221      2235667788777666666654 


Q ss_pred             --------------------CcCEEEEcCCCcc
Q 044721           76 --------------------QVDVVISTVGHTL   88 (263)
Q Consensus        76 --------------------~~d~vv~~a~~~~   88 (263)
                                          ..|.+|-.|++..
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v  505 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV  505 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCc
Confidence                                1477787777654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.16  E-value=0.0039  Score=53.10  Aligned_cols=92  Identities=14%  Similarity=0.069  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCC--CCcchhhhhhhhc---cCCcEEEEccCCCHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTL--SAPSKSQLLDHFK---KLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~   71 (263)
                      +.||.|+|++|.+|+.++..|+..|.       ++++++++...  ..-..... .+..   ..+..+     .  ..-.
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl-~~~~~~~~~~~~i-----~--~~~~   74 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMEL-EDCAFPLLAGVVA-----T--TDPE   74 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHH-hhccccccCCcEE-----e--cChH
Confidence            56899999999999999999998873       68888886421  11111111 1110   011111     1  1234


Q ss_pred             HHhcCcCEEEEcCCCcc-------------chhHHHHHHHHHHhC
Q 044721           72 KAIKQVDVVISTVGHTL-------------LGDQVKIIAAIKEAG  103 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~  103 (263)
                      +.++++|+||.+||...             ....+.+.+.+.+..
T Consensus        75 ~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  119 (323)
T TIGR01759        75 EAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA  119 (323)
T ss_pred             HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            67889999999999864             122356677777776

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.15  E-value=0.0045  Score=57.38  Aligned_cols=88  Identities=23%  Similarity=0.336  Sum_probs=69.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      .+++|.| .|.+|+.+++.|.++|+++++++++     +++.+.++   ..+..++.+|.++++.++++ ++++|.+|.+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v~~~~---~~g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERD-----ISAVNLMR---KYGYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECC-----HHHHHHHH---hCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            4788888 5999999999999999999999998     55544333   34678999999999999875 6789999888


Q ss_pred             CCCccchhHHHHHHHHHHhC
Q 044721           84 VGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~  103 (263)
                      .+..  ..+..++..+++..
T Consensus       472 ~~d~--~~n~~i~~~~r~~~  489 (601)
T PRK03659        472 CNEP--EDTMKIVELCQQHF  489 (601)
T ss_pred             eCCH--HHHHHHHHHHHHHC
Confidence            7654  34455666777665

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.14  E-value=0.0013  Score=55.74  Aligned_cols=33  Identities=24%  Similarity=0.404  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|.|+| .|.+|+.++..|++.|++|++.+|++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            5899999 69999999999999999999999984

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.14  E-value=0.0017  Score=54.19  Aligned_cols=77  Identities=21%  Similarity=0.287  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++++++|.|+ |+.|++++..|++.|. +++++.|+     .++.+.+ +.+.. .....+.  ..+..++.+.+..+|+
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~-----~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~di  197 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADG  197 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCE
Confidence            3578999995 9999999999999996 68899998     4444432 22211 0111111  1222233344567999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      |||+.+..
T Consensus       198 vINaTp~G  205 (283)
T PRK14027        198 VVNATPMG  205 (283)
T ss_pred             EEEcCCCC
Confidence            99997654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.14  E-value=0.0049  Score=56.72  Aligned_cols=88  Identities=23%  Similarity=0.379  Sum_probs=65.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      .+++|.| .|.+|+++++.|.++|++|++++.+     +++.+.++   +.+..++.+|.+|++.++++ ++++|.++-+
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d-----~~~~~~~~---~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETS-----RTRVDELR---ERGIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHH---HCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            3688888 5999999999999999999999988     54444333   35789999999999998864 5688988776


Q ss_pred             CCCccchhHHHHHHHHHHhC
Q 044721           84 VGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~  103 (263)
                      .+..  ....+++..+.+..
T Consensus       489 ~~~~--~~~~~iv~~~~~~~  506 (558)
T PRK10669        489 IPNG--YEAGEIVASAREKR  506 (558)
T ss_pred             cCCh--HHHHHHHHHHHHHC
Confidence            6543  22334555555443

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.13  E-value=0.0011  Score=55.38  Aligned_cols=73  Identities=16%  Similarity=0.271  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhcc--CCcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKK--LGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      .+++++|.|+ |+.|++++..|++.|. +|++++|+     .++.+.+ +.+..  +...+.  .+   +++.+.+.++|
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~-----~~ka~~la~~l~~~~~~~~~~--~~---~~~~~~~~~aD  194 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVD-----PARAAALADELNARFPAARAT--AG---SDLAAALAAAD  194 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHHHhhCCCeEEE--ec---cchHhhhCCCC
Confidence            3578999995 9999999999999997 79999998     4444422 22211  112221  11   23345667899


Q ss_pred             EEEEcCCC
Q 044721           79 VVISTVGH   86 (263)
Q Consensus        79 ~vv~~a~~   86 (263)
                      +|||+...
T Consensus       195 iVInaTp~  202 (284)
T PRK12549        195 GLVHATPT  202 (284)
T ss_pred             EEEECCcC
Confidence            99999543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.13  E-value=0.0049  Score=49.87  Aligned_cols=102  Identities=16%  Similarity=0.154  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC--------------CCcchhhh----hhhhccC--CcEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQL----LDHFKKL--GVNLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--------------~~~~~~~~----~~~~~~~--~~~~~~   61 (263)
                      ..++|+|.| .|++|+.+++.|+..|. ++++++.+.-.              ....|.+.    +..+ .+  ++..+.
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~i~~~~   97 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI-NPDVEIEAYN   97 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh-CCCCEEEEec
Confidence            357899999 59999999999999995 67777654210              00112221    1111 22  244444


Q ss_pred             ccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           62 GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        62 ~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .++ +.+.+.+.++++|+||.+....  .....+-+.+.+.+ ++.+..
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~-ip~i~~  142 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDNF--ATRYLINDACVKLG-KPLVSG  142 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEE
Confidence            455 3566778889999999997754  34455667778887 776654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=97.11  E-value=0.0022  Score=54.70  Aligned_cols=98  Identities=20%  Similarity=0.298  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHH-HHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHE-SLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-~~~~~~~~~d~   79 (263)
                      ++++||+.| +|++.+.++..|++++ .+|++.+|..     ...+   ++ .+.++..+..|+.+++ .+++..+..|.
T Consensus         1 ~~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~-----~~~~---~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~   71 (445)
T KOG0172|consen    1 TKKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTL-----KDAE---ALVKGINIKAVSLDVADEELALRKEVKPLDL   71 (445)
T ss_pred             CCcceEEec-CccccchHHHHHhhcCCceEEEehhhH-----HHHH---HHhcCCCccceEEEccchHHHHHhhhcccce
Confidence            357899999 6999999999999886 5788888772     2222   22 2456889999999988 89999999999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeecccc
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFG  114 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g  114 (263)
                      ++.+.....   +..+.+.+...  .++.+.|+|-
T Consensus        72 viSLlP~t~---h~lVaK~~i~~--~~~~vtsSyv  101 (445)
T KOG0172|consen   72 VISLLPYTF---HPLVAKGCIIT--KEDSVTSSYV  101 (445)
T ss_pred             eeeeccchh---hHHHHHHHHHh--hccccccccc
Confidence            999987652   22334444443  3555544443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.09  E-value=0.0012  Score=51.35  Aligned_cols=68  Identities=24%  Similarity=0.247  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+++++.|..-|.+|++.+|..     ........   ..+        ...+++++++++|+|+.
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~-----~~~~~~~~---~~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP-----KPEEGADE---FGV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC-----HHHHHHHH---TTE--------EESSHHHHHHH-SEEEE
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC-----Chhhhccc---ccc--------eeeehhhhcchhhhhhh
Confidence            478999999 69999999999999999999999984     22110011   111        12355677888999988


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus        98 ~~plt  102 (178)
T PF02826_consen   98 HLPLT  102 (178)
T ss_dssp             -SSSS
T ss_pred             hhccc
Confidence            88755

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.09  E-value=0.0023  Score=54.69  Aligned_cols=91  Identities=19%  Similarity=0.243  Sum_probs=55.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |++.++|.|.||||++|+.+++.|.++.|   ++..+..+.+.  -.+.   . +....+ .++ |+. +    ..|+++
T Consensus         1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa--G~~~---~-~~~~~~-~v~-~~~-~----~~~~~~   67 (336)
T PRK08040          1 MSEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESA--GETL---R-FGGKSV-TVQ-DAA-E----FDWSQA   67 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC--CceE---E-ECCcce-EEE-eCc-h----hhccCC
Confidence            77788999999999999999999998543   45555433111  0011   1 111111 111 221 1    234689


Q ss_pred             CEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           78 DVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        78 d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |++|.+++..   ....+.+.+.+.| + .+|
T Consensus        68 Dvvf~a~p~~---~s~~~~~~~~~~g-~-~VI   94 (336)
T PRK08040         68 QLAFFVAGRE---ASAAYAEEATNAG-C-LVI   94 (336)
T ss_pred             CEEEECCCHH---HHHHHHHHHHHCC-C-EEE
Confidence            9999998754   4556777776776 4 344

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.06  E-value=0.0023  Score=52.94  Aligned_cols=98  Identities=17%  Similarity=0.056  Sum_probs=60.8

Q ss_pred             EEEEcCCChhHHHHHHHHHHCC----CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            7 ILFIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      |.|+||+|.+|..++..|+..|    .++++++++...... ....+++.....   ....+.-.+++.+.++++|+||.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~-~~~dl~~~~~~~---~~~~i~~~~d~~~~~~~aDiVv~   76 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG-VAMDLQDAVEPL---ADIKVSITDDPYEAFKDADVVII   76 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH-HHHHHHHhhhhc---cCcEEEECCchHHHhCCCCEEEE
Confidence            5799998999999999999988    689999988543211 111122221111   11122222335677899999999


Q ss_pred             cCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++....             ...+.+++.+.+.. .+-++
T Consensus        77 t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~  115 (263)
T cd00650          77 TAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWI  115 (263)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEE
Confidence            9987541             22356666676665 44433

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.06  E-value=0.005  Score=53.69  Aligned_cols=104  Identities=16%  Similarity=0.191  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCC---C-----------CCcchhhhh-hhhc--cCCc--EEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVREST---L-----------SAPSKSQLL-DHFK--KLGV--NLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~-----------~~~~~~~~~-~~~~--~~~~--~~~~~   62 (263)
                      +.++|+|.|+ |++|+.+++.|+..|. ++++++++.-   +           ....|.+.+ +.+.  .+.+  ..+..
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            3568999985 9999999999999996 6888887621   0           001222211 1121  2333  33433


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      .+ +.+.+.++++++|+||++.....  ....+-+.+.+.+ ++.+..+
T Consensus       213 ~~-~~~~~~~~~~~~D~Vv~~~d~~~--~r~~ln~~~~~~~-ip~i~~~  257 (376)
T PRK08762        213 RV-TSDNVEALLQDVDVVVDGADNFP--TRYLLNDACVKLG-KPLVYGA  257 (376)
T ss_pred             cC-ChHHHHHHHhCCCEEEECCCCHH--HHHHHHHHHHHcC-CCEEEEE
Confidence            44 34567778899999999987542  3334567788888 7776643

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.04  E-value=0.0024  Score=51.71  Aligned_cols=114  Identities=38%  Similarity=0.548  Sum_probs=87.8

Q ss_pred             HHHHcCCCEEEEeccCchhHHHHhcccceEEEecC---cccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          139 AVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVG---HTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       139 ~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                      .++..|..++.+.+.+..++...+.+.+.++..++   ......+..++.++.++| +.++++.+|+......+.-.|..
T Consensus        39 ~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~  117 (233)
T PF05368_consen   39 QLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEI  117 (233)
T ss_dssp             HHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHH
T ss_pred             hhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccc
Confidence            34556777777777788899999999999998888   556777788888888888 99999999988775554444444


Q ss_pred             cchhcHHHHHHHHHHcCCCeeEEecccccccccCCCCC
Q 044721          216 SAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQ  253 (263)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (263)
                      ..+..+..+..+++..+++|+++..+.|+++++..+..
T Consensus       118 ~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~  155 (233)
T PF05368_consen  118 PHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAP  155 (233)
T ss_dssp             HHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHH
T ss_pred             hhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcc
Confidence            56677888899999999999999999999987764443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.04  E-value=0.0029  Score=52.59  Aligned_cols=57  Identities=19%  Similarity=0.344  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|+++.+|+.++..|.++|++|+++.++.                             .++.+.++++|+||.
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~ADIVIs  207 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKDADVIVS  207 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhhCCEEEE
Confidence            579999999999999999999999999999877651                             235667889999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      ..|..+
T Consensus       208 Avg~p~  213 (286)
T PRK14175        208 AVGKPG  213 (286)
T ss_pred             CCCCCc
Confidence            998764

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.02  E-value=0.0046  Score=42.56  Aligned_cols=72  Identities=29%  Similarity=0.427  Sum_probs=46.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---CCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG---HPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ||.|.| +|.+|+++++.|++.|   ++|.+. .|+     +++.+.+...  -.+.+...      +..++++..|++|
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~-----~~~~~~~~~~--~~~~~~~~------~~~~~~~~advvi   66 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRS-----PEKAAELAKE--YGVQATAD------DNEEAAQEADVVI   66 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESS-----HHHHHHHHHH--CTTEEESE------EHHHHHHHTSEEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCc-----HHHHHHHHHh--hccccccC------ChHHhhccCCEEE
Confidence            577886 7999999999999999   899955 788     5555433221  12222221      2244566799999


Q ss_pred             EcCCCccchh
Q 044721           82 STVGHTLLGD   91 (263)
Q Consensus        82 ~~a~~~~~~~   91 (263)
                      .+..+.....
T Consensus        67 lav~p~~~~~   76 (96)
T PF03807_consen   67 LAVKPQQLPE   76 (96)
T ss_dssp             E-S-GGGHHH
T ss_pred             EEECHHHHHH
Confidence            9988765433

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.01  E-value=0.011  Score=49.70  Aligned_cols=97  Identities=19%  Similarity=0.169  Sum_probs=58.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccC-CcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKL-GVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +||.|+|+ |+||+.++..|+.++  .++++++++.....-...+........ .-..+.+| .+    .+.+++.|+++
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            58999999 999999999998876  379999998432211111111110000 01122222 12    45678999999


Q ss_pred             EcCCCccc-------------hhHHHHHHHHHHhCCccee
Q 044721           82 STVGHTLL-------------GDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        82 ~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~  108 (263)
                      -.||...-             .....+.+.+.+.+ .+-+
T Consensus        75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~i  113 (313)
T COG0039          75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAI  113 (313)
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeE
Confidence            99998751             12345566666666 4433

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.01  E-value=0.002  Score=53.60  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCc-EEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGV-NLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +++++|.|| |+.+++++..|++.|. +++++.|+     .++.+.+.+...... .....++.+.+..+    ..|+||
T Consensus       126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt-----~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliI  195 (283)
T COG0169         126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRT-----RERAEELADLFGELGAAVEAAALADLEGLE----EADLLI  195 (283)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhhhccccccccccccccccc----ccCEEE
Confidence            578999995 9999999999999994 79999999     555543333222211 11112222222221    689999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      |+.+..
T Consensus       196 NaTp~G  201 (283)
T COG0169         196 NATPVG  201 (283)
T ss_pred             ECCCCC
Confidence            997655

>PRK06849 hypothetical protein; Provisional

Probab=97.00  E-value=0.0031  Score=55.27  Aligned_cols=38  Identities=18%  Similarity=0.207  Sum_probs=35.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |.++|+|||||++..+|..+++.|.+.|++|++++.++
T Consensus         1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            67789999999999999999999999999999998874

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.99  E-value=0.0018  Score=55.42  Aligned_cols=80  Identities=19%  Similarity=0.289  Sum_probs=51.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhcc-----CCcEEEEccCCCHHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKK-----LGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |..+|+|.|.| .|-+|..++..|++.|++|++.+|+     +++.+.+.....     ++... ...+.-.++..++++
T Consensus         1 ~~~~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~-----~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~   73 (328)
T PRK14618          1 MHHGMRVAVLG-AGAWGTALAVLAASKGVPVRLWARR-----PEFAAALAAERENREYLPGVAL-PAELYPTADPEEALA   73 (328)
T ss_pred             CCCCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHc
Confidence            56678999998 5999999999999999999999998     333332222100     01000 000111123445567


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      .+|+|+-+....
T Consensus        74 ~aD~Vi~~v~~~   85 (328)
T PRK14618         74 GADFAVVAVPSK   85 (328)
T ss_pred             CCCEEEEECchH
Confidence            889998887765

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.98  E-value=0.0057  Score=52.11  Aligned_cols=99  Identities=22%  Similarity=0.287  Sum_probs=60.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhcc-CCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKK-LGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +.++|.|+|| |.+|+.++..|+..| .++++++++.+........ +..... .+..   ..+....+.+ .++++|+|
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lD-l~~~~~~~~~~---~~i~~~~d~~-~l~~ADiV   77 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALD-LKHFSTLVGSN---INILGTNNYE-DIKDSDVV   77 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHH-HhhhccccCCC---eEEEeCCCHH-HhCCCCEE
Confidence            4579999997 999999999999988 6899999885432111111 111100 0111   1111112333 67899999


Q ss_pred             EEcCCCccc-------------hhHHHHHHHHHHhCCccee
Q 044721           81 ISTVGHTLL-------------GDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        81 v~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~  108 (263)
                      |.++|....             ...+.+++.+.+.. .+.+
T Consensus        78 Vitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~  117 (319)
T PTZ00117         78 VITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAF  117 (319)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeE
Confidence            999987541             22456777777776 5553

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.97  E-value=0.0066  Score=51.58  Aligned_cols=88  Identities=20%  Similarity=0.355  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|. |++|...++.+...|++|++++|+     ++|.+....+.   ...+. |.+|++.++..-+.+|.++.
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~-----~~K~e~a~~lG---Ad~~i-~~~~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRS-----EEKLELAKKLG---ADHVI-NSSDSDALEAVKEIADAIID  235 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCC-----hHHHHHHHHhC---CcEEE-EcCCchhhHHhHhhCcEEEE
Confidence            3678999997 599999999999999999999999     66776555552   22222 33355555555555999999


Q ss_pred             cCCCccchhHHHHHHHHHHhC
Q 044721           83 TVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +++ .  ......++.++..|
T Consensus       236 tv~-~--~~~~~~l~~l~~~G  253 (339)
T COG1064         236 TVG-P--ATLEPSLKALRRGG  253 (339)
T ss_pred             CCC-h--hhHHHHHHHHhcCC
Confidence            999 3  23334455555554

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.96  E-value=0.0052  Score=52.05  Aligned_cols=98  Identities=14%  Similarity=0.126  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      |++|.|.|+ |.+|+.++..|+..|. +|++.+++++.......+ +.+......  ....+....+. +.++++|++|.
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~d-l~~~~~~~~--~~~~i~~~~d~-~~~~~aDiVii   76 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALD-IAEAAPVEG--FDTKITGTNDY-EDIAGSDVVVI   76 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHH-HHhhhhhcC--CCcEEEeCCCH-HHHCCCCEEEE
Confidence            479999998 9999999999999875 899999974322111111 111100000  00111111122 34789999999


Q ss_pred             cCCCcc-------------chhHHHHHHHHHHhCCcce
Q 044721           83 TVGHTL-------------LGDQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        83 ~a~~~~-------------~~~~~~l~~~~~~~~~~~~  107 (263)
                      ++|...             ....+.+++.+.+.. .+.
T Consensus        77 ~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~  113 (307)
T PRK06223         77 TAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDA  113 (307)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence            988654             122345566666665 444

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.96  E-value=0.015  Score=46.20  Aligned_cols=87  Identities=20%  Similarity=0.252  Sum_probs=61.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++++|.|| |.+|..-++.|++.|++|++++.+..    ...+.+.  ...++.++..++.. +    .++++|.||-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~----~~l~~l~--~~~~i~~~~~~~~~-~----dl~~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE----SELTLLA--EQGGITWLARCFDA-D----ILEGAFLVIA   75 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC----HHHHHHH--HcCCEEEEeCCCCH-H----HhCCcEEEEE
Confidence            5789999996 99999999999999999999886532    1111111  12368888888763 2    3568888887


Q ss_pred             cCCCccchhHHHHHHHHHHhC
Q 044721           83 TVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +.+..  .....+...+.+.+
T Consensus        76 at~d~--~ln~~i~~~a~~~~   94 (205)
T TIGR01470        76 ATDDE--ELNRRVAHAARARG   94 (205)
T ss_pred             CCCCH--HHHHHHHHHHHHcC
Confidence            76653  34456777777766

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.95  E-value=0.0059  Score=51.19  Aligned_cols=82  Identities=11%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++++++|.|+ |+.+++++-.|+..|. +|+++.|+.+.  .++.+.+ +.+.. ........++.+.+.+.+.+.+.|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~--~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEF--FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccH--HHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence            4678999996 8889999999999995 79999998431  1132222 22211 1111222233333345556778999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      |||+....
T Consensus       200 vINaTp~G  207 (288)
T PRK12749        200 LTNGTKVG  207 (288)
T ss_pred             EEECCCCC
Confidence            99987654

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.95  E-value=0.0084  Score=51.83  Aligned_cols=101  Identities=14%  Similarity=0.182  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---CC-----------cchhhh----hhhhccCC--cEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---SA-----------PSKSQL----LDHFKKLG--VNLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~-----------~~~~~~----~~~~~~~~--~~~~~   61 (263)
                      +..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-.   ..           ..|.+.    +.++ .+.  ++.+.
T Consensus        27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~v~~~~  104 (355)
T PRK05597         27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL-NPDVKVTVSV  104 (355)
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH-CCCcEEEEEE
Confidence            3578999995 9999999999999995 78888876411   00           112221    1122 233  34444


Q ss_pred             ccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           62 GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        62 ~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ..++ .+...+.++++|+||.+....  .....+-++|.+.+ ++.+.
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~~--~~r~~~n~~c~~~~-ip~v~  148 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDNF--DTRHLASWAAARLG-IPHVW  148 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            4554 455667889999999998653  23334556788888 77665

>PRK08328 hypothetical protein; Provisional

Probab=96.94  E-value=0.011  Score=47.85  Aligned_cols=101  Identities=18%  Similarity=0.294  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC--------------Cc-chhhh----hhhhccCC--cEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------AP-SKSQL----LDHFKKLG--VNLV   60 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~-~~~~~----~~~~~~~~--~~~~   60 (263)
                      ...+|+|.|+ |++|+.+++.|+..|. ++++++.+.-..              .. .|.+.    ++.+ .+.  +..+
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~~  103 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIETF  103 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEEE
Confidence            3568999995 9999999999999995 688887653110              00 11111    1111 233  3344


Q ss_pred             EccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           61 IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        61 ~~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ...+ +++.+.+++++.|+||.+....  .....+-+.+.+.+ ++.+.
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~--~~r~~l~~~~~~~~-ip~i~  148 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDNF--ETRYLLDDYAHKKG-IPLVH  148 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            4445 4556778899999999987653  23344556777887 77665

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.94  E-value=0.0057  Score=49.93  Aligned_cols=94  Identities=19%  Similarity=0.281  Sum_probs=55.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC---C-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH---P-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~---~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      ||++++|.|.| +|.+|++++..|++.|.   + +++..|+.    +++.+.+...  .++...       .+.++++++
T Consensus         1 ~m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~----~~~~~~~~~~--~~~~~~-------~~~~~~~~~   66 (245)
T PRK07634          1 MLKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSN----VEKLDQLQAR--YNVSTT-------TDWKQHVTS   66 (245)
T ss_pred             CCCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCC----HHHHHHHHHH--cCcEEe-------CChHHHHhc
Confidence            88889999999 59999999999998873   3 55566542    2233222111  122211       123455678


Q ss_pred             cCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           77 VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +|+||.+.....   ...+++.+...- -+++++|.
T Consensus        67 ~DiViiavp~~~---~~~v~~~l~~~~-~~~~vis~   98 (245)
T PRK07634         67 VDTIVLAMPPSA---HEELLAELSPLL-SNQLVVTV   98 (245)
T ss_pred             CCEEEEecCHHH---HHHHHHHHHhhc-cCCEEEEE
Confidence            999999887643   344455444332 12355443

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.94  E-value=0.0053  Score=54.67  Aligned_cols=74  Identities=20%  Similarity=0.305  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      +.+++||||+|                ||..|.+|++++..+|++|+++.-...-         .  ...++.++.  +.
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---------~--~p~~v~~i~--V~  320 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL---------A--DPQGVKVIH--VE  320 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC---------C--CCCCceEEE--ec
Confidence            35789999975                7999999999999999999998744210         0  123455553  44


Q ss_pred             CHHHHHHHhc---CcCEEEEcCCCcc
Q 044721           66 NHESLVKAIK---QVDVVISTVGHTL   88 (263)
Q Consensus        66 ~~~~~~~~~~---~~d~vv~~a~~~~   88 (263)
                      ...++.+++.   ..|++|++|+...
T Consensus       321 ta~eM~~av~~~~~~Di~I~aAAVaD  346 (475)
T PRK13982        321 SARQMLAAVEAALPADIAIFAAAVAD  346 (475)
T ss_pred             CHHHHHHHHHhhCCCCEEEEeccccc
Confidence            5555544442   3799999999875

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.93  E-value=0.0049  Score=54.65  Aligned_cols=82  Identities=23%  Similarity=0.360  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+++++|.|+ |.+|+.+++.|...|+ +|+++.|+     .++.. ....+ +  .     +..+.+++.+.+.++|+|
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~-----~~ra~~la~~~-g--~-----~~~~~~~~~~~l~~aDvV  246 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRT-----LERAEELAEEF-G--G-----EAIPLDELPEALAEADIV  246 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHHHc-C--C-----cEeeHHHHHHHhccCCEE
Confidence            4689999995 9999999999999997 78888988     44433 22222 1  1     222335667778899999


Q ss_pred             EEcCCCccchhHHHHHHH
Q 044721           81 ISTVGHTLLGDQVKIIAA   98 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~   98 (263)
                      |.+.+....-.....++.
T Consensus       247 I~aT~s~~~~i~~~~l~~  264 (423)
T PRK00045        247 ISSTGAPHPIIGKGMVER  264 (423)
T ss_pred             EECCCCCCcEEcHHHHHH
Confidence            999887653333333443

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.92  E-value=0.0051  Score=52.22  Aligned_cols=74  Identities=27%  Similarity=0.433  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vv~   82 (263)
                      +.+++|+|++|.+|..+++.+.+.|.+|++++++     +++.+.+..+   +...+ .|..+ .+.+.+ +.++|.+++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~-----~~~~~~~~~~---~~~~~-~~~~~~~~~~~~-~~~~d~v~~  232 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRS-----PEKLKILKEL---GADYV-IDGSKFSEDVKK-LGGADVVIE  232 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHHHc---CCcEE-EecHHHHHHHHh-ccCCCEEEE
Confidence            5689999999999999999999999999998887     3343333322   12111 12222 122222 237999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      ++|..
T Consensus       233 ~~g~~  237 (332)
T cd08259         233 LVGSP  237 (332)
T ss_pred             CCChH
Confidence            99854

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.92  E-value=0.017  Score=47.15  Aligned_cols=104  Identities=14%  Similarity=0.151  Sum_probs=66.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC---C-----------cchhhh----hhhhccCCcE--EEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS---A-----------PSKSQL----LDHFKKLGVN--LVIG   62 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~-----------~~~~~~----~~~~~~~~~~--~~~~   62 (263)
                      ..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-..   .           ..|.+.    +..+ .+.+.  .+..
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i-np~v~i~~~~~  101 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQI-NPHIAINPINA  101 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHH-CCCcEEEEEec
Confidence            468999995 9999999999999995 688877764210   0           111111    1111 23333  3333


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccc
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEF  113 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~  113 (263)
                      .+ +.+.+.+++++.|+||.+....  .....+-+.+.+.+ ++.+.-++.
T Consensus       102 ~i-~~~~~~~~~~~~DlVvd~~D~~--~~r~~ln~~~~~~~-ip~v~~~~~  148 (240)
T TIGR02355       102 KL-DDAELAALIAEHDIVVDCTDNV--EVRNQLNRQCFAAK-VPLVSGAAI  148 (240)
T ss_pred             cC-CHHHHHHHhhcCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEEEec
Confidence            33 4456778899999999988654  33445667788888 777764433

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.91  E-value=0.0043  Score=52.64  Aligned_cols=73  Identities=23%  Similarity=0.378  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+++|+|.|+ |.+|+.+++.|.+.| .+|++++|+     +++.+ ....+ +  ...     .+.+++.+.+.++|+|
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~-----~~ra~~la~~~-g--~~~-----~~~~~~~~~l~~aDvV  242 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRT-----YERAEELAKEL-G--GNA-----VPLDELLELLNEADVV  242 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHc-C--CeE-----EeHHHHHHHHhcCCEE
Confidence            4789999996 999999999999876 578889988     44432 22222 1  122     2334567778899999


Q ss_pred             EEcCCCccc
Q 044721           81 ISTVGHTLL   89 (263)
Q Consensus        81 v~~a~~~~~   89 (263)
                      |.+.+....
T Consensus       243 i~at~~~~~  251 (311)
T cd05213         243 ISATGAPHY  251 (311)
T ss_pred             EECCCCCch
Confidence            999997754

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.91  E-value=0.0029  Score=57.58  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++++++|+|+ |++|++++..|++.|++|+++.|+
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~  411 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRT  411 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC
Confidence            3578999997 899999999999999999999887

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.91  E-value=0.0049  Score=52.66  Aligned_cols=75  Identities=24%  Similarity=0.376  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--CcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--QVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d   78 (263)
                      +.++||+||+|++|+..++.+.+.|+.++++..+     +++.+.+..+   +... ..|+.+.   +.+.++..  ++|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s-----~~k~~~~~~l---GAd~-vi~y~~~~~~~~v~~~t~g~gvD  213 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-----SEKLELLKEL---GADH-VINYREEDFVEQVRELTGGKGVD  213 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-----HHHHHHHHhc---CCCE-EEcCCcccHHHHHHHHcCCCCce
Confidence            5789999999999999999999999877776666     3333333333   2221 1234442   33444443  699


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +++...|..
T Consensus       214 vv~D~vG~~  222 (326)
T COG0604         214 VVLDTVGGD  222 (326)
T ss_pred             EEEECCCHH
Confidence            999999864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.90  E-value=0.0056  Score=54.14  Aligned_cols=83  Identities=20%  Similarity=0.317  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+++++|.|+ |.+|+.+++.|.+.| .+|++++|+     .++.+ ....+ +  ...+     +.+++.+.+.++|+|
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs-----~~ra~~la~~~-g--~~~i-----~~~~l~~~l~~aDvV  244 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRT-----YERAEDLAKEL-G--GEAV-----KFEDLEEYLAEADIV  244 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHc-C--CeEe-----eHHHHHHHHhhCCEE
Confidence            4679999996 999999999999999 689999998     44432 22222 1  1222     234667788899999


Q ss_pred             EEcCCCccchhHHHHHHHH
Q 044721           81 ISTVGHTLLGDQVKIIAAI   99 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~   99 (263)
                      |.+.+....-.....++.+
T Consensus       245 i~aT~s~~~ii~~e~l~~~  263 (417)
T TIGR01035       245 ISSTGAPHPIVSKEDVERA  263 (417)
T ss_pred             EECCCCCCceEcHHHHHHH
Confidence            9998766533333444444

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.90  E-value=0.021  Score=46.68  Aligned_cols=101  Identities=14%  Similarity=0.125  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---CC-----------cchhhh----hhhhccCC--cEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---SA-----------PSKSQL----LDHFKKLG--VNLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~-----------~~~~~~----~~~~~~~~--~~~~~   61 (263)
                      +.++|+|.|+ |++|+.+++.|+..|. ++++++.+.-.   ..           ..|.+.    +..+ .+.  ++.+.
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l-np~v~i~~~~  108 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI-NPHIAIETIN  108 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH-CCCCEEEEEe
Confidence            3578999997 9999999999999995 78887765311   00           112211    1122 233  34444


Q ss_pred             ccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           62 GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        62 ~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ..++ ++.+.+.++++|+||.+....  .....+-+.+.+.+ ++.+.
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D~~--~~r~~ln~~~~~~~-ip~v~  152 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTDNV--ATRNQLNRACFAAK-KPLVS  152 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCCCH--HHHHHHHHHHHHhC-CEEEE
Confidence            4443 456677889999999997643  33344667778887 77654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.90  E-value=0.0054  Score=51.13  Aligned_cols=94  Identities=17%  Similarity=0.252  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..++.+.|+|+.| +|+--++.--+-|++|+++++..    .++.+..+.+   +.+.+..-..|++.++++.+-.|.++
T Consensus       180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~----~kkeea~~~L---GAd~fv~~~~d~d~~~~~~~~~dg~~  251 (360)
T KOG0023|consen  180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSS----KKKEEAIKSL---GADVFVDSTEDPDIMKAIMKTTDGGI  251 (360)
T ss_pred             CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCc----hhHHHHHHhc---CcceeEEecCCHHHHHHHHHhhcCcc
Confidence            3578999999866 99988888888899999999984    2344444444   44555433337888888777666666


Q ss_pred             EcCCCccchhHHHHHHHHHHhC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      |++..........+++.++..|
T Consensus       252 ~~v~~~a~~~~~~~~~~lk~~G  273 (360)
T KOG0023|consen  252 DTVSNLAEHALEPLLGLLKVNG  273 (360)
T ss_pred             eeeeeccccchHHHHHHhhcCC
Confidence            5554322222334455555544

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.89  E-value=0.0048  Score=53.79  Aligned_cols=68  Identities=22%  Similarity=0.347  Sum_probs=52.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.++...   ..    ..   .-..+.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~p---a~----~~---ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSP---AA----QV---ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc---hh----Hh---CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            478999996 8999999999999999999998764321   00    01   113556789999999999999998753

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.89  E-value=0.0077  Score=52.55  Aligned_cols=86  Identities=20%  Similarity=0.327  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|.|+ |-+|.-++++|.+.| .+|+++.|+     .++.+.+ +.+ +       +++...+.+...+..+|+|
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT-----~erA~~La~~~-~-------~~~~~l~el~~~l~~~DvV  242 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRT-----LERAEELAKKL-G-------AEAVALEELLEALAEADVV  242 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCC-----HHHHHHHHHHh-C-------CeeecHHHHHHhhhhCCEE
Confidence            5689999996 999999999999999 578988998     5554432 222 1       4555667788889999999


Q ss_pred             EEcCCCccchhHHHHHHHHHHh
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      |.+.+..+.--....++.+...
T Consensus       243 issTsa~~~ii~~~~ve~a~~~  264 (414)
T COG0373         243 ISSTSAPHPIITREMVERALKI  264 (414)
T ss_pred             EEecCCCccccCHHHHHHHHhc
Confidence            9998877654444555555444

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.88  E-value=0.002  Score=48.93  Aligned_cols=86  Identities=19%  Similarity=0.337  Sum_probs=52.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-----cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ||.|.|| |..|.+++..|+.+|++|++..|+     ++..+.+....     -++... ...+.-..++++++++.|+|
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~-----~~~~~~i~~~~~n~~~~~~~~l-~~~i~~t~dl~~a~~~ad~I   73 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRD-----EEQIEEINETRQNPKYLPGIKL-PENIKATTDLEEALEDADII   73 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSC-----HHHHHHHHHHTSETTTSTTSBE-ETTEEEESSHHHHHTT-SEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHhCCCCCCCCCccc-CcccccccCHHHHhCcccEE
Confidence            6899995 999999999999999999999998     43333222211     011111 11111124556788999999


Q ss_pred             EEcCCCccchhHHHHHHHHHH
Q 044721           81 ISTVGHTLLGDQVKIIAAIKE  101 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~  101 (263)
                      +.+.....   .+.+++.+..
T Consensus        74 iiavPs~~---~~~~~~~l~~   91 (157)
T PF01210_consen   74 IIAVPSQA---HREVLEQLAP   91 (157)
T ss_dssp             EE-S-GGG---HHHHHHHHTT
T ss_pred             EecccHHH---HHHHHHHHhh
Confidence            98877654   3344555444

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.86  E-value=0.023  Score=47.98  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=54.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|.|.| .|.+|..+++.|++.|++|++.+|+     +++.+.+..   .+...    ..+.+++.+.+..+|+|+.+.
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~-----~~~~~~l~~---~g~~~----~~s~~~~~~~~~~~dvIi~~v   67 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHD-----QDAVKAMKE---DRTTG----VANLRELSQRLSAPRVVWVMV   67 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH---cCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence            4799999 5999999999999999999999998     444433222   11111    234555556667789998887


Q ss_pred             CCccchhHHHHHHHHH
Q 044721           85 GHTLLGDQVKIIAAIK  100 (263)
Q Consensus        85 ~~~~~~~~~~l~~~~~  100 (263)
                      ...   ....+++.+.
T Consensus        68 p~~---~~~~v~~~l~   80 (298)
T TIGR00872        68 PHG---IVDAVLEELA   80 (298)
T ss_pred             Cch---HHHHHHHHHH
Confidence            654   2334444443

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.86  E-value=0.011  Score=50.78  Aligned_cols=98  Identities=20%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhh--h--ccCCcE-EEEccCCCHHHHHHHhcCcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDH--F--KKLGVN-LVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~--~--~~~~~~-~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ++|+|+|++|++|+.+++.|.+.. .+++.+.++.........+....  .  ...... ...-++ +++    .+.++|
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D   75 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD   75 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence            479999999999999999998876 57777744421110100000000  0  000001 011111 222    346899


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      +++.+.+..   ....+.+.+.+.| ++.+..|
T Consensus        76 vVf~a~p~~---~s~~~~~~~~~~G-~~VIDls  104 (341)
T TIGR00978        76 IVFSALPSE---VAEEVEPKLAEAG-KPVFSNA  104 (341)
T ss_pred             EEEEeCCHH---HHHHHHHHHHHCC-CEEEECC
Confidence            999988754   3445567777778 6655554

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.83  E-value=0.0068  Score=51.60  Aligned_cols=76  Identities=17%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HH-HHHHh-cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ES-LVKAI-KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~-~~~   77 (263)
                      .+.+++|+|++|.+|..+++.+...|.+|++++++     +++.+.+..+   ++.. ..|..+.   .. +.... +++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s-----~~~~~~~~~l---Ga~~-vi~~~~~~~~~~~~~~~~~~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKVAYLKKL---GFDV-AFNYKTVKSLEETLKKASPDGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEeccccccHHHHHHHhCCCCe
Confidence            35789999999999999999888899999988887     5555544443   2222 1233322   22 22222 269


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |+++.+.|..
T Consensus       209 dvv~d~~G~~  218 (325)
T TIGR02825       209 DCYFDNVGGE  218 (325)
T ss_pred             EEEEECCCHH
Confidence            9999998853

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.83  E-value=0.018  Score=45.48  Aligned_cols=103  Identities=21%  Similarity=0.252  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC--------------Ccchhhh----hhhhccCC--cEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQL----LDHFKKLG--VNLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~----~~~~~~~~--~~~~~   61 (263)
                      +.++|+|.|+ |++|+.+++.|+..|. ++++++.+.-..              .+.|.+.    ++.+ .+.  ++.+.
T Consensus        20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~~   97 (197)
T cd01492          20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVDT   97 (197)
T ss_pred             HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEEe
Confidence            3568999995 7799999999999995 688887653110              0111111    1222 233  33344


Q ss_pred             ccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           62 GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        62 ~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ..+.+  ...+.++++|+||.+...  ......+-+.+.+.+ ++.+..++
T Consensus        98 ~~~~~--~~~~~~~~~dvVi~~~~~--~~~~~~ln~~c~~~~-ip~i~~~~  143 (197)
T cd01492          98 DDISE--KPEEFFSQFDVVVATELS--RAELVKINELCRKLG-VKFYATGV  143 (197)
T ss_pred             cCccc--cHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEEe
Confidence            44442  245678899999987653  344556677888888 87766433

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.83  E-value=0.0029  Score=56.28  Aligned_cols=34  Identities=35%  Similarity=0.520  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|.||+|.+|+.+++.|.+.|++|++.+|++
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4899999999999999999999999999999983

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.83  E-value=0.032  Score=46.13  Aligned_cols=105  Identities=13%  Similarity=0.286  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCC---CC-----------cchhhhh-hhhc--cCCcEEEE-cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTL---SA-----------PSKSQLL-DHFK--KLGVNLVI-GD   63 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~---~~-----------~~~~~~~-~~~~--~~~~~~~~-~D   63 (263)
                      ...+|+|.|. |++|+.+++.|++.| .++++++.+.-.   ..           ..|.+.+ +.+.  .+.+.+.. -+
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~  107 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD  107 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence            4568999994 999999999999999 578888866311   00           0111111 1111  23333322 23


Q ss_pred             CCCHHHHHHHhc-CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           64 VLNHESLVKAIK-QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        64 ~~~~~~~~~~~~-~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      ..+++.+.+++. +.|+||.+....  .....+.+.+.+.+ ++.+...
T Consensus       108 ~i~~e~~~~ll~~~~D~VIdaiD~~--~~k~~L~~~c~~~~-ip~I~~g  153 (268)
T PRK15116        108 FITPDNVAEYMSAGFSYVIDAIDSV--RPKAALIAYCRRNK-IPLVTTG  153 (268)
T ss_pred             ccChhhHHHHhcCCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEEC
Confidence            335666777774 799999988753  34556788888888 7776543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.82  E-value=0.0051  Score=52.68  Aligned_cols=75  Identities=15%  Similarity=0.249  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCH----HHHHHHh-cC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNH----ESLVKAI-KQ   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~----~~~~~~~-~~   76 (263)
                      .+.+++|+||+|.+|..+++.+...|.+|++++++     +++.+.+.. +   ++..+ .|..+.    +.+.+.. .+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~-----~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~~i~~~~~~g  221 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS-----DEKVDLLKNKL---GFDDA-FNYKEEPDLDAALKRYFPNG  221 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHhc---CCcee-EEcCCcccHHHHHHHhCCCC
Confidence            35789999999999999999888999999988887     445544433 3   22221 233221    2233322 37


Q ss_pred             cCEEEEcCCC
Q 044721           77 VDVVISTVGH   86 (263)
Q Consensus        77 ~d~vv~~a~~   86 (263)
                      +|+++.+.|.
T Consensus       222 vd~v~d~~g~  231 (338)
T cd08295         222 IDIYFDNVGG  231 (338)
T ss_pred             cEEEEECCCH
Confidence            9999999884

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.80  E-value=0.012  Score=50.86  Aligned_cols=89  Identities=16%  Similarity=0.366  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCC---EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVK-AGHP---TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|.|.||||++|+.+.+.|++ ....   ++.++...+.   .+.   ..+.+.  .....++.++++    ++++|++
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg---~~~---~~f~g~--~~~v~~~~~~~~----~~~~Div   69 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG---GAA---PSFGGK--EGTLQDAFDIDA----LKKLDII   69 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC---Ccc---cccCCC--cceEEecCChhH----hcCCCEE
Confidence            6899999999999999995554 5565   6665443211   011   112111  122334444433    4689999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |.+++..   ....+.+.+.++| ++.++
T Consensus        70 f~a~~~~---~s~~~~~~~~~aG-~~~~V   94 (369)
T PRK06598         70 ITCQGGD---YTNEVYPKLRAAG-WQGYW   94 (369)
T ss_pred             EECCCHH---HHHHHHHHHHhCC-CCeEE
Confidence            9999754   4567777777888 76444

>PLN00203 glutamyl-tRNA reductase

Probab=96.79  E-value=0.0078  Score=54.48  Aligned_cols=88  Identities=19%  Similarity=0.294  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++|+|.|+ |.+|+.+++.|...|. +|+++.|+     .++.+.+....+ +..+.   +...+++.+.+.++|+||
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs-----~era~~La~~~~-g~~i~---~~~~~dl~~al~~aDVVI  334 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRS-----EERVAALREEFP-DVEII---YKPLDEMLACAAEADVVF  334 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCC-----HHHHHHHHHHhC-CCceE---eecHhhHHHHHhcCCEEE
Confidence            4689999997 9999999999999996 69999998     444433222111 22221   223345567788999999


Q ss_pred             EcCCCccchhHHHHHHHHH
Q 044721           82 STVGHTLLGDQVKIIAAIK  100 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~  100 (263)
                      .+.+....-.....++.+.
T Consensus       335 sAT~s~~pvI~~e~l~~~~  353 (519)
T PLN00203        335 TSTSSETPLFLKEHVEALP  353 (519)
T ss_pred             EccCCCCCeeCHHHHHHhh
Confidence            9987665433445555543

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.78  E-value=0.0087  Score=49.74  Aligned_cols=85  Identities=21%  Similarity=0.243  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC--CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA--GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |++++|.|.| .|.||+.+++.|.+.  ++++..+ +|+     +++.+......  +....   +   +++++++.++|
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~-----~~~a~~~a~~~--g~~~~---~---~~~eell~~~D   69 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRD-----PQRHADFIWGL--RRPPP---V---VPLDQLATHAD   69 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCC-----HHHHHHHHHhc--CCCcc---c---CCHHHHhcCCC
Confidence            3457899999 699999999999874  6777644 555     33322111110  10000   1   23344566788


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhC
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +|+-+++..   ....+...+.+.|
T Consensus        70 ~Vvi~tp~~---~h~e~~~~aL~aG   91 (271)
T PRK13302         70 IVVEAAPAS---VLRAIVEPVLAAG   91 (271)
T ss_pred             EEEECCCcH---HHHHHHHHHHHcC
Confidence            888887754   2344555555555

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.78  E-value=0.0073  Score=54.66  Aligned_cols=81  Identities=21%  Similarity=0.208  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh--------hcc-CCcEE-EEccCCCHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH--------FKK-LGVNL-VIGDVLNHESL   70 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~-~~~~~-~~~D~~~~~~~   70 (263)
                      |.+.|+|.|.| +|.+|+.++..|++.|++|++.++++     ++.+.+..        +.. ..... ..+.+.-.+++
T Consensus         1 ~~~i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~   74 (495)
T PRK07531          1 MTMIMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHP-----EAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASL   74 (495)
T ss_pred             CCCcCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCH-----HHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCH
Confidence            45557899998 59999999999999999999999984     33321111        000 00000 00111122345


Q ss_pred             HHHhcCcCEEEEcCCCc
Q 044721           71 VKAIKQVDVVISTVGHT   87 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~   87 (263)
                      .++++++|+|+-+....
T Consensus        75 ~ea~~~aD~Vieavpe~   91 (495)
T PRK07531         75 AEAVAGADWIQESVPER   91 (495)
T ss_pred             HHHhcCCCEEEEcCcCC
Confidence            66788999999877654

>PLN02928 oxidoreductase family protein

Probab=96.77  E-value=0.0055  Score=52.77  Aligned_cols=81  Identities=17%  Similarity=0.160  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..++++.|.| .|.||+.+++.|...|.+|++.+|+....   ..... .+....+..+........+++++++++|+|+
T Consensus       157 l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~L~ell~~aDiVv  231 (347)
T PLN02928        157 LFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSE---PEDGL-LIPNGDVDDLVDEKGGHEDIYEFAGEADIVV  231 (347)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChh---hhhhh-ccccccccccccccCcccCHHHHHhhCCEEE
Confidence            3578999999 69999999999999999999988763210   00000 0000111111111124457889999999999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.+..
T Consensus       232 l~lPlt  237 (347)
T PLN02928        232 LCCTLT  237 (347)
T ss_pred             ECCCCC
Confidence            998765

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.77  E-value=0.0095  Score=53.77  Aligned_cols=88  Identities=19%  Similarity=0.255  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|+ |++|..+++.|.++|++|++++++....   .....+.+...++.++.++-..      ....+|.||.
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~---~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~   84 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDER---HRALAAILEALGATVRLGPGPT------LPEDTDLVVT   84 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh---hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEE
Confidence            4678999996 9999999999999999999988663211   1111123334466666544322      2356899999


Q ss_pred             cCCCccchhHHHHHHHHHHhC
Q 044721           83 TVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ..|.....   .++..+.+.+
T Consensus        85 s~Gi~~~~---~~~~~a~~~g  102 (480)
T PRK01438         85 SPGWRPDA---PLLAAAADAG  102 (480)
T ss_pred             CCCcCCCC---HHHHHHHHCC
Confidence            98876422   2344445544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.77  E-value=0.015  Score=50.50  Aligned_cols=101  Identities=18%  Similarity=0.264  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCC---CCC-----------cchhhh----hhhhccCC--cEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVREST---LSA-----------PSKSQL----LDHFKKLG--VNLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~-----------~~~~~~----~~~~~~~~--~~~~~   61 (263)
                      +..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-   +..           ..|.+.    +..+ .+.  ++.+.
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~~  117 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEI-QPDIRVNALR  117 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHH-CCCCeeEEee
Confidence            3568999995 9999999999999995 7888887631   100           112111    1122 233  44455


Q ss_pred             ccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           62 GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        62 ~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ..++ ++.+.++++++|+||.+.-..  .....+-+.+.+.+ ++.+.
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~Dn~--~~r~~in~~~~~~~-iP~v~  161 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSDSF--ATKFLVADAAEITG-TPLVW  161 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            4553 556778899999999987653  33334456677777 77665

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.76  E-value=0.014  Score=54.41  Aligned_cols=88  Identities=19%  Similarity=0.398  Sum_probs=68.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH-HhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK-AIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vv~~   83 (263)
                      ++++|.| .|.+|+.+++.|.++|+++++++.+     +++.+.++   ..+..++.+|.++++.+++ -++++|.+|.+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v~~~~---~~g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        401 PRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHD-----PDHIETLR---KFGMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             CcEEEEe-cChHHHHHHHHHHhCCCCEEEEECC-----HHHHHHHH---hcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            5788888 5999999999999999999999998     55544332   3468899999999998886 45688998887


Q ss_pred             CCCccchhHHHHHHHHHHhC
Q 044721           84 VGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ....  .....+...+++..
T Consensus       472 ~~d~--~~n~~i~~~ar~~~  489 (621)
T PRK03562        472 IDDP--QTSLQLVELVKEHF  489 (621)
T ss_pred             eCCH--HHHHHHHHHHHHhC
Confidence            7543  34455666666664

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.76  E-value=0.0084  Score=50.86  Aligned_cols=75  Identities=24%  Similarity=0.291  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|...|++|++.+|....     .        +++..+    ....+++++++++|+|+.
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~-----~--------~~~~~~----~~~~~l~e~l~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKS-----W--------PGVQSF----AGREELSAFLSQTRVLIN  196 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCC-----C--------CCceee----cccccHHHHHhcCCEEEE
Confidence            568999999 6999999999999999999998876321     0        111111    134578889999999999


Q ss_pred             cCCCccchhHHHHHH
Q 044721           83 TVGHTLLGDQVKIIA   97 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~   97 (263)
                      +.+...  .++.++.
T Consensus       197 ~lPlt~--~T~~li~  209 (312)
T PRK15469        197 LLPNTP--ETVGIIN  209 (312)
T ss_pred             CCCCCH--HHHHHhH
Confidence            887663  3444443

>PRK14851 hypothetical protein; Provisional

Probab=96.75  E-value=0.013  Score=54.73  Aligned_cols=104  Identities=14%  Similarity=0.177  Sum_probs=68.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC---CCC-----------Ccchhhhh----hhhc-cCCcEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES---TLS-----------APSKSQLL----DHFK-KLGVNLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~-----------~~~~~~~~----~~~~-~~~~~~~~~   62 (263)
                      ...+|+|.| .|++|+.+++.|+..|. ++++++.+.   ++.           ...|.+.+    .++. ..+++.+..
T Consensus        42 ~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~  120 (679)
T PRK14851         42 AEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA  120 (679)
T ss_pred             hcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence            357899999 59999999999999995 677777542   110           01122211    1111 123555666


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .++ ++.+.++++++|+||.+.-.........+.+.|.+.+ ++.+.
T Consensus       121 ~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~-iP~i~  165 (679)
T PRK14851        121 GIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKG-IPVIT  165 (679)
T ss_pred             CCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCC-CCEEE
Confidence            664 5677889999999998775433444456777888888 77665

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.74  E-value=0.013  Score=52.80  Aligned_cols=76  Identities=21%  Similarity=0.291  Sum_probs=53.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC--------------H--
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN--------------H--   67 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--------------~--   67 (263)
                      +.+++|+|+ |-+|...+..+...|++|++++++     +++.+..+.+   +..++..|..+              .  
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~-----~~rle~aesl---GA~~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTR-----PEVAEQVESM---GAEFLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCeEEEeccccccccccchhhhcchhHH
Confidence            578999995 999999999999999999999998     6666655554   33333333221              1  


Q ss_pred             HHH----HHHhcCcCEEEEcCCCcc
Q 044721           68 ESL----VKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        68 ~~~----~~~~~~~d~vv~~a~~~~   88 (263)
                      +..    .+..+++|++|.+++...
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCc
Confidence            111    222357999999999754

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.73  E-value=0.0048  Score=51.62  Aligned_cols=56  Identities=23%  Similarity=0.345  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+|+|.|.|.+|.+|+.++..|+++|++|+++.|...                             ++.+..+++|+||.
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-----------------------------~l~e~~~~ADIVIs  208 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-----------------------------DAKALCRQADIVVA  208 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-----------------------------CHHHHHhcCCEEEE
Confidence            5899999999999999999999999999999866521                             34556667888888


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.|..
T Consensus       209 avg~~  213 (301)
T PRK14194        209 AVGRP  213 (301)
T ss_pred             ecCCh
Confidence            88765

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.73  E-value=0.0059  Score=46.31  Aligned_cols=58  Identities=19%  Similarity=0.371  Sum_probs=41.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..+|+++|.|.+..+|+.++..|.++|++|+++..+.                             .++++..++.|+||
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-----------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-----------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-----------------------------SSHHHHHTTSSEEE
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-----------------------------CcccceeeeccEEe
Confidence            3589999999999999999999999999999865541                             12345566788888


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      ..+|...
T Consensus        85 sa~G~~~   91 (160)
T PF02882_consen   85 SAVGKPN   91 (160)
T ss_dssp             E-SSSTT
T ss_pred             eeecccc
Confidence            8888664

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.72  E-value=0.0082  Score=51.00  Aligned_cols=75  Identities=19%  Similarity=0.278  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHh-cCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAI-KQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d   78 (263)
                      .+.+++|+||+|.+|..+++.+...|.+|++++++     +++.+.+..+   ++..+ .|..++   +.+.+.. .++|
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s-----~~~~~~l~~~---Ga~~v-i~~~~~~~~~~v~~~~~~gvd  213 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGS-----DDKVAWLKEL---GFDAV-FNYKTVSLEEALKEAAPDGID  213 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCEE-EeCCCccHHHHHHHHCCCCcE
Confidence            35789999999999999999999999999988887     5555544443   22221 233332   2233322 3689


Q ss_pred             EEEEcCCC
Q 044721           79 VVISTVGH   86 (263)
Q Consensus        79 ~vv~~a~~   86 (263)
                      +++.+.|.
T Consensus       214 ~vld~~g~  221 (329)
T cd08294         214 CYFDNVGG  221 (329)
T ss_pred             EEEECCCH
Confidence            99999885

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.71  E-value=0.0094  Score=50.56  Aligned_cols=97  Identities=14%  Similarity=0.105  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .+||.|+|+ |.+|+.++..|+..|  .++++++++.........+ +++..  .....+...  .|.    +.++++|+
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~D-l~~~~~~~~~~~v~~~--~dy----~~~~~adi   74 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMD-LQHGSAFLKNPKIEAD--KDY----SVTANSKV   74 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHH-HHHhhccCCCCEEEEC--CCH----HHhCCCCE
Confidence            469999996 999999999999887  3689999874322111111 11110  011122211  122    24789999


Q ss_pred             EEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           80 VISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        80 vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ||.+||....             ...+.+.+.+.+.+ .+-++
T Consensus        75 vvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~v  116 (312)
T cd05293          75 VIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAIL  116 (312)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEE
Confidence            9999997641             11345566666665 44443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.70  E-value=0.01  Score=50.92  Aligned_cols=74  Identities=22%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCC---HHHHHHHh-cCcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLN---HESLVKAI-KQVD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~---~~~~~~~~-~~~d   78 (263)
                      .+++|+||+|.+|..+++.+...|+ +|++++++     +++.+.+.. +   ++..+ .|..+   .+.+.++. .++|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s-----~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~i~~~~~~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGS-----DEKCQLLKSEL---GFDAA-INYKTDNVAERLRELCPEGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCC-----HHHHHHHHHhc---CCcEE-EECCCCCHHHHHHHHCCCCce
Confidence            7899999999999999998888998 79988877     444443322 3   22221 23322   22333332 3799


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +++.+.|..
T Consensus       227 ~vid~~g~~  235 (345)
T cd08293         227 VYFDNVGGE  235 (345)
T ss_pred             EEEECCCcH
Confidence            999998854

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.69  E-value=0.005  Score=55.39  Aligned_cols=71  Identities=18%  Similarity=0.299  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|+ |++|++++..|.+.|++|++.+|+     .++.+.+....  +...  .++   +++. .+.++|+||+
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~-----~~~~~~la~~~--~~~~--~~~---~~~~-~l~~~DiVIn  396 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRT-----KAHAEALASRC--QGKA--FPL---ESLP-ELHRIDIIIN  396 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh--ccce--ech---hHhc-ccCCCCEEEE
Confidence            4678999995 899999999999999999988887     33333221111  1111  122   2221 2468999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       397 atP~g  401 (477)
T PRK09310        397 CLPPS  401 (477)
T ss_pred             cCCCC
Confidence            98755

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.68  E-value=0.014  Score=49.73  Aligned_cols=80  Identities=23%  Similarity=0.232  Sum_probs=50.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhcCc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |.+.+||.|.| +|.+|+.++..|+..|. +++++++++.......+......  .+....+..  .+|   . +.++++
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~-~~l~~a   75 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---Y-EDIAGS   75 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---H-HHhCCC
Confidence            34567999999 59999999999999994 89999988543211111111111  111122221  122   2 357899


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |+||.++|..
T Consensus        76 DiVI~tag~~   85 (321)
T PTZ00082         76 DVVIVTAGLT   85 (321)
T ss_pred             CEEEECCCCC
Confidence            9999999874

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.68  E-value=0.015  Score=48.36  Aligned_cols=97  Identities=23%  Similarity=0.290  Sum_probs=64.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh----------ccCCcEEEEccCCCHHHHHHHh
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF----------KKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ++|.+.| .|-.|..++.+|++.||+|++.+|+++..    .+.+...          ......++..=+.|.+++++.+
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka----~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~   75 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKA----AELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVL   75 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhh----hHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHH
Confidence            4788888 79999999999999999999999995431    2221110          0123455666677888888776


Q ss_pred             cCcCE----------EEEcCCCccchhHHHHHHHHHHhCCccee
Q 044721           75 KQVDV----------VISTVGHTLLGDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        75 ~~~d~----------vv~~a~~~~~~~~~~l~~~~~~~~~~~~~  108 (263)
                      -+.+.          +|.+ ........+++.+.+.+.| ...+
T Consensus        76 ~g~~g~~~~~~~G~i~IDm-STisp~~a~~~a~~~~~~G-~~~l  117 (286)
T COG2084          76 FGENGLLEGLKPGAIVIDM-STISPETARELAAALAAKG-LEFL  117 (286)
T ss_pred             hCccchhhcCCCCCEEEEC-CCCCHHHHHHHHHHHHhcC-CcEE
Confidence            54322          2333 2223566788888888887 5443

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.68  E-value=0.0013  Score=55.10  Aligned_cols=35  Identities=14%  Similarity=0.188  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ..++|.|.|+ |.+|+.++..|++.|++|++.+++.
T Consensus         2 ~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (287)
T PRK08293          2 DIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISD   36 (287)
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            4578999995 9999999999999999999999984

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.67  E-value=0.0025  Score=53.44  Aligned_cols=38  Identities=24%  Similarity=0.408  Sum_probs=33.1

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCC
Q 044721            1 MAS-KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         1 m~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      |++ .++|.|.|+ |.+|+.++..|+..|++|++.+++++
T Consensus         1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~   39 (286)
T PRK07819          1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEE   39 (286)
T ss_pred             CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            444 458999996 99999999999999999999999953

>PRK14852 hypothetical protein; Provisional

Probab=96.67  E-value=0.021  Score=54.96  Aligned_cols=104  Identities=14%  Similarity=0.131  Sum_probs=69.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCC---CC-----------Ccchhhh----hhhhccCCc--EEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVREST---LS-----------APSKSQL----LDHFKKLGV--NLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~-----------~~~~~~~----~~~~~~~~~--~~~~   61 (263)
                      ...+|+|.| .|++|+.+++.|+..|. ++++++.+.-   +.           ...|.+.    +.++ .+.+  +.+.
T Consensus       331 ~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I-NP~v~I~~~~  408 (989)
T PRK14852        331 LRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV-NPFLDIRSFP  408 (989)
T ss_pred             hcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH-CCCCeEEEEe
Confidence            356899999 59999999999999995 6777765421   10           0112221    1122 3444  4444


Q ss_pred             ccCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           62 GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        62 ~D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ..+ +++.+.++++++|+||.+.-.......+.+.+.|.+.+ ++.+..
T Consensus       409 ~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~-IP~I~a  455 (989)
T PRK14852        409 EGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELG-IPVITA  455 (989)
T ss_pred             cCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcC-CCEEEe
Confidence            444 56778889999999998876554455567778888888 887764

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.67  E-value=0.0082  Score=51.09  Aligned_cols=66  Identities=20%  Similarity=0.386  Sum_probs=52.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +++|.|.|| |++|+-++.+-.+.|++|++++-++....   .    .   -.-..+..+.+|++.+.++.+++|+|
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA---~----~---va~~~i~~~~dD~~al~ela~~~DVi   66 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPA---A----Q---VADRVIVAAYDDPEALRELAAKCDVI   66 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCch---h----h---cccceeecCCCCHHHHHHHHhhCCEE
Confidence            478999996 99999999999999999999987754321   0    0   01245667888999999999999987

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.66  E-value=0.0071  Score=44.86  Aligned_cols=57  Identities=18%  Similarity=0.272  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++++|.|.+.-+|+.++..|.++|++|+++.++.                             .++++.++++|+||.
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t-----------------------------~~l~~~v~~ADIVvs   77 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT-----------------------------IQLQSKVHDADVVVV   77 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC-----------------------------cCHHHHHhhCCEEEE
Confidence            589999999999999999999999999999876552                             133456778888888


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      ..|...
T Consensus        78 Atg~~~   83 (140)
T cd05212          78 GSPKPE   83 (140)
T ss_pred             ecCCCC
Confidence            888653

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.64  E-value=0.0092  Score=46.50  Aligned_cols=78  Identities=14%  Similarity=0.141  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~v   80 (263)
                      ..+|+++|.|.|.-+|+.++..|+++|++|+++..+.-.. ..+        ............| +..+.+.+++.|+|
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~-~~~--------~~~~~hs~t~~~~~~~~l~~~~~~ADIV  130 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV-FTR--------GESIRHEKHHVTDEEAMTLDCLSQSDVV  130 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc-ccc--------ccccccccccccchhhHHHHHhhhCCEE
Confidence            3589999999999999999999999999999886553110 000        0000000111112 23467888999999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |...|...
T Consensus       131 IsAvG~~~  138 (197)
T cd01079         131 ITGVPSPN  138 (197)
T ss_pred             EEccCCCC
Confidence            99999775

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.64  E-value=0.011  Score=51.88  Aligned_cols=68  Identities=19%  Similarity=0.265  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|+ |.||+.+++.+...|.+|++++++     +.+.+....   .++..+     +   ++++++++|++|.
T Consensus       201 ~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d-----~~R~~~A~~---~G~~~~-----~---~~e~v~~aDVVI~  263 (413)
T cd00401         201 AGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVD-----PICALQAAM---EGYEVM-----T---MEEAVKEGDIFVT  263 (413)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECC-----hhhHHHHHh---cCCEEc-----c---HHHHHcCCCEEEE
Confidence            5789999995 999999999999999999998888     434332222   233222     1   2356678999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.|..
T Consensus       264 atG~~  268 (413)
T cd00401         264 TTGNK  268 (413)
T ss_pred             CCCCH
Confidence            98754

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.64  E-value=0.022  Score=50.42  Aligned_cols=92  Identities=12%  Similarity=0.035  Sum_probs=58.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-------CC--CEEEEEcCCCCCCcchhhhhhhh-c-cCCcEEEEccCCCHHHHHHH
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-------GH--PTFVLVRESTLSAPSKSQLLDHF-K-KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~   73 (263)
                      -+|.|+|++|.+|++++..|+..       |.  ++++++++.+...-...+..+.. . ..++.+...   +    .+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HHH
Confidence            47999999999999999999988       64  68888888543322222221111 0 011211111   2    456


Q ss_pred             hcCcCEEEEcCCCcc-------------chhHHHHHHHHHH-hC
Q 044721           74 IKQVDVVISTVGHTL-------------LGDQVKIIAAIKE-AG  103 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~-~~  103 (263)
                      ++++|++|.+||...             ....+.+.+.+.+ ++
T Consensus       174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~  217 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS  217 (444)
T ss_pred             hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            889999999999864             1223566677777 44

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.63  E-value=0.015  Score=49.39  Aligned_cols=97  Identities=12%  Similarity=0.140  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchh---hhhhhhccCCcE--EEEccCCCHHHHHHHhcCcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS---QLLDHFKKLGVN--LVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~~d   78 (263)
                      .++|.|.|+ |-+|+.++..|+..|++|++.++++........   ..++.+...+..  .....+.-..+++++++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            378999995 999999999999999999999998432100000   001111111100  00111222235667888999


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHh
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      .|+-+.... ....+.++..+.+.
T Consensus        86 lViEavpE~-l~vK~~lf~~l~~~  108 (321)
T PRK07066         86 FIQESAPER-EALKLELHERISRA  108 (321)
T ss_pred             EEEECCcCC-HHHHHHHHHHHHHh
Confidence            999986543 44455666555544

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.62  E-value=0.013  Score=50.36  Aligned_cols=78  Identities=29%  Similarity=0.395  Sum_probs=52.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc----cCCcE-EEE---cc--CCCHHHHHHHh
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----KLGVN-LVI---GD--VLNHESLVKAI   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~-~~~---~D--~~~~~~~~~~~   74 (263)
                      |+|.|.| +||+|.-.+--|++.||+|++++.+     +.|.+.+..-.    +++.+ .++   .+  +.-..+.++++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid-----~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~   74 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDID-----ESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV   74 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence            6899999 7999999999999999999999998     44443322211    11110 000   01  22234456778


Q ss_pred             cCcCEEEEcCCCcc
Q 044721           75 KQVDVVISTVGHTL   88 (263)
Q Consensus        75 ~~~d~vv~~a~~~~   88 (263)
                      +..|++|-+.|.+.
T Consensus        75 ~~adv~fIavgTP~   88 (414)
T COG1004          75 KDADVVFIAVGTPP   88 (414)
T ss_pred             hcCCEEEEEcCCCC
Confidence            88999999998775

>PLN02602 lactate dehydrogenase

Probab=96.62  E-value=0.038  Score=47.59  Aligned_cols=97  Identities=13%  Similarity=0.132  Sum_probs=58.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +||.|+|+ |.+|+.++..|+..+.  ++++++.+.........+...... ..... +..+ .|    .+.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~d----y~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TD----YAVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CC----HHHhCCCCEEE
Confidence            69999996 9999999999998873  699999875332111111111100 01122 2211 12    23478999999


Q ss_pred             EcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .+||....             ...+.+.+.+.+.+ .+-++
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~iv  150 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTIL  150 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEE
Confidence            99998641             12345666666665 44443

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.61  E-value=0.0058  Score=51.14  Aligned_cols=55  Identities=20%  Similarity=0.358  Sum_probs=45.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+|+|+|.|.++.+|+.++..|+++|++|+++. |+.                              +++++.+.+|+||
T Consensus       157 ~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~------------------------------~l~e~~~~ADIVI  206 (296)
T PRK14188        157 SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR------------------------------DLPAVCRRADILV  206 (296)
T ss_pred             CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC------------------------------CHHHHHhcCCEEE
Confidence            589999999999999999999999999999874 441                              1345666788888


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.|..
T Consensus       207 savg~~  212 (296)
T PRK14188        207 AAVGRP  212 (296)
T ss_pred             EecCCh
Confidence            888765

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.61  E-value=0.011  Score=49.91  Aligned_cols=94  Identities=16%  Similarity=0.279  Sum_probs=55.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcE-E--EEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVN-L--VIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~--~~~D~~~~~~~~~~~~~~d   78 (263)
                      +|+++.|.||||+.|..|.+.|+... .++...+.+..     +.+.+... .++.. .  ......|.+.+  ..+++|
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-----~g~~~~~~-~p~l~g~~~l~~~~~~~~~~--~~~~~D   72 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-----AGKPVSDV-HPNLRGLVDLPFQTIDPEKI--ELDECD   72 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-----cCCchHHh-CcccccccccccccCChhhh--hcccCC
Confidence            35799999999999999999999875 46555543321     11111111 11111 1  11122233322  455799


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|.+....   ....++....+.+ ++ +|
T Consensus        73 vvFlalPhg---~s~~~v~~l~~~g-~~-VI   98 (349)
T COG0002          73 VVFLALPHG---VSAELVPELLEAG-CK-VI   98 (349)
T ss_pred             EEEEecCch---hHHHHHHHHHhCC-Ce-EE
Confidence            999988754   3456677777776 55 54

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.59  E-value=0.01  Score=52.30  Aligned_cols=69  Identities=14%  Similarity=0.177  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +.+++++|+|. |.||+.+++.|...|.+|+++++++     .+......   .++.+.        +++++++++|++|
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp-----~ra~~A~~---~G~~v~--------~l~eal~~aDVVI  272 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDP-----ICALQAAM---DGFRVM--------TMEEAAELGDIFV  272 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCc-----hhhHHHHh---cCCEec--------CHHHHHhCCCEEE
Confidence            35789999995 9999999999999999999999884     22211111   122211        2356677999999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.|..
T Consensus       273 ~aTG~~  278 (425)
T PRK05476        273 TATGNK  278 (425)
T ss_pred             ECCCCH
Confidence            988753

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.58  E-value=0.037  Score=44.78  Aligned_cols=96  Identities=18%  Similarity=0.163  Sum_probs=72.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      +++|+|.|||+ =++.+++.|...+..+++.+-.....  +..       .+....+.+-..+.+.+.+.++  ++|.||
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~--~l~-------~~~~~~~~~G~l~~e~l~~~l~e~~i~llI   71 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGA--KLA-------EQIGPVRVGGFLGAEGLAAFLREEGIDLLI   71 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccc--cch-------hccCCeeecCcCCHHHHHHHHHHcCCCEEE
Confidence            57899999875 58999999999885555444332211  111       1223366778889999999887  799999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      -..-+.......|.+++|++.+ ++.+-+
T Consensus        72 DATHPyAa~iS~Na~~aake~g-ipy~r~   99 (257)
T COG2099          72 DATHPYAARISQNAARAAKETG-IPYLRL   99 (257)
T ss_pred             ECCChHHHHHHHHHHHHHHHhC-CcEEEE
Confidence            9988887888899999999999 888765

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.57  E-value=0.06  Score=48.35  Aligned_cols=75  Identities=21%  Similarity=0.163  Sum_probs=47.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      .+|.|.| .|..|+++++.|++.|++|++.+|+     +++.+.+... ...+.....  ..+.+++-+.++++|+|+-+
T Consensus         2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~-----~~~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~   73 (470)
T PTZ00142          2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRT-----YEKTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILL   73 (470)
T ss_pred             CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEE
Confidence            4799999 6999999999999999999999999     4444322221 111221111  22444443334468877777


Q ss_pred             CCCc
Q 044721           84 VGHT   87 (263)
Q Consensus        84 a~~~   87 (263)
                      ....
T Consensus        74 v~~~   77 (470)
T PTZ00142         74 IKAG   77 (470)
T ss_pred             eCCh
Confidence            5543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.57  E-value=0.023  Score=50.78  Aligned_cols=88  Identities=19%  Similarity=0.175  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|. |.+|.++++.|+++|++|++.+.+...   .....++.. ..++.+..+...+     ..+.+.|.||.
T Consensus         4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~---~~~~~l~~~-~~gi~~~~g~~~~-----~~~~~~d~vv~   73 (445)
T PRK04308          4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKP---ERVAQIGKM-FDGLVFYTGRLKD-----ALDNGFDILAL   73 (445)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCc---hhHHHHhhc-cCCcEEEeCCCCH-----HHHhCCCEEEE
Confidence            4689999996 799999999999999999998876432   111111111 1255555544321     13457999999


Q ss_pred             cCCCccchhHHHHHHHHHHhC
Q 044721           83 TVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ..|...-   ...+..+.+.+
T Consensus        74 spgi~~~---~p~~~~a~~~~   91 (445)
T PRK04308         74 SPGISER---QPDIEAFKQNG   91 (445)
T ss_pred             CCCCCCC---CHHHHHHHHcC
Confidence            9987631   23455555555

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.56  E-value=0.017  Score=45.78  Aligned_cols=83  Identities=14%  Similarity=0.158  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++++|.|| |.+|...++.|++.|++|+++++...    ....  +......+.+..-++.     ...+.++|.||.
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~----~~l~--~l~~~~~i~~~~~~~~-----~~~l~~adlVia   76 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELT----ENLV--KLVEEGKIRWKQKEFE-----PSDIVDAFLVIA   76 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC----HHHH--HHHhCCCEEEEecCCC-----hhhcCCceEEEE
Confidence            5789999996 99999999999999999999876521    1111  1111223444443332     224567898888


Q ss_pred             cCCCccchhHHHHHHHH
Q 044721           83 TVGHTLLGDQVKIIAAI   99 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~   99 (263)
                      +.+...  ....+.+.+
T Consensus        77 aT~d~e--lN~~i~~~a   91 (202)
T PRK06718         77 ATNDPR--VNEQVKEDL   91 (202)
T ss_pred             cCCCHH--HHHHHHHHH
Confidence            766543  334555555

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.55  E-value=0.027  Score=48.30  Aligned_cols=84  Identities=17%  Similarity=0.274  Sum_probs=51.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCC---EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVK-AGHP---TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .++|.|.||||++|+.+++.|.+ ...+   +..+....+.  -.+.    .+....+.+.  ++ |++    .++++|+
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa--Gk~~----~~~~~~l~v~--~~-~~~----~~~~~Di   71 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA--GKTV----QFKGREIIIQ--EA-KIN----SFEGVDI   71 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC--CCCe----eeCCcceEEE--eC-CHH----HhcCCCE
Confidence            46899999999999999999995 5666   5555433110  0011    1111122222  22 333    2468999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhC
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +|.+++..   ....+...+.+.|
T Consensus        72 vf~a~~~~---~s~~~~~~~~~~G   92 (347)
T PRK06728         72 AFFSAGGE---VSRQFVNQAVSSG   92 (347)
T ss_pred             EEECCChH---HHHHHHHHHHHCC
Confidence            99998754   4556677776666

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.55  E-value=0.0057  Score=52.14  Aligned_cols=87  Identities=17%  Similarity=0.359  Sum_probs=52.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-c----CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-K----LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~----~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |+|.|.|+ |.+|+.++..|++.|++|++++|+     +++.+.+.... .    .... ....+.-..+.++.++++|+
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~   74 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARD-----PEQAAEINADRENPRYLPGIK-LPDNLRATTDLAEALADADL   74 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcCcccccCCCCc-CCCCeEEeCCHHHHHhCCCE
Confidence            58999995 999999999999999999999998     33332221110 0    0000 00011112234456678999


Q ss_pred             EEEcCCCccchhHHHHHHHHHH
Q 044721           80 VISTVGHTLLGDQVKIIAAIKE  101 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~  101 (263)
                      ||-+....   ....+++.+..
T Consensus        75 vi~~v~~~---~~~~v~~~l~~   93 (325)
T PRK00094         75 ILVAVPSQ---ALREVLKQLKP   93 (325)
T ss_pred             EEEeCCHH---HHHHHHHHHHh
Confidence            99988763   33444444443

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.53  E-value=0.017  Score=43.80  Aligned_cols=82  Identities=13%  Similarity=0.176  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++++|.|| |.+|...++.|++.|++|++++..       ..+.+..+  ..+.+..-.+. ++    -+++.|.+|.
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~-------~~~~l~~l--~~i~~~~~~~~-~~----dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE-------ICKEMKEL--PYITWKQKTFS-ND----DIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc-------cCHHHHhc--cCcEEEecccC-hh----cCCCceEEEE
Confidence            5789999996 999999999999999999988432       11111222  12333332332 22    2567788887


Q ss_pred             cCCCccchhHHHHHHHHHH
Q 044721           83 TVGHTLLGDQVKIIAAIKE  101 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~  101 (263)
                      +.....  ....+...+.+
T Consensus        77 aT~d~e--~N~~i~~~a~~   93 (157)
T PRK06719         77 ATNQHA--VNMMVKQAAHD   93 (157)
T ss_pred             CCCCHH--HHHHHHHHHHH
Confidence            655432  23344444444

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.53  E-value=0.0022  Score=53.81  Aligned_cols=33  Identities=21%  Similarity=0.354  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|.|.|+ |.+|+.++..|++.|++|++.++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~   34 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQ   34 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCH
Confidence            58999996 9999999999999999999999984

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.52  E-value=0.044  Score=46.39  Aligned_cols=75  Identities=15%  Similarity=0.327  Sum_probs=48.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhh--hhcc-CCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLD--HFKK-LGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ||.|.|+ |.+|+.++..|+..+.  ++++++.+......+......  .+.. .++.+..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889997 9999999999998883  699999874432111121111  1111 123333322       3568899999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |.+||...
T Consensus        73 vitaG~~~   80 (307)
T cd05290          73 VITAGPSI   80 (307)
T ss_pred             EECCCCCC
Confidence            99999753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.52  E-value=0.003  Score=53.58  Aligned_cols=37  Identities=19%  Similarity=0.278  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |.+.++|.|.|+ |.+|+.++..|++.|++|++.+++.
T Consensus         1 ~~~~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          1 MNPIQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            555688999995 9999999999999999999999884

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.51  E-value=0.0079  Score=50.99  Aligned_cols=35  Identities=26%  Similarity=0.368  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .+|+|.|.| +|.+|++++..|.+.|++|++.+|+.
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            467899998 59999999999999999999999884

>PRK07574 formate dehydrogenase; Provisional

Probab=96.50  E-value=0.0086  Score=52.17  Aligned_cols=77  Identities=16%  Similarity=0.151  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+|++.|.| .|.||+.+++.|...|.+|+..+|....     .+....   .+       +.-..+++++++.+|+|+.
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~-----~~~~~~---~g-------~~~~~~l~ell~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLP-----EEVEQE---LG-------LTYHVSFDSLVSVCDVVTI  254 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCc-----hhhHhh---cC-------ceecCCHHHHhhcCCEEEE
Confidence            578999999 5999999999999999999998887321     110000   11       1112356788889999988


Q ss_pred             cCCCccchhHHHHHH
Q 044721           83 TVGHTLLGDQVKIIA   97 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~   97 (263)
                      +.+...  .+++++.
T Consensus       255 ~lPlt~--~T~~li~  267 (385)
T PRK07574        255 HCPLHP--ETEHLFD  267 (385)
T ss_pred             cCCCCH--HHHHHhC
Confidence            887653  3444443

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=96.50  E-value=0.036  Score=50.52  Aligned_cols=102  Identities=19%  Similarity=0.189  Sum_probs=73.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCc----chhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAP----SKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ..+|+|.| +|++|+.++..|+..|. ++++++-+......    +..+..++ ..+++.+...|.++.+++.+.|++.|
T Consensus       129 ~akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~-~n~~v~v~~i~~~~~~dl~ev~~~~D  206 (637)
T TIGR03693       129 NAKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEE-TDDALLVQEIDFAEDQHLHEAFEPAD  206 (637)
T ss_pred             cccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHH-hCCCCceEeccCCcchhHHHhhcCCc
Confidence            35899999 69999999999999995 67666544321111    11222222 24567777777788899999999999


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhCCccee
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~  108 (263)
                      +|++.+--........+-+++.+.+ ...+
T Consensus       207 iVi~vsDdy~~~~Lr~lN~acvkeg-k~~I  235 (637)
T TIGR03693       207 WVLYVSDNGDIDDLHALHAFCKEEG-KGFI  235 (637)
T ss_pred             EEEEECCCCChHHHHHHHHHHHHcC-CCeE
Confidence            9999988666566677778888887 4444

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.49  E-value=0.053  Score=43.90  Aligned_cols=106  Identities=14%  Similarity=0.204  Sum_probs=66.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---C-----------Ccchhhh----hhhhccCCc--EEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---S-----------APSKSQL----LDHFKKLGV--NLVI   61 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~-----------~~~~~~~----~~~~~~~~~--~~~~   61 (263)
                      ...+|+|.| .|++|+.+++.|++.|. ++++++.+.-.   .           ...|.+.    +..+ .+.+  +.+.
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i-nP~~~V~~~~   87 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDI-NPECEVDAVE   87 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHH-CCCcEEEEee
Confidence            357899999 59999999999999995 78887765311   0           0112221    1111 2333  3344


Q ss_pred             ccCCCHHHHHHHhc-CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecccc
Q 044721           62 GDVLNHESLVKAIK-QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFG  114 (263)
Q Consensus        62 ~D~~~~~~~~~~~~-~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g  114 (263)
                      ..++ ++.+.+++. ++|+||.+....  .....+.+.+.+.+ ++.+.....|
T Consensus        88 ~~i~-~~~~~~l~~~~~D~VvdaiD~~--~~k~~L~~~c~~~~-ip~I~s~g~g  137 (231)
T cd00755          88 EFLT-PDNSEDLLGGDPDFVVDAIDSI--RAKVALIAYCRKRK-IPVISSMGAG  137 (231)
T ss_pred             eecC-HhHHHHHhcCCCCEEEEcCCCH--HHHHHHHHHHHHhC-CCEEEEeCCc
Confidence            3443 455666664 699999987643  34566888888888 7766543333

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.48  E-value=0.015  Score=48.93  Aligned_cols=76  Identities=20%  Similarity=0.347  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~   77 (263)
                      ++++++|+|++|.+|..+++.+.+.|.+|++++++     +++.+.+..+   ++.. ..|..+.+   .+.+...  ++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~-----~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASS-----AEGAELVRQA---GADA-VFNYRAEDLADRILAATAGQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEeCCCcCHHHHHHHHcCCCce
Confidence            36789999999999999999999999999999887     4444333322   2221 23444333   3333332  69


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |.++++++..
T Consensus       215 d~vi~~~~~~  224 (325)
T cd08253         215 DVIIEVLANV  224 (325)
T ss_pred             EEEEECCchH
Confidence            9999998754

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.48  E-value=0.015  Score=48.98  Aligned_cols=78  Identities=17%  Similarity=0.254  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEE-----ccCCCHHHHHHHhcCcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI-----GDVLNHESLVKAIKQVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~d   78 (263)
                      +++|.|.|+ |-=|.+|+..|++.|++|++..|+     ++..+.+... ..+..+..     .++.-..++.++++++|
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~-----~~~~~~i~~~-~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad   73 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRD-----EEIVAEINET-RENPKYLPGILLPPNLKATTDLAEALDGAD   73 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecC-----HHHHHHHHhc-CcCccccCCccCCcccccccCHHHHHhcCC
Confidence            468999995 999999999999999999999999     4333322221 12222222     23333457788888999


Q ss_pred             EEEEcCCCcc
Q 044721           79 VVISTVGHTL   88 (263)
Q Consensus        79 ~vv~~a~~~~   88 (263)
                      .|+...+...
T Consensus        74 ~iv~avPs~~   83 (329)
T COG0240          74 IIVIAVPSQA   83 (329)
T ss_pred             EEEEECChHH
Confidence            9998877543

>PLN02494 adenosylhomocysteinase

Probab=96.47  E-value=0.021  Score=50.77  Aligned_cols=70  Identities=19%  Similarity=0.215  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..+++++|.| .|.||+.+++.+...|.+|+++.+++.     +.....   ..++.++        .+++++++.|++|
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~-----r~~eA~---~~G~~vv--------~leEal~~ADVVI  314 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPI-----CALQAL---MEGYQVL--------TLEDVVSEADIFV  314 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCch-----hhHHHH---hcCCeec--------cHHHHHhhCCEEE
Confidence            4578999999 599999999999999999999888842     211101   1122221        2455677899999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      .+.|..+
T Consensus       315 ~tTGt~~  321 (477)
T PLN02494        315 TTTGNKD  321 (477)
T ss_pred             ECCCCcc
Confidence            9877543

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.46  E-value=0.025  Score=50.68  Aligned_cols=91  Identities=20%  Similarity=0.254  Sum_probs=59.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVG   85 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~   85 (263)
                      +++|.| .|..|...++.|.+.|++|.+.+++....   .......+...++.+..+.-.+.+.+...+.+.|.||...|
T Consensus         2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~---~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~g   77 (459)
T PRK02705          2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPE---LLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPG   77 (459)
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchh---hHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCC
Confidence            689999 59999999999999999999988774321   11111223334566665554455555566778999999888


Q ss_pred             CccchhHHHHHHHHHHhC
Q 044721           86 HTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        86 ~~~~~~~~~l~~~~~~~~  103 (263)
                      ...   ...++..+.+.+
T Consensus        78 i~~---~~~~~~~a~~~~   92 (459)
T PRK02705         78 IPW---DHPTLVELRERG   92 (459)
T ss_pred             CCC---CCHHHHHHHHcC
Confidence            763   123444455554

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.45  E-value=0.0084  Score=50.49  Aligned_cols=33  Identities=36%  Similarity=0.496  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|.| .|.+|+.+++.|++.|++|.+.+|++
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~   35 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNP   35 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            5899999 69999999999999999999998883

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.45  E-value=0.016  Score=48.91  Aligned_cols=76  Identities=18%  Similarity=0.214  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +.+|.|.||||++|..+++.|.++.+ ++..+..+..               .       |+.+   .++.++++|++|.
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~---------------~-------~~~~---~~~~~~~~DvvFl   56 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKR---------------K-------DAAA---RRELLNAADVAIL   56 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCC---------------C-------cccC---chhhhcCCCEEEE
Confidence            46899999999999999999998863 4444443311               0       1111   1245668999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +.+..   ....+.+.+.+.| . ++|
T Consensus        57 alp~~---~s~~~~~~~~~~g-~-~VI   78 (313)
T PRK11863         57 CLPDD---AAREAVALIDNPA-T-RVI   78 (313)
T ss_pred             CCCHH---HHHHHHHHHHhCC-C-EEE
Confidence            88643   4455666666666 4 355

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.43  E-value=0.025  Score=48.71  Aligned_cols=89  Identities=15%  Similarity=0.313  Sum_probs=55.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-HCCCC---EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASV-KAGHP---TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|.|.||||.+|+.+.+.|. ++.+.   +++++.+.+.   .+.   ..+.+...  ..-++.+.    +.|+++|++
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~---g~~---~~f~~~~~--~v~~~~~~----~~~~~vDiv   68 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLG---QAA---PSFGGTTG--TLQDAFDI----DALKALDII   68 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhC---CCc---CCCCCCcc--eEEcCccc----ccccCCCEE
Confidence            478999999999999999999 55654   3444332111   000   01111122  22233332    245789999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |.++|..   ....+...+.++| +..++
T Consensus        69 ffa~g~~---~s~~~~p~~~~aG-~~~~V   93 (366)
T TIGR01745        69 ITCQGGD---YTNEIYPKLRESG-WQGYW   93 (366)
T ss_pred             EEcCCHH---HHHHHHHHHHhCC-CCeEE
Confidence            9999854   5667888888888 76444

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.42  E-value=0.011  Score=50.10  Aligned_cols=76  Identities=18%  Similarity=0.195  Sum_probs=47.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |+|.|.|+ |.+|..++..|+..|  .+|.+++++............... .........   .|.    +.++++|++|
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEE
Confidence            47999997 999999999999999  579999998432211111111000 001111121   122    3478999999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      .+++...
T Consensus        73 ita~~~~   79 (308)
T cd05292          73 ITAGANQ   79 (308)
T ss_pred             EccCCCC
Confidence            9999764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.41  E-value=0.011  Score=49.07  Aligned_cols=57  Identities=18%  Similarity=0.286  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|.+..+|+.++..|.++|++|+++.++.                             .++++..++.|++|.
T Consensus       158 ~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-----------------------------~~l~~~~~~ADIvi~  208 (285)
T PRK10792        158 YGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-----------------------------KNLRHHVRNADLLVV  208 (285)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-----------------------------CCHHHHHhhCCEEEE
Confidence            579999999999999999999999999999876541                             124566778999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      .+|...
T Consensus       209 avG~p~  214 (285)
T PRK10792        209 AVGKPG  214 (285)
T ss_pred             cCCCcc
Confidence            998764

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.40  E-value=0.023  Score=49.72  Aligned_cols=86  Identities=17%  Similarity=0.202  Sum_probs=61.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      .+++|.| .|.+|+.+++.|.++|.++++++.+.     .     +.....+..++.+|.+|++.++++ +++++.++-+
T Consensus       241 ~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~-----~-----~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~  309 (393)
T PRK10537        241 DHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLG-----L-----EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL  309 (393)
T ss_pred             CeEEEEC-CChHHHHHHHHHHHCCCCEEEEECch-----h-----hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence            4688888 59999999999999999998888551     1     111134678999999999998874 6789999877


Q ss_pred             CCCccchhHHHHHHHHHHhC
Q 044721           84 VGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~  103 (263)
                      .....  .+..++..+++.+
T Consensus       310 t~dD~--~Nl~ivL~ar~l~  327 (393)
T PRK10537        310 RDNDA--DNAFVVLAAKEMS  327 (393)
T ss_pred             CCChH--HHHHHHHHHHHhC
Confidence            65432  2233444556555

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.40  E-value=0.022  Score=48.53  Aligned_cols=34  Identities=18%  Similarity=0.180  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      .+|++.|.| .|.||+++++.|..-|.+|++.++.
T Consensus       141 ~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~  174 (324)
T COG0111         141 AGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPY  174 (324)
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCC
Confidence            478999999 6999999999999999999999983

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.39  E-value=0.052  Score=45.76  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|.|.| .|.+|..++..|++.|++|++.+|++
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~   34 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNP   34 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            4799999 69999999999999999999999984

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.39  E-value=0.019  Score=51.09  Aligned_cols=69  Identities=17%  Similarity=0.247  Sum_probs=49.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..+++++|.| .|.||+.+++.|...|++|+++.+++.     +.....   ..++...        .++++++++|+|+
T Consensus       252 LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~-----~a~~A~---~~G~~~~--------~leell~~ADIVI  314 (476)
T PTZ00075        252 IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPI-----CALQAA---MEGYQVV--------TLEDVVETADIFV  314 (476)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCch-----hHHHHH---hcCceec--------cHHHHHhcCCEEE
Confidence            4689999999 589999999999999999999888742     221101   1122221        3556788999999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.|..
T Consensus       315 ~atGt~  320 (476)
T PTZ00075        315 TATGNK  320 (476)
T ss_pred             ECCCcc
Confidence            987643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.38  E-value=0.018  Score=51.49  Aligned_cols=29  Identities=14%  Similarity=0.242  Sum_probs=26.5

Q ss_pred             EEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            9 FIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         9 VtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |+||+|++|.++++.|...|++|+.+.+.
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~   71 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDG   71 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcc
Confidence            88889999999999999999999987665

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.37  E-value=0.032  Score=50.07  Aligned_cols=130  Identities=21%  Similarity=0.243  Sum_probs=74.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +++|+|.| .|..|.++++.|.+.|++|++.+++.......   ....+...++.++.++.. +    +.+.++|.||..
T Consensus        14 ~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~---~~~~l~~~gi~~~~~~~~-~----~~~~~~dlVV~S   84 (458)
T PRK01710         14 NKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEELGE---VSNELKELGVKLVLGENY-L----DKLDGFDVIFKT   84 (458)
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCccchH---HHHHHHhCCCEEEeCCCC-h----HHhccCCEEEEC
Confidence            57899999 59999999999999999999998774321011   111222335556554332 2    224678999999


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceeeeccc-cCC-CCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFFPSEF-GND-VDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~-g~~-~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      .|...   ....+..+.+.+ ++.+=-..+ ... ..........++-..++..+.++++..+..
T Consensus        85 pgi~~---~~p~~~~a~~~~-i~i~s~~e~~~~~~~~~vIaITGTnGKTTT~~ll~~iL~~~g~~  145 (458)
T PRK01710         85 PSMRI---DSPELVKAKEEG-AYITSEMEEFIKYCPAKVFGVTGSDGKTTTTTLIYEMLKEEGYK  145 (458)
T ss_pred             CCCCC---CchHHHHHHHcC-CcEEechHHhhhhcCCCEEEEECCCCHHHHHHHHHHHHHhCCCC
Confidence            77653   234566666666 553210000 000 001111122344455777777777766654

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.36  E-value=0.031  Score=44.36  Aligned_cols=89  Identities=25%  Similarity=0.305  Sum_probs=53.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCC-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA--GHP-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~--g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +++.|.| .|.||..+++.+...  +.+ +.+.+|+     .++.+.+......+      +.   .++.+++.++|.++
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~-----~ek~~~~~~~~~~~------~~---s~ide~~~~~DlvV   65 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRD-----EEKAKELEASVGRR------CV---SDIDELIAEVDLVV   65 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCC-----HHHHHHHHhhcCCC------cc---ccHHHHhhccceee
Confidence            4688899 699999999887754  355 5555666     44444333221111      11   33444556778888


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      -+|+..   ..+.+...+.++| +..+|.|.
T Consensus        66 EaAS~~---Av~e~~~~~L~~g-~d~iV~SV   92 (255)
T COG1712          66 EAASPE---AVREYVPKILKAG-IDVIVMSV   92 (255)
T ss_pred             eeCCHH---HHHHHhHHHHhcC-CCEEEEec
Confidence            877753   3444555666666 66666543

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.36  E-value=0.016  Score=48.70  Aligned_cols=76  Identities=20%  Similarity=0.311  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHh--cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAI--KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~--~~~   77 (263)
                      ++.+++|+|++|.+|..+++.+...|++|++++++     .++.+.+..+   ++. ...|..+.   +.+.+..  +++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~-----~~~~~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~~~~~  209 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGS-----EEKLEACRAL---GAD-VAINYRTEDFAEEVKEATGGRGV  209 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHc---CCC-EEEeCCchhHHHHHHHHhCCCCe
Confidence            35789999999999999999999999999988887     3333333332   121 12333332   2233333  269


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |.+++++|..
T Consensus       210 d~vi~~~g~~  219 (323)
T cd05276         210 DVILDMVGGD  219 (323)
T ss_pred             EEEEECCchH
Confidence            9999999853

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.35  E-value=0.014  Score=50.36  Aligned_cols=75  Identities=15%  Similarity=0.258  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhccCCcEEEEccCCCH----HHHHHHh-cC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKKLGVNLVIGDVLNH----ESLVKAI-KQ   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~----~~~~~~~-~~   76 (263)
                      .+.+++|+|++|.+|..+++.+...|.+|++++++     +++.+.+. .+   ++..+ .|..+.    +.+.+.. .+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~-----~~k~~~~~~~l---Ga~~v-i~~~~~~~~~~~i~~~~~~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-----SQKVDLLKNKL---GFDEA-FNYKEEPDLDAALKRYFPEG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHhc---CCCEE-EECCCcccHHHHHHHHCCCC
Confidence            35789999999999999999988899999888877     44544332 23   22221 233221    2233322 26


Q ss_pred             cCEEEEcCCC
Q 044721           77 VDVVISTVGH   86 (263)
Q Consensus        77 ~d~vv~~a~~   86 (263)
                      +|+++.+.|.
T Consensus       229 vD~v~d~vG~  238 (348)
T PLN03154        229 IDIYFDNVGG  238 (348)
T ss_pred             cEEEEECCCH
Confidence            9999999884

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.33  E-value=0.027  Score=47.67  Aligned_cols=78  Identities=18%  Similarity=0.204  Sum_probs=46.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCc-EEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGV-NLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      |+|.|.|+ |.+|..++..|+..|+ +|++++++....   +.+.++ +..+.. ......+.-..+.++ ++++|++|-
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~---~g~a~d-~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIi   75 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIP---QGKALD-MYEASPVGGFDTKVTGTNNYAD-TANSDIVVI   75 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChh---HHHHHh-hhhhhhccCCCcEEEecCCHHH-hCCCCEEEE
Confidence            58999996 9999999999999886 899999864321   111110 101100 000011111112233 678999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      ++|...
T Consensus        76 tag~p~   81 (305)
T TIGR01763        76 TAGLPR   81 (305)
T ss_pred             cCCCCC
Confidence            999654

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.33  E-value=0.022  Score=39.84  Aligned_cols=81  Identities=19%  Similarity=0.247  Sum_probs=54.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +++++++|.|+ |.+|.+-++.|++.|++|++++..     .+..       +..+.+..-++      ++.+++.|.||
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~-----~~~~-------~~~i~~~~~~~------~~~l~~~~lV~   65 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE-----IEFS-------EGLIQLIRREF------EEDLDGADLVF   65 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS-----EHHH-------HTSCEEEESS-------GGGCTTESEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc-----hhhh-------hhHHHHHhhhH------HHHHhhheEEE
Confidence            36789999996 999999999999999999999877     2001       13344444443      23477888888


Q ss_pred             EcCCCccchhHHHHHHHHHHhC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      .+.+..  .....+.+.+.+.+
T Consensus        66 ~at~d~--~~n~~i~~~a~~~~   85 (103)
T PF13241_consen   66 AATDDP--ELNEAIYADARARG   85 (103)
T ss_dssp             E-SS-H--HHHHHHHHHHHHTT
T ss_pred             ecCCCH--HHHHHHHHHHhhCC
Confidence            665543  34456777777666

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.32  E-value=0.0094  Score=52.74  Aligned_cols=90  Identities=10%  Similarity=0.096  Sum_probs=54.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC---CC----CEEEEEcCCCCCCcchhh----hhhhhc---cCCcEEEEccCCCHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA---GH----PTFVLVRESTLSAPSKSQ----LLDHFK---KLGVNLVIGDVLNHES   69 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~---g~----~V~~~~r~~~~~~~~~~~----~~~~~~---~~~~~~~~~D~~~~~~   69 (263)
                      .-+|+||||+|.||++++..++.-   |.    .+++++....   .++++    .+++..   ..++.+. .      +
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~---~~~l~G~amDL~D~a~pll~~v~i~-~------~  192 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPEN---LEKLKGLVMEVEDLAFPLLRGISVT-T------D  192 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCc---hhhHHHHHHHHHHhHHhhcCCcEEE-E------C
Confidence            457999999999999999999974   42    2555555311   11211    111110   1122222 1      1


Q ss_pred             HHHHhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHhC
Q 044721           70 LVKAIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEAG  103 (263)
Q Consensus        70 ~~~~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~  103 (263)
                      -.+.|+++|++|.++|...-             ...+.+.+++.+..
T Consensus       193 ~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a  239 (452)
T cd05295         193 LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA  239 (452)
T ss_pred             CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            24678999999999998641             12355566666666

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.32  E-value=0.023  Score=49.92  Aligned_cols=71  Identities=15%  Similarity=0.325  Sum_probs=52.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      .|+|+|+|+ |..|+.+++.+.+.|++|++++.++...  ...     + ..  ..+..|..|.+.+.++++  ++|.|+
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~--~~~-----~-ad--~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAP--AMQ-----V-AH--RSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--hHH-----h-hh--heEECCCCCHHHHHHHHHHhCCCEEE
Confidence            468999995 8999999999999999999988875321  000     0 01  245678889888888887  899887


Q ss_pred             EcCC
Q 044721           82 STVG   85 (263)
Q Consensus        82 ~~a~   85 (263)
                      ....
T Consensus        81 ~~~e   84 (395)
T PRK09288         81 PEIE   84 (395)
T ss_pred             EeeC
Confidence            6543

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.32  E-value=0.02  Score=48.56  Aligned_cols=76  Identities=17%  Similarity=0.254  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHH---HHh--cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLV---KAI--KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~--~~~   77 (263)
                      .+.+++|+|+++.+|..+++.+...|++|++++++     +++.+.+...   ... ...|..+.+...   +..  .++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~-----~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~  236 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGS-----EDKLERAKEL---GAD-YVIDYRKEDFVREVRELTGKRGV  236 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCC-eEEecCChHHHHHHHHHhCCCCC
Confidence            35689999999999999999999999999998887     3333333222   111 123554443333   222  268


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |.+++++|..
T Consensus       237 d~~i~~~g~~  246 (342)
T cd08266         237 DVVVEHVGAA  246 (342)
T ss_pred             cEEEECCcHH
Confidence            9999999853

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.31  E-value=0.017  Score=48.11  Aligned_cols=75  Identities=21%  Similarity=0.298  Sum_probs=60.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      -++.|.|+ |.+|..-++-....|++|++++++     ..+++.++.+...+++..   .+++..+++.+++.|.+|...
T Consensus       169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n-----~~rl~~ldd~f~~rv~~~---~st~~~iee~v~~aDlvIgaV  239 (371)
T COG0686         169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLN-----IDRLRQLDDLFGGRVHTL---YSTPSNIEEAVKKADLVIGAV  239 (371)
T ss_pred             ccEEEECC-ccccchHHHHHhccCCeeEEEecC-----HHHHhhhhHhhCceeEEE---EcCHHHHHHHhhhccEEEEEE
Confidence            46888996 999999999999999999999999     667776666655555544   567888999999999998875


Q ss_pred             CCcc
Q 044721           85 GHTL   88 (263)
Q Consensus        85 ~~~~   88 (263)
                      =...
T Consensus       240 LIpg  243 (371)
T COG0686         240 LIPG  243 (371)
T ss_pred             EecC
Confidence            4444

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.30  E-value=0.0085  Score=50.33  Aligned_cols=32  Identities=31%  Similarity=0.352  Sum_probs=28.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +|.|.| .|.+|+.++..|++.|++|++.+|++
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~   32 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGP   32 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            477888 69999999999999999999999883

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.01  Score=49.25  Aligned_cols=57  Identities=14%  Similarity=0.321  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+|++.|.|.||.+|+.++..|+++|++|+++ ++..                            .++++..+++|+||.
T Consensus       157 ~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s~t----------------------------~~l~~~~~~ADIVI~  207 (284)
T PRK14179        157 EGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HSRT----------------------------RNLAEVARKADILVV  207 (284)
T ss_pred             CCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CCCC----------------------------CCHHHHHhhCCEEEE
Confidence            57999999999999999999999999999986 2210                            024566778999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      +.|...
T Consensus       208 avg~~~  213 (284)
T PRK14179        208 AIGRGH  213 (284)
T ss_pred             ecCccc
Confidence            988764

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.27  E-value=0.16  Score=42.13  Aligned_cols=94  Identities=18%  Similarity=0.253  Sum_probs=53.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEc-CCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVK-AGHPTFVLVR-ESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|.|.|++|.+|+.+++.+.+ .+.+++.... ............+......++. +   ..|.+.+   ...+|++|-
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~-~---~~d~~~l---~~~~DvVId   74 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELAGIGKVGVP-V---TDDLEAV---ETDPDVLID   74 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhcCcCcCCce-e---eCCHHHh---cCCCCEEEE
Confidence            5899999999999999999997 4677666543 3221100000000000001111 1   1233333   356899998


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +..+   ......++.+.+++ +..++
T Consensus        75 fT~p---~~~~~~~~~al~~g-~~vVi   97 (266)
T TIGR00036        75 FTTP---EGVLNHLKFALEHG-VRLVV   97 (266)
T ss_pred             CCCh---HHHHHHHHHHHHCC-CCEEE
Confidence            8754   34566788888887 55444

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.26  E-value=0.038  Score=48.49  Aligned_cols=102  Identities=19%  Similarity=0.132  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC---C-----------Ccchhhhh-hhhc--cCC--cEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL---S-----------APSKSQLL-DHFK--KLG--VNLVIG   62 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~-----------~~~~~~~~-~~~~--~~~--~~~~~~   62 (263)
                      ...+|+|.|+ |++|+.+++.|+..|. ++++++.+.-.   .           ...|.+.+ +.+.  .+.  +..+..
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            3568999995 9999999999999995 68887765311   0           01122111 1111  233  334445


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .++ .+...++++++|+||.+....  .....+-+.+.+.+ ++.+.
T Consensus       120 ~i~-~~~~~~~~~~~D~Vvd~~d~~--~~r~~ln~~~~~~~-~p~v~  162 (392)
T PRK07878        120 RLD-PSNAVELFSQYDLILDGTDNF--ATRYLVNDAAVLAG-KPYVW  162 (392)
T ss_pred             cCC-hhHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            554 345677899999999987543  33344557778888 77655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	263
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		2e-51
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		8e-45
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		3e-46
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		5e-40
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		4e-39
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		2e-28
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		5e-36
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		3e-24
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		8e-36
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		5e-24
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		9e-36
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		6e-24
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		2e-35
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		1e-23
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		3e-35
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		2e-23
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		4e-28
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		2e-23

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/150 (66%), Positives = 118/150 (78%), Gaps = 1/150 (0%)
Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS-KSQLLDHFKKLGVNL 59
           M S+S+IL IG TGYIG+ + +AS+  GHPTF+LVREST S+ S K+QLL+ FK  G N+
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60
Query: 60  VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
           V G + +H SLV+A+K VDVVISTVG   +  QV II AIKE G +KRFFPSEFGNDVD 
Sbjct: 61  VHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN 120
Query: 120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           VHAVEPAKS F  KAK+RRA+EAEGIPYTY
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTY 150

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score =  177 bits (448), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 106/140 (75%)
Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKI 183
           E   S+ + KA++  + +A G    +G + +H SLV+A+K VDVVISTVG   +  QV I
Sbjct: 37  ESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNI 96
Query: 184 IAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFF 243
           I AIKE G VKRFFPSEFGNDVD V+AVEPAKS F  KAK+RRA+EAEGIPYTYV+SN F
Sbjct: 97  IKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCF 156
Query: 244 AGYFLPNLSQPGATAPPRDK 263
           AGYFL +L+Q G TAPPRDK
Sbjct: 157 AGYFLRSLAQAGLTAPPRDK 176

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 125/169 (73%), Gaps = 7/169 (4%)
Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA--PSKSQLLDHFKKLGVNLV 60
           +++KIL +G TG IG+ IV AS+KAG+PT+ LVR++  +A   +K +L+D+++ LGV L+
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII AIKEAGN+K+FFPSEFG DVDR 
Sbjct: 61  EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRH 120
Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH---GSLVKAIKQVD 166
            AVEP +  F  KA IRR +EAEG+PYTY  +  H   G  ++ + Q+D
Sbjct: 121 DAVEPVRQVFEEKASIRRVIEAEGVPYTY--LCCHAFTGYFLRNLAQLD 167

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/132 (59%), Positives = 96/132 (72%)
Query: 132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAG 191
           TK ++    ++ G+    GD+ +H +LVKAIKQVD+VI   G  L+ DQVKII AIKEAG
Sbjct: 44  TKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103
Query: 192 NVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNL 251
           NVK+FFPSEFG DVDR +AVEP +  F  KA IRR +EAEG+PYTY+  + F GYFL NL
Sbjct: 104 NVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNL 163
Query: 252 SQPGATAPPRDK 263
           +Q  AT PPRDK
Sbjct: 164 AQLDATDPPRDK 175

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score =  157 bits (398), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/154 (52%), Positives = 106/154 (68%), Gaps = 5/154 (3%)
Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           M  KS++L +GGTGYIGK IV AS+  GHPT+VL R   +S   K Q+L +FK+LG  L+
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60
Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGND 116
              + +H+ LV A+KQVDVVIS +   +L     +Q+K++ AIKEAGNIKRF PSEFG D
Sbjct: 61  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 120
Query: 117 VDRV-HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
            D + HA++P    F  K K+RRA+EA  IPYTY
Sbjct: 121 PDIMEHALQPGSITFIDKRKVRRAIEAASIPYTY 154

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 83/116 (71%), Gaps = 6/116 (5%)
Query: 154 NHGSLVKAIKQVDVVISTVGHTLLA----DQVKIIAAIKEAGNVKRFFPSEFGNDVDRV- 208
           +H  LV A+KQVDVVIS +   +L+    +Q+K++ AIKEAGN+KRF PSEFG D D + 
Sbjct: 66  DHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME 125
Query: 209 NAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQ-PGATAPPRDK 263
           +A++P    F+ K K+RRA+EA  IPYTYV+SN FAGYF  +L+Q  G   PPRDK
Sbjct: 126 HALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK 181

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 71/145 (48%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL-SAPSKSQLLDHFKKLGVNLVIGDV 64
           KI+  GGTGYIGKF+V AS+   HPTF+  R  T  S PS  QL + F+ +GV ++ G++
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65
Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVE 124
             HE +V  +KQVD+VIS +   ++  Q+ II AIK AGNIKRF PS+FG + DR+  + 
Sbjct: 66  EEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP 125
Query: 125 PAKSAFATKAKIRRAVEAEGIPYTY 149
           P +S    K  IRRA+EA  +PYTY
Sbjct: 126 PFESVLEKKRIIRRAIEAAALPYTY 150

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 76/124 (61%)
Query: 132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAG 191
           +  ++R    + G+    G++  H  +V  +KQVD+VIS +   +++ Q+ II AIK AG
Sbjct: 45  SSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAG 104
Query: 192 NVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNL 251
           N+KRF PS+FG + DR+  + P +S    K  IRRA+EA  +PYTYV++N F  YF+  L
Sbjct: 105 NIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYL 164
Query: 252 SQPG 255
             P 
Sbjct: 165 LHPS 168

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score =  147 bits (370), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 100/146 (68%), Gaps = 4/146 (2%)
Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KSKIL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F+ LG  +V G+
Sbjct: 7   KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGE 62
Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           +  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGNIKRF PS+FG + DR++A+
Sbjct: 63  LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINAL 122
Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
            P ++    K  IRRA+E   IPYTY
Sbjct: 123 PPFEALIERKRMIRRAIEEANIPYTY 148

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 72/105 (68%)
Query: 150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN 209
           G++  H  LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS+FG + DR+N
Sbjct: 61  GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 120
Query: 210 AVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQP 254
           A+ P ++    K  IRRA+E   IPYTYV++N FA YF+  L +P
Sbjct: 121 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP 165

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 100/146 (68%), Gaps = 4/146 (2%)
Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KSKIL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F+ LG  +V G+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGE 66
Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           +  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGNIKRF PS+FG + DR++A+
Sbjct: 67  LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINAL 126
Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
            P ++    K  IRRA+E   IPYTY
Sbjct: 127 PPFEALIERKRMIRRAIEEANIPYTY 152

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 72/105 (68%)
Query: 150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN 209
           G++  H  LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS+FG + DR+N
Sbjct: 65  GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 210 AVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQP 254
           A+ P ++    K  IRRA+E   IPYTYV++N FA YF+  L +P
Sbjct: 125 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP 169

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 100/146 (68%), Gaps = 4/146 (2%)
Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KSKIL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F+ LG  +V G+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGE 66
Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           +  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGNIKRF PS+FG + DR++A+
Sbjct: 67  LDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINAL 126
Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
            P ++    +  IRRA+E   IPYTY
Sbjct: 127 PPFEALIERQRMIRRAIEEANIPYTY 152

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 72/105 (68%)
Query: 150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN 209
           G++  H  LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS+FG + DR+N
Sbjct: 65  GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 210 AVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQP 254
           A+ P ++    +  IRRA+E   IPYTYV++N FA YF+  L +P
Sbjct: 125 ALPPFEALIERQRMIRRAIEEANIPYTYVSANCFASYFINYLLRP 169

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 99/146 (67%), Gaps = 4/146 (2%)
Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KSKIL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F+ LG  +V G+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGE 66
Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAV 123
           +  HE LV+ +K+VDVVIS +      DQ KI+ AIK AGNIKRF PS+FG + DR++A+
Sbjct: 67  LDEHEKLVELMKKVDVVISALAVPQYLDQFKILEAIKVAGNIKRFLPSDFGVEEDRINAL 126
Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTY 149
            P ++    K  IRRA+E   IPYTY
Sbjct: 127 PPFEALIERKRMIRRAIEEANIPYTY 152

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 71/105 (67%)
Query: 150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN 209
           G++  H  LV+ +K+VDVVIS +      DQ KI+ AIK AGN+KRF PS+FG + DR+N
Sbjct: 65  GELDEHEKLVELMKKVDVVISALAVPQYLDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 210 AVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQP 254
           A+ P ++    K  IRRA+E   IPYTYV++N FA YF+  L +P
Sbjct: 125 ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP 169

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Query: 2   ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI 61
           + K ++L  G TG+IG+F+  AS+ A  PT++L R    S PSK+++    +  G  +V 
Sbjct: 8   SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVY 66
Query: 62  GDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
           G +   E++ K +K+  +D+V+STVG   + DQ+ ++ A+K  G IKRF PSEFG+DV+R
Sbjct: 67  GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNR 126
Query: 120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
              VEP  + +  K ++R+ VE  GIP+TY
Sbjct: 127 ADPVEPGLNMYREKRRVRQLVEESGIPFTY 156

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQ--VDVVISTVGHTLLADQVKIIAAIKE 189
           +KAKI +A+E +G    YG +    ++ K +K+  +D+V+STVG   + DQ+ ++ A+K 
Sbjct: 49  SKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKA 108
Query: 190 AGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLP 249
            G +KRF PSEFG+DV+R + VEP  + +  K ++R+ VE  GIP+TY+  N  A +   
Sbjct: 109 VGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYY 168
Query: 250 NLSQPGATAPPRD 262
           N   P    PP D
Sbjct: 169 NNIHPSEVLPPTD 181

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	263
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-57
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-41
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-56
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-41
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-55
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-41
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-54
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-34
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	6e-54
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-37
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	5e-50
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-35
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-21
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-10
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	1e-16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	7e-07
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-15
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	7e-15
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-14
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	4e-07
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-12
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-11
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-11
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-05
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-09
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	8e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-08
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-08
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	6e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	7e-07
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	8e-07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-06
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-06
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	5e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	5e-06
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	6e-06
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-05
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	4e-05
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-04
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-04
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	2e-04
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-04
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-04
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	3e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-04
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	5e-04

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  185 bits (470), Expect = 1e-57
 Identities = 98/150 (65%), Positives = 117/150 (78%), Gaps = 1/150 (0%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-PSKSQLLDHFKKLGVNL 59
           M S+S+IL IG TGYIG+ + +AS+  GHPTF+LVREST S+   K+QLL+ FK  G N+
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60

Query: 60  VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
           V G + +H SLV+A+K VDVVISTVG   +  QV II AIKE G +KRFFPSEFGNDVD 
Sbjct: 61  VHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN 120

Query: 120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           VHAVEPAKS F  KAK+RRA+EAEGIPYTY
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTY 150

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  143 bits (361), Expect = 3e-41
 Identities = 88/140 (62%), Positives = 106/140 (75%)

Query: 124 EPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKI 183
           E   S+ + KA++  + +A G    +G + +H SLV+A+K VDVVISTVG   +  QV I
Sbjct: 37  ESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNI 96

Query: 184 IAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFF 243
           I AIKE G VKRFFPSEFGNDVD V+AVEPAKS F  KAK+RRA+EAEGIPYTYV+SN F
Sbjct: 97  IKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCF 156

Query: 244 AGYFLPNLSQPGATAPPRDK 263
           AGYFL +L+Q G TAPPRDK
Sbjct: 157 AGYFLRSLAQAGLTAPPRDK 176

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  180 bits (459), Expect = 9e-56
 Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 1/149 (0%)

Query: 2   ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQLLDHFKKLGVNLV 60
           +   KI+  GGTGYIGKF+V AS+   HPTF+  R  +  S PS  QL + F+ +GV ++
Sbjct: 2   SHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII 61

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            G++  HE +V  +KQVD+VIS +   ++  Q+ II AIK AGNIKRF PS+FG + DR+
Sbjct: 62  EGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRI 121

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
             + P +S    K  IRRA+EA  +PYTY
Sbjct: 122 KPLPPFESVLEKKRIIRRAIEAAALPYTY 150

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  143 bits (362), Expect = 2e-41
 Identities = 52/145 (35%), Positives = 81/145 (55%)

Query: 119 RVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLA 178
            ++A      +  +  ++R    + G+    G++  H  +V  +KQVD+VIS +   +++
Sbjct: 32  FIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPMIS 91

Query: 179 DQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYV 238
            Q+ II AIK AGN+KRF PS+FG + DR+  + P +S    K  IRRA+EA  +PYTYV
Sbjct: 92  SQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYV 151

Query: 239 ASNFFAGYFLPNLSQPGATAPPRDK 263
           ++N F  YF+  L  P       D 
Sbjct: 152 SANCFGAYFVNYLLHPSPHPNRNDD 176

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  179 bits (456), Expect = 2e-55
 Identities = 88/149 (59%), Positives = 116/149 (77%), Gaps = 2/149 (1%)

Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA--PSKSQLLDHFKKLGVNLV 60
           +++KIL +G TG IG+ IV AS+KAG+PT+ LVR++  +A   +K +L+D+++ LGV L+
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV 120
            GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII AIKEAGN+K+FFPSEFG DVDR 
Sbjct: 61  EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRH 120

Query: 121 HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
            AVEP +  F  KA IRR +EAEG+PYTY
Sbjct: 121 DAVEPVRQVFEEKASIRRVIEAEGVPYTY 149

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  142 bits (359), Expect = 4e-41
 Identities = 80/150 (53%), Positives = 100/150 (66%)

Query: 114 GNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVG 173
           GN    +       +   TK ++    ++ G+    GD+ +H +LVKAIKQVD+VI   G
Sbjct: 26  GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAG 85

Query: 174 HTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGI 233
             L+ DQVKII AIKEAGNVK+FFPSEFG DVDR +AVEP +  F  KA IRR +EAEG+
Sbjct: 86  RLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGV 145

Query: 234 PYTYVASNFFAGYFLPNLSQPGATAPPRDK 263
           PYTY+  + F GYFL NL+Q  AT PPRDK
Sbjct: 146 PYTYLCCHAFTGYFLRNLAQLDATDPPRDK 175

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  176 bits (448), Expect = 3e-54
 Identities = 80/154 (51%), Positives = 106/154 (68%), Gaps = 5/154 (3%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           M  KS++L +GGTGYIGK IV AS+  GHPT+VL R   +S   K Q+L +FK+LG  L+
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTL----LGDQVKIIAAIKEAGNIKRFFPSEFGND 116
              + +H+ LV A+KQVDVVIS +   +    + +Q+K++ AIKEAGNIKRF PSEFG D
Sbjct: 61  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 120

Query: 117 VDRV-HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
            D + HA++P    F  K K+RRA+EA  IPYTY
Sbjct: 121 PDIMEHALQPGSITFIDKRKVRRAIEAASIPYTY 154

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  125 bits (315), Expect = 2e-34
 Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 6/145 (4%)

Query: 125 PAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTL----LADQ 180
           P   +   K ++    +  G       + +H  LV A+KQVDVVIS +   +    + +Q
Sbjct: 37  PEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQ 96

Query: 181 VKIIAAIKEAGNVKRFFPSEFGNDVDRVN-AVEPAKSAFVTKAKIRRAVEAEGIPYTYVA 239
           +K++ AIKEAGN+KRF PSEFG D D +  A++P    F+ K K+RRA+EA  IPYTYV+
Sbjct: 97  LKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVS 156

Query: 240 SNFFAGYFLPNLSQ-PGATAPPRDK 263
           SN FAGYF  +L+Q  G   PPRDK
Sbjct: 157 SNMFAGYFAGSLAQLDGHMMPPRDK 181

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  175 bits (446), Expect = 6e-54
 Identities = 75/148 (50%), Positives = 99/148 (66%), Gaps = 4/148 (2%)

Query: 2   ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI 61
             KSKIL  GGTGYIG  +V+ S+K GHPT+V  R +     SK+ LLD F+ LG  +V 
Sbjct: 9   GMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN----SSKTTLLDEFQSLGAIIVK 64

Query: 62  GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVH 121
           G++  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGNIKRF PS+FG + DR++
Sbjct: 65  GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124

Query: 122 AVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           A+ P ++    K  IRRA+E   IPYTY
Sbjct: 125 ALPPFEALIERKRMIRRAIEEANIPYTY 152

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  132 bits (334), Expect = 3e-37
 Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 3/132 (2%)

Query: 132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAG 191
           +K  +    ++ G     G++  H  LV+ +K+VDVVIS +    + DQ KI+ AIK AG
Sbjct: 47  SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAG 106

Query: 192 NVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNL 251
           N+KRF PS+FG + DR+NA+ P ++    K  IRRA+E   IPYTYV++N FA YF+  L
Sbjct: 107 NIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYL 166

Query: 252 SQPGATAPPRDK 263
            +P     P+D+
Sbjct: 167 LRP---YDPKDE 175

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  166 bits (422), Expect = 5e-50
 Identities = 60/150 (40%), Positives = 95/150 (63%), Gaps = 3/150 (2%)

Query: 2   ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI 61
           + K ++L  G TG+IG+F+  AS+ A  PT++L R    S PSK+++    +  G  +V 
Sbjct: 8   SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVY 66

Query: 62  GDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
           G +   E++ K +K+  +D+V+STVG   + DQ+ ++ A+K  G IKRF PSEFG+DV+R
Sbjct: 67  GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNR 126

Query: 120 VHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
              VEP  + +  K ++R+ VE  GIP+TY
Sbjct: 127 ADPVEPGLNMYREKRRVRQLVEESGIPFTY 156

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  128 bits (324), Expect = 1e-35
 Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 2/138 (1%)

Query: 128 SAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQ--VDVVISTVGHTLLADQVKIIA 185
               +KAKI +A+E +G    YG +    ++ K +K+  +D+V+STVG   + DQ+ ++ 
Sbjct: 45  PRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVK 104

Query: 186 AIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAG 245
           A+K  G +KRF PSEFG+DV+R + VEP  + +  K ++R+ VE  GIP+TY+  N  A 
Sbjct: 105 AMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIAS 164

Query: 246 YFLPNLSQPGATAPPRDK 263
           +   N   P    PP D 
Sbjct: 165 WPYYNNIHPSEVLPPTDF 182

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 88.1 bits (219), Expect = 2e-21
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 19/157 (12%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA K KI   G TG  G   +  +V+AG+   VLVR+      S+   L        ++V
Sbjct: 1   MAVK-KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD-----SSR---LPSEGPRPAHVV 51

Query: 61  IGDVLNHESLVKAIKQVDVVISTVG--------HTLLGDQVKIIAAIKEAGNIKRF-FPS 111
           +GDVL    + K +   D VI  +G          +      I+AA+K  G + +    +
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACT 110

Query: 112 EFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
                 D        ++      ++ + +   G+ Y 
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYV 147

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 138 RAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVG-------HTLLADQVK-IIAAIKE 189
            +          GDVL    + K +   D VI  +G        T++++  + I+AA+K 
Sbjct: 41  PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKA 100

Query: 190 AGNVKRF-FPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYV 238
            G V +    +      D        ++      ++ + +   G+ Y  V
Sbjct: 101 HG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAV 149

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 76.0 bits (187), Expect = 1e-16
 Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 27/156 (17%)

Query: 6   KILFIGGTGYIGKFIV-EASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
            +L +G  G I + ++ + + K      +  R+     P+K             +++GDV
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQ-----PAKIHKPYP---TNSQIIMGDV 76

Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQVK-IIAAIKEAGNIKRF-----------FPSE 112
           LNH +L +A++  D+V + +    L  Q   +IAA+K    +KR             P +
Sbjct: 77  LNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGK 135

Query: 113 FGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
           F    + V              +   A+EA G+ YT
Sbjct: 136 FVEWNNAV-----IGEPLKPFRRAADAIEASGLEYT 166

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 47.9 bits (114), Expect = 7e-07
 Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 18/120 (15%)

Query: 138 RAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVK-IIAAIKEAGNVKRF 196
                       GDVLNH +L +A++  D+V + +    L  Q   +IAA+K    VKR 
Sbjct: 62  HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRL 120

Query: 197 -----------FPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAG 245
                       P +F    + V              +   A+EA G+ YT +   +   
Sbjct: 121 IFVLSLGIYDEVPGKFVEWNNAVI-----GEPLKPFRRAADAIEASGLEYTILRPAWLTD 175

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 71.6 bits (176), Expect = 4e-15
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           ++L +G  G + ++++      GH    +VR       ++ Q  +  ++   ++V+ ++ 
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVR-------NEEQGPELRERGASDIVVANL- 74

Query: 66  NHESLVKAIKQVDVVISTVGHTLLGD-----------QVKIIAAIKEAGNIKRF-FPSEF 113
             E    A   +D V+   G                  +K I   ++ G IKRF   S  
Sbjct: 75  -EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSV 132

Query: 114 GNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
           G   D        +     K      ++   + YT
Sbjct: 133 GTV-DPDQGPMNMRHYLVAKRLADDELKRSSLDYT 166

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 70.9 bits (174), Expect = 7e-15
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 19/117 (16%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           M    KI+ IG +G++G  ++  ++  G     +VR      P K ++ +      + + 
Sbjct: 1   MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRH-----PEKIKIENE----HLKVK 51

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQV---------KIIAAIKEAGNIKRF 108
             DV + + + +  K  D VIS          +          II  +K+AG + RF
Sbjct: 52  KADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRF 107

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 21/122 (17%)

Query: 137 RRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHT-----LLADQVK----IIAAI 187
           +  +E E +     DV +   + +  K  D VIS          +  + +K    II  +
Sbjct: 40  KIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGV 99

Query: 188 KEAGNVKRF-----FPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE------GIPYT 236
           K+AG V RF       S F     R+          +   K               I + 
Sbjct: 100 KKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWV 158

Query: 237 YV 238
           + 
Sbjct: 159 FF 160

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 69.3 bits (169), Expect = 3e-14
 Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 13/150 (8%)

Query: 6   KILFIGGTGYIGKFIVE-ASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
            I  +G  G I + +             +  R+            +      V ++ G  
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ-----LKTRIPPEIIDHERVTVIEGSF 61

Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFG------NDVD 118
            N   L +A+   +VV      +   D   I+ A+      +    S  G        ++
Sbjct: 62  QNPGXLEQAVTNAEVVFVGAMES-GSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALE 120

Query: 119 RVHAVEPAKSAFATKAKIRRAVEAEGIPYT 148
           +        S    + + R  +    + YT
Sbjct: 121 KWTFDNLPISYVQGERQARNVLRESNLNYT 150

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 48.5 bits (115), Expect = 4e-07
 Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 7/114 (6%)

Query: 131 ATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEA 190
                    ++ E +    G   N G L +A+   +VV      +  +D   I+ A+   
Sbjct: 40  LKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES-GSDMASIVKALSRX 98

Query: 191 GNVKRFFPSEFG------NDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYV 238
              +    S  G        +++        S    + + R  +    + YT +
Sbjct: 99  NIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTIL 152

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 24/156 (15%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV- 64
           KI  +G TG +GK ++++     +  +   R+       +    +      V  V  DV 
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARK-----VEQVPQYN-----NVKAVHFDVD 51

Query: 65  LNHESLVKAIKQVDVVISTVGHTLLGDQ-------VKIIAAIKEAGNIKRF-FPSEFGND 116
              E + K +  +D +I+  G              VK++ A ++A  +KRF   S   + 
Sbjct: 52  WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL 110

Query: 117 VDRVHAVEPAKSAFA-TKAKIRRA---VEAEGIPYT 148
                      +      AK        +   + YT
Sbjct: 111 QPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYT 146

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 64.1 bits (156), Expect = 2e-12
 Identities = 34/216 (15%), Positives = 63/216 (29%), Gaps = 45/216 (20%)

Query: 2   ASKSKILFIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKKLGVNL 59
           A+   +L  G +G  G+ + +   +         LVR          + +        ++
Sbjct: 2   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKEKI----GGEADV 52

Query: 60  VIGDVLNHESLVKAIKQVDVVISTVGHTLLGD---------------------------- 91
            IGD+ + +S+  A + +D ++                                      
Sbjct: 53  FIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 112

Query: 92  QVKIIAAIKEAGNIKRF-FPSEFGNDVDRVHAVEPAKSA-FATKAKIRRAVEAEGIPYTY 149
           Q   I A K AG +K        G         +         K K  + +   G PYT 
Sbjct: 113 QKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYT- 170

Query: 150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIA 185
             ++  G L+     V  ++      LL    K + 
Sbjct: 171 --IIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVP 204

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 22/116 (18%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           K   +G TG +G     A   AGH   ++ R         S  +     L     + ++L
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHR--------PSSQIQRLAYLEPECRVAEML 66

Query: 66  NHESLVKAIKQVDVVISTVGHTLLGDQVK-------------IIAAIKEAGNIKRF 108
           +H  L +A++ +D VI + G+     +                 AA  +A  + R 
Sbjct: 67  DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRI 121

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 16/157 (10%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKKLGVNL 59
           M  K  ++  GGTG  G  +    ++ G     V+ R +     +K       +  G  +
Sbjct: 2   MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKKAAK-----ELRLQGAEV 55

Query: 60  VIGDVLNHESLVKAIKQVDVVIS-TVGHTLLGDQ------VKIIAAIKEAGNIKRFFPSE 112
           V GD  +   +  A+         T        +        +    +  G +     S 
Sbjct: 56  VQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSG 114

Query: 113 FGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
             N + ++ A   A + F  K ++       G+P T 
Sbjct: 115 LEN-IKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTS 150

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 13/132 (9%)

Query: 138 RAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVIS------TVGHTLLADQVK-IIAAIKEA 190
           + +  +G     GD  +   +  A+              +        Q K +    +  
Sbjct: 46  KELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRL 105

Query: 191 GNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPN 250
           G +     S   N + ++ A   A + F  K ++       G+P T V        +  N
Sbjct: 106 G-LHYVVYSGLEN-IKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVR----LPCYFEN 159

Query: 251 LSQPGATAPPRD 262
           L          D
Sbjct: 160 LLSHFLPQKAPD 171

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 1   MASKSKILFI-GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL 59
           MA + K + + G TG  G  ++  +   GH     V              +      V L
Sbjct: 1   MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS-----LKGLIAEELQAIPNVTL 55

Query: 60  VIGDVLN-HESLVKAIKQVDVV--ISTVGHTLLGDQVK-IIAAIKEAGNIKRFFPSEFGN 115
             G +LN    +    +   +    +T          K +  A K AG I+ +  S   +
Sbjct: 56  FQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115

Query: 116 DVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
               ++   PA   +A K  +   V   G+P T+
Sbjct: 116 --HSLYGPWPAVPMWAPKFTVENYVRQLGLPSTF 147

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 10/137 (7%)

Query: 131 ATKAKIRRAVEAEGIPYTYGDVLNHGSLVK-AIKQVDVV--ISTVGHTLLADQVK-IIAA 186
                         +    G +LN+  L+    +   +    +T          K +  A
Sbjct: 39  LKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADA 98

Query: 187 IKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGY 246
            K AG ++ +  S   +    +    PA   +  K  +   V   G+P T+V     AG 
Sbjct: 99  AKRAGTIQHYIYSSMPDH--SLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVY----AGI 152

Query: 247 FLPNLSQPGATAPPRDK 263
           +  N +         + 
Sbjct: 153 YNNNFTSLPYPLFQMEL 169

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 17/111 (15%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           KI  +G TG  G  IV  + + GH    +VR+     P K+        LG  +      
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD-----PQKAADR-----LGATVATLVKE 51

Query: 66  NHESLVKAIKQVDVVISTVGH-------TLLGDQVKIIAAIKEAGNIKRFF 109
                   +  VD V+  +          L  D    + ++    +    F
Sbjct: 52  PLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVF 102

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 18/110 (16%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           KI  IG TG  G  I+E +   GH    +VR        K           +N++  D+ 
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN-----AGKITQTHK----DINILQKDIF 52

Query: 66  NHESLVKAIKQVDVVISTVGH------TLLGDQVKIIAAIKEAGNIKRFF 109
             +  +  +   +VV+   G         +     +I+ +       R  
Sbjct: 53  --DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV-SPRLL 99

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 36/157 (22%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
            I+  G TG++G  I   ++      F + VR        K        +  V++   D 
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-----NVEKVP---DDWRGKVSVRQLDY 53

Query: 65  LNHESLVKAIKQVDVV--ISTVGHTLLGDQVK----IIAAIKEAGNIKRFFPSEFGNDVD 118
            N ES+V+A K +D V  I ++ H     ++     ++ A K++G             V 
Sbjct: 54  FNQESMVEAFKGMDTVVFIPSIIHP-SFKRIPEVENLVYAAKQSG-------------VA 99

Query: 119 RV------HAVEPAKSAFA-TKAKIRRAVEAEGIPYT 148
            +                +       R +   GI YT
Sbjct: 100 HIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYT 136

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 32/153 (20%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
           I   G TG +G +++E+ +K    + +  +VR      P+K          G+ +   D 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRN-----PAK---AQALAAQGITVRQADY 53

Query: 65  LNHESLVKAIKQVDVV--ISTVGHTLLGDQVK-IIAAIKEAGNIKRFFPSEFGNDVDRV- 120
            +  +L  A++ V+ +  IS+        Q + +I A K AG             V  + 
Sbjct: 54  GDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-------------VKFIA 100

Query: 121 ----HAVEPAKSAFAT-KAKIRRAVEAEGIPYT 148
                  + +    A    +  + +   GI YT
Sbjct: 101 YTSLLHADTSPLGLADEHIETEKMLADSGIVYT 133

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 34/155 (21%)

Query: 7   ILFIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
           I   G TG +G  +++  +K    + +  +VR        K          GV +  GD 
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRN-----VEK---ASTLADQGVEVRHGDY 54

Query: 65  LNHESLVKAIKQVDVVI----STVGHTLLGDQVK-IIAAIKEAGNIKRFFPSEFGNDVDR 119
              ESL KA   V  ++        +TLL  Q   ++ A ++AG             V  
Sbjct: 55  NQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-------------VKH 101

Query: 120 V------HAVEPAKSAFATKAKIRRAVEAEGIPYT 148
           +       A E              A+    IPYT
Sbjct: 102 IAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYT 136

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 47.9 bits (114), Expect = 8e-07
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 29/163 (17%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPT--FVLVRESTLSAPSKSQLLDHFKKLGVN 58
           M +K  +  +G +G  G+ +++  ++ G  +   ++ R        +    D      VN
Sbjct: 16  MQNK-SVFILGASGETGRVLLKEILEQGLFSKVTLIGR--------RKLTFDEEAYKNVN 66

Query: 59  LVIGDVLNHESLVKAIKQVDVVISTVGHTLLG-----------DQVKIIAAIKEAGNIKR 107
             + D    +    A +  DV    +G T              D V   A + +AG  K 
Sbjct: 67  QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKH 126

Query: 108 FFPSEFGNDVDRVHAVEPAKSAFA-TKAKIRRAVEAEGIPYTY 149
           F        +    A + +   +   K ++   VE        
Sbjct: 127 FNL------LSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYS 163

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 28/128 (21%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVN-- 58
           +   S +L  G  G++   +VE  ++ G+     VR +  SA   + L   +        
Sbjct: 8   LPEGSLVLVTGANGFVASHVVEQLLEHGY----KVRGTARSASKLANLQKRWDAKYPGRF 63

Query: 59  --LVIGDVLNHESLVKAIKQVDVVISTVGHT------------LLGDQVK----IIAAIK 100
              V+ D+L   +  + IK    V     H             ++   +      + A  
Sbjct: 64  ETAVVEDMLKQGAYDEVIKGAAGVA----HIASVVSFSNKYDEVVTPAIGGTLNALRAAA 119

Query: 101 EAGNIKRF 108
              ++KRF
Sbjct: 120 ATPSVKRF 127

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 12/81 (14%)

Query: 1  MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
          MA K ++L  G  G +G+ + E          +        A                 V
Sbjct: 1  MAMK-RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP-----------NEECV 48

Query: 61 IGDVLNHESLVKAIKQVDVVI 81
            D+ +  ++   +   D ++
Sbjct: 49 QCDLADANAVNAMVAGCDGIV 69

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 46.5 bits (109), Expect = 5e-06
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA+K  +L + G+G++ +  ++    +G    V  R    +  S  +L    +      +
Sbjct: 1   MATK-SVL-MLGSGFVTRPTLDVLTDSGIKVTVACR----TLESAKKLSAGVQH--STPI 52

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIK 100
             DV +  +L   + + D+VIS + +T     +K     K
Sbjct: 53  SLDVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQK 92

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 45.8 bits (109), Expect = 5e-06
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 11/77 (14%)

Query: 5  SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
          +++L  G  G +G  I        H   +       +A +              +V  D+
Sbjct: 3  NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEA-----------HEEIVACDL 51

Query: 65 LNHESLVKAIKQVDVVI 81
           + +++   +K  D +I
Sbjct: 52 ADAQAVHDLVKDCDGII 68

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLG-----VN 58
           K ++   GGTG++G +I+++ ++ G+     V  +  + P + + +     L      ++
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYS----VNTTIRADPERKRDVSFLTNLPGASEKLH 56

Query: 59  LVIGDVLNHESLVKAIKQVDVVI---STVGHTLLGDQVKIIA-----------AIKEAGN 104
               D+ N +S   AI+    +    S +   +   +  +             A   +  
Sbjct: 57  FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116

Query: 105 IKRF 108
           +KRF
Sbjct: 117 VKRF 120

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 25/127 (19%)

Query: 1   MASKSK-ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLG--- 56
           M S+S+ +   G +G+IG ++V   ++ G+     VR +T+  P+  + + H   L    
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYT----VR-ATVRDPTNVKKVKHLLDLPKAE 55

Query: 57  --VNLVIGDVLNHESLVKAIKQVDVVI---STVGHTLLGDQVKIIA-----------AIK 100
             + L   D+ +  S  +AIK    V    + +       + ++I            +  
Sbjct: 56  THLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCA 115

Query: 101 EAGNIKR 107
            A  ++R
Sbjct: 116 AAKTVRR 122

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 24/103 (23%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
            A +  I  + G G IG+ I      + + +  +              L    ++GV   
Sbjct: 2   NAMRWNIC-VVGAGKIGQMIAALLKTSSNYSVTVADHDL-------AALAVLNRMGVATK 53

Query: 61  IGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAG 103
             D  +   L KA+   D VIS     L      I  A K AG
Sbjct: 54  QVDAKDEAGLAKALGGFDAVISAAPFFL---TPIIAKAAKAAG 93

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 20/115 (17%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ--LLDHFKKLGVN 58
           M     IL  GGTG  GK  V   +   +   ++V     S     Q  +   F    + 
Sbjct: 18  MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIV----YSRDELKQSEMAMEFNDPRMR 73

Query: 59  LVIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEF 113
             IGDV + E L  A++ VD+ I    H          AA+K    I  + P E 
Sbjct: 74  FFIGDVRDLERLNYALEGVDICI----HA---------AALKHVP-IAEYNPLEC 114

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 23/123 (18%)

Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLG----VN 58
            K     +GGTG++   +V+  ++ G+     V  +T+  P   + + H  +L     + 
Sbjct: 8   GKKTACVVGGTGFVASLLVKLLLQKGYA----VN-TTVRDPDNQKKVSHLLELQELGDLK 62

Query: 59  LVIGDVLNHESLVKAIKQVDVVI---STVGHTLLGDQVKIIA-----------AIKEAGN 104
           +   D+ +  S    I   D V    + V       +  +I            A   A +
Sbjct: 63  IFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKS 122

Query: 105 IKR 107
           +KR
Sbjct: 123 VKR 125

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 4  KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
             +L + G+G++ + +++                T++  + +      K  G   +  D
Sbjct: 23 GKNVL-LLGSGFVAQPVIDTLAANDD------INVTVACRTLANAQALAKPSGSKAISLD 75

Query: 64 VLNHESLVKAIKQVDVVISTV 84
          V +  +L K +   DVVIS +
Sbjct: 76 VTDDSALDKVLADNDVVISLI 96

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 8/78 (10%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          +IL  GG G +G  ++E  +  GH   V+   +T     K ++L      G++++ G V 
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT----GKREVLPP--VAGLSVIEGSVT 75

Query: 66 NHESLVKAIKQ--VDVVI 81
          +   L +A        V+
Sbjct: 76 DAGLLERAFDSFKPTHVV 93

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 34/155 (21%)

Query: 6   KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
             + I G G +G  +       GH    L R     +             GV  +I DV 
Sbjct: 4   SKILIAGCGDLGLELARRLTAQGHEVTGLRR-----SAQPMP-------AGVQTLIADVT 51

Query: 66  NHESLVKAIK-QVDVVISTV---------GHTLLGDQVKIIAAIKEAGNIKRF------- 108
             ++L   +  + ++++  V               + ++   +  E   ++         
Sbjct: 52  RPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG 111

Query: 109 -FPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA 142
            +  E    +D          +     K     EA
Sbjct: 112 VYGQEVEEWLDEDTPPIAKDFS----GKRMLEAEA 142

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 14/77 (18%)

Query: 10 IGGTGYIGKFIVEASVKAGHPT-----FVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
          +G TG IG  + E    A  P      + + R +  +    +          +N V  D+
Sbjct: 7  VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDN---------PINYVQCDI 57

Query: 65 LNHESLVKAIKQVDVVI 81
           + +     +  +  V 
Sbjct: 58 SDPDDSQAKLSPLTDVT 74

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 30/136 (22%)

Query: 1   MASKSK-ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL 59
           M S  K +L  G TG  G+ +++  +       V+       AP++  L +H +   ++ 
Sbjct: 1   MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVI-------APARKALAEHPR---LDN 50

Query: 60  VIGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
            +G +   E L +    +D     +G T           IKEAG+ + F        VD 
Sbjct: 51  PVGPL--AELLPQLDGSIDTAFCCLGTT-----------IKEAGSEEAFR------AVDF 91

Query: 120 VHAVEPAKSAFATKAK 135
              +   K A    A+
Sbjct: 92  DLPLAVGKRALEMGAR 107

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 8/80 (10%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS---APSKSQLLDHFKKLGVNLVIG 62
           I  IG  G +G+ + +  VK G      V + TL     P             V+    
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSG----AVDARAA 71

Query: 63 DVLNHESLVKAIK-QVDVVI 81
          D+       K ++ + DV+ 
Sbjct: 72 DLSAPGEAEKLVEARPDVIF 91

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 13/102 (12%)

Query: 1   MASKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKK---L 55
           M    KI+ I G  +G  G+   EA   AGH  +  +R+      S  + +  F +   +
Sbjct: 1   MVMSKKIILITGASSG-FGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDV 59

Query: 56  GVNLVIGDVLNHESLVKAIKQV-------DVVISTVGHTLLG 90
            +  +  DV +  S+ +AI Q+       DV+I   GH + G
Sbjct: 60  DLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFG 101

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          ++L  GG G+IG  IVE  +  G    VL     L+   +  +       GV     D+ 
Sbjct: 2  RVLVTGGAGFIGSHIVEDLLARGLEVAVL---DNLATGKRENVPK-----GVPFFRVDLR 53

Query: 66 NHESLVKAIKQ--VDVVI 81
          + E + +A ++     V 
Sbjct: 54 DKEGVERAFREFRPTHVS 71

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.95
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.95
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.93
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.93
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.92
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.91
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.9
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.89
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.89
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.88
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.88
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.88
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.88
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.87
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.87
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.87
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.87
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.87
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.87
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.87
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.87
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.87
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.87
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.87
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.87
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.87
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.87
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.86
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.86
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.86
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.86
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.86
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.86
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.86
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.86
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.86
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.86
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.86
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.86
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.86
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.86
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.86
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.85
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.85
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.85
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.85
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.85
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.85
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.85
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.85
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.85
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.85
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.85
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.85
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.85
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.85
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.85
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.85
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.85
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.84
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.84
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.84
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.84
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.84
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.84
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.84
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.84
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.84
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.84
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.84
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.84
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.84
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.84
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.84
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.84
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.84
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.84
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.83
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.83
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.83
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.83
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.83
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.83
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.83
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.83
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.83
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.83
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.83
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.83
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.83
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.83
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.83
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.83
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.83
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.83
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.83
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.83
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.82
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.82
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.82
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.82
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.82
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.82
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.82
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.82
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.82
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.82
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.82
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.82
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.82
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.82
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.82
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.82
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.82
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.82
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.82
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.81
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.81
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.81
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.81
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.81
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.81
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.81
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.81
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.81
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.81
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.81
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.81
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.81
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.81
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.81
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.81
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.81
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.8
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.8
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.8
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.8
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.8
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.8
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.8
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.8
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.8
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.8
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.8
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.8
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.8
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.8
1spx_A	278	Short-chain reductase family member (5L265); paral	99.8
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.79
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.79
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.79
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.79
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.79
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.79
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.79
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.79
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.79
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.79
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.79
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.79
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.78
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.78
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.78
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.78
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.78
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.78
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.78
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.78
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.78
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.78
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.78
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.78
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.78
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.78
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.78
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.78
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.78
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.78
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.78
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.78
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.78
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.78
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.78
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.78
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.78
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.78
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.78
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.78
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.78
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.78
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.78
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.77
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.77
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.77
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.77
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.77
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.77
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.77
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.77
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.77
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.77
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.77
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.77
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.76
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.76
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.76
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.76
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.76
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.76
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.76
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.76
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.76
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.76
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.76
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.76
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.76
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.76
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.76
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.76
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.75
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.75
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.75
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.75
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.75
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.75
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.75
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.75
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.75
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.75
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.75
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.74
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.74
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.74
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.74
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.74
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.74
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.74
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.74
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.74
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.73
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.73
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.73
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.73
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.73
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.72
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.72
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.72
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.71
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.71
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.71
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.71
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.71
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.71
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.7
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.7
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.7
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.7
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.69
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.68
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.68
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.67
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.67
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.66
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.64
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.64
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.6
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.57
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.56
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.56
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.55
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.55
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.54
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.53
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.52
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.51
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.45
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.45
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.41
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.39
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.37
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.17
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.12
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.06
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.04
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	99.03
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.0
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.99
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.91
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.83
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.82
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.8
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.8
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.78
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.75
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.65
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.62
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.53
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.47
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.43
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.43
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.38
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.37
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.33
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.32
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.31
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.24
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.21
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.18
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.14
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.13
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.12
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.09
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.08
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.06
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.05
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.04
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.04
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.01
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.0
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.99
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.98
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.96
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.96
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.95
1lnq_A	336	MTHK channels, potassium channel related protein;	97.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.93
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.92
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.91
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.88
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.88
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.88
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.87
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.86
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.86
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.84
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.84
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.83
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.82
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.82
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.81
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.81
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.8
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.8
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.76
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.75
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.71
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.71
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.67
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.67
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.66
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.65
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.64
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.63
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.62
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.62
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.61
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.59
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.58
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.57
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.55
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.54
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.53
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.53
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.53
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.48
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.48
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.46
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.45
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.45
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.44
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.44
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.43
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.42
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.41
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.41
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.4
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.4
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.38
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.38
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.38
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.37
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.36
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.36
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.34
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.34
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.34
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.34
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.33
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.33
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.31
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.31
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.3
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.3
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.3
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.3
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.3
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.3
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.29
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.28
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.28
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.28
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.28
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.27
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.27
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.26
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.26
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.25
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.24
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.24
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.23
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.22
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	97.22
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.22
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.22
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.21
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.2
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.19
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.19
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.18
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.18
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.18
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.17
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.17
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.17
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.17
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.16
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.14
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.14
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.14
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.14
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.14
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.14
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.13
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.12
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.1
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.09
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.09
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.09
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.09
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.09
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.09
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.09
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.07
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.04
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.03
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.02
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.02
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.97
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	96.95
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	96.95
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.94
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.93
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.93
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.93
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.92
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.92
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.91
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.91
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.9
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.9
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.9
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.9

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.95  E-value=7.5e-29  Score=199.53  Aligned_cols=202  Identities=17%  Similarity=0.201  Sum_probs=146.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   78 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+..     +   .....++..+.+|++|+++++++++   ++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~-----~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD   80 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV-----H---APRHPRIRREELDITDSQRLQRLFEALPRLD   80 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST-----T---SCCCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----h---hhhcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999999985432     1   1224578889999999999988775   799


Q ss_pred             EEEEcCCCccchh--HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCch
Q 044721           79 VVISTVGHTLLGD--QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHG  156 (263)
Q Consensus        79 ~vv~~a~~~~~~~--~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~  156 (263)
                      ++|||||......  ...-.+...+                     .|....+..+|.... ++++.+     |+++|++
T Consensus        81 iLVNNAGi~~~~~~~~~~~w~~~~~---------------------vNl~g~~~~~~~~~p-~m~~~~-----G~IVnis  133 (242)
T 4b79_A           81 VLVNNAGISRDREEYDLATFERVLR---------------------LNLSAAMLASQLARP-LLAQRG-----GSILNIA  133 (242)
T ss_dssp             EEEECCCCCCGGGGGSHHHHHHHHH---------------------HHTHHHHHHHHHHHH-HHHHHC-----EEEEEEC
T ss_pred             EEEECCCCCCCcccCCHHHHHHHHH---------------------HhhHHHHHHHHHHHH-HHHHcC-----CeEEEEe
Confidence            9999999764111  1111222222                     222455677887665 555554     8999988


Q ss_pred             hHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCCee
Q 044721          157 SLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYT  236 (263)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      |..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+....+       
T Consensus       134 S~~-------------~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~-------  193 (242)
T 4b79_A          134 SMY-------------STFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVE-------  193 (242)
T ss_dssp             CGG-------------GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHH-------
T ss_pred             ecc-------------ccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHH-------
Confidence            887             566667788999999999999999999999999999999999887765332210000       


Q ss_pred             EEecccccccccCCCCCCCCCCC
Q 044721          237 YVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       .........|++|+++|+|+|.
T Consensus       194 -~~~~~~~~~PlgR~g~peeiA~  215 (242)
T 4b79_A          194 -ATRRIMQRTPLARWGEAPEVAS  215 (242)
T ss_dssp             -HHHHHHHTCTTCSCBCHHHHHH
T ss_pred             -HHHHHHhcCCCCCCcCHHHHHH
Confidence             0011233468899999999864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.95  E-value=8.7e-29  Score=199.58  Aligned_cols=207  Identities=14%  Similarity=0.136  Sum_probs=155.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+..   ++..+.+... +.++..+.+|++|+++++++++  ++|++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---DETLDIIAKD-GGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHHT-TCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999999999842   1222222322 4578899999999998888775  79999


Q ss_pred             EEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCch
Q 044721           81 ISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHG  156 (263)
Q Consensus        81 v~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~  156 (263)
                      |||||......    +..-.+...+                     +|....++.+|..+..++++..    .|+++|++
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~---------------------vNl~g~f~~~~~~~~~m~~~g~----~G~IVnis  138 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMD---------------------VNLKALFFTTQAFAKELLAKGR----SGKVVNIA  138 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHH---------------------HHTHHHHHHHHHHHHHHHHHTC----CEEEEEEC
T ss_pred             EECCCCCCCCCcccccHHHHHHHHH---------------------HHhHHHHHHHHHHHHHHHHhCC----CcEEEEEe
Confidence            99999764221    1112222222                     2225567889999999887753    38999988


Q ss_pred             hHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCCee
Q 044721          157 SLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYT  236 (263)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      |..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+.......     
T Consensus       139 S~~-------------~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~-----  200 (247)
T 4hp8_A          139 SLL-------------SFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARN-----  200 (247)
T ss_dssp             CGG-------------GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHH-----
T ss_pred             chh-------------hCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHH-----
Confidence            877             55666777899999999999999999999999999999999998887655432111000     


Q ss_pred             EEecccccccccCCCCCCCCCCC
Q 044721          237 YVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                         .......|++|+++|+|+|.
T Consensus       201 ---~~~~~~~PlgR~g~peeiA~  220 (247)
T 4hp8_A          201 ---KAILERIPAGRWGHSEDIAG  220 (247)
T ss_dssp             ---HHHHTTCTTSSCBCTHHHHH
T ss_pred             ---HHHHhCCCCCCCcCHHHHHH
Confidence               11234568999999999874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.94  E-value=1.1e-28  Score=200.67  Aligned_cols=206  Identities=14%  Similarity=0.126  Sum_probs=154.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+     +++.+ ..+++.  +.++..+++|++|+++++++++    
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~-----~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR-----ATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999998     43332 222322  4568889999999999988775    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||......    ..+-++...+.                     |....+..+|..+..++++.+    
T Consensus        83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~~~----  137 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDT---------------------NLTSAFLVSRSAAKRMIARNS----  137 (255)
T ss_dssp             TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC----
T ss_pred             HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHHHccC----
Confidence               6899999999765221    12222222222                     224567789999998887644    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      .|+++|++|..             +..+..+...|.++|.+...++|.++.||++++||||+|+||+..++........ 
T Consensus       138 ~G~IVnisS~~-------------~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-  203 (255)
T 4g81_D          138 GGKIINIGSLT-------------SQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED-  203 (255)
T ss_dssp             CEEEEEECCGG-------------GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC-
T ss_pred             CCEEEEEeehh-------------hcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC-
Confidence            48999888877             5666778889999999999999999999999999999999999887765433210 


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                        +.     .........|++|+++|+|+|.
T Consensus       204 --~~-----~~~~~~~~~Pl~R~g~pediA~  227 (255)
T 4g81_D          204 --KQ-----FDSWVKSSTPSQRWGRPEELIG  227 (255)
T ss_dssp             --HH-----HHHHHHHHSTTCSCBCGGGGHH
T ss_pred             --HH-----HHHHHHhCCCCCCCcCHHHHHH
Confidence              00     0001123468899999999874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.94  E-value=3e-27  Score=192.17  Aligned_cols=174  Identities=14%  Similarity=0.130  Sum_probs=137.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+ ..+++.  +.++..+++|++|+++++++++   
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~-----~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL-----EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998     44433 222332  4568889999999999988775   


Q ss_pred             ----CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ----QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                          ++|++|||||....     +...+-++...+.+                     ....++.+|..+..|.++.+  
T Consensus        80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vN---------------------l~g~~~~~~~~~p~m~~~~~--  136 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVN---------------------LYSAFYSSRAVIPIMLKQGK--  136 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcCC--
Confidence                79999999996531     11122233332222                     24567789999998888765  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                         |+++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++
T Consensus       137 ---G~IVnisS~~-------------g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~  193 (254)
T 4fn4_A          137 ---GVIVNTASIA-------------GIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN  193 (254)
T ss_dssp             ---EEEEEECCGG-------------GTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             ---cEEEEEechh-------------hcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence               9999988877             55566677899999999999999999999999999999999987654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.94  E-value=3.3e-27  Score=191.11  Aligned_cols=195  Identities=15%  Similarity=0.128  Sum_probs=144.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      +|+++||||+++||+++++.|+++|++|++++|+     +++.+.+... ..++..+++|++|+++++++++       +
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID-----EKRSADFAKE-RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHTT-CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHh-cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4899999999999999999999999999999998     4444322222 3568889999999999888765       7


Q ss_pred             cCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           77 VDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                      +|++|||||......    ...-.+...+.                     |....|..+|.....+.+. +     |++
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~~~m~~~-~-----G~I  128 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSV---------------------GLKAPYELSRLCRDELIKN-K-----GRI  128 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHT-T-----CEE
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHhhc-C-----CcE
Confidence            999999999765221    11122222222                     2245677788887776654 3     677


Q ss_pred             cCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcC
Q 044721          153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEG  232 (263)
Q Consensus       153 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~  232 (263)
                      +|++|..             +..+..+...|.++|++...++|.++.||++ +||||+|+||+..++.......      
T Consensus       129 InisS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~------  188 (247)
T 3ged_A          129 INIASTR-------------AFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ------  188 (247)
T ss_dssp             EEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH------
T ss_pred             EEEeecc-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH------
Confidence            7877766             5556677889999999999999999999997 8999999999887765432211      


Q ss_pred             CCeeEEecccccccccCCCCCCCCCCC
Q 044721          233 IPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                              ......+++|+++|+|+|.
T Consensus       189 --------~~~~~~Pl~R~g~pediA~  207 (247)
T 3ged_A          189 --------EDCAAIPAGKVGTPKDISN  207 (247)
T ss_dssp             --------HHHHTSTTSSCBCHHHHHH
T ss_pred             --------HHHhcCCCCCCcCHHHHHH
Confidence                    1223468899999998864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.93  E-value=4e-27  Score=192.19  Aligned_cols=211  Identities=15%  Similarity=0.089  Sum_probs=146.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+..  +..+.+.. .+.++..+.+|++|+++++++++      
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--AFLDALAQ-RQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--HHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--HHHHHHHh-cCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999985421  11221222 25678999999999998887765      


Q ss_pred             -CcCEEEEcCCCccc---hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 -QVDVVISTVGHTLL---GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 -~~d~vv~~a~~~~~---~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                       ++|++|||||....   +....-++...+.                     |....+..+|..+..+ ++.+     |+
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~p~m-~~~~-----G~  134 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLER---------------------NLIHYYAMAHYCVPHL-KATR-----GA  134 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHH-HHHT-----CE
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHH-HhcC-----Ce
Confidence             79999999997531   1111222222222                     2245677788887765 4443     78


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++............
T Consensus       135 IVnisS~~-------------~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~  201 (258)
T 4gkb_A          135 IVNISSKT-------------AVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDP  201 (258)
T ss_dssp             EEEECCTH-------------HHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC----------
T ss_pred             EEEEeehh-------------hccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccCh
Confidence            88888777             44455667889999999999999999999999999999999988776644322211111


Q ss_pred             CCCeeEEecccccccccC-CCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGYFLP-NLSQPGATAP  259 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~-~~~~~~e~~~  259 (263)
                      +    ..........+++ |+++|+|+|.
T Consensus       202 ~----~~~~~~~~~~plg~R~g~peeiA~  226 (258)
T 4gkb_A          202 E----AKLAEIAAKVPLGRRFTTPDEIAD  226 (258)
T ss_dssp             -----CHHHHHHTTCTTTTSCBCHHHHHH
T ss_pred             H----HHHHHHHhcCCCCCCCcCHHHHHH
Confidence            0    0011233445674 8999998864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.93  E-value=1.1e-27  Score=196.46  Aligned_cols=205  Identities=15%  Similarity=0.133  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+     .++++. .+++ +.++..+++|++|+++++++++      
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~-----~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR-----KDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999     545443 3333 5678899999999999888775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.+                     ....++.+|..+..+ ++      .|
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vN---------------------l~g~~~~~~~~~p~m-~~------~G  153 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRN---------------------VKGVLFTVQKALPLL-AR------GS  153 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHH---------------------THHHHHHHHHHTTTE-EE------EE
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHH---------------------hHHHHHHHHHHHHHH-hh------CC
Confidence             6899999999764211    112222222222                     234566677665543 22      47


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH--H
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA--V  228 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~--~  228 (263)
                      +++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++........  .
T Consensus       154 ~IInisS~~-------------~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~  220 (273)
T 4fgs_A          154 SVVLTGSTA-------------GSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPV  220 (273)
T ss_dssp             EEEEECCGG-------------GGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHH
T ss_pred             eEEEEeehh-------------hccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCch
Confidence            787777666             5556667788999999999999999999999999999999998876543322110  0


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      +.++     +........|++|+++|+|+|.
T Consensus       221 ~~~~-----~~~~~~~~~PlgR~g~peeiA~  246 (273)
T 4fgs_A          221 QQQG-----LLNALAAQVPMGRVGRAEEVAA  246 (273)
T ss_dssp             HHHH-----HHHHHHHHSTTSSCBCHHHHHH
T ss_pred             hhHH-----HHHHHHhcCCCCCCcCHHHHHH
Confidence            0000     0111233468999999999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.92  E-value=3.5e-26  Score=187.14  Aligned_cols=206  Identities=15%  Similarity=0.098  Sum_probs=147.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+....            ..+...+++|++|+++++++++       
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999984311            1233468899999998887765       


Q ss_pred             CcCEEEEcCCCccc------hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 QVDVVISTVGHTLL------GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 ~~d~vv~~a~~~~~------~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                      ++|++|||||....      +....-++...+.                     |....+..+|..+..+.++.+     
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~~~-----  131 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSL---------------------NLFAAVRLDRQLVPDMVARGS-----  131 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHH---------------------HhHHHHHHHHhhchhhhhcCC-----
Confidence            69999999996431      1111112222222                     224567778888888877764     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccc-hhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH-
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLL-ADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA-  227 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~-  227 (263)
                      |+++|++|..             +..+. .+...|.++|++...++|.++.||++++||||+|+||+..++........ 
T Consensus       132 G~Iv~isS~~-------------~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~  198 (261)
T 4h15_A          132 GVVVHVTSIQ-------------RVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERL  198 (261)
T ss_dssp             EEEEEECCGG-------------GTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHH
T ss_pred             ceEEEEEehh-------------hccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHH
Confidence            8888877765             33333 35678889999988899999999999999999999999888765544333 


Q ss_pred             HHHcCCCee---EEecccccccccCCCCCCCCCCC
Q 044721          228 VEAEGIPYT---YVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .+..+....   ..........|++|+++|+|+|.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~  233 (261)
T 4h15_A          199 AKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVAN  233 (261)
T ss_dssp             HHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHH
T ss_pred             HHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            222222211   11122344578999999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.91  E-value=3.2e-26  Score=187.51  Aligned_cols=207  Identities=12%  Similarity=0.115  Sum_probs=136.6

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+|  +||+++++.|+++|++|++++|+.... .+..+.+++..+.++..+++|++|+++++++++     
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR-KELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999876  999999999999999999999984221 111222333334578899999999998887765     


Q ss_pred             --CcCEEEEcCCCccchhH--------HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 --QVDVVISTVGHTLLGDQ--------VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~~--------~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                        ++|++|||||.......        ..-+....+.                     +....+..++.... +++ .  
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~v---------------------n~~~~~~~~~~~~~-~~~-~--  138 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDI---------------------SSYSLTIVAHEAKK-LMP-E--  138 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHT-TCT-T--
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHH---------------------HHHHHHHHHHHHHH-Hhc-c--
Confidence              79999999997642210        0101111111                     11122223333221 111 1  


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHH
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIR  225 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~  225 (263)
                         -|+++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++......
T Consensus       139 ---~G~IVnisS~~-------------~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          139 ---GGSIVATTYLG-------------GEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             ---CEEEEEEECGG-------------GTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             ---CCEEEEEeccc-------------cccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc
Confidence               27777777665             55666778889999999988999999999999999999999987765432110


Q ss_pred             HHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          226 RAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..-+        .........|++|+++|+|+|.
T Consensus       203 ~~~~--------~~~~~~~~~Pl~R~g~peevA~  228 (256)
T 4fs3_A          203 GFNT--------ILKEIKERAPLKRNVDQVEVGK  228 (256)
T ss_dssp             THHH--------HHHHHHHHSTTSSCCCHHHHHH
T ss_pred             CCHH--------HHHHHHhcCCCCCCcCHHHHHH
Confidence            0000        0001122357899999998764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.91  E-value=1.7e-23  Score=178.62  Aligned_cols=151  Identities=40%  Similarity=0.727  Sum_probs=130.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      ++|+|+||||||+||+++++.|++.|++|++++|++... +.+.+.+..+...++.++.+|++|++++.++++  ++|+|
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC-HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC-hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            457899999999999999999999999999999985321 344444445556789999999999999999999  99999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ||+++...+..+.++++++.+.++++++++|+||...++..+..|...|+.+|..+|+++++.+++|++.|..+
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~  161 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNS  161 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCE
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEecc
Confidence            99999988889999999999987689999999998766666777788999999999999999999999998544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.90  E-value=1.2e-22  Score=170.34  Aligned_cols=155  Identities=63%  Similarity=0.957  Sum_probs=124.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-CcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-APSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |.++|+|+||||||+||+++++.|+++|++|++++|+.... .+++.+.+..+...+++++.+|++|++++.++++++|+
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~   80 (308)
T 1qyc_A            1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV   80 (308)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCE
Confidence            55578999999999999999999999999999999986432 12233333344456799999999999999999999999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      |||+++...+....++++++.+.++++++|+|++|...++..+..|...++.+|..+|+++++.+++|++.|...+
T Consensus        81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~  156 (308)
T 1qyc_A           81 VISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCF  156 (308)
T ss_dssp             EEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred             EEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEecee
Confidence            9999998777788999999999864899998988865544334444333449999999999999999999886544

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.89  E-value=3e-22  Score=168.31  Aligned_cols=155  Identities=52%  Similarity=0.787  Sum_probs=122.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |.++|+|+||||||+||+++++.|+++|++|++++|+.+...+++.+.+..+...+++++.+|++|++++.++++++|+|
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~v   80 (313)
T 1qyd_A            1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVV   80 (313)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence            55578999999999999999999999999999999986432122333333333567899999999999999999999999


Q ss_pred             EEcCCCc----cchhHHHHHHHHHHhCCcceeeeccccCCCCc-cccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           81 ISTVGHT----LLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR-VHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        81 v~~a~~~----~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~-~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ||+++..    .+..+.++++++.+.++++++|+|+++...++ ..+..|...++.+|..+|+++++.+++|++.|...+
T Consensus        81 i~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp~~~  160 (313)
T 1qyd_A           81 ISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMF  160 (313)
T ss_dssp             EECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEE
T ss_pred             EECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEecee
Confidence            9999976    46678999999999864789998888854432 222334334449999999999999999999986544

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.89  E-value=1.3e-23  Score=172.44  Aligned_cols=214  Identities=14%  Similarity=0.064  Sum_probs=130.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+     .++.+........++..+++|++|+++++++++       
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADID-----IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998     444432222224578899999999999988876       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|+||||||......    ...-++...+.+                     ....+...+.....+.++..    .|+
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~~----~g~  136 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAIN---------------------VAGTLFTLQAAARQMIAQGR----GGK  136 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTS----CEE
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC----CeE
Confidence            8999999999753111    011111111111                     12233344444444444321    144


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++|+++..             +..+......|..+|.+...+++.++.++++.+++||+|+||....+............
T Consensus       137 iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~  203 (259)
T 4e6p_A          137 IINMASQA-------------GRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARY  203 (259)
T ss_dssp             EEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHH
T ss_pred             EEEECChh-------------hccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhh
Confidence            44444333             22223334455555555555777788899999999999999988776654432222111


Q ss_pred             -CCCeeEEecccccccccCCCCCCCCCCC
Q 044721          232 -GIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       232 -~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       ...............+++|+++|+|+|.
T Consensus       204 ~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          204 ENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             ccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence             1000000011223356788888888753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.88  E-value=4.5e-24  Score=173.82  Aligned_cols=177  Identities=18%  Similarity=0.153  Sum_probs=117.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh--ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF--KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+.    .++.+. .+.+  .+.++..+++|++|+++++++++  
T Consensus         1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   76 (246)
T 3osu_A            1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS----KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEV   76 (246)
T ss_dssp             CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            78889999999999999999999999999999988863    222221 1222  13568889999999999888876  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||......    ...-.+...+.+                     ....+..++.....+.++..  
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~~--  133 (246)
T 3osu_A           77 VSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTN---------------------LKGVFNCIQKATPQMLRQRS--  133 (246)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcCC--
Confidence                 7999999999763110    011111111111                     12234445555544444432  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                         |+++|++|....             .+..+...|..+|.+...+++.++.+++++++++|+|+||...++.
T Consensus       134 ---g~iv~isS~~~~-------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (246)
T 3osu_A          134 ---GAIINLSSVVGA-------------VGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM  191 (246)
T ss_dssp             ---EEEEEECCHHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred             ---CEEEEEcchhhc-------------CCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCc
Confidence               555555554422             1222344566666666667788888999999999999999876653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.88  E-value=1.3e-21  Score=163.94  Aligned_cols=150  Identities=59%  Similarity=0.907  Sum_probs=121.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC-CCCCc-chhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES-TLSAP-SKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ||+|+||||||+||+++++.|+++|++|++++|++ ....+ ++.+.+..+...+++++.+|++|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999985 21111 33333333334678999999999999999999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCC-chHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPA-KSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~-~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      |+++...+....++++++.+.++++++|+|++|...++..+..|. ..| .+|..+|+++++.+++|++.|...
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~~~~lrp~~  154 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAEGVPYTYLCCHA  154 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCE
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHH-HHHHHHHHHHHHcCCCeEEEEcce
Confidence            999988788889999999988547999988888654443333442 345 999999999999999999988543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.88  E-value=1.1e-23  Score=171.69  Aligned_cols=174  Identities=22%  Similarity=0.169  Sum_probs=123.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......+...+++|++|+++++++++       
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998     444433222223457889999999999988876       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||||......    ...-++...+.+                     ....+..++.....+.++.+     |+
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~m~~~~~-----g~  136 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETN---------------------LTSIFRLSKAVLRGMMKKRQ-----GR  136 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----EE
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcCC-----CE
Confidence            7999999999764211    111111111111                     13345556666666655543     67


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++|++|....             .+..+...|..+|.+...+++.++.++++++++||+|+||+..++.
T Consensus       137 iv~isS~~~~-------------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  192 (248)
T 3op4_A          137 IINVGSVVGT-------------MGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM  192 (248)
T ss_dssp             EEEECCHHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred             EEEEcchhhc-------------CCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence            7776665532             2334556777788777778899999999999999999999876654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.88  E-value=1.2e-21  Score=165.17  Aligned_cols=148  Identities=50%  Similarity=0.804  Sum_probs=119.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +++|+||||||+||+++++.|+++|++|++++|++..    +.+.+..+...+++++.+|++|++++.++++++|+|||+
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~   86 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISA   86 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS----CHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc----hhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            3589999999999999999999999999999998531    222222333467899999999999999999999999999


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ++...+..++++++++.+.++++++|+|++|...++..+..|...++.+|..+|+++++.+++|++.|...+
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~  158 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCF  158 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEccee
Confidence            998777788999999998854789998888865443333233223349999999999999999999886544

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.88  E-value=2.9e-23  Score=170.93  Aligned_cols=174  Identities=18%  Similarity=0.139  Sum_probs=119.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+....+.++..+.+|++|+++++++++       
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-----EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREME  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998     444433222225678899999999999888776       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|+||||||......    ...-.+...+.+                     ....+..++..+..+.++..     |+
T Consensus       101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~-----g~  154 (266)
T 3grp_A          101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVN---------------------LTAASTLTRELIHSMMRRRY-----GR  154 (266)
T ss_dssp             SCCEEEECCCCC-----CCCHHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----EE
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHcCC-----cE
Confidence            7999999999764111    111111111111                     13344556666665555442     56


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++|++|..             +..+..+...|..+|.+...+++.++.+|++.+++||+|+||...++.
T Consensus       155 Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~  210 (266)
T 3grp_A          155 IINITSIV-------------GVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM  210 (266)
T ss_dssp             EEEECCC--------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             EEEECCHH-------------HcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence            66655544             222334556777777777778888999999999999999999877654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.87  E-value=1.2e-23  Score=174.45  Aligned_cols=215  Identities=18%  Similarity=0.186  Sum_probs=124.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+.  +.++..+.+|++|+++++++++  
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD-----AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAA   95 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            5678999999999999999999999999999999998     43333 222222  3568899999999999888775  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHH--HHHHcC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRR--AVEAEG  144 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~--~~~~~~  144 (263)
                           ++|+||||||......    ...-++...+.+                     ....+..++..+..  +.++. 
T Consensus        96 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~~-  153 (279)
T 3sju_A           96 VERFGPIGILVNSAGRNGGGETADLDDALWADVLDTN---------------------LTGVFRVTREVLRAGGMREAG-  153 (279)
T ss_dssp             HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHSSHHHHT-
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHhchhhHhhcC-
Confidence                 7899999999764110    001111111111                     01223334433331  22222 


Q ss_pred             CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHH
Q 044721          145 IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKI  224 (263)
Q Consensus       145 ~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~  224 (263)
                          .|+++|++|..             +..+......|..+|.+...+++.++.++++.+++||+|+||...++.....
T Consensus       154 ----~g~iV~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  216 (279)
T 3sju_A          154 ----WGRIVNIASTG-------------GKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERV  216 (279)
T ss_dssp             ----CEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHH
T ss_pred             ----CcEEEEECChh-------------hccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHH
Confidence                14444443333             2222333445555555555577778889999999999999998877654332


Q ss_pred             HHHHHH-cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          225 RRAVEA-EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       225 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ...... .+..............+++|+.+|+|+|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  252 (279)
T 3sju_A          217 REGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAG  252 (279)
T ss_dssp             HHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred             HhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            210000 00000000111223456778888877653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=7.8e-22  Score=158.34  Aligned_cols=145  Identities=21%  Similarity=0.277  Sum_probs=115.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |.+||+|+||||||+||+++++.|+++|++|++++|++.     +.+   .+ ..++.++.+|++|++++.++++++|+|
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~---~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v   71 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE-----KIK---IE-NEHLKVKKADVSSLDEVCEVCKGADAV   71 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG-----GCC---CC-CTTEEEECCCTTCHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc-----cch---hc-cCceEEEEecCCCHHHHHHHhcCCCEE
Confidence            666789999999999999999999999999999999943     221   11 257899999999999999999999999


Q ss_pred             EEcCCCcc---------chhHHHHHHHHHHhCCcceeee-ccccCCC------CccccCCCCchHHHHHHHHHHHHH---
Q 044721           81 ISTVGHTL---------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDV------DRVHAVEPAKSAFATKAKIRRAVE---  141 (263)
Q Consensus        81 v~~a~~~~---------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~------~~~~~~~~~~~~~~~k~~~e~~~~---  141 (263)
                      ||+||...         +..+.++++++.+.+ ++++|+ |+.+...      .++.+..|...|..+|...|.+++   
T Consensus        72 i~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  150 (227)
T 3dhn_A           72 ISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLM  150 (227)
T ss_dssp             EECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGG
T ss_pred             EEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence            99998762         566889999999999 998885 6544321      223455667889999999996663   


Q ss_pred             -HcCCCEEEEeccCc
Q 044721          142 -AEGIPYTYGDVLNH  155 (263)
Q Consensus       142 -~~~~~~~~gr~~n~  155 (263)
                       +.++++++.|..++
T Consensus       151 ~~~~~~~~ilrp~~v  165 (227)
T 3dhn_A          151 KEKEIDWVFFSPAAD  165 (227)
T ss_dssp             GCCSSEEEEEECCSE
T ss_pred             hccCccEEEEeCCcc
Confidence             45889998887764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.87  E-value=1.3e-21  Score=165.05  Aligned_cols=152  Identities=45%  Similarity=0.772  Sum_probs=120.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC-CCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES-TLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++|+|+||||||+||+++++.|+++|++|++++|++ +...+.+.+.+..+...+++++.+|++|++++.++++++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            457899999999999999999999999999999985 3211223333333335679999999999999999999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCC-CchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEP-AKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~-~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      |+++...+..++++++++.+.++++++|+|++|...++..+..| ...| .+|..+|+++++.+++|++.|...+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~  156 (321)
T 3c1o_A           83 SALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEAAALPYTYVSANCF  156 (321)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred             ECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHH-HHHHHHHHHHHHcCCCeEEEEecee
Confidence            99998777788999999998854789998888864443222223 2346 9999999999999999999985544

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.87  E-value=3.9e-24  Score=176.04  Aligned_cols=212  Identities=16%  Similarity=0.102  Sum_probs=123.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh----ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF----KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~----~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+    ...++..+.+|++|+++++++++  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD-----GERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999998     433321 1222    12348889999999999887765  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||......    ...-++...+.+                     ....+..++.....+.++.+  
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~~--  138 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLK---------------------FFSVIHPVRAFLPQLESRAD--  138 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHTTSTT--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHhhccCC--
Confidence                 7899999999754110    000011111111                     01122233333333222211  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|++|..             +..+......|..+|.+...+++.++.+|++++|+||+|+||+..++.......
T Consensus       139 ---g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~  202 (265)
T 3lf2_A          139 ---AAIVCVNSLL-------------ASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFE  202 (265)
T ss_dssp             ---EEEEEEEEGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHT
T ss_pred             ---eEEEEECCcc-------------cCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhh
Confidence               3343333332             222233344555555555557777888999999999999999887765433211


Q ss_pred             HHHHcCCCeeEEecccc---cccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFF---AGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~~  259 (263)
                      ........+... ....   ...+++|+++|+|+|.
T Consensus       203 ~~~~~~~~~~~~-~~~~~~~~~~p~~r~~~pedvA~  237 (265)
T 3lf2_A          203 AREERELDWAQW-TAQLARNKQIPLGRLGKPIEAAR  237 (265)
T ss_dssp             C------CHHHH-HHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             hhhhhccCHHHH-HHHHhhccCCCcCCCcCHHHHHH
Confidence            000000010000 0011   1257788888888763

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.87  E-value=2.9e-23  Score=171.33  Aligned_cols=205  Identities=16%  Similarity=0.176  Sum_probs=129.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+++.  +.++..+.+|++|+++++++++    
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD-----PSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     43332 222221  3568889999999999988876    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.+    
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~----  154 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTN---------------------LTSAFMIGREAAKRMIPRGY----  154 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC----
Confidence               7999999999753111    111111111111                     12234445554444444332    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                       |+++|+++..             +..+......|..+|.+...+++.++.+|++++|++|+|+||...++........-
T Consensus       155 -g~iV~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~  220 (271)
T 4ibo_A          155 -GKIVNIGSLT-------------SELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP  220 (271)
T ss_dssp             -EEEEEECCGG-------------GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCH
T ss_pred             -cEEEEEccHH-------------hCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCH
Confidence             4555544433             22233344556666666555778888899999999999999988776544332100


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      +.        ........+++|+++|+|+|.
T Consensus       221 ~~--------~~~~~~~~p~~r~~~pedva~  243 (271)
T 4ibo_A          221 EF--------DAWVKARTPAKRWGKPQELVG  243 (271)
T ss_dssp             HH--------HHHHHHHSTTCSCBCGGGGHH
T ss_pred             HH--------HHHHHhcCCCCCCcCHHHHHH
Confidence            00        001112346678888888753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.87  E-value=6.5e-23  Score=168.26  Aligned_cols=83  Identities=16%  Similarity=0.141  Sum_probs=67.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcch-hh-hhhhhc---cCCcEEEEccCCCHHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK-SQ-LLDHFK---KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+.     ++ .+ ..+.+.   +.++..+.+|++|+++++++++
T Consensus         1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   75 (260)
T 1x1t_A            1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD-----AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC-----HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc-----chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHH
Confidence            67889999999999999999999999999999999983     33 22 112221   3467889999999999888776


Q ss_pred             -------CcCEEEEcCCCcc
Q 044721           76 -------QVDVVISTVGHTL   88 (263)
Q Consensus        76 -------~~d~vv~~a~~~~   88 (263)
                             ++|+||||||...
T Consensus        76 ~~~~~~g~iD~lv~~Ag~~~   95 (260)
T 1x1t_A           76 NAVRQMGRIDILVNNAGIQH   95 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCC
Confidence                   7999999999653

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.87  E-value=3.9e-21  Score=163.42  Aligned_cols=153  Identities=16%  Similarity=0.226  Sum_probs=118.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVD   78 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d   78 (263)
                      |+++|+||||||+||||+++++.|+++|++|++++|+.... ....+.+......++.++.+|++|++++.++++  ++|
T Consensus         2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (341)
T 3enk_A            2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK-REAIARIEKITGKTPAFHETDVSDERALARIFDAHPIT   80 (341)
T ss_dssp             CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC-THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred             CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch-HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence            55678999999999999999999999999999999986443 112222222234578999999999999999998  899


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~  135 (263)
                      +|||+|+...               +..+.++++++.+.+ ++++|+ ||   |+..    .++..+..|.+.|..+|.+
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~  159 (341)
T 3enk_A           81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLM  159 (341)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHH
T ss_pred             EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHH
Confidence            9999999764               334678999999998 888884 54   4322    2444566677899999999


Q ss_pred             HHHHHHHc-----CCCEEEEeccCc
Q 044721          136 IRRAVEAE-----GIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~~~-----~~~~~~gr~~n~  155 (263)
                      +|.+++..     ++++++.|..+.
T Consensus       160 ~e~~~~~~~~~~~~~~~~~lRp~~v  184 (341)
T 3enk_A          160 AEQILRDVEAADPSWRVATLRYFNP  184 (341)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEEECEE
T ss_pred             HHHHHHHHhhcCCCceEEEEeeccc
Confidence            99998642     488888886543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.87  E-value=4.2e-23  Score=170.91  Aligned_cols=174  Identities=18%  Similarity=0.167  Sum_probs=112.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+......+.++..+++|++|+++++++++       
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN-----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999998     444433222235678899999999999888776       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.     .|+
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~-----~g~  154 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVN---------------------VKGIFLCSKYVIPVMRRNG-----GGS  154 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHTTTT-----CEE
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcC-----CcE
Confidence            7999999999753110    001111111111                     0122333443333332222     144


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++|++|..             +..+..+...|..+|.+...+++.++.++++.+++||+|+||...++.
T Consensus       155 iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          155 IINTTSYT-------------ATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             EEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             EEEECchh-------------hCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence            44443332             222233344455555555557777888899999999999999887654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.87  E-value=5.7e-23  Score=170.12  Aligned_cols=209  Identities=14%  Similarity=0.145  Sum_probs=127.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+     .++.+......+.++..+.+|++|+++++++++       
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID-----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998     444432222225678999999999999888775       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.+     |+
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~-----g~  156 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAIN---------------------LRGAWLCTKHAAPRMIERGG-----GA  156 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHTTC-----EE
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC-----cE
Confidence            7899999999764110    011111111111                     02223334444444433322     44


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++|+++..             +..+..+...|..+|.+...+++.++.++++.+|+||+|+||...++........... 
T Consensus       157 Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-  222 (277)
T 3gvc_A          157 IVNLSSLA-------------GQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG-  222 (277)
T ss_dssp             EEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---
T ss_pred             EEEEcchh-------------hccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh-
Confidence            44444433             2223333445555555555577778889999999999999998877654332110000 


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                      ..  ...........+++|+++|+|+|
T Consensus       223 ~~--~~~~~~~~~~~~~~r~~~pedvA  247 (277)
T 3gvc_A          223 AL--GAGGARSMIARLQGRMAAPEEMA  247 (277)
T ss_dssp             ------CCHHHHHHHHHSSCBCHHHHH
T ss_pred             hH--HHHhhhhhhhccccCCCCHHHHH
Confidence            00  00001111145667888887765

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.87  E-value=2e-21  Score=157.06  Aligned_cols=143  Identities=19%  Similarity=0.327  Sum_probs=116.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCc-EEEEccCCCHHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGV-NLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +++|+|+||||||+||+++++.|+++|++|++++|+     +++.+.   +...++ .++.+|++  +++.++++++|+|
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~-----~~~~~~---~~~~~~~~~~~~Dl~--~~~~~~~~~~D~v   88 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN-----EEQGPE---LRERGASDIVVANLE--EDFSHAFASIDAV   88 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGHHH---HHHTTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC-----hHHHHH---HHhCCCceEEEcccH--HHHHHHHcCCCEE
Confidence            457899999999999999999999999999999998     444332   223478 99999999  7788899999999


Q ss_pred             EEcCCCcc-----------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           81 ISTVGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        81 v~~a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                      ||+||...           +..+.++++++.+.+ ++++|+ |+++....+..+ .+...|..+|.++|.+++..+++++
T Consensus        89 i~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~-~~~~~Y~~sK~~~e~~~~~~gi~~~  166 (236)
T 3e8x_A           89 VFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQGP-MNMRHYLVAKRLADDELKRSSLDYT  166 (236)
T ss_dssp             EECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGSC-GGGHHHHHHHHHHHHHHHHSSSEEE
T ss_pred             EECCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCCh-hhhhhHHHHHHHHHHHHHHCCCCEE
Confidence            99999763           455789999999999 999885 887765443222 3467899999999999999999999


Q ss_pred             EEeccCch
Q 044721          149 YGDVLNHG  156 (263)
Q Consensus       149 ~gr~~n~~  156 (263)
                      +.|..++.
T Consensus       167 ~lrpg~v~  174 (236)
T 3e8x_A          167 IVRPGPLS  174 (236)
T ss_dssp             EEEECSEE
T ss_pred             EEeCCccc
Confidence            99877643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.87  E-value=4.7e-21  Score=163.60  Aligned_cols=152  Identities=18%  Similarity=0.154  Sum_probs=119.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc----cCCcEEEEccCCCHHHHHHHhcCc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----KLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |++|+||||||||+||+++++.|+++|++|++++|+.... ......+....    ..++.++.+|++|++++.++++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGH-QYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCc-hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            4578999999999999999999999999999999986432 11111111110    167899999999999999999999


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~  134 (263)
                      |+|||+|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..|.+.|+.+|.
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  180 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKY  180 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHH
Confidence            99999999753               345688999999999 998884 54   4332    245566677889999999


Q ss_pred             HHHHHHH----HcCCCEEEEeccCc
Q 044721          135 KIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       135 ~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      .+|++++    +.++++++.|..++
T Consensus       181 ~~E~~~~~~~~~~g~~~~ilRp~~v  205 (351)
T 3ruf_A          181 VNEIYAQVYARTYGFKTIGLRYFNV  205 (351)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECSE
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeCce
Confidence            9999885    45999999987664

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.87  E-value=4.8e-23  Score=170.96  Aligned_cols=215  Identities=16%  Similarity=0.124  Sum_probs=121.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.    .+..+ ..+.+   ...++..+.+|++|+++++++++  
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA----PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC----HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999853    22222 11222   24568889999999999888776  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|+||||||......    ...-++...+.+                     ....+..++.....+.++..  
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~--  155 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN---------------------LSSSFHTIRGAIPPMKKKGW--  155 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcCC--
Confidence                 7999999999764111    001111111111                     02223334444443333321  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|++|..             +..+......|..+|.+...+++.++.++++++++||+|+||...++.......
T Consensus       156 ---g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~  219 (281)
T 3v2h_A          156 ---GRIINIASAH-------------GLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIP  219 (281)
T ss_dssp             ---EEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------
T ss_pred             ---CEEEEECCcc-------------cccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcc
Confidence               4444443333             122223334455555555557777888899999999999999877665332211


Q ss_pred             -HHHHcCCCeeEE-ecccccccccCCCCCCCCCCC
Q 044721          227 -AVEAEGIPYTYV-ASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       .....+...... ........+++|+++|+|+|.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~  254 (281)
T 3v2h_A          220 DQARTRGITEEQVINEVMLKGQPTKKFITVEQVAS  254 (281)
T ss_dssp             --------------------CCTTCSCBCHHHHHH
T ss_pred             hhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHH
Confidence             111111111111 111223457788888887753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.87  E-value=7.5e-23  Score=168.29  Aligned_cols=212  Identities=16%  Similarity=0.076  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+++|++|+++++++++   
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAART-----VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998     433332 22221  4568899999999999888775   


Q ss_pred             ----CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ----QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                          ++|++|||||....     .....-++...+.+                     ....+..++.....+.+..   
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~---  139 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELT---------------------VFGALRLIQGFTPALEESK---  139 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHTHHHHHHHT---
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcC---
Confidence                78999999987420     00011111111111                     0122333443333332221   


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|+++..             +..+......|..+|.+...+++.++.++++++|+||+|+||+..++.......
T Consensus       140 ---g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~  203 (264)
T 3ucx_A          140 ---GAVVNVNSMV-------------VRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFE  203 (264)
T ss_dssp             ---CEEEEECCGG-------------GGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHH
T ss_pred             ---CEEEEECcch-------------hccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHH
Confidence               3333333332             222233334555555555557777888899999999999999887765444322


Q ss_pred             HH-HHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          227 AV-EAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       227 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                      .. ...+..............+++|+.+|+|+|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  236 (264)
T 3ucx_A          204 HQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVA  236 (264)
T ss_dssp             HHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHH
T ss_pred             hhhhhcCCCHHHHHHHHhccCCcccCCCHHHHH
Confidence            11 111111111111223345778888887765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.87  E-value=2.5e-23  Score=170.96  Aligned_cols=81  Identities=22%  Similarity=0.188  Sum_probs=66.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc---cCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+.   ..++..+++|++|+++++++++   
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS-----TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998     43332 122221   2468899999999999988776   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|++|||||...
T Consensus        84 ~~~g~id~lvnnAg~~~  100 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFP  100 (262)
T ss_dssp             HHHSCCSEEEECCCCCC
T ss_pred             HHhCCCCEEEECCCCCC
Confidence                7999999999753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.87  E-value=3.5e-23  Score=169.50  Aligned_cols=175  Identities=15%  Similarity=0.111  Sum_probs=114.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+.+|++|+++++++++    
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK-----SEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     433322 12221  4568889999999999888776    


Q ss_pred             ---CcCEEEEcCCCccchh---HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 ---QVDVVISTVGHTLLGD---QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~---~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                         ++|++|||||......   ...-.+...+.+                     ....+..++.....+.++.+     
T Consensus        86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~-----  139 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLN---------------------LFSLFRLSQLAAPHMQKAGG-----  139 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHTTC-----
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC-----
Confidence               7999999999754211   011111111111                     12233344444444433322     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                      |+++|+++..             +..+......|..+|.+...+++.++.+++++++++|+|+||+..++..
T Consensus       140 g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  198 (256)
T 3gaf_A          140 GAILNISSMA-------------GENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDAL  198 (256)
T ss_dssp             EEEEEECCGG-------------GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred             cEEEEEcCHH-------------HcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchh
Confidence            4444444433             2223334455566666655577788889999999999999998877654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.86  E-value=3.6e-23  Score=170.63  Aligned_cols=200  Identities=17%  Similarity=0.132  Sum_probs=129.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.    .+..+ ..+.+  .+.++..+.+|++|+++++++++    
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS----AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999853    22222 11222  13568889999999999888776    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.+    
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~----  157 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLN---------------------LGGVFLCSRAAAKIMLKQRS----  157 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcCC----
Confidence               7999999999764111    111111111111                     12334445555555544432    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                       |+++|++|....             .+..+...|..+|.+...+++.++.+++++++++|+|+||...++.......  
T Consensus       158 -g~iv~isS~~~~-------------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--  221 (269)
T 4dmm_A          158 -GRIINIASVVGE-------------MGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA--  221 (269)
T ss_dssp             -CEEEEECCHHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH--
T ss_pred             -cEEEEECchhhc-------------CCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH--
Confidence             555555554422             2223445677777776668888889999999999999999877665332221  


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                                 .......+++|+++|+|+|
T Consensus       222 -----------~~~~~~~p~~r~~~~~dvA  240 (269)
T 4dmm_A          222 -----------EKLLEVIPLGRYGEAAEVA  240 (269)
T ss_dssp             -----------HHHGGGCTTSSCBCHHHHH
T ss_pred             -----------HHHHhcCCCCCCCCHHHHH
Confidence                       0112234567777777654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.86  E-value=6.3e-23  Score=170.25  Aligned_cols=212  Identities=17%  Similarity=0.125  Sum_probs=130.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||++++++|+++|++|++++|+     .++.+.+....+.++..+.+|++|+++++++++      
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS-----AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998     444443333235678899999999998887765      


Q ss_pred             -CcCEEEEcCCCccc---------hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 -QVDVVISTVGHTLL---------GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 -~~d~vv~~a~~~~~---------~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                       ++|++|||||....         +....-++...+.+                     ....+..++.....+.+..  
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~--  134 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVN---------------------VKGYIHAVKACLPALVSSR--  134 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhh---------------------hHHHHHHHHHHHHHHHhcC--
Confidence             68999999997431         11111111111111                     1233444555555544432  


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHH
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIR  225 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~  225 (263)
                          |++++++|..             +..+......|..+|.+...+++.++.++++. |+||+|+||+..++......
T Consensus       135 ----g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~  196 (281)
T 3zv4_A          135 ----GSVVFTISNA-------------GFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSS  196 (281)
T ss_dssp             ----CEEEEECCGG-------------GTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTT
T ss_pred             ----CeEEEEecch-------------hccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccc
Confidence                3444443333             22333444567777777666888888999987 99999999987665321100


Q ss_pred             HHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          226 RAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .....................+++|+++|+|+|.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  230 (281)
T 3zv4_A          197 LGLSEQSISSVPLADMLKSVLPIGRMPALEEYTG  230 (281)
T ss_dssp             CC--------CCHHHHHHHTCTTSSCCCGGGGSH
T ss_pred             cccccccccchhHHHHHHhcCCCCCCCCHHHHHH
Confidence            0000000000000111223457899999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.1e-22  Score=166.56  Aligned_cols=180  Identities=12%  Similarity=0.060  Sum_probs=122.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+.....    +..+.+ ..++.++.+|++|+++++++++       
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAEL-GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999854321    111222 4568899999999999988876       


Q ss_pred             CcCEEEEcCCCccch--------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC-CC
Q 044721           76 QVDVVISTVGHTLLG--------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG-IP  146 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~--------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~-~~  146 (263)
                      ++|++|||||.....        ....-.+...+.+                     ....+..++.....+.++.. .+
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~~~~  139 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVN---------------------LIGTFNMIRLAAEVMSQGEPDAD  139 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHTTSCCCTT
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhccccCC
Confidence            899999999976311        1111122222221                     13445567766665544210 00


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                      -..|+++|++|....             .+......|..+|.+...+++.++.+|++.++++|+|+||...++..
T Consensus       140 ~~~g~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  201 (257)
T 3tpc_A          140 GERGVIVNTASIAAF-------------DGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMM  201 (257)
T ss_dssp             SCCEEEEEECCTHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--
T ss_pred             CCCeEEEEEechhhc-------------cCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhh
Confidence            013777777666532             23345678999999998899999999999999999999998877654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.86  E-value=1.2e-20  Score=148.81  Aligned_cols=143  Identities=22%  Similarity=0.283  Sum_probs=114.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|+|+||||||+||+++++.|+++|++|++++|++.     +.+   .....++.++.+|++|++++.++++++|+|||
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~-----~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   73 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS-----RLP---SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG-----GSC---SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh-----hcc---cccCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            3489999999999999999999999999999999843     221   11135789999999999999999999999999


Q ss_pred             cCCCcc--------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           83 TVGHTL--------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        83 ~a~~~~--------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                      +++...        ...+.++++++.+.+ ++++++ |+.+..........+...|..+|..+|.++++.++++++.|..
T Consensus        74 ~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~  152 (206)
T 1hdo_A           74 LLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPP  152 (206)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred             CccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            999754        345789999999999 998884 6654432211111146789999999999999999999988865


Q ss_pred             C
Q 044721          154 N  154 (263)
Q Consensus       154 n  154 (263)
                      +
T Consensus       153 ~  153 (206)
T 1hdo_A          153 H  153 (206)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.86  E-value=2.9e-22  Score=165.51  Aligned_cols=205  Identities=15%  Similarity=0.157  Sum_probs=123.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     ....+..+.+.  ..++..+.+|++|.++++++.+     
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999976     32222222222  3457889999999998877654     


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|+||||||......    ...-++...+.+                     ....+..++.....+.++..     |
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~-----g  158 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVN---------------------LDAAWVLSRSFGTAMLAHGS-----G  158 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----E
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC-----C
Confidence             7999999999764111    001111111111                     02223334444333333321     4


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|+++..             +..+......|..+|.+...+++.++.++++.+|+||+|+||...++........-+.
T Consensus       159 ~IV~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  225 (273)
T 3uf0_A          159 RIVTIASML-------------SFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDER  225 (273)
T ss_dssp             EEEEECCGG-------------GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHH
T ss_pred             EEEEEcchH-------------hcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHH
Confidence            444433332             1222223344555555554477778888999999999999998877654332110000


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                              ........+++|+++|+|+|.
T Consensus       226 --------~~~~~~~~p~~r~~~pedva~  246 (273)
T 3uf0_A          226 --------AAEITARIPAGRWATPEDMVG  246 (273)
T ss_dssp             --------HHHHHHHSTTSSCBCGGGGHH
T ss_pred             --------HHHHHhcCCCCCCCCHHHHHH
Confidence                    001122346678888888763

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.86  E-value=4.4e-23  Score=169.85  Aligned_cols=205  Identities=17%  Similarity=0.145  Sum_probs=130.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+   .+.++..+++|++|+++++++++   
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRD-----VSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     333321 1222   24578999999999998887775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|+||||||......    ...-++...+.+                     ....+..++.....+.++..   
T Consensus        94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~---  149 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVN---------------------LRAPALLASAVGKAMVAAGE---  149 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTS---
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC---
Confidence                7999999999764111    111111111111                     12334445555555544331   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                       .|+++|+++..             +..+..+...|..+|.+...+++.++.+|++++|+||+|+||...++........
T Consensus       150 -~g~iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~  215 (266)
T 4egf_A          150 -GGAIITVASAA-------------ALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD  215 (266)
T ss_dssp             -CEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS
T ss_pred             -CeEEEEEcchh-------------hccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC
Confidence             14555544443             2233344456666666666688888899999999999999998877654322100


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                      ..        .........+++|+.+|+|+|
T Consensus       216 ~~--------~~~~~~~~~p~~r~~~p~dva  238 (266)
T 4egf_A          216 EA--------KSAPMIARIPLGRFAVPHEVS  238 (266)
T ss_dssp             HH--------HHHHHHTTCTTSSCBCHHHHH
T ss_pred             hH--------HHHHHHhcCCCCCCcCHHHHH
Confidence            00        001122334667777777765

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.86  E-value=2e-22  Score=166.68  Aligned_cols=210  Identities=14%  Similarity=0.107  Sum_probs=125.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..... +..+.+.. .+.++..+.+|++|.++++++++      
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTA-AVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTH-HHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999854321 11111111 24568899999999998888776      


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||||......    ...-++...+.+                     ....+..++..+..+.++.+     |+
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~-----g~  162 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVN---------------------LGSTVDMLQSALPKMVARKW-----GR  162 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----EE
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC-----cE
Confidence            7999999999753110    001111111111                     12233334444444333322     44


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++|++|..             +..+......|..+|.+...+++.++.++++.+|+||+|+||...++............
T Consensus       163 Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  229 (275)
T 4imr_A          163 VVSIGSIN-------------QLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEG  229 (275)
T ss_dssp             EEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHH
T ss_pred             EEEECCHH-------------hCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHH
Confidence            44443332             11122233345555555555777788889999999999999988776543321100000


Q ss_pred             CCCeeEEeccccccc-ccCCCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGY-FLPNLSQPGATAP  259 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~-~~~~~~~~~e~~~  259 (263)
                             ........ +++|+++|+|+|.
T Consensus       230 -------~~~~~~~~~p~~r~~~pedvA~  251 (275)
T 4imr_A          230 -------WDEYVRTLNWMGRAGRPEEMVG  251 (275)
T ss_dssp             -------HHHHHHHHSTTCSCBCGGGGHH
T ss_pred             -------HHHHHhhcCccCCCcCHHHHHH
Confidence                   00111222 6788888888763

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.86  E-value=7.8e-23  Score=168.86  Aligned_cols=177  Identities=14%  Similarity=0.062  Sum_probs=113.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+........++..+++|++|+++++++++       
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR-----LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46889999999999999999999999999999998     444432222224678999999999999988876       


Q ss_pred             CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                      ++|+||||||....     +....-++...+.+                     ....+..++.....+.++..-   .|
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~~~---~g  157 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTN---------------------LTGPFLCTQEAFRVMKAQEPR---GG  157 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHSSSC---CE
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhc---------------------cHHHHHHHHHHHHHHHhCCCC---Cc
Confidence            79999999997531     00111111111111                     122334455544444433200   14


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                      +++|+++..             +..+......|..+|.+...+++.++.+|+..+|++|+|+||...++..
T Consensus       158 ~IV~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  215 (272)
T 4dyv_A          158 RIINNGSIS-------------ATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA  215 (272)
T ss_dssp             EEEEECCSS-------------TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----
T ss_pred             EEEEECchh-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh
Confidence            444433332             2223334455666666655577788889999999999999998776543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.86  E-value=2.1e-22  Score=166.78  Aligned_cols=174  Identities=17%  Similarity=0.186  Sum_probs=120.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ....+   .+.++..+.+|++|+++++++++  
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS-----LPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999998     33322 12222   24578899999999999888776  


Q ss_pred             -----CcCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|+||||||.....    ....-++...+.+                     ....+..++.....+.++.+  
T Consensus       100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~--  156 (277)
T 4fc7_A          100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDID---------------------TSGTFNVSRVLYEKFFRDHG--  156 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHTHHHHC--
T ss_pred             HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcCC--
Confidence                 799999999965311    1111122222211                     12334456665555554443  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                         |+++|+++....             .+......|..+|.+...+++.++.+|++++|+||+|+||+..++
T Consensus       157 ---g~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  213 (277)
T 4fc7_A          157 ---GVIVNITATLGN-------------RGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT  213 (277)
T ss_dssp             ---EEEEEECCSHHH-------------HTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred             ---CEEEEECchhhC-------------CCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence               666665554422             223344567777777777888899999999999999999987654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.86  E-value=6.9e-22  Score=161.62  Aligned_cols=154  Identities=20%  Similarity=0.192  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+ +.++..+.+|++|+++++++++     
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999998     433332 2222 3457889999999999988876     


Q ss_pred             --CcCEEEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|+||||||.....                       .++.+++.+.+.+ .+++|. ||......    ..+...|
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y  151 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG----LALTSSY  151 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTCHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC----CCCchhH
Confidence              799999999965310                       1134555555555 566653 44322111    1124456


Q ss_pred             HHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccc
Q 044721          130 FATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN  209 (263)
Q Consensus       130 ~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn  209 (263)
                      ..+|.+++.                                                      +++.++.++++.++++|
T Consensus       152 ~asK~a~~~------------------------------------------------------~~~~la~e~~~~gi~v~  177 (254)
T 1hdc_A          152 GASKWGVRG------------------------------------------------------LSKLAAVELGTDRIRVN  177 (254)
T ss_dssp             HHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHH------------------------------------------------------HHHHHHHHhhhcCeEEE
Confidence            667776666                                                      45556677888899999


Q ss_pred             cCCCCCcchhc
Q 044721          210 AVEPAKSAFVT  220 (263)
Q Consensus       210 ~v~pg~~~~~~  220 (263)
                      +|+||...++.
T Consensus       178 ~v~Pg~v~t~~  188 (254)
T 1hdc_A          178 SVHPGMTYTPM  188 (254)
T ss_dssp             EEEECSBCCHH
T ss_pred             EEecccCcCcc
Confidence            99999876654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.86  E-value=3e-23  Score=170.97  Aligned_cols=176  Identities=16%  Similarity=0.139  Sum_probs=114.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc----cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~----~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+     .++.+ ..+++.    ...+..+.+|++|+++++++++  
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR-----EENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc
Confidence            46899999999999999999999999999999998     33322 222221    2346788999999999888776  


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.+                     ....+..++..++.+.++.     .|
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~-----~g  137 (267)
T 3t4x_A           84 PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVN---------------------IMSGVRLTRSYLKKMIERK-----EG  137 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHTT-----EE
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhCC-----CC
Confidence             7999999999764111    011111111111                     1223334444444443332     24


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      +++|++|..             +..+......|..+|.+...+++.++.++++.+|+||+|+||...++...
T Consensus       138 ~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  196 (267)
T 3t4x_A          138 RVIFIASEA-------------AIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE  196 (267)
T ss_dssp             EEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHH
T ss_pred             EEEEEcchh-------------hccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHH
Confidence            555444433             22233344556666666555778888899999999999999987776443

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.86  E-value=1.1e-21  Score=162.39  Aligned_cols=205  Identities=16%  Similarity=0.167  Sum_probs=122.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     ++.+. .+.+.  +.++..+++|++|+++++++++    
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS-----DALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999984     33221 12221  3478899999999999988876    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|+||||||......    ...-++...+.+                     ....+..++.....+.++..    
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~m~~~~~----  160 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTN---------------------VTGVFLTAQAAARAMVDQGL----  160 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTS----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHcCC----
Confidence               7999999999764110    001111111111                     02223334443333333221    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      -+++++.++......           ........|..+|.+...+++.++.++++++|+||+|+||...++........ 
T Consensus       161 ~g~iv~isS~~~~~~-----------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-  228 (276)
T 3r1i_A          161 GGTIITTASMSGHII-----------NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY-  228 (276)
T ss_dssp             CEEEEEECCGGGTSC-----------CCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG-
T ss_pred             CcEEEEECchHhccc-----------CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH-
Confidence            023333222221000           00012233444444444466777788999999999999998776543321110 


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                                ...+....+++|+++|+|+|.
T Consensus       229 ----------~~~~~~~~p~~r~~~pedvA~  249 (276)
T 3r1i_A          229 ----------HALWEPKIPLGRMGRPEELTG  249 (276)
T ss_dssp             ----------HHHHGGGSTTSSCBCGGGSHH
T ss_pred             ----------HHHHHhcCCCCCCcCHHHHHH
Confidence                      011233457788889998864

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.86  E-value=1.8e-22  Score=166.58  Aligned_cols=175  Identities=18%  Similarity=0.157  Sum_probs=125.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+  .+.++..+.+|++|+++++++++    
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATT-----EAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     433322 1222  14568889999999999888776    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.+    
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~----  156 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTN---------------------LKAVFRLSRAVLRPMMKARG----  156 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcCC----
Confidence               7999999999764211    111112222111                     13445567776666666543    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                       |+++|++|....             .+..+...|..+|.+...+++.++.+|++.+++||+|+||...++..
T Consensus       157 -g~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  215 (270)
T 3ftp_A          157 -GRIVNITSVVGS-------------AGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMT  215 (270)
T ss_dssp             -EEEEEECCHHHH-------------HCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHH
T ss_pred             -CEEEEECchhhC-------------CCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcch
Confidence             777777666532             23344567888888877788999999999999999999998776543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.86  E-value=4.1e-21  Score=153.45  Aligned_cols=141  Identities=21%  Similarity=0.217  Sum_probs=115.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vv~~   83 (263)
                      |+|+||||+|+||+++++.|+++|++|++++|+..     +.+.     ..++.++.+|++| ++++.++++++|+|||+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE-----QVPQ-----YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG-----GSCC-----CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc-----chhh-----cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            48999999999999999999999999999999942     2211     1578999999999 99999999999999999


Q ss_pred             CCCcc-------chhHHHHHHHHHHhCCcceeee-ccccCCCCcc---ccCCCCchHHHHHHHHHHHH-HHcCCCEEEEe
Q 044721           84 VGHTL-------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRV---HAVEPAKSAFATKAKIRRAV-EAEGIPYTYGD  151 (263)
Q Consensus        84 a~~~~-------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~---~~~~~~~~~~~~k~~~e~~~-~~~~~~~~~gr  151 (263)
                      ||...       +..+.++++++.+.+ ++++|+ |+.+......   .+..+...|..+|.++|+++ +..++++++.|
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilr  149 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQ  149 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEe
Confidence            99763       566899999999999 999885 6544322111   22234678999999999999 78899999999


Q ss_pred             ccCch
Q 044721          152 VLNHG  156 (263)
Q Consensus       152 ~~n~~  156 (263)
                      ..++.
T Consensus       150 p~~v~  154 (219)
T 3dqp_A          150 PGALT  154 (219)
T ss_dssp             ECSEE
T ss_pred             CceEe
Confidence            77653

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.86  E-value=1.1e-22  Score=169.74  Aligned_cols=156  Identities=23%  Similarity=0.149  Sum_probs=106.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc---cCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     ++.+ ..+.+.   ..++..+.+|++|+++++++++   
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP-----RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999984     3322 222222   1468889999999998887765   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hhHHHHHH----HHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GDQVKIIA----AIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~~~~l~~----~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                          ++|+||||||....                   ..+..+++    .+.+.+ ..++|. ||.....   .+.....
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~---~~~~~~~  190 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPV---TGYPGWS  190 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTT---BBCTTCH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhcc---CCCCCCH
Confidence                78999999997531                   11222222    233444 455552 3322110   0011234


Q ss_pred             hHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccc
Q 044721          128 SAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDR  207 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (263)
                      .|..+|.+++.                                                      +++.++.+|++.+|+
T Consensus       191 ~Y~asKaa~~~------------------------------------------------------l~~~la~e~~~~gI~  216 (293)
T 3rih_A          191 HYGASKAAQLG------------------------------------------------------FMRTAAIELAPRGVT  216 (293)
T ss_dssp             HHHHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHHH------------------------------------------------------HHHHHHHHHhhhCeE
Confidence            56666666555                                                      666677889999999


Q ss_pred             cccCCCCCcchhcH
Q 044721          208 VNAVEPAKSAFVTK  221 (263)
Q Consensus       208 vn~v~pg~~~~~~~  221 (263)
                      ||+|+||...++..
T Consensus       217 vn~v~PG~v~t~~~  230 (293)
T 3rih_A          217 VNAILPGNILTEGL  230 (293)
T ss_dssp             EEEEEECSBCCHHH
T ss_pred             EEEEecCCCcCcch
Confidence            99999998776543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.86  E-value=4.5e-22  Score=163.48  Aligned_cols=156  Identities=17%  Similarity=0.147  Sum_probs=108.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc---cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK---KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.   +.++..+.+|++|+++++++++  
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ-----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV   79 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999998     333321 12221   3468889999999999988876  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                           ++|+||||||....                   ..    .+.+++.+.+.+ .+++|. ||......    ..+.
T Consensus        80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~  154 (263)
T 3ai3_A           80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQP----LWYE  154 (263)
T ss_dssp             HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCC----CCCc
Confidence                 79999999996531                   11    123333344455 566653 44322111    1124


Q ss_pred             chHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcc
Q 044721          127 KSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVD  206 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (263)
                      ..|..+|.+++.                                                      +++.++.++++.++
T Consensus       155 ~~Y~~sK~a~~~------------------------------------------------------~~~~la~e~~~~gi  180 (263)
T 3ai3_A          155 PIYNVTKAALMM------------------------------------------------------FSKTLATEVIKDNI  180 (263)
T ss_dssp             HHHHHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTE
T ss_pred             chHHHHHHHHHH------------------------------------------------------HHHHHHHHhhhcCc
Confidence            456667776666                                                      45556677888899


Q ss_pred             ccccCCCCCcchhcH
Q 044721          207 RVNAVEPAKSAFVTK  221 (263)
Q Consensus       207 ~vn~v~pg~~~~~~~  221 (263)
                      ++|+|+||...++..
T Consensus       181 ~v~~v~Pg~v~t~~~  195 (263)
T 3ai3_A          181 RVNCINPGLILTPDW  195 (263)
T ss_dssp             EEEEEEECCBCCHHH
T ss_pred             EEEEEecCcccCcch
Confidence            999999998776543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.86  E-value=1.3e-22  Score=168.28  Aligned_cols=176  Identities=17%  Similarity=0.204  Sum_probs=114.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--c---CCcEEEEccCCCHHHHHHHhc-
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--K---LGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~---~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+ ..+.+.  .   .++.++.+|++|+++++++++ 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN-----PDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999998     33322 222221  1   157889999999999888776 


Q ss_pred             ------CcCEEEEcCCCcc-----chhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC
Q 044721           76 ------QVDVVISTVGHTL-----LGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG  144 (263)
Q Consensus        76 ------~~d~vv~~a~~~~-----~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~  144 (263)
                            ++|++|||||...     ......-++...+.+                     ....+..++.....+.++.+
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~~  143 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLN---------------------VNGTMYVLKHAAREMVRGGG  143 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHhcCC
Confidence                  6899999999722     010111111111111                     02233444544444444332


Q ss_pred             CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          145 IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       145 ~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                           |+++|++|....             .+......|..+|.+...+++.++.++++++|+||+|+||...++...
T Consensus       144 -----g~iv~isS~~~~-------------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  203 (281)
T 3svt_A          144 -----GSFVGISSIAAS-------------NTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVA  203 (281)
T ss_dssp             -----EEEEEECCHHHH-------------SCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred             -----cEEEEEeCHHHc-------------CCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh
Confidence                 555555544421             122233456666666555778888899999999999999987766543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.86  E-value=1.5e-20  Score=154.76  Aligned_cols=142  Identities=13%  Similarity=0.078  Sum_probs=115.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |+||+|+||||+|+||+++++.|+++|++|++++|+.....           ..++.++.+|++|++++.++++++|+||
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi   69 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVAGCDGIV   69 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            45789999999999999999999999999999999853221           3568899999999999999999999999


Q ss_pred             EcCCCcc-----------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCccccCCCCchHHHHHHHHHHHHH
Q 044721           82 STVGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        82 ~~a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      ||||...           +..+.++++++.+.+ ++++|+ ||   ++..     .++..+..+...|..+|.++|.+++
T Consensus        70 ~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  148 (267)
T 3rft_A           70 HLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR  148 (267)
T ss_dssp             ECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            9999754           345688999999998 889884 54   3211     2334556677899999999999885


Q ss_pred             ----HcCCCEEEEeccCc
Q 044721          142 ----AEGIPYTYGDVLNH  155 (263)
Q Consensus       142 ----~~~~~~~~gr~~n~  155 (263)
                          +.++++++.|+.+.
T Consensus       149 ~~a~~~g~~~~~vr~~~v  166 (267)
T 3rft_A          149 MYFDKFGQETALVRIGSC  166 (267)
T ss_dssp             HHHHHHCCCEEEEEECBC
T ss_pred             HHHHHhCCeEEEEEeecc
Confidence                56899888887654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.85  E-value=7.6e-22  Score=162.10  Aligned_cols=214  Identities=13%  Similarity=0.099  Sum_probs=130.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+.+|++|+++++++++   
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVV   79 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998     333322 12221  3467889999999998887765   


Q ss_pred             ----CcCEEEEcCCCc-cch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ----QVDVVISTVGHT-LLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ----~~d~vv~~a~~~-~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                          ++|+||||||.. ...    ....-++...+.+                     ....+..++.....+.++.   
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~---  135 (262)
T 1zem_A           80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTIN---------------------VTGAFHVLKAVSRQMITQN---  135 (262)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHT---
T ss_pred             HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHhcC---
Confidence                799999999965 210    0111111111111                     1223344555444444433   


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                        .|+++|+++.....             +......|..+|.+...+++.++.++++.++++|+|+||+..++.......
T Consensus       136 --~g~iv~isS~~~~~-------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~  200 (262)
T 1zem_A          136 --YGRIVNTASMAGVK-------------GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQV  200 (262)
T ss_dssp             --CEEEEEECCHHHHS-------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHH
T ss_pred             --CcEEEEEcchhhcc-------------CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhcc
Confidence              25555555544221             122334566666666567788888999999999999999876665332211


Q ss_pred             -HHHHcC---CC-eeE-EecccccccccCCCCCCCCCCC
Q 044721          227 -AVEAEG---IP-YTY-VASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 -~~~~~~---~~-~~~-~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       ......   .. ... .........+++|+++|+|+|.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  239 (262)
T 1zem_A          201 ELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPG  239 (262)
T ss_dssp             HHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHH
T ss_pred             chhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             111000   11 000 0001112357789999999874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.85  E-value=1e-21  Score=161.41  Aligned_cols=174  Identities=17%  Similarity=0.176  Sum_probs=110.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+.+|++|+++++++++  
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   75 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARR-----QARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAA   75 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            7889999999999999999999999999999999998     433332 22221  3457888999999999888775  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.+  
T Consensus        76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~--  132 (264)
T 3tfo_A           76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVN---------------------IKGVLWGIGAVLPIMEAQRS--  132 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhCCC--
Confidence                 7999999999764111    011111111111                     02233344444444433332  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                         |+++|++|..             +..+..+...|..+|.+...+++.++.++ + +|+||+|+||+..++.
T Consensus       133 ---g~IV~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~  188 (264)
T 3tfo_A          133 ---GQIINIGSIG-------------ALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESEL  188 (264)
T ss_dssp             ---EEEEEECCGG-------------GTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC----
T ss_pred             ---eEEEEEcCHH-------------HcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcc
Confidence               4444444433             22223344455555555555777777787 4 9999999999776544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.85  E-value=8.4e-23  Score=167.35  Aligned_cols=175  Identities=17%  Similarity=0.172  Sum_probs=110.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.. +.+.  ..++..+.+|++|+++++++++   
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   78 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT-----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQID   78 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999999998     4443322 2221  3468889999999999888776   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|+||||||......    ...-.+...+.+                     ....+..++.....+.++.+   
T Consensus        79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n---------------------~~g~~~~~~~~~~~~~~~~~---  134 (257)
T 3imf_A           79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIV---------------------LNGTFYCSQAIGKYWIEKGI---  134 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHTC---
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhhCC---
Confidence                7899999999653110    001111111111                     01223334444444333322   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCC-CCccccccCCCCCcchh
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFG-NDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vn~v~pg~~~~~  219 (263)
                       .|+++|+++..             +..+..+...|..+|.+...+++.++.+|+ +.+|+||+|+||+..++
T Consensus       135 -~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~  193 (257)
T 3imf_A          135 -KGNIINMVATY-------------AWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERT  193 (257)
T ss_dssp             -CCEEEEECCGG-------------GGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSC
T ss_pred             -CcEEEEECchh-------------hccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCC
Confidence             13334333332             122223344555555555557777888887 67999999999987654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.85  E-value=1.1e-21  Score=160.43  Aligned_cols=157  Identities=13%  Similarity=0.083  Sum_probs=108.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+..   ....+.+... +.++..+.+|++|+++++++++      
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIARH-GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTT-SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHhc-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999999843   1111111111 3467888999999999998887      


Q ss_pred             -CcCEEEEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|+||||||.....                       .++.+++.+.+.+ .+++|. ||......    ......|.
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y~  152 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVG----STGKAAYV  152 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC----CTTBHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccC----CCCchhHH
Confidence             899999999965311                       1233444445555 555552 33221110    11134566


Q ss_pred             HHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccccc
Q 044721          131 ATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNA  210 (263)
Q Consensus       131 ~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~  210 (263)
                      .+|.+++.                                                      +++.++.++++.++++|+
T Consensus       153 ~sK~a~~~------------------------------------------------------~~~~la~e~~~~gi~v~~  178 (255)
T 2q2v_A          153 AAKHGVVG------------------------------------------------------LTKVVGLETATSNVTCNA  178 (255)
T ss_dssp             HHHHHHHH------------------------------------------------------HHHHHHHHTTTSSEEEEE
T ss_pred             HHHHHHHH------------------------------------------------------HHHHHHHHhcccCcEEEE
Confidence            66666555                                                      556667788889999999


Q ss_pred             CCCCCcchhcH
Q 044721          211 VEPAKSAFVTK  221 (263)
Q Consensus       211 v~pg~~~~~~~  221 (263)
                      |+||...++..
T Consensus       179 v~Pg~v~t~~~  189 (255)
T 2q2v_A          179 ICPGWVLTPLV  189 (255)
T ss_dssp             EEESSBCCHHH
T ss_pred             EeeCCCcCcch
Confidence            99998776654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.85  E-value=7.8e-23  Score=169.40  Aligned_cols=185  Identities=14%  Similarity=0.127  Sum_probs=130.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-------Ccchhh-hhhhh--ccCCcEEEEccCCCHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-------APSKSQ-LLDHF--KKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~   71 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+....       ..+..+ ..+.+  .+.++..+++|++|+++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            3578999999999999999999999999999999873210       011111 11111  1457889999999999998


Q ss_pred             HHhc-------CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC
Q 044721           72 KAIK-------QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG  144 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~  144 (263)
                      ++++       ++|+||||||.........-.+...+.+                     ....+..++.....+.++..
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~  149 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVN---------------------LTGVYHTIKVAIPTLVKQGT  149 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhCCC
Confidence            8876       7999999999865332212222222222                     13456678887777776542


Q ss_pred             CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          145 IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       145 ~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                          .|+++|+++.......         .........|..+|.+...+++.++.++++++|+||+|+||+..++.
T Consensus       150 ----~g~iv~isS~~~~~~~---------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  212 (278)
T 3sx2_A          150 ----GGSIVLISSSAGLAGV---------GSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM  212 (278)
T ss_dssp             ----CEEEEEECCGGGTSCC---------CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred             ----CcEEEEEccHHhcCCC---------ccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCcc
Confidence                2677776665421110         01125677899999999889999999999999999999999876654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.85  E-value=2.3e-21  Score=158.05  Aligned_cols=155  Identities=20%  Similarity=0.213  Sum_probs=104.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..    ++.+ .+... +.++..+++|++|+++++++++     
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch----hHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999841    2222 12222 3568889999999999888754     


Q ss_pred             --CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|+||||||....                   ..    .+.+++.+.+.+ .+++|. ||......    ..+...|
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y  154 (249)
T 2ew8_A           80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK----IEAYTHY  154 (249)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC----CSSCHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC----CCCchhH
Confidence              79999999997531                   01    123333344444 455552 33221110    1123456


Q ss_pred             HHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccc
Q 044721          130 FATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN  209 (263)
Q Consensus       130 ~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn  209 (263)
                      ..+|.+++.                                                      +++.++.++++.++++|
T Consensus       155 ~asK~a~~~------------------------------------------------------~~~~la~e~~~~gi~v~  180 (249)
T 2ew8_A          155 ISTKAANIG------------------------------------------------------FTRALASDLGKDGITVN  180 (249)
T ss_dssp             HHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHH------------------------------------------------------HHHHHHHHHHhcCcEEE
Confidence            666666665                                                      55666677888999999


Q ss_pred             cCCCCCcchhc
Q 044721          210 AVEPAKSAFVT  220 (263)
Q Consensus       210 ~v~pg~~~~~~  220 (263)
                      +|+||+..++.
T Consensus       181 ~v~Pg~v~t~~  191 (249)
T 2ew8_A          181 AIAPSLVRTAT  191 (249)
T ss_dssp             EEEECCC----
T ss_pred             EEecCcCcCcc
Confidence            99999876654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.85  E-value=1.1e-20  Score=151.04  Aligned_cols=143  Identities=16%  Similarity=0.154  Sum_probs=113.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-HCCCCEEEEEcCCCCCCcc-hhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASV-KAGHPTFVLVRESTLSAPS-KSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |++|+||||+|+||+++++.|+ ++|++|++++|+     ++ +.+.+.. ...++.++.+|++|++++.++++++|+||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vv   78 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ-----LKTRIPPEII-DHERVTVIEGSFQNPGXLEQAVTNAEVVF   78 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS-----HHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC-----ccccchhhcc-CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence            4669999999999999999999 899999999998     43 3322211 24678999999999999999999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee-ccccCCCCccccC-----CCCc-hHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAV-----EPAK-SAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~-----~~~~-~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ||+|...+. ++++++++.+.+ ++++|+ |+.+.........     .... .|..+|..+|.++++.+++|++.|...
T Consensus        79 ~~ag~~n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~  156 (221)
T 3r6d_A           79 VGAMESGSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTW  156 (221)
T ss_dssp             ESCCCCHHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECE
T ss_pred             EcCCCCChh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence            999987666 899999999999 998884 6654432111000     0112 799999999999999999999877553

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.85  E-value=3.7e-22  Score=163.71  Aligned_cols=197  Identities=15%  Similarity=0.154  Sum_probs=113.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..     +..  +.+...++..+.+|++|+++++++++       
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-----ASV--TELRQAGAVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-----HHH--HHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-----HHH--HHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999842     221  11222347899999999999888775       


Q ss_pred             CcCEEEEcCCCccch---hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           76 QVDVVISTVGHTLLG---DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~---~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                      ++|+||||||.....   ....-++...+.+                     ....+..++.....+.+..+     |++
T Consensus        99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~m~~~~~-----g~i  152 (260)
T 3gem_A           99 SLRAVVHNASEWLAETPGEEADNFTRMFSVH---------------------MLAPYLINLHCEPLLTASEV-----ADI  152 (260)
T ss_dssp             CCSEEEECCCCCCCCCTTCHHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHTSSS-----CEE
T ss_pred             CCCEEEECCCccCCCCCCCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHhcCC-----cEE
Confidence            689999999975311   0101111111111                     01222233333332222111     333


Q ss_pred             cCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcC
Q 044721          153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEG  232 (263)
Q Consensus       153 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~  232 (263)
                      +|+++..             +..+......|..+|.+...+++.++.++++ +|+||+|+||...++....       . 
T Consensus       153 v~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~-------~-  210 (260)
T 3gem_A          153 VHISDDV-------------TRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD-------A-  210 (260)
T ss_dssp             EEECCGG-------------GGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC--------------
T ss_pred             EEECChh-------------hcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC-------H-
Confidence            3333322             1112223344444554444467777788888 6999999999876543210       0 


Q ss_pred             CCeeEEecccccccccCCCCCCCCCC
Q 044721          233 IPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                          ..........+++++.+|+|+|
T Consensus       211 ----~~~~~~~~~~p~~r~~~~edva  232 (260)
T 3gem_A          211 ----AYRANALAKSALGIEPGAEVIY  232 (260)
T ss_dssp             -------------CCSCCCCCTHHHH
T ss_pred             ----HHHHHHHhcCCCCCCCCHHHHH
Confidence                0111223345678888888765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.85  E-value=1.2e-21  Score=160.47  Aligned_cols=155  Identities=17%  Similarity=0.147  Sum_probs=106.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcch--hh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK--SQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+.     ++  .+ ..+.+.  +.++..+.+|++|+++++++++   
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ-----QEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAA   76 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG-----GHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-----chHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999999999983     33  22 222221  3468889999999999888776   


Q ss_pred             ----CcCEEEEcCCCccch-------------------h----HHHHHHHHHHhCCc-ceeee-ccccCCCCccccCCCC
Q 044721           76 ----QVDVVISTVGHTLLG-------------------D----QVKIIAAIKEAGNI-KRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~-------------------~----~~~l~~~~~~~~~~-~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                          ++|+||||||.....                   .    .+.+++.+.+.+ . +++|. ||......    ..+.
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----~~~~  151 (258)
T 3a28_C           77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQG----FPIL  151 (258)
T ss_dssp             HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSC----CTTC
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccC----CCCc
Confidence                799999999975310                   1    122333333344 4 55553 44322111    1123


Q ss_pred             chHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcc
Q 044721          127 KSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVD  206 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (263)
                      ..|..+|.+++.                                                      +++.++.++++.++
T Consensus       152 ~~Y~~sK~a~~~------------------------------------------------------~~~~la~e~~~~gi  177 (258)
T 3a28_C          152 SAYSTTKFAVRG------------------------------------------------------LTQAAAQELAPKGH  177 (258)
T ss_dssp             HHHHHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTC
T ss_pred             hhHHHHHHHHHH------------------------------------------------------HHHHHHHHHHhhCe
Confidence            456666666665                                                      55556677888999


Q ss_pred             ccccCCCCCcchhcHH
Q 044721          207 RVNAVEPAKSAFVTKA  222 (263)
Q Consensus       207 ~vn~v~pg~~~~~~~~  222 (263)
                      ++|+|+||...++...
T Consensus       178 ~vn~v~PG~v~t~~~~  193 (258)
T 3a28_C          178 TVNAYAPGIVGTGMWE  193 (258)
T ss_dssp             EEEEEEECCBCSHHHH
T ss_pred             EEEEEECCccCChhhh
Confidence            9999999988776543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.85  E-value=3.7e-22  Score=164.58  Aligned_cols=168  Identities=17%  Similarity=0.198  Sum_probs=109.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|++|||||+|+||+++++.|+++|++|++++|+....            ...+..+.+|++|+++++++++       
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999984321            1246788999999999988776       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|+||||||......    ...-++...+.+                     ....+..++.....+.++..     |+
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~-----g~  134 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVN---------------------VNGSYLMAKYTIPVMLAIGH-----GS  134 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----EE
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcCC-----CE
Confidence            7999999999754110    011111111111                     12233334444444333322     44


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      ++|++|..             +..+......|..+|.+...+++.++.++++ +|+||+|+||...++...
T Consensus       135 iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~  191 (269)
T 3vtz_A          135 IINIASVQ-------------SYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVI  191 (269)
T ss_dssp             EEEECCGG-------------GTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHH
T ss_pred             EEEECchh-------------hccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchh
Confidence            44444433             2222333445555555555577778888988 899999999988776543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=4e-21  Score=158.19  Aligned_cols=156  Identities=17%  Similarity=0.200  Sum_probs=108.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+   .+.++..+.+|++|+++++++++  
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   93 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998     333321 1221   14567889999999999888776  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hhHHHH----HHHHHHhCCcceeee-cccc-CCCCccccCCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GDQVKI----IAAIKEAGNIKRFFP-SEFG-NDVDRVHAVEP  125 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~~~~l----~~~~~~~~~~~~~i~-S~~g-~~~~~~~~~~~  125 (263)
                           ++|+||||||....                   ..+.++    ++.+.+.+ .+++|. ||.. ...    +..+
T Consensus        94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~----~~~~  168 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV----TMPN  168 (267)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC----CSSS
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc----CCCC
Confidence                 79999999997531                   112222    33333444 566663 5443 211    1122


Q ss_pred             CchHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCc
Q 044721          126 AKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDV  205 (263)
Q Consensus       126 ~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (263)
                      ...|..+|.+++.                                                      +++.++.++++.+
T Consensus       169 ~~~Y~asK~a~~~------------------------------------------------------~~~~la~e~~~~g  194 (267)
T 1vl8_A          169 ISAYAASKGGVAS------------------------------------------------------LTKALAKEWGRYG  194 (267)
T ss_dssp             CHHHHHHHHHHHH------------------------------------------------------HHHHHHHHHGGGT
T ss_pred             ChhHHHHHHHHHH------------------------------------------------------HHHHHHHHhcccC
Confidence            4567777777776                                                      4455567788889


Q ss_pred             cccccCCCCCcchhcH
Q 044721          206 DRVNAVEPAKSAFVTK  221 (263)
Q Consensus       206 ~~vn~v~pg~~~~~~~  221 (263)
                      +++|+|+||+..++..
T Consensus       195 i~v~~v~PG~v~T~~~  210 (267)
T 1vl8_A          195 IRVNVIAPGWYRTKMT  210 (267)
T ss_dssp             CEEEEEEECCBCSTTT
T ss_pred             eEEEEEEeccCccccc
Confidence            9999999998766543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.85  E-value=1.1e-21  Score=160.89  Aligned_cols=176  Identities=14%  Similarity=0.129  Sum_probs=109.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|+++ .|+     .++.+. .+.+.  +.++..+.+|++|+++++++++ 
T Consensus         1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (258)
T 3oid_A            1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARS-----KKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQ   75 (258)
T ss_dssp             --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            7788999999999999999999999999999987 666     333221 22221  3468899999999999888775 


Q ss_pred             ------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.  
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~m~~~~--  132 (258)
T 3oid_A           76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNIN---------------------AKALLFCAQEAAKLMEKNG--  132 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHTTT--
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcC--
Confidence                  6799999998653110    001111111111                     0222333444333333222  


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                         .|+++|++|..             +..+......|..+|.+...+++.++.++++.+++||+|+||...++.
T Consensus       133 ---~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  191 (258)
T 3oid_A          133 ---GGHIVSISSLG-------------SIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA  191 (258)
T ss_dssp             ---CEEEEEEEEGG-------------GTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred             ---CcEEEEECchh-------------hCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence               14444443332             222233344555555555557777888999999999999999876553

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.85  E-value=1.6e-21  Score=160.91  Aligned_cols=173  Identities=18%  Similarity=0.201  Sum_probs=110.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+..     +.+ ..+.+ +.++..+.+|++|+++++++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPET-----DLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS-----CHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHH-----HHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999843     322 22233 5678899999999999988876      


Q ss_pred             -CcCEEEEcCCCccc------hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 -QVDVVISTVGHTLL------GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 -~~d~vv~~a~~~~~------~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                       ++|++|||||....      +....-.+...+.+                     ....+..++.....+.++.+    
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~----  138 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN---------------------ARGTMLMCKYAIPRLISAGG----  138 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHTTC----
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC----
Confidence             79999999997621      00011111111111                     01223333433333333221    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                       |+++|+++..             +..+......|..+|.+...+++.++.+|++++|+||+|+||...++.
T Consensus       139 -g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  196 (271)
T 3tzq_B          139 -GAIVNISSAT-------------AHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPR  196 (271)
T ss_dssp             -EEEEEECCGG-------------GTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             -CEEEEECCHH-------------HcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcc
Confidence             3444433332             122223334455555554447777888899999999999999876653

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.85  E-value=5.9e-20  Score=156.53  Aligned_cols=150  Identities=23%  Similarity=0.293  Sum_probs=114.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |.+||+||||||+|+||+++++.|+++  |++|++++|+......   +.+..+...++.++.+|++|++++.++++++|
T Consensus         1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   77 (348)
T 1oc2_A            1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK---ANLEAILGDRVELVVGDIADAELVDKLAAKAD   77 (348)
T ss_dssp             --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG---GGTGGGCSSSEEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh---hHHhhhccCCeEEEECCCCCHHHHHHHhhcCC
Confidence            555789999999999999999999998  8999999997532111   11223324578899999999999999999999


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCC----------------CCccccC
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGND----------------VDRVHAV  123 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~----------------~~~~~~~  123 (263)
                      +|||+|+...               +..+.++++++.+.+ + ++| +||   |+..                .++..+.
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~  155 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY  155 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence            9999999763               234689999999998 8 665 454   3321                2333455


Q ss_pred             CCCchHHHHHHHHHHHHHH----cCCCEEEEeccCc
Q 044721          124 EPAKSAFATKAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       124 ~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      .+.+.|..+|.++|.+++.    .++++++.|..++
T Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v  191 (348)
T 1oc2_A          156 NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNN  191 (348)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeecee
Confidence            6778999999999998864    4899998886653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.85  E-value=5.9e-22  Score=162.16  Aligned_cols=176  Identities=16%  Similarity=0.117  Sum_probs=107.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.  +.++..+.+|++|+++++++++     
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT   76 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999998     333321 12221  3467889999999999988876     


Q ss_pred             --CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|+||||||......    ...-++...+.+                     ....+..++...+.+.++..    .
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~~----~  131 (256)
T 1geg_A           77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNIN---------------------VKGVIWGIQAAVEAFKKEGH----G  131 (256)
T ss_dssp             TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTS----C
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC----C
Confidence              7999999999653110    000111111111                     01222233333333332220    1


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      ++++|+++..             +..+......|..+|.+...+++.++.++++.++++|+|+||...++...
T Consensus       132 g~iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  191 (256)
T 1geg_A          132 GKIINACSQA-------------GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA  191 (256)
T ss_dssp             EEEEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             CEEEEECchh-------------hcCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh
Confidence            3333333222             11111223344444444444666777888889999999999988766543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.85  E-value=4.9e-21  Score=158.75  Aligned_cols=130  Identities=23%  Similarity=0.251  Sum_probs=94.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||++++++|+++|++|++++|+     .++.+.+......++..+.+|++|.++++++++      
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR-----TEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999998     434332222224578999999999999988876      


Q ss_pred             -CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|+||||||....                   ..    ++.+++.+.+.+ .+++|. ||.....    +..+...|.
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~~Y~  152 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL----SFAGFSAYS  152 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC----CCTTCHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC----CCCCchHHH
Confidence             78999999997531                   11    455666667777 677764 5543221    123356788


Q ss_pred             HHHHHHHHHHH
Q 044721          131 ATKAKIRRAVE  141 (263)
Q Consensus       131 ~~k~~~e~~~~  141 (263)
                      .+|.+++.+.+
T Consensus       153 ~sK~a~~~~~~  163 (281)
T 3m1a_A          153 ATKAALEQLSE  163 (281)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888887544

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.6e-22  Score=167.68  Aligned_cols=207  Identities=12%  Similarity=0.118  Sum_probs=121.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.    .++.+ ..+.+.  +.++.++++|++|+++++++++    
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD----AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC----HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999753    22222 122221  4568899999999999888776    


Q ss_pred             ---CcCEEEEcCCCcc--chh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ---QVDVVISTVGHTL--LGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ---~~d~vv~~a~~~~--~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                         ++|+||||||...  ...    ...-++..                     ...|....+..++.....+.++..-.
T Consensus       104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~---------------------~~vN~~g~~~l~~~~~~~~~~~~~~~  162 (280)
T 4da9_A          104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTI---------------------VGVNLRGTVFFTQAVLKAMLASDARA  162 (280)
T ss_dssp             HHSCCCEEEEECC------CCGGGCCHHHHHHH---------------------TTTHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HcCCCCEEEECCCccccCCCChhhCCHHHHHHH---------------------HHHhhHHHHHHHHHHHHHHHHhCCCC
Confidence               7999999999731  000    00000000                     01111334555666666555543100


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                        .|+++|++|..             +..+......|..+|.+...+++.++.++++.+|+||+|+||...++.......
T Consensus       163 --~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~  227 (280)
T 4da9_A          163 --SRSIINITSVS-------------AVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG  227 (280)
T ss_dssp             --CEEEEEECCC--------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------
T ss_pred             --CCEEEEEcchh-------------hccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch
Confidence              15555555443             222334446677777777778888999999999999999999877665432211


Q ss_pred             HHHHcCCCeeEEeccccc-ccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFA-GYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~  259 (263)
                      ...          ..... ..+++|+++|+|+|.
T Consensus       228 ~~~----------~~~~~~~~p~~r~~~pedvA~  251 (280)
T 4da9_A          228 KYD----------GLIESGLVPMRRWGEPEDIGN  251 (280)
T ss_dssp             ------------------------CCBCHHHHHH
T ss_pred             hHH----------HHHhhcCCCcCCcCCHHHHHH
Confidence            100          00111 346778888887653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.85  E-value=5e-22  Score=164.70  Aligned_cols=180  Identities=14%  Similarity=0.105  Sum_probs=119.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC--------Ccchhhhh-hhh--ccCCcEEEEccCCCHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS--------APSKSQLL-DHF--KKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~   71 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....        ..++.+.. +.+  .+.++..+.+|++|+++++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            568999999999999999999999999999999853210        02222211 111  1356888999999999998


Q ss_pred             HHhc-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           72 KAIK-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      ++++       ++|+||||||......    ...-++...+.+                     ....+..++.....+.
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~  152 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVN---------------------LTGTWRTLRATVPAMI  152 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhh---------------------hHHHHHHHHHHHHHHH
Confidence            8875       7999999999764211    111111111111                     1233445666555555


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++..    .|+++|+++..             +..+..+...|..+|.+...+++.++.++++++|+||+|+||...++.
T Consensus       153 ~~~~----~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  215 (280)
T 3pgx_A          153 EAGN----GGSIVVVSSSA-------------GLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM  215 (280)
T ss_dssp             HHCS----CEEEEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred             hcCC----CCEEEEEcchh-------------hccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcc
Confidence            4431    15555555544             223334455677777776668888889999999999999999876654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.84  E-value=1.7e-21  Score=159.86  Aligned_cols=211  Identities=14%  Similarity=0.061  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||++++++|+++|++|++++|+     .++.+.+......++..+.+|++|.++++++++      
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD-----KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999998     444443322225678999999999999888776      


Q ss_pred             -CcCEEEEcCCCccch-----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 -QVDVVISTVGHTLLG-----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~-----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                       ++|++|||||.....     ....-++...+.+                     ....+..++.....+.+...- -..
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~~-~~~  139 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVN---------------------VRGVYLMTSKLIPHFKENGAK-GQE  139 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHhcCCC-CCC
Confidence             789999999975310     0011111111111                     022233344444443332100 001


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      +++++.++..             +..+......|..+|.+...+++.++.++++.++++|+|+||...++..........
T Consensus       140 ~~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~  206 (261)
T 3n74_A          140 CVILNVASTG-------------AGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDS  206 (261)
T ss_dssp             EEEEEECCTT-------------TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------
T ss_pred             eEEEEeCchh-------------hcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCc
Confidence            2333332222             222333344555555555557777888999999999999999876654332211100


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                            ...........+++++.+|+|+|
T Consensus       207 ------~~~~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          207 ------EEIRKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             ----------------CTTSSCCCHHHHH
T ss_pred             ------HHHHHHHhhcCCcCCCcCHHHHH
Confidence                  01111223345677888887765

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=7.4e-22  Score=161.06  Aligned_cols=174  Identities=15%  Similarity=0.073  Sum_probs=111.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh-----ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF-----KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-----~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.. +.+     ...++.++.+|++|.++++++++ 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS-----KQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC-----HHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999998     4333321 221     11568899999999999888775 


Q ss_pred             ------CcCEEEEcCCCccc---hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ------QVDVVISTVGHTLL---GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~---~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                            ++|++|||||....   .....-++...+.+                     ....+..++.....+.++.+  
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~--  137 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEIN---------------------VIAQYGILKTVTEIMKVQKN--  137 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHhCCC--
Confidence                  69999999997531   11111111111111                     12233444444444433332  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                         |+++|++|...             ..+......|..+|.+...+++.++.+|++.++++|+|+||+..++.
T Consensus       138 ---g~iv~isS~~~-------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  195 (250)
T 3nyw_A          138 ---GYIFNVASRAA-------------KYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM  195 (250)
T ss_dssp             ---EEEEEECC--------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             ---eEEEEEccHHh-------------cCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch
Confidence               45554444331             11111234556666665557788888999999999999999876654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.84  E-value=1.3e-21  Score=159.36  Aligned_cols=176  Identities=15%  Similarity=0.099  Sum_probs=122.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+......+.++..+.+|++|+++++++++      
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN-----AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            467899999999999999999999999999999998     444432222225678899999999999988876      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.+                     ....+..++.....+.++..    .|
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~~----~g  133 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVN---------------------LTGTFIVTRAGTDQMRAAGK----AG  133 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----CE
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcCC----Cc
Confidence             7999999999764211    111111111111                     13344556665555554431    25


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++|+++....             .+......|..+|.+...+++.++.+|++++|+||+|+||+..++.
T Consensus       134 ~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  190 (247)
T 3rwb_A          134 RVISIASNTFF-------------AGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDG  190 (247)
T ss_dssp             EEEEECCTHHH-------------HTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             EEEEECchhhc-------------cCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence            56655554421             2233456677777777778888999999999999999999876653

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.84  E-value=5.4e-20  Score=156.68  Aligned_cols=150  Identities=18%  Similarity=0.240  Sum_probs=114.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcC--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQ--   76 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--   76 (263)
                      +++|+||||||||+||+++++.|+++|  ++|++.+|.........   +..+ ..+++.++.+|++|++++.+++++  
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNN---VKSIQDHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGG---GTTTTTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhh---hhhhccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            356899999999999999999999999  56777777642211111   1222 235789999999999999999986  


Q ss_pred             cCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCccccCCCCchHHHH
Q 044721           77 VDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRVHAVEPAKSAFAT  132 (263)
Q Consensus        77 ~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~~~~~~~~~~~~~  132 (263)
                      +|+|||+|+...               +..+.++++++.+.+ ++++|+ |+   |+..     .++..+..|.+.|+.+
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~s  177 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSS  177 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHH
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHH
Confidence            999999999754               334689999999999 998884 54   4432     2456677788999999


Q ss_pred             HHHHHHHHHH----cCCCEEEEeccCc
Q 044721          133 KAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       133 k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      |.++|.+++.    .++++++.|..++
T Consensus       178 K~~~E~~~~~~~~~~g~~~~ilRp~~v  204 (346)
T 4egb_A          178 KASADMIALAYYKTYQLPVIVTRCSNN  204 (346)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeecce
Confidence            9999999865    6999998886653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.84  E-value=6.5e-20  Score=154.04  Aligned_cols=139  Identities=18%  Similarity=0.218  Sum_probs=114.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+|+||||||+||+++++.|+++|++|++++|++..     .+    +  .++.++.+|++ .+++.++++++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~----~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-----KA----I--NDYEYRVSDYT-LEDLINQLNDVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-----cc----C--CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence            4799999999999999999999999999999998321     11    1  16889999999 99999999999999999


Q ss_pred             CCCcc-----------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHHHHHHHHH--
Q 044721           84 VGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIRRAVEA--  142 (263)
Q Consensus        84 a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~~~--  142 (263)
                      |+...           +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..|.+.|+.+|.++|+++++  
T Consensus        70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  148 (311)
T 3m2p_A           70 AATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYS  148 (311)
T ss_dssp             CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Confidence            99753           445789999999999 998884 54   3322    25556677889999999999999865  


Q ss_pred             --cCCCEEEEeccCc
Q 044721          143 --EGIPYTYGDVLNH  155 (263)
Q Consensus       143 --~~~~~~~gr~~n~  155 (263)
                        .++++++.|..++
T Consensus       149 ~~~g~~~~ilRp~~v  163 (311)
T 3m2p_A          149 RKKGLCIKNLRFAHL  163 (311)
T ss_dssp             HHSCCEEEEEEECEE
T ss_pred             HHcCCCEEEEeeCce
Confidence              6999998886653

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.84  E-value=3.5e-22  Score=164.84  Aligned_cols=158  Identities=17%  Similarity=0.168  Sum_probs=107.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++++..    +..+ ..+.+  .+.++..+.+|++|+++++++++    
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST----KDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999887632    2222 11222  14568899999999999888776    


Q ss_pred             ---CcCEEEEcCCCccc-------------------hhHHHHHHHHHHhCCcc--eee-eccccCCCCccccCCCCchHH
Q 044721           76 ---QVDVVISTVGHTLL-------------------GDQVKIIAAIKEAGNIK--RFF-PSEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-------------------~~~~~l~~~~~~~~~~~--~~i-~S~~g~~~~~~~~~~~~~~~~  130 (263)
                         ++|++|||||....                   ....++.+++...- .+  ++| +||.....   .+..+...|.
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~---~~~~~~~~Y~  168 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGRIVLTSSNTSKD---FSVPKHSLYS  168 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCEEEEECCTTTTT---CCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCeEEEEeCchhcc---CCCCCCchhH
Confidence               78999999997641                   12234444444432 22  444 34322100   0111244566


Q ss_pred             HHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccccc
Q 044721          131 ATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNA  210 (263)
Q Consensus       131 ~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~  210 (263)
                      .+|++++.                                                      +++.++.++++.+|+||+
T Consensus       169 asKaa~~~------------------------------------------------------~~~~la~e~~~~gi~vn~  194 (270)
T 3is3_A          169 GSKGAVDS------------------------------------------------------FVRIFSKDCGDKKITVNA  194 (270)
T ss_dssp             HHHHHHHH------------------------------------------------------HHHHHHHHHGGGTCEEEE
T ss_pred             HHHHHHHH------------------------------------------------------HHHHHHHHhcccCeEEEE
Confidence            66666665                                                      566677888999999999


Q ss_pred             CCCCCcchhcHH
Q 044721          211 VEPAKSAFVTKA  222 (263)
Q Consensus       211 v~pg~~~~~~~~  222 (263)
                      |+||...++...
T Consensus       195 v~PG~v~T~~~~  206 (270)
T 3is3_A          195 VAPGGTVTDMFH  206 (270)
T ss_dssp             EEECSBCSTTHH
T ss_pred             EEeCCccChhhh
Confidence            999987776543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.84  E-value=3.9e-21  Score=156.75  Aligned_cols=148  Identities=15%  Similarity=0.118  Sum_probs=102.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+...     .       ..++..+.+|++|+++++++++      
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E-------QYPFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S-------CCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h-------cCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999998431     1       1137788999999999988876      


Q ss_pred             -CcCEEEEcCCCccc-------------------hhH----HHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           76 -QVDVVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                       ++|+||||||....                   ..+    +.+++.+.+.+ .+++|. ||.....    +..+...|.
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~----~~~~~~~Y~  147 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHT----PRIGMSAYG  147 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC----CCCCCchHH
Confidence             79999999997531                   111    22333334555 566653 4432211    112245677


Q ss_pred             HHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccccc
Q 044721          131 ATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNA  210 (263)
Q Consensus       131 ~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~  210 (263)
                      .+|.+++.                                                      +++.++.++++.++++|+
T Consensus       148 ~sK~a~~~------------------------------------------------------~~~~la~e~~~~gi~v~~  173 (250)
T 2fwm_X          148 ASKAALKS------------------------------------------------------LALSVGLELAGSGVRCNV  173 (250)
T ss_dssp             HHHHHHHH------------------------------------------------------HHHHHHHHHGGGTCEEEE
T ss_pred             HHHHHHHH------------------------------------------------------HHHHHHHHhCccCCEEEE
Confidence            77777766                                                      445556678888999999


Q ss_pred             CCCCCcchhc
Q 044721          211 VEPAKSAFVT  220 (263)
Q Consensus       211 v~pg~~~~~~  220 (263)
                      |+||+..++.
T Consensus       174 v~Pg~v~t~~  183 (250)
T 2fwm_X          174 VSPGSTDTDM  183 (250)
T ss_dssp             EEECCC----
T ss_pred             EECCcccCcc
Confidence            9999876654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.84  E-value=7.2e-20  Score=155.55  Aligned_cols=143  Identities=22%  Similarity=0.272  Sum_probs=110.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+||||||+|+||+++++.|+++|++|++++|+...     .+   .+...+++++.+|++|++++.++++++|+|||+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ-----IQ---RLAYLEPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSC-----GG---GGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHh-----hh---hhccCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            4689999999999999999999999999999998532     21   122236889999999999999999999999999


Q ss_pred             CCCcc-------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC-----CccccCCC----CchHHHHHHHHH
Q 044721           84 VGHTL-------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV-----DRVHAVEP----AKSAFATKAKIR  137 (263)
Q Consensus        84 a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~-----~~~~~~~~----~~~~~~~k~~~e  137 (263)
                      |+...             +..+.++++++.+.+ ++++|+ |+   |+...     ++..+..|    .+.|..+|.++|
T Consensus        85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e  163 (342)
T 2x4g_A           85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD  163 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHH
T ss_pred             CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHH
Confidence            98643             345689999999999 988884 54   33211     34455566    788999999999


Q ss_pred             HHHHH---cCCCEEEEeccCc
Q 044721          138 RAVEA---EGIPYTYGDVLNH  155 (263)
Q Consensus       138 ~~~~~---~~~~~~~gr~~n~  155 (263)
                      .+++.   .++++++.|..++
T Consensus       164 ~~~~~~~~~g~~~~ilrp~~v  184 (342)
T 2x4g_A          164 EQAREQARNGLPVVIGIPGMV  184 (342)
T ss_dssp             HHHHHHHHTTCCEEEEEECEE
T ss_pred             HHHHHHhhcCCcEEEEeCCce
Confidence            99865   3899998876553

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.84  E-value=7.8e-22  Score=161.83  Aligned_cols=81  Identities=14%  Similarity=0.235  Sum_probs=66.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc----cCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK----KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.    ..++..+.+|++|+++++++++ 
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRN-----REKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEK   79 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHH
Confidence            356899999999999999999999999999999998     333321 12221    2268889999999999998886 


Q ss_pred             -----CcCEEEEcCCCc
Q 044721           76 -----QVDVVISTVGHT   87 (263)
Q Consensus        76 -----~~d~vv~~a~~~   87 (263)
                           ++|+||||||..
T Consensus        80 ~~~~~gid~lv~~Ag~~   96 (260)
T 2z1n_A           80 ARDLGGADILVYSTGGP   96 (260)
T ss_dssp             HHHTTCCSEEEECCCCC
T ss_pred             HHHhcCCCEEEECCCCC
Confidence                 699999999965

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.84  E-value=2.9e-21  Score=157.68  Aligned_cols=81  Identities=17%  Similarity=0.124  Sum_probs=66.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  ..++..+.+|++|+++++++++   
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN-----AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998     433332 22221  3467889999999999988876   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|+||||||..
T Consensus        82 ~~~g~id~li~~Ag~~   97 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIF   97 (253)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCcC
Confidence                799999999973

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.84  E-value=2.6e-21  Score=159.26  Aligned_cols=78  Identities=22%  Similarity=0.330  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+   .+...++..+.+|++|.++++++++       
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR-----VERLK---ALNLPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHHH---TTCCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHH---HhhcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            46789999999999999999999999999999998     44332   2223468889999999999888776       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|+||||||...
T Consensus        87 ~iD~lvnnAg~~~   99 (266)
T 3p19_A           87 PADAIVNNAGMML   99 (266)
T ss_dssp             SEEEEEECCCCCC
T ss_pred             CCCEEEECCCcCC
Confidence            7999999999763

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.84  E-value=3.3e-21  Score=157.39  Aligned_cols=175  Identities=14%  Similarity=0.094  Sum_probs=107.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.     ++.+. .+.+.  +.++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG-----EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG-----GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999984     33322 12221  3468889999999999988886    


Q ss_pred             --CcCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|++|||||.....    ....-++...+.+                     ....+..++.....+.++.+     
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~~-----  134 (252)
T 3h7a_A           81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMA---------------------CWAGFVSGRESARLMLAHGQ-----  134 (252)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----
T ss_pred             hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC-----
Confidence              789999999975411    0011111111111                     02233334444444333322     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccc-ccCCCCCcchhcH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRV-NAVEPAKSAFVTK  221 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-n~v~pg~~~~~~~  221 (263)
                      |+++|++|..             +..+..+...|..+|.+...+++.++.++++.+|+| |+|+||...++..
T Consensus       135 g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~  194 (252)
T 3h7a_A          135 GKIFFTGATA-------------SLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWV  194 (252)
T ss_dssp             EEEEEEEEGG-------------GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             cEEEEECCHH-------------HcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhh
Confidence            4444443333             222233344555555555557777888899999999 9999998766543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.84  E-value=7.5e-22  Score=163.42  Aligned_cols=181  Identities=14%  Similarity=0.176  Sum_probs=120.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC--------Ccchhh-hhhhh--ccCCcEEEEccCCCHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS--------APSKSQ-LLDHF--KKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~   71 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....        ..++.+ ..+.+  ...++..+.+|++|+++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            578999999999999999999999999999999853210        022222 11211  1356888999999999988


Q ss_pred             HHhc-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           72 KAIK-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      ++++       ++|+||||||......    ...-++...+.+                     ....+..++.....+.
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~  148 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDIN---------------------VTGTWNTVMAGAPRII  148 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh---------------------HHHHHHHHHHHHHHHH
Confidence            8775       6999999999764211    111111111111                     1234445666665555


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++..    .|+++|++|..             +..+......|..+|.+...+++.++.++++.+|+||+|+||+..++.
T Consensus       149 ~~~~----~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  211 (277)
T 3tsc_A          149 EGGR----GGSIILISSAA-------------GMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM  211 (277)
T ss_dssp             HHTS----CEEEEEECCGG-------------GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred             hcCC----CCEEEEEccHh-------------hCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence            5431    15566555544             223334455677777777668888999999999999999999887765


Q ss_pred             H
Q 044721          221 K  221 (263)
Q Consensus       221 ~  221 (263)
                      .
T Consensus       212 ~  212 (277)
T 3tsc_A          212 G  212 (277)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.84  E-value=1.5e-21  Score=157.80  Aligned_cols=174  Identities=17%  Similarity=0.167  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+     .++.+......+.++..+.+|++|+++++++++      
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR-----YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            567899999999999999999999999999999998     444432222223368899999999999888775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.+                     ....+..++.....+.++ +     +
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~-~-----~  128 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESN---------------------LVSTILVAQQTVRLIGER-G-----G  128 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHTTT-C-----E
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHc-C-----C
Confidence             6899999999753111    000011111110                     012222333333222221 1     2


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++|++|..             +..+......|..+|.+...+++.++.++++.++++|+|+||...++.
T Consensus       129 ~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  185 (235)
T 3l6e_A          129 VLANVLSSA-------------AQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF  185 (235)
T ss_dssp             EEEEECCEE-------------CCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred             EEEEEeCHH-------------hcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence            333322221             222333444555555555557777888999999999999999766554

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.84  E-value=1.3e-22  Score=167.17  Aligned_cols=202  Identities=15%  Similarity=0.122  Sum_probs=119.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++++.    .+..+. .+.+  .+.++..+.+|++|+++++++++    
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGK----AAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSC----SHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999986653    222221 1111  14568889999999999888776    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||......    ...-++...+.+                     ....+..++.....+ +.      
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~-~~------  153 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVN---------------------LKGTFNTLREAAQRL-RV------  153 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHE-EE------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHH-hh------
Confidence               7999999999764111    011111111111                     012222333333221 10      


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      -|+++|+++....             .+......|..+|.+...+++.++.++++.+|+||+|+||+..++......   
T Consensus       154 ~g~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---  217 (267)
T 3u5t_A          154 GGRIINMSTSQVG-------------LLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK---  217 (267)
T ss_dssp             EEEEEEECCTHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------
T ss_pred             CCeEEEEeChhhc-------------cCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC---
Confidence            2455554443321             122334456666666666888888999999999999999987765432110   


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                       ...     .........+++|+++|+|+|
T Consensus       218 -~~~-----~~~~~~~~~p~~r~~~pedvA  241 (267)
T 3u5t_A          218 -SDE-----VRDRFAKLAPLERLGTPQDIA  241 (267)
T ss_dssp             ---------CHHHHHTSSTTCSCBCHHHHH
T ss_pred             -CHH-----HHHHHHhcCCCCCCcCHHHHH
Confidence             000     011122335677888887765

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=3e-22  Score=166.12  Aligned_cols=177  Identities=15%  Similarity=0.136  Sum_probs=115.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+   ....+..+++|++|+++++++++   
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR-----PDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     433321 1222   12235889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ----QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                          ++|+||||||....     +....-++...+.+                     ....+..++.....+.++..- 
T Consensus       107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~~~-  164 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAAN---------------------LTGAFLCTQHAFRMMKAQTPR-  164 (281)
T ss_dssp             HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHSSSC-
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCCC-
Confidence                68999999997531     01111111111111                     123344455555554443200 


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                        .|+++|++|..             +..+..+...|..+|.+...+++.++.+++..+|+||+|+||...++..
T Consensus       165 --~g~IV~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  224 (281)
T 4dry_A          165 --GGRIINNGSIS-------------AQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT  224 (281)
T ss_dssp             --CEEEEEECCGG-------------GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC---
T ss_pred             --CcEEEEECCHH-------------hCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh
Confidence              15555555544             2333445566777777766688888899999999999999998776543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.84  E-value=7.2e-22  Score=163.53  Aligned_cols=82  Identities=22%  Similarity=0.234  Sum_probs=66.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.  +.++..+.+|++|+++++++++   
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   94 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVV   94 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            456899999999999999999999999999999998     333321 12221  3467889999999999888776   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|+||||||...
T Consensus        95 ~~~g~iD~lv~~Ag~~~  111 (277)
T 2rhc_B           95 ERYGPVDVLVNNAGRPG  111 (277)
T ss_dssp             HHTCSCSEEEECCCCCC
T ss_pred             HHhCCCCEEEECCCCCC
Confidence                7999999999653

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.84  E-value=8.6e-20  Score=155.52  Aligned_cols=139  Identities=20%  Similarity=0.233  Sum_probs=114.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|+||||||||+||+++++.|+++|++|++++|+...              .++.++.+|++|.+++.++++++|+|||
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence            36789999999999999999999999999999998421              3578899999999999999999999999


Q ss_pred             cCCCcc-------------chhHHHHHHHHHHhCCcceeee-cc---ccCC------CCccccCCCCchHHHHHHHHHHH
Q 044721           83 TVGHTL-------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND------VDRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        83 ~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~------~~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      +|+...             +..+.++++++.+.+ ++++|+ |+   |+..      .++..+..|.+.|+.+|.++|++
T Consensus        84 ~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (347)
T 4id9_A           84 LGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEEL  162 (347)
T ss_dssp             CCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence            999764             345689999999999 998884 54   4431      34556667788999999999999


Q ss_pred             HH----HcCCCEEEEeccCch
Q 044721          140 VE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       140 ~~----~~~~~~~~gr~~n~~  156 (263)
                      ++    +.++++++.|..++.
T Consensus       163 ~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          163 VRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHhcCCceEEEccceEe
Confidence            85    568999999977655

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.84  E-value=1.1e-20  Score=154.89  Aligned_cols=129  Identities=18%  Similarity=0.155  Sum_probs=90.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||++++++|+++|++|++++|+     .++.+.. +.+ ..++..+.+|++|+++++++++     
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-hcCceEEEecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998     4333322 222 2347889999999999988887     


Q ss_pred             --CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchH
Q 044721           76 --QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~  129 (263)
                        ++|+||||||....                   ..    ++.+++.+.+.+ .+++|. ||......    ..+...|
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y  153 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAG----TVACHGY  153 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTBHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCC----CCCchhH
Confidence              89999999996531                   11    144555566666 666663 44332111    1124567


Q ss_pred             HHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVE  141 (263)
Q Consensus       130 ~~~k~~~e~~~~  141 (263)
                      ..+|.+++.+.+
T Consensus       154 ~~sK~a~~~~~~  165 (260)
T 1nff_A          154 TATKFAVRGLTK  165 (260)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            778887777554

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=5.9e-22  Score=163.34  Aligned_cols=206  Identities=21%  Similarity=0.165  Sum_probs=125.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+.    .+..+ .....  ...++.++.+|++|.++++++++  
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER----NDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC----HHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999998553    22221 11111  14568999999999999888776  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|+||||||......    ...-++...+.+                     ....+..++.....+.+...  
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~~~~~l~~~~~~~~~~~~~--  154 (269)
T 3gk3_A           98 LADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTD---------------------LDAMFNVTKQFIAGMVERRF--  154 (269)
T ss_dssp             HHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC--
Confidence                 7999999999764110    011111111111                     02233334444444443332  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++++++....             .+......|..+|.+...+++.++.+++..++++|+|+||+..++.......
T Consensus       155 ---g~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~  218 (269)
T 3gk3_A          155 ---GRIVNIGSVNGS-------------RGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ  218 (269)
T ss_dssp             ---EEEEEECCHHHH-------------HCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---
T ss_pred             ---CEEEEeCChhhc-------------cCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch
Confidence               555555444421             1223344566666665557777888899999999999999877655332211


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                      .         ..........+++++.+|+|+|
T Consensus       219 ~---------~~~~~~~~~~~~~~~~~p~dvA  241 (269)
T 3gk3_A          219 D---------VLEAKILPQIPVGRLGRPDEVA  241 (269)
T ss_dssp             -------------CCSGGGCTTSSCBCHHHHH
T ss_pred             h---------HHHHHhhhcCCcCCccCHHHHH
Confidence            0         1111233445667777777665

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=2e-19  Score=154.24  Aligned_cols=151  Identities=15%  Similarity=0.131  Sum_probs=116.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH--CCCCEEEEEcCCCCCC-----cchhhhhhhhccCCcEEEEccCCCHHHHHHH-h
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVK--AGHPTFVLVRESTLSA-----PSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-I   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~   74 (263)
                      ++|+||||||+||||+++++.|++  .|++|++++|+.....     .+.......+...++.++.+|++|+++++++ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            468999999999999999999999  8999999999754100     0011111222345689999999999999998 8


Q ss_pred             cCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceee-ecc---ccCC---CCccccCCCCchHHHHHH
Q 044721           75 KQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGND---VDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        75 ~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~---~~~~~~~~~~~~~~~~k~  134 (263)
                      .++|+|||+||...             +..+.++++++.+.+ ++ +| +||   |+..   .++..+..|.+.|+.+|.
T Consensus        89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~  166 (362)
T 3sxp_A           89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKL  166 (362)
T ss_dssp             SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHH
T ss_pred             cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHH
Confidence            89999999999654             345789999999998 88 65 454   4432   245556778889999999


Q ss_pred             HHHHHHHHcC--CCEEEEeccCc
Q 044721          135 KIRRAVEAEG--IPYTYGDVLNH  155 (263)
Q Consensus       135 ~~e~~~~~~~--~~~~~gr~~n~  155 (263)
                      ++|.+++...  +++++.|+.+.
T Consensus       167 ~~E~~~~~~~~~~~~~~lR~~~v  189 (362)
T 3sxp_A          167 CMDEFVLSHSNDNVQVGLRYFNV  189 (362)
T ss_dssp             HHHHHHHHTTTTSCEEEEEECSE
T ss_pred             HHHHHHHHHhccCCEEEEEeCce
Confidence            9999998765  78888887664

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.84  E-value=6.3e-21  Score=153.56  Aligned_cols=80  Identities=19%  Similarity=0.268  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCc----CE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQV----DV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----d~   79 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|+++++++++.+    |+
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~   75 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRS-----ESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPST   75 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence            4789999999999999999999999999999998     54444332222567889999999999999998754    89


Q ss_pred             EEEcCCCcc
Q 044721           80 VISTVGHTL   88 (263)
Q Consensus        80 vv~~a~~~~   88 (263)
                      ||||||...
T Consensus        76 lv~~Ag~~~   84 (230)
T 3guy_A           76 VVHSAGSGY   84 (230)
T ss_dssp             EEECCCCCC
T ss_pred             EEEeCCcCC
Confidence            999999653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.84  E-value=1e-20  Score=157.24  Aligned_cols=87  Identities=11%  Similarity=0.199  Sum_probs=67.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcc--hh-hhhhhh--ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS--KS-QLLDHF--KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+|+||++++++|+++|++|++++|+.......  .. +..+.+  .+.++..+++|++|+++++++++ 
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999986532110  11 111111  14568889999999999888876 


Q ss_pred             ------CcCEEEEcCCCcc
Q 044721           76 ------QVDVVISTVGHTL   88 (263)
Q Consensus        76 ------~~d~vv~~a~~~~   88 (263)
                            ++|++|||||...
T Consensus        87 ~~~~~g~id~lvnnAg~~~  105 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAIN  105 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCC
Confidence                  7999999999764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.84  E-value=3e-20  Score=152.34  Aligned_cols=150  Identities=21%  Similarity=0.228  Sum_probs=106.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....           ...++..+.+|++|+++++++++       
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-----------SSTTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            568999999999999999999999999999999985321           12367889999999999988876       


Q ss_pred             CcCEEEEcCCCccc-------------------hhHHHHH----HHHHHhCCcceeee-ccccCCCCccccCCCCchHHH
Q 044721           76 QVDVVISTVGHTLL-------------------GDQVKII----AAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFA  131 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-------------------~~~~~l~----~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~  131 (263)
                      ++|++|||||....                   ..+.++.    +.+.+.+ ..+++. ||.....  ..+..+...|..
T Consensus        96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~~~Y~~  172 (260)
T 3un1_A           96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQ--PMVGMPSALASL  172 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTS--CBTTCCCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcc--CCCCCccHHHHH
Confidence            79999999997531                   1122233    3334555 556653 4322211  011122455666


Q ss_pred             HHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccC
Q 044721          132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAV  211 (263)
Q Consensus       132 ~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v  211 (263)
                      +|.+++.                                                      +++.++.++++.+|+||+|
T Consensus       173 sKaa~~~------------------------------------------------------l~~~la~e~~~~gI~vn~v  198 (260)
T 3un1_A          173 TKGGLNA------------------------------------------------------VTRSLAMEFSRSGVRVNAV  198 (260)
T ss_dssp             HHHHHHH------------------------------------------------------HHHHHHHHTTTTTEEEEEE
T ss_pred             HHHHHHH------------------------------------------------------HHHHHHHHhCcCCeEEEEE
Confidence            7776666                                                      5556677899999999999


Q ss_pred             CCCCcchhc
Q 044721          212 EPAKSAFVT  220 (263)
Q Consensus       212 ~pg~~~~~~  220 (263)
                      +||...++.
T Consensus       199 ~PG~v~t~~  207 (260)
T 3un1_A          199 SPGVIKTPM  207 (260)
T ss_dssp             EECCBCCTT
T ss_pred             eecCCCCCC
Confidence            999876553

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.84  E-value=4.9e-20  Score=153.95  Aligned_cols=148  Identities=16%  Similarity=0.147  Sum_probs=114.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |.++|+|+||||||+||+++++.|+++| ++|++++|++...   ..   ..+...+++++.+|++|++++.++++++|+
T Consensus         2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~---~~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~   75 (299)
T 2wm3_A            2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK---AA---KELRLQGAEVVQGDQDDQVIMELALNGAYA   75 (299)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH---HH---HHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH---HH---HHHHHCCCEEEEecCCCHHHHHHHHhcCCE
Confidence            4446899999999999999999999998 9999999985321   11   122235789999999999999999999999


Q ss_pred             EEEcCCCcc-------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           80 VISTVGHTL-------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        80 vv~~a~~~~-------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      |||+++...       +..++++++++.+.+ ++++|+ |+.+.....  ...+...|+.+|..+|+++++.+++|++.|
T Consensus        76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~--~~~~~~~y~~sK~~~e~~~~~~gi~~~ilr  152 (299)
T 2wm3_A           76 TFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT--AGRLAAAHFDGKGEVEEYFRDIGVPMTSVR  152 (299)
T ss_dssp             EEECCCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHT--TTSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEeCCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccC--CCcccCchhhHHHHHHHHHHHCCCCEEEEe
Confidence            999998532       345688999999999 999987 433321110  112346799999999999999999999999


Q ss_pred             ccCchh
Q 044721          152 VLNHGS  157 (263)
Q Consensus       152 ~~n~~~  157 (263)
                      ..++.+
T Consensus       153 p~~~~~  158 (299)
T 2wm3_A          153 LPCYFE  158 (299)
T ss_dssp             CCEEGG
T ss_pred             ecHHhh
Confidence            766543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.84  E-value=3.2e-21  Score=160.71  Aligned_cols=81  Identities=15%  Similarity=0.273  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-h--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+...    ..+.... .  .+.++.++.+|++|+++++++++    
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG----DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999998421    1111111 1  13568899999999999888776    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus       122 ~~g~iD~lvnnAg~~  136 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQ  136 (291)
T ss_dssp             HHSSCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCc
Confidence               789999999865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.83  E-value=1.2e-19  Score=154.76  Aligned_cols=143  Identities=23%  Similarity=0.256  Sum_probs=115.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC-CC-CEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKA-GH-PTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |+++|+||||||||+||+++++.|+++ |+ +|++++|+     +.+...+ ..+...++.++.+|++|.+++.++++++
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~-----~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~   92 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD-----ELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV   92 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC-----HHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC-----hhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcC
Confidence            456789999999999999999999999 97 99999998     4433322 2233457899999999999999999999


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      |+|||+||...               +.++.++++++.+.+ ++++|+ |+...       ..|.+.|+.+|.++|.+++
T Consensus        93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~-------~~p~~~Y~~sK~~~E~~~~  164 (344)
T 2gn4_A           93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKA-------ANPINLYGATKLCSDKLFV  164 (344)
T ss_dssp             SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGG-------SSCCSHHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCcc-------CCCccHHHHHHHHHHHHHH
Confidence            99999999764               234578999999999 999885 65332       3446789999999999997


Q ss_pred             H-------cCCCEEEEeccCch
Q 044721          142 A-------EGIPYTYGDVLNHG  156 (263)
Q Consensus       142 ~-------~~~~~~~gr~~n~~  156 (263)
                      .       .++++++.|+.+..
T Consensus       165 ~~~~~~~~~g~~~~~vRpg~v~  186 (344)
T 2gn4_A          165 SANNFKGSSQTQFSVVRYGNVV  186 (344)
T ss_dssp             HGGGCCCSSCCEEEEECCCEET
T ss_pred             HHHHHhCCCCcEEEEEEeccEE
Confidence            5       46888888877653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.83  E-value=7.5e-21  Score=158.49  Aligned_cols=133  Identities=14%  Similarity=0.110  Sum_probs=97.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+........++.++.+|++|.++++++++   ++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRD-----TRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            47899999999999999999999999999999999     444432222224568899999999999999887   6799


Q ss_pred             EEEcCCCcc-----------------chhHHHHHHHHHHhCCcceeee-ccccCCCCc---------cccCCCCchHHHH
Q 044721           80 VISTVGHTL-----------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDR---------VHAVEPAKSAFAT  132 (263)
Q Consensus        80 vv~~a~~~~-----------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~---------~~~~~~~~~~~~~  132 (263)
                      ||||||...                 +..+.++++++.... .+++|. ||.......         ..+..+...|..+
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  168 (291)
T 3rd5_A           90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQS  168 (291)
T ss_dssp             EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHH
T ss_pred             EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccCCCCcchHHHH
Confidence            999999753                 234577888887777 677774 553321110         1122334568889


Q ss_pred             HHHHHHHHH
Q 044721          133 KAKIRRAVE  141 (263)
Q Consensus       133 k~~~e~~~~  141 (263)
                      |.+++.+.+
T Consensus       169 K~a~~~~~~  177 (291)
T 3rd5_A          169 KLANLLFTS  177 (291)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            988887544

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.83  E-value=3.3e-21  Score=160.86  Aligned_cols=187  Identities=18%  Similarity=0.114  Sum_probs=119.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-h--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..   ....+.+.. +  .+.++.++.+|++|+++++++++    
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE---EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG---HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc---hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999888732   111111111 1  14568889999999998887765    


Q ss_pred             ---CcCEEEEcCCCcc--------------------chhHHHHHHHHHHhCCcc--eee-eccccCCCCccccCCCCchH
Q 044721           76 ---QVDVVISTVGHTL--------------------LGDQVKIIAAIKEAGNIK--RFF-PSEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 ---~~d~vv~~a~~~~--------------------~~~~~~l~~~~~~~~~~~--~~i-~S~~g~~~~~~~~~~~~~~~  129 (263)
                         ++|++|||||...                    +..+.++.+++...- .+  ++| +||......    ......|
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~~~----~~~~~~Y  199 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAYQP----SPHLLDY  199 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGTSC----CTTCHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhccC----CCCchHH
Confidence               7999999999743                    111234444443332 22  444 233221110    1113456


Q ss_pred             HHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccc
Q 044721          130 FATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN  209 (263)
Q Consensus       130 ~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn  209 (263)
                      ..+|++++.                                                      +++.++.++++.+|+||
T Consensus       200 ~asKaa~~~------------------------------------------------------l~~~la~e~~~~gI~vn  225 (294)
T 3r3s_A          200 AATKAAILN------------------------------------------------------YSRGLAKQVAEKGIRVN  225 (294)
T ss_dssp             HHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTCEEE
T ss_pred             HHHHHHHHH------------------------------------------------------HHHHHHHHHhhcCeEEE
Confidence            666666655                                                      56667788889999999


Q ss_pred             cCCCCCcchhcHHHHHHHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          210 AVEPAKSAFVTKAKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       210 ~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      +|+||...++....       ..... ..........+++|+++|+|+|.
T Consensus       226 ~v~PG~v~t~~~~~-------~~~~~-~~~~~~~~~~p~~r~~~p~dvA~  267 (294)
T 3r3s_A          226 IVAPGPIWTALQIS-------GGQTQ-DKIPQFGQQTPMKRAGQPAELAP  267 (294)
T ss_dssp             EEEECSBCSHHHHT-------TTSCG-GGSTTTTTTSTTSSCBCGGGGHH
T ss_pred             EEecCcCccccccc-------cCCCH-HHHHHHHhcCCCCCCcCHHHHHH
Confidence            99999877654211       01000 01112334567889999998864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.83  E-value=9.4e-22  Score=161.05  Aligned_cols=178  Identities=13%  Similarity=0.122  Sum_probs=122.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.     +..  .+.+ ..++..+++|++|+++++++++      
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~--~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG-----EDV--VADL-GDRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC-----HHH--HHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch-----HHH--HHhc-CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999999962     221  1222 4578899999999999988876      


Q ss_pred             CcCEEEEcCCCccchhH--------HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC-
Q 044721           76 QVDVVISTVGHTLLGDQ--------VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP-  146 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~--------~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~-  146 (263)
                      ++|++|||||.......        ..-++...+.                     |....+..++.....+.+..... 
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v---------------------N~~g~~~l~~~~~~~~~~~~~~~~  137 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI---------------------NLVGSFNVLRLAAERIAKTEPVGP  137 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHTTSCCC--
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHH---------------------ccHHHHHHHHHHHHHHHHhccccc
Confidence            89999999997632111        0111111111                     11334555666666554421000 


Q ss_pred             --EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          147 --YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       147 --~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                        -..|+++|++|..             +..+..+...|..+|.+...+++.++.+|++++|++|+|+||...++..
T Consensus       138 ~~~~~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  201 (257)
T 3tl3_A          138 NAEERGVIINTASVA-------------AFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLL  201 (257)
T ss_dssp             CCCCSEEEEEECCCC---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC
T ss_pred             ccCCCcEEEEEcchh-------------hcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhh
Confidence              0025666555443             3345567789999999998999999999999999999999998766543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.83  E-value=1.5e-19  Score=154.36  Aligned_cols=151  Identities=17%  Similarity=0.164  Sum_probs=115.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh---ccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---KKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ++|+||||||||+||+++++.|+++|++|++++|+.... ....+.+ +.+   ...++.++.+|++|.+++.++++++|
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            568999999999999999999999999999999975321 1112111 111   12578899999999999999999999


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~  135 (263)
                      +|||+|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+.+|.+.|+.+|.+
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~  183 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV  183 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence            9999999753               344688999999998 998884 54   3322    2344555678899999999


Q ss_pred             HHHHHH----HcCCCEEEEeccCc
Q 044721          136 IRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +|.+++    +.++++++.|..++
T Consensus       184 ~e~~~~~~~~~~g~~~~ilRp~~v  207 (352)
T 1sb8_A          184 NELYADVFSRCYGFSTIGLRYFNV  207 (352)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCE
T ss_pred             HHHHHHHHHHHcCCCEEEEEECce
Confidence            999985    34899998886553

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.83  E-value=7e-21  Score=154.86  Aligned_cols=176  Identities=23%  Similarity=0.192  Sum_probs=109.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ||++|+++||||+|+||+++++.|+++|++|++++|+.    +++.+. .+.+.  +.++..+.+|++|+++++++++  
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   76 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQT   76 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            57889999999999999999999999999999999931    333221 12221  3467889999999999988776  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|+||||||......    ...-.+...+.+                     ....+..++.....+.++.   
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~---  132 (246)
T 2uvd_A           77 VDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTN---------------------LKGVFLCTKAVSRFMMRQR---  132 (246)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHT---
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcC---
Confidence                 7999999999753110    000011111111                     0122333444333333222   


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                        .++++|++|.....             +......|..+|.+...+++.++.++++.++++|+|+||+..++
T Consensus       133 --~g~iv~isS~~~~~-------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  190 (246)
T 2uvd_A          133 --HGRIVNIASVVGVT-------------GNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATD  190 (246)
T ss_dssp             --CEEEEEECCTHHHH-------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGG
T ss_pred             --CcEEEEECCHHhcC-------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCc
Confidence              14444444333211             11223345555555545677777888889999999999987654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.83  E-value=2.7e-21  Score=157.29  Aligned_cols=175  Identities=15%  Similarity=0.131  Sum_probs=110.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++..+.+|++|+++++++++   
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATS-----QASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIK   77 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999998     4333321 2221  3568899999999999988775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||......    ...-++...+.+                     ....+..++.....+.++..   
T Consensus        78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~l~~~~~~~~~~~~~---  133 (247)
T 3lyl_A           78 AENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTN---------------------LSSIFRMSKECVRGMMKKRW---  133 (247)
T ss_dssp             HTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC---
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcCC---
Confidence                5899999999763110    000111111111                     01223334444444333322   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        |+++++++....             .+..+...|..+|.+...+.+.++.++++.++++|+|+||...++.
T Consensus       134 --g~iv~isS~~~~-------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  191 (247)
T 3lyl_A          134 --GRIISIGSVVGS-------------AGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDM  191 (247)
T ss_dssp             --EEEEEECCTHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             --eEEEEEcchhhc-------------cCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence              444444333311             1122334455555555556777778888999999999999876554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.83  E-value=1.1e-20  Score=156.83  Aligned_cols=174  Identities=16%  Similarity=0.136  Sum_probs=107.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+.  +.++..+++|++|+++++++++    
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRT-----RTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998     43333 222222  3468889999999999888776    


Q ss_pred             ---CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ---QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                         ++|++|||||....     +....-++...+.+                     ....+..++..+..+.++.+   
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~---  157 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVN---------------------LRGTFLTLHLTVPYLKQRGG---  157 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC---
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcCC---
Confidence               79999999997421     00000011111111                     01222333333333322221   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcc--cchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHT--LLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        |+++|+++..             +..  +..+...|..+|.+...+++.++.++++++|+||+|+||...++.
T Consensus       158 --g~Iv~isS~~-------------~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  217 (283)
T 3v8b_A          158 --GAIVVVSSIN-------------GTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI  217 (283)
T ss_dssp             --EEEEEECCSB-------------TTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred             --ceEEEEcChh-------------hccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence              3333332221             111  122334444444444447777888999999999999999876654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.83  E-value=5.1e-21  Score=158.72  Aligned_cols=179  Identities=14%  Similarity=0.108  Sum_probs=115.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-------Ccchhh-hhhhh--ccCCcEEEEccCCCHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-------APSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~   72 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....       ..+..+ ..+.+  .+.++..+.+|++|++++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            578999999999999999999999999999999974321       011111 11111  14568899999999999888


Q ss_pred             Hhc-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHH
Q 044721           73 AIK-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        73 ~~~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      +++       ++|++|||||......    ...-++...+.+                     ....+..++.....+.+
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~  147 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTN---------------------LTGTFNTIAAVAPGMIK  147 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHH
Confidence            876       7999999999764110    011111111111                     12233445544444444


Q ss_pred             HcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          142 AEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       142 ~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +.+     |+++|++|..             +..+......|..+|.+...+++.++.++++++|+||+|+||...++.
T Consensus       148 ~~~-----g~iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  208 (281)
T 3s55_A          148 RNY-----GRIVTVSSML-------------GHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM  208 (281)
T ss_dssp             HTC-----EEEEEECCGG-------------GGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTT
T ss_pred             cCC-----CEEEEECChh-------------hcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence            332     4555544443             222333445566666666557888889999999999999999876654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.83  E-value=1.4e-21  Score=161.30  Aligned_cols=203  Identities=14%  Similarity=0.170  Sum_probs=119.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.    .+..+.+ +.+  .+.++.++.+|++|+++++++++    
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN----AEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999963    2222211 111  13568899999999999888776    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||......    ...-++...+.+                     ....+..++.....+.++..    
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~----  158 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNN---------------------LTSAFIGCREALKVMSKSRF----  158 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhc---------------------cHHHHHHHHHHHHHHhhcCC----
Confidence               7999999999764110    000011111111                     01223333433333333221    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                       ++++++++....             .+..+...|..+|.+...+++.++.+++..++++|+|+||...++.........
T Consensus       159 -g~iv~isS~~~~-------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~  224 (271)
T 4iin_A          159 -GSVVNVASIIGE-------------RGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDEL  224 (271)
T ss_dssp             -EEEEEECCHHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------
T ss_pred             -CEEEEEechhhc-------------CCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHH
Confidence             444444443321             122233445555555555667777888889999999999988766543321111


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                                ........+++++.+|+|+|
T Consensus       225 ----------~~~~~~~~~~~~~~~p~dvA  244 (271)
T 4iin_A          225 ----------KADYVKNIPLNRLGSAKEVA  244 (271)
T ss_dssp             -------------CGGGCTTCSCBCHHHHH
T ss_pred             ----------HHHHHhcCCcCCCcCHHHHH
Confidence                      11223345667777777665

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.83  E-value=6.8e-21  Score=159.50  Aligned_cols=177  Identities=16%  Similarity=0.110  Sum_probs=107.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++.++.+|++|.++++++++    
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVD-----QPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999998     444332 22222  3468899999999999988776    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|+||||||......    ...-++...+.+                     ....+..++.....+.++..    
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~----  159 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDID---------------------LWGSIHAVEAFLPRLLEQGT----  159 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHCS----
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhh---------------------hHHHHHHHHHHHHHHHhcCC----
Confidence               7999999999753110    000011111110                     01122223333333322220    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      .|++++.+|..             +..+......|..+|.+...+++.++.+++..++++|+|+||+..++...
T Consensus       160 ~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  220 (301)
T 3tjr_A          160 GGHIAFTASFA-------------GLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS  220 (301)
T ss_dssp             CEEEEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH
T ss_pred             CcEEEEeCchh-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc
Confidence            02333322222             11122223334444444444666677888889999999999988776543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.83  E-value=2.1e-21  Score=157.83  Aligned_cols=187  Identities=15%  Similarity=0.185  Sum_probs=117.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +.++|+++||||+|+||++++++|++ .|+.|++.+|+....            ...+..+.+|++|+++++++++    
T Consensus         1 s~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   68 (244)
T 4e4y_A            1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIKN   68 (244)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTT
T ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHHh
Confidence            34678999999999999999999999 789999998884311            2346889999999999998876    


Q ss_pred             -CcCEEEEcCCCccc-------------------hhHHHHHHHHHHhCCc--ceee-eccccCCCCccccCCCCchHHHH
Q 044721           76 -QVDVVISTVGHTLL-------------------GDQVKIIAAIKEAGNI--KRFF-PSEFGNDVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-------------------~~~~~l~~~~~~~~~~--~~~i-~S~~g~~~~~~~~~~~~~~~~~~  132 (263)
                       ++|++|||||....                   ..+..+++++...- .  .++| +||.....    +......|..+
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~----~~~~~~~Y~as  143 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCFI----AKPNSFAYTLS  143 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGTC----CCTTBHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHcc----CCCCCchhHHH
Confidence             78999999997531                   11233333333221 1  1333 23322111    01113455666


Q ss_pred             HHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCC
Q 044721          133 KAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVE  212 (263)
Q Consensus       133 k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~  212 (263)
                      |++++.                                                      +++.++.+++++++++|+|+
T Consensus       144 Kaa~~~------------------------------------------------------~~~~la~e~~~~gi~v~~v~  169 (244)
T 4e4y_A          144 KGAIAQ------------------------------------------------------MTKSLALDLAKYQIRVNTVC  169 (244)
T ss_dssp             HHHHHH------------------------------------------------------HHHHHHHHHGGGTCEEEEEE
T ss_pred             HHHHHH------------------------------------------------------HHHHHHHHHHHcCeEEEEEe
Confidence            666655                                                      56667788889999999999


Q ss_pred             CCCcchhcHHHHHHH-HHHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          213 PAKSAFVTKAKIRRA-VEAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       213 pg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                      ||...++........ ....+..+...........+++|+++|+|+|
T Consensus       170 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  216 (244)
T 4e4y_A          170 PGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIA  216 (244)
T ss_dssp             ESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHH
T ss_pred             cCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHH
Confidence            998877654433221 1111111111111223345667777777765

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.83  E-value=5.6e-20  Score=150.75  Aligned_cols=155  Identities=19%  Similarity=0.242  Sum_probs=106.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHh----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAI----   74 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~----   74 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+ ..+.+.  +.++..+.+|++|++++++++    
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998     33332 122221  345788999999999988877    


Q ss_pred             ----cCcCEEEEcCCCccc-------------------hhHHHHHH----HHHHhCCcceeee-ccccCCCCccccCCCC
Q 044721           75 ----KQVDVVISTVGHTLL-------------------GDQVKIIA----AIKEAGNIKRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        75 ----~~~d~vv~~a~~~~~-------------------~~~~~l~~----~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                          .++|+||||||....                   ..+.++.+    .+.+.+ .+++|. ||.....    +..+.
T Consensus        82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~  156 (260)
T 2ae2_A           82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGAL----AVPYE  156 (260)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTS----CCTTC
T ss_pred             HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc----CCCCc
Confidence                579999999996531                   11122222    334444 556553 4432211    11123


Q ss_pred             chHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcc
Q 044721          127 KSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVD  206 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (263)
                      ..|..+|.+++.                                                      +++.++.+++++++
T Consensus       157 ~~Y~~sK~a~~~------------------------------------------------------~~~~la~e~~~~gi  182 (260)
T 2ae2_A          157 AVYGATKGAMDQ------------------------------------------------------LTRCLAFEWAKDNI  182 (260)
T ss_dssp             HHHHHHHHHHHH------------------------------------------------------HHHHHHHHTGGGTE
T ss_pred             chHHHHHHHHHH------------------------------------------------------HHHHHHHHHhhcCc
Confidence            456667776666                                                      55556677888999


Q ss_pred             ccccCCCCCcchhc
Q 044721          207 RVNAVEPAKSAFVT  220 (263)
Q Consensus       207 ~vn~v~pg~~~~~~  220 (263)
                      ++|+|+||...++.
T Consensus       183 ~v~~v~Pg~v~t~~  196 (260)
T 2ae2_A          183 RVNGVGPGVIATSL  196 (260)
T ss_dssp             EEEEEEECSBCSHH
T ss_pred             EEEEEecCCCCCcc
Confidence            99999999876654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.83  E-value=3.1e-21  Score=158.48  Aligned_cols=80  Identities=23%  Similarity=0.308  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh---ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+..    ...+.+...   .+.++.++++|++|+++++++++    
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT----TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999988742    222211111   13468899999999999988876    


Q ss_pred             ---CcCEEEEcCCC
Q 044721           76 ---QVDVVISTVGH   86 (263)
Q Consensus        76 ---~~d~vv~~a~~   86 (263)
                         ++|+||||||.
T Consensus        82 ~~g~id~lv~~Ag~   95 (264)
T 3i4f_A           82 HFGKIDFLINNAGP   95 (264)
T ss_dssp             HHSCCCEEECCCCC
T ss_pred             HhCCCCEEEECCcc
Confidence               79999999993

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.83  E-value=2.2e-19  Score=152.15  Aligned_cols=145  Identities=21%  Similarity=0.278  Sum_probs=113.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   79 (263)
                      +++|+||||||+|+||+++++.|+++|++|++++|+....    .+....+  .++.++.+|++|.+++.++++  ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK----REVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC----GGGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc----hhhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            3568999999999999999999999999999999974321    1111111  468889999999999999999  9999


Q ss_pred             EEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccC---CC------CccccCCCCchHHHHHHHHH
Q 044721           80 VISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGN---DV------DRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        80 vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~---~~------~~~~~~~~~~~~~~~k~~~e  137 (263)
                      |||+||...            +..+.++++++.+.+ ++++|+ |+...   ..      ++..  .+...|..+|.++|
T Consensus        92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e  168 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGE  168 (330)
T ss_dssp             EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHH
T ss_pred             EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHH
Confidence            999999653            245688999999998 888884 54322   11      1111  36788999999999


Q ss_pred             HHHHHcCCCEEEEeccCc
Q 044721          138 RAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus       138 ~~~~~~~~~~~~gr~~n~  155 (263)
                      .+++..++++++.|..+.
T Consensus       169 ~~~~~~~~~~~~iR~~~v  186 (330)
T 2pzm_A          169 AFLMMSDVPVVSLRLANV  186 (330)
T ss_dssp             HHHHTCSSCEEEEEECEE
T ss_pred             HHHHHcCCCEEEEeeeee
Confidence            999988999998886553

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.83  E-value=1.2e-20  Score=155.23  Aligned_cols=156  Identities=15%  Similarity=0.143  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc----cCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK----KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.    +.++..+.+|++|+++++++++ 
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   85 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA   85 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999998     333321 12221    3468889999999999988776 


Q ss_pred             ------CcCEEEEcCCCccc-h-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCC
Q 044721           76 ------QVDVVISTVGHTLL-G-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVE  124 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~-~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~  124 (263)
                            ++|+||||||.... .                       ..+.+++.+.+.+ .+++|. ||......    ..
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~  160 (267)
T 1iy8_A           86 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRG----IG  160 (267)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSB----CS
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccC----CC
Confidence                  78999999986431 0                       1123444454555 455552 33221110    11


Q ss_pred             CCchHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCC
Q 044721          125 PAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGND  204 (263)
Q Consensus       125 ~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (263)
                      +...|..+|.+++.                                                      +++.++.++++.
T Consensus       161 ~~~~Y~asK~a~~~------------------------------------------------------~~~~la~e~~~~  186 (267)
T 1iy8_A          161 NQSGYAAAKHGVVG------------------------------------------------------LTRNSAVEYGRY  186 (267)
T ss_dssp             SBHHHHHHHHHHHH------------------------------------------------------HHHHHHHHHGGG
T ss_pred             CCccHHHHHHHHHH------------------------------------------------------HHHHHHHHHHhc
Confidence            13456666666655                                                      556666788889


Q ss_pred             ccccccCCCCCcchhcH
Q 044721          205 VDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       205 ~~~vn~v~pg~~~~~~~  221 (263)
                      +++||+|+||+..++..
T Consensus       187 gi~v~~v~PG~v~t~~~  203 (267)
T 1iy8_A          187 GIRINAIAPGAIWTPMV  203 (267)
T ss_dssp             TCEEEEEEECSBCSHHH
T ss_pred             CeEEEEEEeCCCcCcch
Confidence            99999999998776553

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.83  E-value=4e-21  Score=157.54  Aligned_cols=202  Identities=12%  Similarity=0.108  Sum_probs=111.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++++..    +..+ ..+.+.  +.++..+.+|++|+++++++++    
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA----EGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC----HHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999865532    2221 122221  4568899999999999988876    


Q ss_pred             ---CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ---QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                         ++|++|||||....     .....-++...+.+                     ....+..++.....+.+      
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~------  135 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVN---------------------LTSLFLTAKTALPKMAK------  135 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHGGGEEE------
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHhc------
Confidence               79999999986520     00011111111111                     01222233332222110      


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                       .|+++|+++.....            .+..+...|..+|.+...+++.++.++++. |+||+|+||...++....... 
T Consensus       136 -~g~iv~isS~~~~~------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~-  200 (259)
T 3edm_A          136 -GGAIVTFSSQAGRD------------GGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK-  200 (259)
T ss_dssp             -EEEEEEECCHHHHH------------CCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC---------
T ss_pred             -CCEEEEEcCHHhcc------------CCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC-
Confidence             24444444433210            122233445555555555777778888887 999999999877654332211 


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                         .+     .........+++|+++|+|+|
T Consensus       201 ---~~-----~~~~~~~~~p~~r~~~pedva  223 (259)
T 3edm_A          201 ---PE-----VRERVAGATSLKREGSSEDVA  223 (259)
T ss_dssp             ----------------------CCBCHHHHH
T ss_pred             ---hH-----HHHHHHhcCCCCCCcCHHHHH
Confidence               00     011122334667777777765

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.83  E-value=1.1e-20  Score=153.91  Aligned_cols=78  Identities=19%  Similarity=0.285  Sum_probs=64.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------Cc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------QV   77 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   77 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++..+.+|++|+++++++++       ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999998     444332222113568889999999999998876       68


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |+||||||..
T Consensus        76 D~lvnnAg~~   85 (248)
T 3asu_A           76 DILVNNAGLA   85 (248)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCcC
Confidence            9999999964

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.83  E-value=1.5e-21  Score=160.68  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             CCCCeEEEEcCCC-hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTG-YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+| +||+++++.|+++|++|++++|+     .++.+ ..+.+   ...++.++.+|++|+++++++++ 
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH-----ERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence            4578999999997 79999999999999999999998     33322 12222   23578999999999999888775 


Q ss_pred             ------CcCEEEEcCCCcc
Q 044721           76 ------QVDVVISTVGHTL   88 (263)
Q Consensus        76 ------~~d~vv~~a~~~~   88 (263)
                            ++|+||||||...
T Consensus        95 ~~~~~g~id~li~~Ag~~~  113 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGG  113 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHhCCCcEEEECCCcCC
Confidence                  6899999999753

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.83  E-value=1.7e-19  Score=153.24  Aligned_cols=149  Identities=17%  Similarity=0.217  Sum_probs=113.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcC--cC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQ--VD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d   78 (263)
                      |++|+||||||+|+||+++++.|+++|++|++++|+......   ..+..+ ...++.++.+|++|++++.+++++  +|
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS---WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPD   77 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT---HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc---ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999998543211   111222 124688899999999999999985  69


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCc-ceeee-cc---ccCC----CCccccCCCCchHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNI-KRFFP-SE---FGND----VDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~-~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~  134 (263)
                      +|||+||...               +..+.++++++.+.+ + +++|+ |+   ||..    .++..+..+.+.|+.+|.
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~  156 (345)
T 2z1m_A           78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKL  156 (345)
T ss_dssp             EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHH
Confidence            9999999753               234688999999888 7 78874 54   3432    234455667889999999


Q ss_pred             HHHHHHHH----cCCCEEEEeccC
Q 044721          135 KIRRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       135 ~~e~~~~~----~~~~~~~gr~~n  154 (263)
                      ++|.+++.    .+++++++|..|
T Consensus       157 ~~e~~~~~~~~~~~~~~~~~r~~~  180 (345)
T 2z1m_A          157 FGHWITVNYREAYNMFACSGILFN  180 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHhCCceEeeeeee
Confidence            99998854    488998888766

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.83  E-value=3.2e-19  Score=152.01  Aligned_cols=150  Identities=23%  Similarity=0.310  Sum_probs=113.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCC-----CCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL-----SAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~   76 (263)
                      +|+|+||||+|+||+++++.|+++|++|++++|+...     ...+..+.+......++.++.+|++|++++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999999999987432     00122222222224578999999999999999998  8


Q ss_pred             cCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCC-CchHHHH
Q 044721           77 VDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEP-AKSAFAT  132 (263)
Q Consensus        77 ~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~-~~~~~~~  132 (263)
                      +|+|||+|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..| .+.|..+
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s  160 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence            999999999753               234678999999988 888884 54   3321    234445556 7889999


Q ss_pred             HHHHHHHHHHc---C--CCEEEEeccC
Q 044721          133 KAKIRRAVEAE---G--IPYTYGDVLN  154 (263)
Q Consensus       133 k~~~e~~~~~~---~--~~~~~gr~~n  154 (263)
                      |.++|.+++..   +  +++++.|..+
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~lR~~~  187 (348)
T 1ek6_A          161 KFFIEEMIRDLCQADKTWNAVLLRYFN  187 (348)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECE
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEeecc
Confidence            99999998642   4  8888888544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.82  E-value=1.5e-21  Score=160.69  Aligned_cols=201  Identities=17%  Similarity=0.087  Sum_probs=114.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+....     +        ....+.+|++|.++++++++       
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-----~--------~~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-----A--------ADLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-----C--------CSEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----H--------hhhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999984321     1        12334789999988877664       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.+     |+
T Consensus        94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~-----g~  147 (266)
T 3uxy_A           94 RLDIVVNNAGVISRGRITETTDADWSLSLGVN---------------------VEAPFRICRAAIPLMAAAGG-----GA  147 (266)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----EE
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcCC-----cE
Confidence            7999999999764110    000011111110                     01222233333333222221     33


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAE  231 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~  231 (263)
                      ++|+++..             +..+......|..+|.+...+++.++.++++.+|++|+|+||...++......   ...
T Consensus       148 iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~  211 (266)
T 3uxy_A          148 IVNVASCW-------------GLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF---AKR  211 (266)
T ss_dssp             EEEECCSB-------------TTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH---HHT
T ss_pred             EEEECCHH-------------hCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh---hcc
Confidence            33332221             11222233344444444444666777889999999999999988766533221   111


Q ss_pred             CCCeeEEecccccccccCCCCCCCCCC
Q 044721          232 GIPYTYVASNFFAGYFLPNLSQPGATA  258 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~e~~  258 (263)
                      ...............+++|+++|+|+|
T Consensus       212 ~~~~~~~~~~~~~~~p~~r~~~pedvA  238 (266)
T 3uxy_A          212 GFDPDRAVAELGRTVPLGRIAEPEDIA  238 (266)
T ss_dssp             TCCHHHHHHHHHTTSTTSSCBCHHHHH
T ss_pred             cccchHHHHHHHhcCCCCCCcCHHHHH
Confidence            111000001122345667777777765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.82  E-value=1.7e-19  Score=149.69  Aligned_cols=136  Identities=21%  Similarity=0.277  Sum_probs=112.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      |+|+||||||+||+++++.|+++  |++|++++|++..     .+   .+...++.++.+|++|++++.++++++|+|||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~---~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-----AS---TLADQGVEVRHGDYNQPESLQKAFAGVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----TH---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH-----Hh---HHhhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence            57999999999999999999998  9999999998432     21   12235688999999999999999999999999


Q ss_pred             cCCCc-----cchhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCch
Q 044721           83 TVGHT-----LLGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHG  156 (263)
Q Consensus        83 ~a~~~-----~~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~  156 (263)
                      +|+..     .+..+.++++++.+.+ ++++++ |+.+...      . ...|..+|..+|+++++.++++++.|...+.
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~------~-~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~  144 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE------S-IIPLAHVHLATEYAIRTTNIPYTFLRNALYT  144 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGG------C-CSTHHHHHHHHHHHHHHTTCCEEEEEECCBH
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC------C-CCchHHHHHHHHHHHHHcCCCeEEEECCEec
Confidence            99864     3456789999999999 999885 6654421      1 2479999999999999999999999975543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.82  E-value=7.3e-21  Score=156.22  Aligned_cols=205  Identities=16%  Similarity=0.141  Sum_probs=114.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|....  .++.+ ..+.+.  +.++..+.+|++|+++++++++    
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKD--SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGG--HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999886322  11222 122222  3457889999999999988876    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||......    ...-++...+.+                     ....+..++.....+ +      .
T Consensus        88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~m-~------~  139 (262)
T 3ksu_A           88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTIN---------------------NKVAYFFIKQAAKHM-N------P  139 (262)
T ss_dssp             HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHTTE-E------E
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHhh-c------C
Confidence               7999999999753110    001111111111                     011222233322221 0      0


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      .|+++|+++......             ......|..+|.+...+++.++.++++++|+||+|+||+..++......   
T Consensus       140 ~g~iv~isS~~~~~~-------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---  203 (262)
T 3ksu_A          140 NGHIITIATSLLAAY-------------TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---  203 (262)
T ss_dssp             EEEEEEECCCHHHHH-------------HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---
T ss_pred             CCEEEEEechhhccC-------------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---
Confidence            234444333221111             1111234444444444777788899999999999999987765432100   


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..      ..........+++|+.+|+|+|.
T Consensus       204 ~~------~~~~~~~~~~~~~r~~~pedvA~  228 (262)
T 3ksu_A          204 TK------ESTAFHKSQAMGNQLTKIEDIAP  228 (262)
T ss_dssp             ------------------CCCCSCCGGGTHH
T ss_pred             ch------HHHHHHHhcCcccCCCCHHHHHH
Confidence            00      00111223457788888988864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=2.8e-19  Score=151.52  Aligned_cols=149  Identities=18%  Similarity=0.187  Sum_probs=114.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcC--cCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQ--VDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~   79 (263)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.........   ..+ ...++.++.+|++|++++.+++++  +|+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL---RELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH---HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccch---hhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            46899999999999999999999999999999998643211112   111 134678899999999999999985  699


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCc-ceeee-cc---ccCC----CCccccCCCCchHHHHHHH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNI-KRFFP-SE---FGND----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~-~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~  135 (263)
                      |||+|+...               +..+.++++++.+.+ + +++|+ |+   |+..    .++..+..|.+.|+.+|.+
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~  168 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLY  168 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHH
Confidence            999999754               234678999999988 7 78774 54   3322    2455566778899999999


Q ss_pred             HHHHHHH----cCCCEEEEeccCc
Q 044721          136 IRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      +|.+++.    .++++++.|+.+.
T Consensus       169 ~e~~~~~~~~~~~~~~~i~r~~~v  192 (335)
T 1rpn_A          169 GHWITVNYRESFGLHASSGILFNH  192 (335)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCE
T ss_pred             HHHHHHHHHHHcCCcEEEEeeCcc
Confidence            9999864    4899999887663

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.82  E-value=9.3e-21  Score=154.71  Aligned_cols=81  Identities=20%  Similarity=0.225  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccC--CCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDV--LNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~--~~~~~~~~~~~   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+   ...++.++.+|+  +|.++++++++
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRN-----EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence            356899999999999999999999999999999998     433322 1221   234788999999  89988887775


Q ss_pred             -------CcCEEEEcCCCc
Q 044721           76 -------QVDVVISTVGHT   87 (263)
Q Consensus        76 -------~~d~vv~~a~~~   87 (263)
                             ++|+||||||..
T Consensus        85 ~~~~~~g~id~lv~nAg~~  103 (252)
T 3f1l_A           85 RIAVNYPRLDGVLHNAGLL  103 (252)
T ss_dssp             HHHHHCSCCSEEEECCCCC
T ss_pred             HHHHhCCCCCEEEECCccC
Confidence                   799999999974

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.82  E-value=4.8e-20  Score=155.76  Aligned_cols=158  Identities=20%  Similarity=0.250  Sum_probs=107.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+......++.+.+...   .+.++..+.+|++|+++++++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998543323333322211   14568899999999999988886   


Q ss_pred             ----CcCEEEEcCCCcc-------------------chhHHHHHH----HHHHhCCcceee-eccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTL-------------------LGDQVKIIA----AIKEAGNIKRFF-PSEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~-------------------~~~~~~l~~----~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~  127 (263)
                          ++|+||||||...                   +.++.++++    .+.+.+ .+++| +||......   ......
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~---~~~~~~  158 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGG---TPPYLA  158 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC---CCSSCH
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccC---CCCcch
Confidence                8999999999653                   112233333    335555 56665 344322110   011134


Q ss_pred             hHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccc
Q 044721          128 SAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDR  207 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (263)
                      .|..+|.+++.                                                      +++.++.++++.+|+
T Consensus       159 ~Y~asKaa~~~------------------------------------------------------~~~~la~el~~~gI~  184 (324)
T 3u9l_A          159 PYFAAKAAMDA------------------------------------------------------IAVQYARELSRWGIE  184 (324)
T ss_dssp             HHHHHHHHHHH------------------------------------------------------HHHHHHHHHHTTTEE
T ss_pred             hHHHHHHHHHH------------------------------------------------------HHHHHHHHhhhhCcE
Confidence            57777777776                                                      445556778888999


Q ss_pred             cccCCCCCcc
Q 044721          208 VNAVEPAKSA  217 (263)
Q Consensus       208 vn~v~pg~~~  217 (263)
                      +|+|+||...
T Consensus       185 v~~v~PG~v~  194 (324)
T 3u9l_A          185 TSIIVPGAFT  194 (324)
T ss_dssp             EEEEEECCC-
T ss_pred             EEEEECCccc
Confidence            9999999654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.82  E-value=2e-19  Score=154.76  Aligned_cols=145  Identities=21%  Similarity=0.317  Sum_probs=112.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC-CHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL-NHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~   79 (263)
                      |++|+||||||||+||+++++.|+++ |++|++++|+...     ...+  ....++.++.+|++ |.+++.++++++|+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-----~~~~--~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~   94 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDR-----LGDL--VKHERMHFFEGDITINKEWVEYHVKKCDV   94 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTT-----TGGG--GGSTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhh-----hhhh--ccCCCeEEEeCccCCCHHHHHHHhccCCE
Confidence            45789999999999999999999998 9999999998533     2111  11357899999999 99999999999999


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCCC----CccccC-------CCCchH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGNDV----DRVHAV-------EPAKSA  129 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~~----~~~~~~-------~~~~~~  129 (263)
                      |||+|+...               +..+.++++++.+.+  +++| +|+   |+...    .+....       .|.+.|
T Consensus        95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y  172 (372)
T 3slg_A           95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIY  172 (372)
T ss_dssp             EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHH
T ss_pred             EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcH
Confidence            999999764               233578999999987  5555 454   44321    122211       456689


Q ss_pred             HHHHHHHHHHHHHc---CCCEEEEeccCc
Q 044721          130 FATKAKIRRAVEAE---GIPYTYGDVLNH  155 (263)
Q Consensus       130 ~~~k~~~e~~~~~~---~~~~~~gr~~n~  155 (263)
                      +.+|.++|++++..   ++++++.|..++
T Consensus       173 ~~sK~~~E~~~~~~~~~g~~~~ilRp~~v  201 (372)
T 3slg_A          173 ACSKQLMDRVIWGYGMEGLNFTLFRPFNW  201 (372)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEccccc
Confidence            99999999999766   899999887664

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.82  E-value=2.2e-19  Score=153.55  Aligned_cols=151  Identities=17%  Similarity=0.211  Sum_probs=113.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   79 (263)
                      |++|+||||||+|+||+++++.|+++|++|++++|+.... ....+.+.  ...++.++.+|++|++++.+++++  +|+
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLFETAR--VADGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc-chhhHhhc--cCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence            4578999999999999999999999999999999985432 11111111  134788999999999999999986  899


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccC-----CCCccccCCCCchHHHHHHH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGN-----DVDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~-----~~~~~~~~~~~~~~~~~k~~  135 (263)
                      |||+||...               +..+.++++++.+.+.++++|+ |+   |+.     ...+..+..+.+.|..+|.+
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~  163 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGC  163 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHH
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHH
Confidence            999999542               3346788999888743678774 54   332     22334455678899999999


Q ss_pred             HHHHHHHc-------------CCCEEEEeccCc
Q 044721          136 IRRAVEAE-------------GIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~~~-------------~~~~~~gr~~n~  155 (263)
                      +|++++..             ++++++.|..+.
T Consensus       164 ~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v  196 (357)
T 1rkx_A          164 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNV  196 (357)
T ss_dssp             HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCE
T ss_pred             HHHHHHHHHHHHhhhhccccCCceEEEEeecee
Confidence            99998643             899998886664

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.82  E-value=5.8e-21  Score=158.28  Aligned_cols=174  Identities=17%  Similarity=0.149  Sum_probs=108.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+.+|++|+++++++++    
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN-----GNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     433332 22222  3468889999999999888776    


Q ss_pred             ---CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ---QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                         ++|+||||||....     .....-++...+.+                     ....+..++.....+.+..+   
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~~~~~---  137 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTN---------------------LTSAFLAAKYQVPAIAALGG---  137 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHTTC---
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcCC---
Confidence               79999999996521     00001111111111                     01223334433333333221   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCc-ccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGH-TLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        |+++|+++..             +. .+......|..+|.+...+++.++.++++.+|+||+|+||...++.
T Consensus       138 --g~iv~isS~~-------------~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  196 (280)
T 3tox_A          138 --GSLTFTSSFV-------------GHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA  196 (280)
T ss_dssp             --EEEEEECCSB-------------TTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred             --CEEEEEcChh-------------hCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence              3333332222             11 1223334455555554447777888899999999999999766543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.82  E-value=5.8e-19  Score=149.65  Aligned_cols=150  Identities=19%  Similarity=0.260  Sum_probs=112.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |++|+||||||+||||+++++.|+++|  ++|++++|+......+..   ..+. ..++.++.+|++|++++.+++.++|
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   77 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL---KDLEDDPRYTFVKGDVADYELVKELVRKVD   77 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG---TTTTTCTTEEEEECCTTCHHHHHHHHHTCS
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH---hhhccCCceEEEEcCCCCHHHHHHHhhCCC
Confidence            345789999999999999999999987  899999987422111111   2221 3468899999999999999999999


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCc-ceeee-cc---ccCC----CCccccCCCCchHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNI-KRFFP-SE---FGND----VDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~-~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~  134 (263)
                      +|||+||...               +..+.++++++.+.+ . +++|+ ||   |+..    .++..+..+.+.|..+|.
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (336)
T 2hun_A           78 GVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKA  156 (336)
T ss_dssp             EEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHH
T ss_pred             EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHH
Confidence            9999999753               234678999998887 5 67774 54   4432    234455667889999999


Q ss_pred             HHHHHHHH----cCCCEEEEeccCc
Q 044721          135 KIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       135 ~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      ++|.+++.    .++++++.|..++
T Consensus       157 ~~e~~~~~~~~~~~~~~~ilrp~~v  181 (336)
T 2hun_A          157 ASDMLVLGWTRTYNLNASITRCTNN  181 (336)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeeee
Confidence            99998864    5889988886553

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.82  E-value=2.9e-20  Score=151.32  Aligned_cols=174  Identities=17%  Similarity=0.219  Sum_probs=109.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+.+|++|+++++++++   
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   79 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARR-----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTV   79 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998     433332 12221  3468889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|+||||||......    ...-++...+.+                     ....+..++.....+.++.    
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~~~~~----  134 (247)
T 2jah_A           80 EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTN---------------------LLGLMYMTRAALPHLLRSK----  134 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHT----
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHCC----
Confidence                7999999999753110    000011111111                     0222333444333333221    


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        |+++|++|..             +..+......|..+|.+...+++.++.++++.+++||+|+||+..++.
T Consensus       135 --g~iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  192 (247)
T 2jah_A          135 --GTVVQMSSIA-------------GRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL  192 (247)
T ss_dssp             --CEEEEECCGG-------------GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             --CEEEEEccHH-------------hcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence              2333333322             111222334455555555557777788899999999999999866543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.82  E-value=2.4e-20  Score=153.12  Aligned_cols=79  Identities=25%  Similarity=0.250  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.. +.+ ..++..+++|++|+++++++++      
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD-----VMAAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999998     4333322 222 2367889999999999988876      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|+||||||..
T Consensus        85 g~iD~lv~~Ag~~   97 (263)
T 3ak4_A           85 GGFDLLCANAGVS   97 (263)
T ss_dssp             TCCCEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence             899999999965

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.82  E-value=7.2e-20  Score=146.04  Aligned_cols=140  Identities=18%  Similarity=0.225  Sum_probs=106.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|+||||||+||+++++.|+++|++|++++|+     +++.+.   +. .++.++.+|++|+++  +.+.++|+|||+|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~~~---~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   69 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN-----AGKITQ---TH-KDINILQKDIFDLTL--SDLSDQNVVVDAY   69 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----SHHHHH---HC-SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC-----chhhhh---cc-CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence            589999999999999999999999999999999     444332   21 578999999999887  7889999999999


Q ss_pred             CCcc------chhHHHHHHHHHHhCCcceeee-ccccCCC--------CccccCCCCchHHHHHHHHHHH--HH--HcCC
Q 044721           85 GHTL------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDV--------DRVHAVEPAKSAFATKAKIRRA--VE--AEGI  145 (263)
Q Consensus        85 ~~~~------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~--------~~~~~~~~~~~~~~~k~~~e~~--~~--~~~~  145 (263)
                      |...      +..++++++++.+.+ ++++++ ||.+...        .+..+..|...|..+|...|.+  ++  ..++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi  148 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEF  148 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTS
T ss_pred             cCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCc
Confidence            9863      456789999999998 888874 6543311        1223344556688889888876  66  6899


Q ss_pred             CEEEEeccCch
Q 044721          146 PYTYGDVLNHG  156 (263)
Q Consensus       146 ~~~~gr~~n~~  156 (263)
                      +|++.|..++.
T Consensus       149 ~~~ivrp~~v~  159 (221)
T 3ew7_A          149 SWTYISPSAMF  159 (221)
T ss_dssp             CEEEEECSSCC
T ss_pred             cEEEEeCccee
Confidence            99999977654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.82  E-value=9.3e-21  Score=157.52  Aligned_cols=180  Identities=17%  Similarity=0.167  Sum_probs=123.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-----------Ccchhhh-hhhh--ccCCcEEEEccCCCHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-----------APSKSQL-LDHF--KKLGVNLVIGDVLNHE   68 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~-~~~~--~~~~~~~~~~D~~~~~   68 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....           ..++.+. .+.+  ...++..+++|++|++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            478999999999999999999999999999999873210           0112221 1121  1356888999999999


Q ss_pred             HHHHHhc-------CcCEEEEcCCCccchh-----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHH
Q 044721           69 SLVKAIK-------QVDVVISTVGHTLLGD-----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        69 ~~~~~~~-------~~d~vv~~a~~~~~~~-----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~  136 (263)
                      +++++++       ++|+||||||......     ...-++...+.+                     ....+..++...
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~  148 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDIN---------------------LAGVWKTVKAGV  148 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHh---------------------hHHHHHHHHHHH
Confidence            9988776       7999999999753111     111122222221                     133455566666


Q ss_pred             HHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCc
Q 044721          137 RRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKS  216 (263)
Q Consensus       137 e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~  216 (263)
                      ..+.++..    .|+++|+++..             +..+......|..+|.+...+++.++.++++++|+||+|+||+.
T Consensus       149 ~~~~~~~~----~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v  211 (286)
T 3uve_A          149 PHMIAGGR----GGSIILTSSVG-------------GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHV  211 (286)
T ss_dssp             HHHHHHTS----CEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HHHHhCCC----CcEEEEECchh-------------hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence            66655431    25666655544             33344455677777777777889999999999999999999987


Q ss_pred             chhc
Q 044721          217 AFVT  220 (263)
Q Consensus       217 ~~~~  220 (263)
                      .++.
T Consensus       212 ~T~~  215 (286)
T 3uve_A          212 KTPM  215 (286)
T ss_dssp             SSTT
T ss_pred             cCCc
Confidence            7654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.82  E-value=8.9e-21  Score=155.06  Aligned_cols=158  Identities=19%  Similarity=0.163  Sum_probs=105.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|+++++..........+.+... ..++..+.+|++|.++++++++       
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999998844322111111111221 4568899999999999888776       


Q ss_pred             CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHH
Q 044721           76 QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFA  131 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~  131 (263)
                      ++|+||||||....                   ..    .+.+++.+.+.+ ..+++. ||.....    +..+...|..
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~~~Y~a  165 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK----GQFGQTNYST  165 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG----SCSCCHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc----CCCCCcccHH
Confidence            78999999997541                   11    233344444555 455553 4322111    1112445666


Q ss_pred             HHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccC
Q 044721          132 TKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAV  211 (263)
Q Consensus       132 ~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v  211 (263)
                      +|.+++.                                                      +.+.++.+++..++++|+|
T Consensus       166 sK~a~~~------------------------------------------------------~~~~la~e~~~~gi~v~~v  191 (256)
T 3ezl_A          166 AKAGIHG------------------------------------------------------FTMSLAQEVATKGVTVNTV  191 (256)
T ss_dssp             HHHHHHH------------------------------------------------------HHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHH------------------------------------------------------HHHHHHHHHHHhCCEEEEE
Confidence            6666665                                                      5555667788889999999


Q ss_pred             CCCCcchhc
Q 044721          212 EPAKSAFVT  220 (263)
Q Consensus       212 ~pg~~~~~~  220 (263)
                      +||...++.
T Consensus       192 ~PG~v~t~~  200 (256)
T 3ezl_A          192 SPGYIGTDM  200 (256)
T ss_dssp             EECSBCCHH
T ss_pred             EECcccCcc
Confidence            999876654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.82  E-value=5.3e-19  Score=149.55  Aligned_cols=142  Identities=21%  Similarity=0.338  Sum_probs=112.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.... .      +.+ ..++.++.+|++|.+++.++++  ++|+||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   72 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH-E------DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVM   72 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-G------GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc-h------hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            46899999999999999999999999999999875321 1      111 2368899999999999999998  999999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHHHHH
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~  138 (263)
                      |+|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..|.+.|..+|.++|.
T Consensus        73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  151 (330)
T 2c20_A           73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK  151 (330)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHH
Confidence            9999763               234678999999998 988884 54   3322    2445556678899999999999


Q ss_pred             HHHH----cCCCEEEEeccC
Q 044721          139 AVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       139 ~~~~----~~~~~~~gr~~n  154 (263)
                      +++.    .++++++.|..+
T Consensus       152 ~~~~~~~~~~~~~~ilrp~~  171 (330)
T 2c20_A          152 MLHWYSQASNLRYKIFRYFN  171 (330)
T ss_dssp             HHHHHHHTSSCEEEEEECSE
T ss_pred             HHHHHHHHhCCcEEEEecCc
Confidence            9864    488998888643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.82  E-value=1.9e-19  Score=145.80  Aligned_cols=138  Identities=18%  Similarity=0.176  Sum_probs=111.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |++|+++||||+|+||+++++.|+++|+  +|++++|++.....        ....++.++.+|++|++++.++++++|+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~d~   87 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--------EAYKNVNQEVVDFEKLDDYASAFQGHDV   87 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--------GGGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc--------cccCCceEEecCcCCHHHHHHHhcCCCE
Confidence            3568999999999999999999999999  99999998543211        0123578899999999999999999999


Q ss_pred             EEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           80 VISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        80 vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      ||||||...            +..+.++++++.+.+ ++++++ |+.+....      +...|..+|.++|.+++..+++
T Consensus        88 vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~------~~~~Y~~sK~~~e~~~~~~~~~  160 (242)
T 2bka_A           88 GFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS------SNFLYLQVKGEVEAKVEELKFD  160 (242)
T ss_dssp             EEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHHTTCCS
T ss_pred             EEECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC------CcchHHHHHHHHHHHHHhcCCC
Confidence            999999753            345678899999988 888874 66544321      2567999999999999999995


Q ss_pred             -EEEEeccC
Q 044721          147 -YTYGDVLN  154 (263)
Q Consensus       147 -~~~gr~~n  154 (263)
                       +++.|...
T Consensus       161 ~~~~vrpg~  169 (242)
T 2bka_A          161 RYSVFRPGV  169 (242)
T ss_dssp             EEEEEECCE
T ss_pred             CeEEEcCce
Confidence             88777654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.82  E-value=8.4e-21  Score=158.80  Aligned_cols=180  Identities=15%  Similarity=0.147  Sum_probs=121.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-------Ccchhh-hhhhh--ccCCcEEEEccCCCHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-------APSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~   72 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....       ..++.+ ..+.+  .+.++..+.+|++|++++++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            468999999999999999999999999999999874210       011111 11222  14568899999999999888


Q ss_pred             Hhc-------CcCEEEEcCCCccchh-----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           73 AIK-------QVDVVISTVGHTLLGD-----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        73 ~~~-------~~d~vv~~a~~~~~~~-----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +++       ++|+||||||......     ...-++...+.+                     ....+..++.....+.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~~~  165 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVN---------------------LNGAWITARVAIPHIM  165 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHH
Confidence            775       7999999999753111     111112222111                     1334455666665555


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++.+    .|+++|++|..             +..+......|..+|.+...+++.++.++++.+|+||+|+||+..++.
T Consensus       166 ~~~~----~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  228 (299)
T 3t7c_A          166 AGKR----GGSIVFTSSIG-------------GLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM  228 (299)
T ss_dssp             HTTS----CEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred             hcCC----CcEEEEECChh-------------hccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence            5432    25566555544             233344556677777777678888999999999999999999876654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.82  E-value=7.3e-19  Score=151.73  Aligned_cols=144  Identities=21%  Similarity=0.186  Sum_probs=112.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +||+||||||+|+||+++++.|+++|++|++++|+.....        .....++.++.+|++|.+++.++++++|+|||
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch--------hhccCCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            4679999999999999999999999999999999854321        01134688999999999999999999999999


Q ss_pred             cCCCcc----------------chhHHHHHHHHHHhCCcceeee-ccc---cCC---------CCccc--cCCCCchHHH
Q 044721           83 TVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SEF---GND---------VDRVH--AVEPAKSAFA  131 (263)
Q Consensus        83 ~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~~---g~~---------~~~~~--~~~~~~~~~~  131 (263)
                      +|+...                +..+.++++++.+.+ ++++|+ |+.   +..         .++..  +..|.+.|..
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~  178 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGL  178 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHH
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHH
Confidence            998643                223578999999998 988874 543   321         11222  4566788999


Q ss_pred             HHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          132 TKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       132 ~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +|.++|.+++    +.++++++.|..++
T Consensus       179 sK~~~E~~~~~~~~~~gi~~~ilrp~~v  206 (379)
T 2c5a_A          179 EKLATEELCKHYNKDFGIECRIGRFHNI  206 (379)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEeCce
Confidence            9999999885    35899998886654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.82  E-value=4.6e-20  Score=149.94  Aligned_cols=80  Identities=21%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.....  .++..+.+|++|+++++++++      
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREAAEA--VGAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT--TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHH--cCCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999998     4443322111  137889999999999888775      


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|+||||||...
T Consensus        76 g~id~lvn~Ag~~~   89 (245)
T 1uls_A           76 GRLDGVVHYAGITR   89 (245)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence             5899999999653

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.82  E-value=3.7e-19  Score=151.38  Aligned_cols=148  Identities=16%  Similarity=0.247  Sum_probs=111.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcC--cCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQ--VDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~--~d~v   80 (263)
                      ||+|||||||||||+++++.|+++|++|++++|+.........   ..+. ..++.++.+|++|++++++++++  +|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL---HWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH---HHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhh---hhhccCCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            3689999999999999999999999999999986421101111   2221 23588999999999999999987  9999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHhCCcc-eeee-cc---ccCC--------------------CCcc
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEAGNIK-RFFP-SE---FGND--------------------VDRV  120 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~~~~~-~~i~-S~---~g~~--------------------~~~~  120 (263)
                      ||+|+...               +..+.++++++.+.+ ++ ++|+ |+   |+..                    .++.
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~  156 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES  156 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence            99999753               234678999999998 86 7774 54   3321                    1223


Q ss_pred             ccCCCCchHHHHHHHHHHHHHH----cCCCEEEEeccCc
Q 044721          121 HAVEPAKSAFATKAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       121 ~~~~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      .+..+.+.|+.+|.++|.+++.    .++++++.|..++
T Consensus       157 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v  195 (347)
T 1orr_A          157 TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSM  195 (347)
T ss_dssp             SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCce
Confidence            3455678899999999999865    3899998886654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.82  E-value=6.2e-20  Score=152.37  Aligned_cols=138  Identities=20%  Similarity=0.219  Sum_probs=114.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC-cCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ-VDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~v   80 (263)
                      |++|+||||| +|+||+++++.|+++|++|++++|+....            ..++.++.+|++|.+++.+++++ +|+|
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~v   67 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEIL   67 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcCCCCEE
Confidence            4568999999 59999999999999999999999985321            35688999999999999999987 9999


Q ss_pred             EEcCCCcc----------chhHHHHHHHHHHhCCcceeee-cc---ccCCC----CccccCCCCchHHHHHHHHHHHHHH
Q 044721           81 ISTVGHTL----------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV----DRVHAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus        81 v~~a~~~~----------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~----~~~~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                      ||+|+...          +..+.++++++.+.+ ++++|+ |+   |+...    ++..+..|.+.|+.+|..+|++ ++
T Consensus        68 ih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~  145 (286)
T 3gpi_A           68 VYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LA  145 (286)
T ss_dssp             EECHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GG
T ss_pred             EEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hh
Confidence            99998642          456889999999888 899885 54   44322    4566677888999999999999 77


Q ss_pred             cCCCEEEEeccCc
Q 044721          143 EGIPYTYGDVLNH  155 (263)
Q Consensus       143 ~~~~~~~gr~~n~  155 (263)
                      . +++++.|..+.
T Consensus       146 ~-~~~~ilR~~~v  157 (286)
T 3gpi_A          146 A-YSSTILRFSGI  157 (286)
T ss_dssp             G-SSEEEEEECEE
T ss_pred             c-CCeEEEecccc
Confidence            7 99999987764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.82  E-value=6.5e-19  Score=146.37  Aligned_cols=136  Identities=21%  Similarity=0.248  Sum_probs=109.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |+|+||||||+||+++++.|++. |++|++++|++.     +..   .+...+++++.+|++|++++.++++++|+|||+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~-----~~~---~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE-----KVP---DDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGG-----GSC---GGGBTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHH-----HHH---HhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            57999999999999999999998 899999999943     321   223467999999999999999999999999999


Q ss_pred             CCCcc-----chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           84 VGHTL-----LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        84 a~~~~-----~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ++...     +..++++++++.+.+ ++++|+ |+++.....      ...+...+..++..+++.+++|++.|..++
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~------~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~  143 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNN------PFHMSPYFGYASRLLSTSGIDYTYVRMAMY  143 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTC------CSTTHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCC------CCccchhHHHHHHHHHHcCCCEEEEecccc
Confidence            99764     456789999999999 999985 777653322      112333445788888899999999996654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.82  E-value=4.5e-21  Score=159.95  Aligned_cols=173  Identities=12%  Similarity=0.089  Sum_probs=106.2

Q ss_pred             CCCCeEEEEcCCCh--hHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGY--IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+  ||+++++.|+++|++|++++|+     ....+.++.+.  ..++.++.+|++|+++++++++  
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG-----DALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS-----HHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHH
Confidence            35789999999976  9999999999999999999998     32222222211  2467889999999999988876  


Q ss_pred             -----CcCEEEEcCCCccc--------hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHH
Q 044721           76 -----QVDVVISTVGHTLL--------GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~--------~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                           ++|+||||||....        .....-++...+.+                     ....+..++.....+.+ 
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~m~~-  161 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLIS---------------------VYSLTAVSRRAEKLMAD-  161 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHTTT-
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHH---------------------HHHHHHHHHHHHHhccC-
Confidence                 79999999997631        00000011111110                     01122223333222211 


Q ss_pred             cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          143 EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       143 ~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                            .|+++|+++..             +..+......|..+|.+...+++.++.+|++.+|+||+|+||+..++.
T Consensus       162 ------~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  220 (293)
T 3grk_A          162 ------GGSILTLTYYG-------------AEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA  220 (293)
T ss_dssp             ------CEEEEEEECGG-------------GTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             ------CCEEEEEeehh-------------hccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence                  13444433332             122223334455555555557777888999999999999999876653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.81  E-value=1.2e-19  Score=148.40  Aligned_cols=79  Identities=18%  Similarity=0.274  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..     +.+..+.+.  + ..+++|++|+++++++++      
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----GKEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT-----HHHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999842     222223332  4 788999999998888765      


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|+||||||...
T Consensus        76 g~iD~lv~~Ag~~~   89 (256)
T 2d1y_A           76 GRVDVLVNNAAIAA   89 (256)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence             7899999999753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.81  E-value=3.8e-20  Score=152.74  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=64.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhcC------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIKQ------   76 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~------   76 (263)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.. .++..+.+|++|+++++++++.      
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRR-----EERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            789999999999999999999999999999998     4443322 22211 3678899999999999988864      


Q ss_pred             -cCEEEEcCCCc
Q 044721           77 -VDVVISTVGHT   87 (263)
Q Consensus        77 -~d~vv~~a~~~   87 (263)
                       +|+||||||..
T Consensus        97 ~iD~lvnnAG~~  108 (272)
T 2nwq_A           97 TLRGLINNAGLA  108 (272)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence             69999999964

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.81  E-value=1.6e-18  Score=147.01  Aligned_cols=147  Identities=19%  Similarity=0.306  Sum_probs=114.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC---C---CCEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcCc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA---G---HPTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      |+||||||||+||+++++.|+++   |   ++|++++|+.........   ..+. ..++.++.+|++|++++.+++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL---APVDADPRLRFVHGDIRDAGLLARELRGV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG---GGGTTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh---hhcccCCCeEEEEcCCCCHHHHHHHhcCC
Confidence            48999999999999999999997   8   999999997532112222   2221 356889999999999999999999


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~  134 (263)
                      |+|||+|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..+.+.|+.+|.
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKA  156 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHH
Confidence            99999999754               345689999999999 888884 54   4432    244455667889999999


Q ss_pred             HHHHHHHH----cCCCEEEEeccCc
Q 044721          135 KIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       135 ~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      ++|.+++.    .++++++.|..+.
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v  181 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNN  181 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeee
Confidence            99998853    5899998886653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.81  E-value=6.7e-20  Score=150.63  Aligned_cols=130  Identities=19%  Similarity=0.204  Sum_probs=87.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHh-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAI-----   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~-----   74 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+.  +.++..+.+|++|++++++++     
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN-----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999998     33322 112221  346888999999999888877     


Q ss_pred             ---cCcCEEEEcCCCccc-------------------hhHHHHHHHH----HHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           75 ---KQVDVVISTVGHTLL-------------------GDQVKIIAAI----KEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        75 ---~~~d~vv~~a~~~~~-------------------~~~~~l~~~~----~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                         .++|+||||||....                   ..+.++++++    .+.+ .+++|+ ||......    ..+..
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~  162 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS----ASVGS  162 (266)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC--------------CC
T ss_pred             HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccC----CCCCc
Confidence               578999999996531                   1223444444    5566 677774 55332111    12256


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+.+.
T Consensus       163 ~Y~~sK~a~~~~~~~  177 (266)
T 1xq1_A          163 IYSATKGALNQLARN  177 (266)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH
Confidence            788899888885543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.81  E-value=1.1e-20  Score=154.63  Aligned_cols=171  Identities=15%  Similarity=0.086  Sum_probs=108.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.+....+.++..+.+|++|+++++++++       
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN-----ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998     444433222224578899999999998887664       


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||||......    ...-.+...+.+                     ....+..++.....+ ++      -|+
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~~-~~------~g~  133 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVN---------------------TKGAFFTVQRLTPLI-RE------GGS  133 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHGGGE-EE------EEE
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHH-hc------CCE
Confidence            7899999999764111    011111111111                     011122222222110 00      134


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      ++|++|..             +..+..+...|..+|.+...+++.++.++++.+++||+|+||+..++
T Consensus       134 iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~  188 (255)
T 4eso_A          134 IVFTSSVA-------------DEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTP  188 (255)
T ss_dssp             EEEECCGG-------------GSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCS
T ss_pred             EEEECChh-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCc
Confidence            44433332             22223344455555555555777788899999999999999976654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.81  E-value=5.1e-19  Score=152.55  Aligned_cols=146  Identities=12%  Similarity=0.126  Sum_probs=112.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++|+|+||||+|+||+++++.|+++| ++|++++|+....    .+.+.  ...++.++.+|++|++++.++++++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~----~~~l~--~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE----KINVP--DHPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC----GGGSC--CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc----hhhcc--CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            45789999999999999999999999 9999999985321    11111  13568899999999999999999999999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHh-CCcceeee-ccc---cCC----CC--ccc---cC-CCCchHHH
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEA-GNIKRFFP-SEF---GND----VD--RVH---AV-EPAKSAFA  131 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~-~~~~~~i~-S~~---g~~----~~--~~~---~~-~~~~~~~~  131 (263)
                      |+|+...               +..+.++++++.+. + ++++|+ |+.   +..    .+  +..   +. .|...|..
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~  183 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSM  183 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC--------------CCCCCCCSSCCCSHHHH
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHH
Confidence            9999764               23468899999888 8 888884 543   321    12  333   44 66788999


Q ss_pred             HHHHHHHHHHH----cCCCEEEEeccCc
Q 044721          132 TKAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       132 ~k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      +|.++|.+++.    .++++++.|..++
T Consensus       184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v  211 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQHQLPTVRARFQNV  211 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccE
Confidence            99999999864    4899998886654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.81  E-value=1.3e-20  Score=154.74  Aligned_cols=179  Identities=13%  Similarity=0.081  Sum_probs=121.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..     +.+ ..+.+ +.++.++.+|++|+++++++++     
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS-----GGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS-----SHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcH-----hHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999843     222 22222 4578899999999999988887     


Q ss_pred             --CcCEEEEcCCCccch----------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           76 --QVDVVISTVGHTLLG----------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~----------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                        ++|+||||||.....          ....-.+...+.+                     ....+...+.....+.++.
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N---------------------~~~~~~l~~~~~~~~~~~~  142 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN---------------------LMGTFNVIRLVAGEMGQNE  142 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHTTSC
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhcc
Confidence              899999999975311          0111111111111                     1233444555554443321


Q ss_pred             CC-CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          144 GI-PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       144 ~~-~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .. .-..++++++++....             .+......|..+|.+...+.+.++.++++.++++|+|.||+..++.
T Consensus       143 ~~~~~~~~~iv~isS~~~~-------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  207 (265)
T 2o23_A          143 PDQGGQRGVIINTASVAAF-------------EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL  207 (265)
T ss_dssp             CCTTSCCEEEEEECCTHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred             cccCCCCcEEEEeCChhhc-------------CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence            00 0003666666555432             1233456799999998889999999999999999999999876654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.81  E-value=8.6e-20  Score=150.69  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHh-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAI-----   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~-----   74 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.  +.++..+.+|++|++++++++     
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     333321 12221  346888999999999988877     


Q ss_pred             ---cCcCEEEEcCCCc
Q 044721           75 ---KQVDVVISTVGHT   87 (263)
Q Consensus        75 ---~~~d~vv~~a~~~   87 (263)
                         .++|+||||||..
T Consensus        95 ~~~g~id~lv~nAg~~  110 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVV  110 (273)
T ss_dssp             HTTSCCCEEEECCCCC
T ss_pred             HcCCCCcEEEECCCCC
Confidence               5799999999975

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.81  E-value=9e-20  Score=150.40  Aligned_cols=82  Identities=16%  Similarity=0.248  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..    ++.+ ..+.+.  +.++..+.+|++|+++++++++    
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA----ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999987632    2222 112221  4568889999999999988876    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|+||||||...
T Consensus       106 ~~g~iD~lvnnAg~~~  121 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWH  121 (271)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HcCCCcEEEECCCCCC
Confidence               7999999999753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.81  E-value=2.8e-20  Score=154.67  Aligned_cols=174  Identities=19%  Similarity=0.210  Sum_probs=112.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEEcCCCCCCcchhhhh-hhh----ccCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLL-DHF----KKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ++|+++||||+|+||+++++.|+++|+   +|++++|+     .++.+.+ +.+    .+.++.++.+|++|++++++++
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-----LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            468999999999999999999999997   89999998     4333322 222    1345788999999999999887


Q ss_pred             c-------CcCEEEEcCCCcc-c----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHH
Q 044721           75 K-------QVDVVISTVGHTL-L----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus        75 ~-------~~d~vv~~a~~~~-~----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                      +       ++|+||||||... .    +....-++...+.+                     ....+..++..+..+.++
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~  165 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTN---------------------VTALINITQAVLPIFQAK  165 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHhc
Confidence            6       5899999999653 0    00011111111111                     122333444444443333


Q ss_pred             cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          143 EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       143 ~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .+     |+++|++|..             +..+..+...|..+|.+...+++.++.+|++.+|+||+|+||...++.
T Consensus       166 ~~-----g~IV~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          166 NS-----GDIVNLGSIA-------------GRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             TC-----CEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             CC-----CeEEEECChh-------------hcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence            22     3444443333             222333344555555555557778889999999999999999876654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.81  E-value=5.2e-20  Score=149.83  Aligned_cols=74  Identities=27%  Similarity=0.336  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+...     .+        .+..+.+|++|+++++++++      
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~--------~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-----PK--------GLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----CT--------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH-----HH--------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999998432     11        11237899999999888775      


Q ss_pred             -CcCEEEEcCCCcc
Q 044721           76 -QVDVVISTVGHTL   88 (263)
Q Consensus        76 -~~d~vv~~a~~~~   88 (263)
                       ++|+||||||...
T Consensus        80 g~id~lv~~Ag~~~   93 (247)
T 1uzm_A           80 GPVEVLVSNAGLSA   93 (247)
T ss_dssp             SSCSEEEEECSCCC
T ss_pred             CCCCEEEECCCCCC
Confidence             6899999999753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.81  E-value=1.1e-18  Score=141.89  Aligned_cols=143  Identities=20%  Similarity=0.267  Sum_probs=112.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +++|+|+||||+|+||++++++|+++  |++|++++|+     +.+.+   .+ ..++.++.+|++|++++.++++++|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~-----~~~~~---~~-~~~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKE---KI-GGEADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC-----HHHHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC-----CCchh---hc-CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence            56789999999999999999999999  8999999998     43332   12 35678999999999999999999999


Q ss_pred             EEEcCCCcc----------------------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCC--Cch
Q 044721           80 VISTVGHTL----------------------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEP--AKS  128 (263)
Q Consensus        80 vv~~a~~~~----------------------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~--~~~  128 (263)
                      |||+||...                            +..+.++++++.+.+ ++++|+ |+.+... +..+..+  ...
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~-~~~~~~~~~~~~  150 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTN-PDHPLNKLGNGN  150 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTC-TTCGGGGGGGCC
T ss_pred             EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCC-CCCccccccchh
Confidence            999998542                            234689999999999 888885 6654321 1112221  134


Q ss_pred             HHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721          129 AFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus       129 ~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      |..+|..+|.++++.++++++.|..++
T Consensus       151 y~~sK~~~e~~~~~~~i~~~~vrpg~v  177 (253)
T 1xq6_A          151 ILVWKRKAEQYLADSGTPYTIIRAGGL  177 (253)
T ss_dssp             HHHHHHHHHHHHHTSSSCEEEEEECEE
T ss_pred             HHHHHHHHHHHHHhCCCceEEEeccee
Confidence            777999999999999999998886654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.81  E-value=1.4e-19  Score=149.57  Aligned_cols=155  Identities=14%  Similarity=0.241  Sum_probs=109.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhcc-CCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKK-LGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+ ..+.+.. .++.++.+|++|+++++++++     
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD-----AEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999998     33332 2222211 267888999999999888775     


Q ss_pred             --CcCEEEEcCCCccc-------------------hhH----HHHHHHHHHhCCc----ceeee-ccccCCCCccccCCC
Q 044721           76 --QVDVVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNI----KRFFP-SEFGNDVDRVHAVEP  125 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~----~~~i~-S~~g~~~~~~~~~~~  125 (263)
                        ++|+||||||....                   ..+    +.+++.+.+.+ .    +++|. ||......    ...
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~----~~~  177 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISA----MGE  177 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCC----CCC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCC----CCC
Confidence              79999999996431                   111    34444555555 4    66663 54332111    111


Q ss_pred             Cc-hHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCC
Q 044721          126 AK-SAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGND  204 (263)
Q Consensus       126 ~~-~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (263)
                      .. .|..+|.+++.+                                                      ++.++.++++.
T Consensus       178 ~~~~Y~asK~a~~~~------------------------------------------------------~~~la~e~~~~  203 (276)
T 2b4q_A          178 QAYAYGPSKAALHQL------------------------------------------------------SRMLAKELVGE  203 (276)
T ss_dssp             SCTTHHHHHHHHHHH------------------------------------------------------HHHHHHHHGGG
T ss_pred             CccccHHHHHHHHHH------------------------------------------------------HHHHHHHhccc
Confidence            33 688888888774                                                      44455678888


Q ss_pred             ccccccCCCCCcchhcH
Q 044721          205 VDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       205 ~~~vn~v~pg~~~~~~~  221 (263)
                      ++++|+|+||...++..
T Consensus       204 gI~vn~v~PG~v~T~~~  220 (276)
T 2b4q_A          204 HINVNVIAPGRFPSRMT  220 (276)
T ss_dssp             TEEEEEEEECCCCSTTT
T ss_pred             CeEEEEEEeccCcCcch
Confidence            99999999998776653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=2.1e-19  Score=146.15  Aligned_cols=154  Identities=17%  Similarity=0.169  Sum_probs=106.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh---cCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI---KQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d   78 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.+..+  .++..+.+|++|++++++++   .++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id   76 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEKY--PGIQTRVLDVTKKKQIDQFANEVERLD   76 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGGGGS--TTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHhc--cCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999998     4444322222  26788999999999888764   4799


Q ss_pred             EEEEcCCCccc-------------------hhH----HHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHH
Q 044721           79 VVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        79 ~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~  134 (263)
                      +||||||....                   ...    +.+++.+.+.+ .+++|. ||.......   ..+...|..+|.
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~~~~~~Y~~sK~  152 (246)
T 2ag5_A           77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG---VVNRCVYSTTKA  152 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---CTTBHHHHHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCC---CCCCccHHHHHH
Confidence            99999997531                   111    22233333445 556653 443221110   002445666777


Q ss_pred             HHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCC
Q 044721          135 KIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPA  214 (263)
Q Consensus       135 ~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg  214 (263)
                      +++.                                                      +++.++.++++.++++|+|+||
T Consensus       153 a~~~------------------------------------------------------~~~~la~e~~~~gi~v~~v~Pg  178 (246)
T 2ag5_A          153 AVIG------------------------------------------------------LTKSVAADFIQQGIRCNCVCPG  178 (246)
T ss_dssp             HHHH------------------------------------------------------HHHHHHHHHGGGTEEEEEEEES
T ss_pred             HHHH------------------------------------------------------HHHHHHHHhhhcCcEEEEEeeC
Confidence            6666                                                      4455567788889999999999


Q ss_pred             Ccchhc
Q 044721          215 KSAFVT  220 (263)
Q Consensus       215 ~~~~~~  220 (263)
                      ...++.
T Consensus       179 ~v~t~~  184 (246)
T 2ag5_A          179 TVDTPS  184 (246)
T ss_dssp             CEECHH
T ss_pred             cCcCcc
Confidence            876654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.81  E-value=1.4e-20  Score=155.39  Aligned_cols=84  Identities=17%  Similarity=0.219  Sum_probs=64.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++++++||||+|+||++++++|+++|++|+++.+..    .+..+. .+.+.  ..++..+.+|++|+++++++++  
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN----REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV   98 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            44578999999999999999999999999998874432    333221 12221  3468889999999999888776  


Q ss_pred             -----CcCEEEEcCCCcc
Q 044721           76 -----QVDVVISTVGHTL   88 (263)
Q Consensus        76 -----~~d~vv~~a~~~~   88 (263)
                           ++|+||||||...
T Consensus        99 ~~~~g~id~li~nAg~~~  116 (272)
T 4e3z_A           99 DRQFGRLDGLVNNAGIVD  116 (272)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHhCCCCCEEEECCCCCC
Confidence                 7899999999753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.81  E-value=2.5e-20  Score=153.96  Aligned_cols=175  Identities=13%  Similarity=0.133  Sum_probs=113.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCc--chhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP--SKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+......  +..+ ..+.+  .+.++..+.+|++|+++++++++ 
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            467999999999999999999999999999999998643211  0111 11111  14567889999999999888775 


Q ss_pred             ------CcCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            ++|++|||||.....    ....-++...+.+                     ....+..++.....+.++.+ 
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~~-  141 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN---------------------ARGSFVCAQACLPHLLQAPN-  141 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHT---------------------HHHHHHHHHHHHHHHTTSSS-
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHh---------------------hHhHHHHHHHHHHHHHhcCC-
Confidence                  799999999975311    1111111111111                     12334445554444333222 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCccc--chhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTL--LADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                          |+++|+++..             +..+  ......|..+|.+...+++.++.++++++|+||+|+||+
T Consensus       142 ----g~iv~isS~~-------------~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~  196 (274)
T 3e03_A          142 ----PHILTLAPPP-------------SLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRT  196 (274)
T ss_dssp             ----CEEEECCCCC-------------CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSB
T ss_pred             ----ceEEEECChH-------------hcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCc
Confidence                3444433322             1111  334456777777766688888999999999999999994

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=1.2e-18  Score=150.05  Aligned_cols=149  Identities=20%  Similarity=0.236  Sum_probs=111.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-h---ccCCcEEEEccCCCHHHHHHHhcC--cC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F---KKLGVNLVIGDVLNHESLVKAIKQ--VD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~~~~D~~~~~~~~~~~~~--~d   78 (263)
                      |+||||||+|+||+++++.|+++|++|++++|+.......+.+.+.. .   ...++.++.+|++|++++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999854321111211100 0   134688899999999999999985  69


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCc---ceeee-cc---ccCC----CCccccCCCCchHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNI---KRFFP-SE---FGND----VDRVHAVEPAKSAFAT  132 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~---~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~  132 (263)
                      +|||+||...               +..+.++++++.+.+ +   +++|+ |+   |+..    .+++.+..|.+.|+.+
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  183 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  183 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence            9999999754               234578999999988 7   78774 54   3321    2444556677899999


Q ss_pred             HHHHHHHHHH----cCCCEEEEeccC
Q 044721          133 KAKIRRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       133 k~~~e~~~~~----~~~~~~~gr~~n  154 (263)
                      |.++|.+++.    .++++++.|+.+
T Consensus       184 K~~~e~~~~~~~~~~~~~~~i~r~~~  209 (375)
T 1t2a_A          184 KLYAYWIVVNFREAYNLFAVNGILFN  209 (375)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeccc
Confidence            9999998854    489999888765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.81  E-value=6.5e-19  Score=142.31  Aligned_cols=143  Identities=21%  Similarity=0.284  Sum_probs=106.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +||+|+||||+|+||+++++.|+++| ++|++++|++.     +.+   .+...++.++++|++|+++++++++++|+||
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~-----~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv   93 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPA-----KIH---KPYPTNSQIIMGDVLNHAALKQAMQGQDIVY   93 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG-----GSC---SSCCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh-----hhc---ccccCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence            46789999999999999999999999 89999999843     221   1224578999999999999999999999999


Q ss_pred             EcCCCccc-hhHHHHHHHHHHhCCcceeee-ccccCCCCcccc-----CCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           82 STVGHTLL-GDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHA-----VEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        82 ~~a~~~~~-~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~-----~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ||++.... ..++++++++.+.+ ++++|+ |+.+........     ......+...+..++..++..++++++.|...
T Consensus        94 ~~a~~~~~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~  172 (236)
T 3qvo_A           94 ANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAW  172 (236)
T ss_dssp             EECCSTTHHHHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECE
T ss_pred             EcCCCCchhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence            99997653 34678999999999 999884 664432211100     00112334566677888889999999888653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.81  E-value=5.3e-19  Score=148.41  Aligned_cols=140  Identities=20%  Similarity=0.256  Sum_probs=111.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+||||||||+||+++++.|+++|++|++++|++....        .....++.++.+|+.|.+ +.+++++ |+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR--------EFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG--------GGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch--------hhcCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence            58999999999999999999999999999999854321        111457899999999998 8888888 9999999


Q ss_pred             CCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHHHHHHHH
Q 044721           85 GHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        85 ~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      +...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..|.+.|+.+|.++|.+++
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            9642               345689999999999 988884 54   4332    2445666778999999999999885


Q ss_pred             H----cCCCEEEEeccCc
Q 044721          142 A----EGIPYTYGDVLNH  155 (263)
Q Consensus       142 ~----~~~~~~~gr~~n~  155 (263)
                      .    .++++++.|..+.
T Consensus       150 ~~~~~~g~~~~~lrp~~v  167 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANV  167 (312)
T ss_dssp             HHHHHHCCEEEEEEECEE
T ss_pred             HHHHHhCCCEEEEeeccc
Confidence            4    5899998886654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=1.4e-18  Score=147.41  Aligned_cols=148  Identities=19%  Similarity=0.337  Sum_probs=109.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+||||||+|+||+++++.|+++|++|++++|..... ....+.+....+.++.++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcc-hhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            4899999999999999999999999999998764321 122222222223467889999999999999887  5999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCC-CchHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEP-AKSAFATKAKIRR  138 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~-~~~~~~~k~~~e~  138 (263)
                      +||...               +..+.++++++.+.+ ++++|+ |+   |+..    .++..+..+ ...|..+|.++|.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~  158 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence            999653               234578899998888 888884 54   3321    123333333 6789999999999


Q ss_pred             HHHH----c-CCCEEEEeccC
Q 044721          139 AVEA----E-GIPYTYGDVLN  154 (263)
Q Consensus       139 ~~~~----~-~~~~~~gr~~n  154 (263)
                      +++.    . ++++++.|+.|
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~  179 (338)
T 1udb_A          159 ILTDLQKAQPDWSIALLRYFN  179 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEECE
T ss_pred             HHHHHHHhcCCCceEEEeece
Confidence            8864    3 78898888654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.80  E-value=6.6e-20  Score=150.30  Aligned_cols=154  Identities=16%  Similarity=0.156  Sum_probs=105.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+.  +.++..+.+|++|+++++++++    
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK-----QENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     33322 122221  3467889999999999888776    


Q ss_pred             ---CcCEEEEcCCCcc--------------------chhH----HHHHHHHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ---QVDVVISTVGHTL--------------------LGDQ----VKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ---~~d~vv~~a~~~~--------------------~~~~----~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                         ++|+||||||...                    +..+    +.+++.+.+.+ .+++|. ||.....    +..+..
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~~  162 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYH----PFPNLG  162 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS----CCTTBH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcC----CCCCch
Confidence               7999999999642                    0111    22333344445 555553 4432211    111244


Q ss_pred             hHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccc
Q 044721          128 SAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDR  207 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (263)
                      .|..+|.+++.                                                      +++.++.++++.+++
T Consensus       163 ~Y~~sK~a~~~------------------------------------------------------~~~~la~e~~~~gi~  188 (260)
T 2zat_A          163 PYNVSKTALLG------------------------------------------------------LTKNLAVELAPRNIR  188 (260)
T ss_dssp             HHHHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTEE
T ss_pred             hHHHHHHHHHH------------------------------------------------------HHHHHHHHhcccCeE
Confidence            56666666666                                                      555566778888999


Q ss_pred             cccCCCCCcchhc
Q 044721          208 VNAVEPAKSAFVT  220 (263)
Q Consensus       208 vn~v~pg~~~~~~  220 (263)
                      +|+|+||...++.
T Consensus       189 v~~v~Pg~v~t~~  201 (260)
T 2zat_A          189 VNCLAPGLIKTNF  201 (260)
T ss_dssp             EEEEEECSBCSST
T ss_pred             EEEEEECcccCcc
Confidence            9999999876654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.80  E-value=4.8e-19  Score=145.61  Aligned_cols=140  Identities=15%  Similarity=0.088  Sum_probs=113.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ||+|+||||||+||+++++.|+++|++|++++|+....    .       ..++.++.+|++|++++.++++++|+|||+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~-------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   70 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----A-------EAHEEIVACDLADAQAVHDLVKDCDGIIHL   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----C-------CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----c-------CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence            47899999999999999999999999999999985321    0       135688899999999999999999999999


Q ss_pred             CCCcc-----------chhHHHHHHHHHHhCCcceeee-ccc---cCC-----CCccccCCCCchHHHHHHHHHHHHH--
Q 044721           84 VGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SEF---GND-----VDRVHAVEPAKSAFATKAKIRRAVE--  141 (263)
Q Consensus        84 a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~~---g~~-----~~~~~~~~~~~~~~~~k~~~e~~~~--  141 (263)
                      |+...           +..+.++++++.+.+ ++++++ |+.   +..     .++..+..|...|..+|.++|.+++  
T Consensus        71 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  149 (267)
T 3ay3_A           71 GGVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLY  149 (267)
T ss_dssp             CSCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            98752           334688999999988 888884 543   221     2445556677899999999999885  


Q ss_pred             --HcCCCEEEEeccCc
Q 044721          142 --AEGIPYTYGDVLNH  155 (263)
Q Consensus       142 --~~~~~~~~gr~~n~  155 (263)
                        +.++++++.|..+.
T Consensus       150 ~~~~gi~~~~lrp~~v  165 (267)
T 3ay3_A          150 YHKFDIETLNIRIGSC  165 (267)
T ss_dssp             HHTTCCCEEEEEECBC
T ss_pred             HHHcCCCEEEEeceee
Confidence              45899999987764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.80  E-value=3.7e-19  Score=145.15  Aligned_cols=131  Identities=18%  Similarity=0.214  Sum_probs=92.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCc-EEEEccCCCHHHHHHHh------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGV-NLVIGDVLNHESLVKAI------   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~-~~~~~D~~~~~~~~~~~------   74 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.. +.+ +.++ ..+.+|++|++++++++      
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDRE-----AAALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAV   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence            46799999999999999999999999999999998     4333322 222 3345 78999999999988876      


Q ss_pred             cCcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHH
Q 044721           75 KQVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~  130 (263)
                      .++|+||||||....                   ..    .+.+++.+.+.+ .+++++ ||......  .+..+...|.
T Consensus        84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~~~~Y~  160 (254)
T 2wsb_A           84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIV--NRPQFASSYM  160 (254)
T ss_dssp             SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CSSSCBHHHH
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccC--CCCCcchHHH
Confidence            479999999996531                   11    234455566667 777774 55332211  1122236788


Q ss_pred             HHHHHHHHHHHH
Q 044721          131 ATKAKIRRAVEA  142 (263)
Q Consensus       131 ~~k~~~e~~~~~  142 (263)
                      .+|.+++.+.+.
T Consensus       161 ~sK~a~~~~~~~  172 (254)
T 2wsb_A          161 ASKGAVHQLTRA  172 (254)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            899988886543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.80  E-value=1.7e-18  Score=146.85  Aligned_cols=142  Identities=20%  Similarity=0.186  Sum_probs=109.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   80 (263)
                      +||+||||||+|+||+++++.|+++|++|++++|+....    .+.+..+  .++.++.+|++|++++.+++++  +|+|
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~D~v   93 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR----REHLKDH--PNLTFVEGSIADHALVNQLIGDLQPDAV   93 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC----GGGSCCC--TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc----hhhHhhc--CCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence            468999999999999999999999999999999985321    1111111  4688899999999999999987  9999


Q ss_pred             EEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCC----------CccccCCCC-chHHHHHHHH
Q 044721           81 ISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDV----------DRVHAVEPA-KSAFATKAKI  136 (263)
Q Consensus        81 v~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~----------~~~~~~~~~-~~~~~~k~~~  136 (263)
                      ||+||...            +..+.++++++.+.+ ++++|+ |+.+...          ++..  .|. ..|..+|.++
T Consensus        94 ih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~--~p~~~~Y~~sK~~~  170 (333)
T 2q1w_A           94 VHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPR--NPANSSYAISKSAN  170 (333)
T ss_dssp             EECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCC--CCTTCHHHHHHHHH
T ss_pred             EECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCC--CCCCCchHHHHHHH
Confidence            99999754            245688999999998 888884 5432211          1111  455 7899999999


Q ss_pred             HHHHHH-cCCCEEEEeccC
Q 044721          137 RRAVEA-EGIPYTYGDVLN  154 (263)
Q Consensus       137 e~~~~~-~~~~~~~gr~~n  154 (263)
                      |.+++. .. ++++.|..+
T Consensus       171 E~~~~~s~~-~~~ilR~~~  188 (333)
T 2q1w_A          171 EDYLEYSGL-DFVTFRLAN  188 (333)
T ss_dssp             HHHHHHHTC-CEEEEEESE
T ss_pred             HHHHHhhhC-CeEEEeece
Confidence            999988 66 888888654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.80  E-value=7.4e-19  Score=145.77  Aligned_cols=138  Identities=14%  Similarity=0.152  Sum_probs=111.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+|+|||| |+||+++++.|+++|++|++++|+     +.+..   .+...+++++.+|++|.+     +.++|+|||+
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~-----~~~~~---~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~   70 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN-----PDQME---AIRASGAEPLLWPGEEPS-----LDGVTHLLIS   70 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESC-----GGGHH---HHHHTTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcC-----hhhhh---hHhhCCCeEEEecccccc-----cCCCCEEEEC
Confidence            479999998 999999999999999999999998     33332   222357899999999944     7899999999


Q ss_pred             CCCcc--chhHHHHHHHHHH--hCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHHHHHHHHHc-CCCEEEE
Q 044721           84 VGHTL--LGDQVKIIAAIKE--AGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIRRAVEAE-GIPYTYG  150 (263)
Q Consensus        84 a~~~~--~~~~~~l~~~~~~--~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~~~~-~~~~~~g  150 (263)
                      |+...  ...+.++++++.+  .+ ++++|+ |+   |+..    .++..+..|.+.|+.+|..+|+++++. ++++++.
T Consensus        71 a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~il  149 (286)
T 3ius_A           71 TAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVF  149 (286)
T ss_dssp             CCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred             CCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEE
Confidence            99764  2346789999988  67 888885 54   3332    245567778889999999999999998 9999999


Q ss_pred             eccCch
Q 044721          151 DVLNHG  156 (263)
Q Consensus       151 r~~n~~  156 (263)
                      |..+..
T Consensus       150 Rp~~v~  155 (286)
T 3ius_A          150 RLAGIY  155 (286)
T ss_dssp             EECEEE
T ss_pred             eccceE
Confidence            977654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.80  E-value=1.9e-19  Score=146.54  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=66.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|+++.+++.++++   ++|+
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN-----EEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            57899999999999999999999999999999998     544443332224578899999999999998887   7899


Q ss_pred             EEEcCCCcc
Q 044721           80 VISTVGHTL   88 (263)
Q Consensus        80 vv~~a~~~~   88 (263)
                      +|||||...
T Consensus        88 li~~Ag~~~   96 (249)
T 3f9i_A           88 LVCNAGITS   96 (249)
T ss_dssp             EEECCC---
T ss_pred             EEECCCCCC
Confidence            999999753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.80  E-value=1.1e-18  Score=147.03  Aligned_cols=140  Identities=16%  Similarity=0.280  Sum_probs=109.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   80 (263)
                      +.|+||||||+|+||+++++.|+++|++|++++|+...     ..    +   ++.++.+|++|++++.+++++  +|+|
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-----KL----P---NVEMISLDIMDSQRVKKVISDIKPDYI   78 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-----CC----T---TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-----cc----c---eeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            35789999999999999999999999999999998532     10    1   578899999999999999985  9999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHh-CCcceeee-cc---ccCC------CCccccCCCCchHHHHHH
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEA-GNIKRFFP-SE---FGND------VDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~-~~~~~~i~-S~---~g~~------~~~~~~~~~~~~~~~~k~  134 (263)
                      ||+|+...               +..+.++++++.+. + ++++|+ ||   |+..      .+++.+..|.+.|..+|.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (321)
T 2pk3_A           79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKA  157 (321)
T ss_dssp             EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHH
T ss_pred             EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHH
Confidence            99999754               23467899999776 6 788874 54   3332      234445567889999999


Q ss_pred             HHHHHHHHc----CCCEEEEeccCc
Q 044721          135 KIRRAVEAE----GIPYTYGDVLNH  155 (263)
Q Consensus       135 ~~e~~~~~~----~~~~~~gr~~n~  155 (263)
                      ++|.+++..    ++++++.|..+.
T Consensus       158 ~~E~~~~~~~~~~gi~~~ilrp~~v  182 (321)
T 2pk3_A          158 SVGMLARQYVKAYGMDIIHTRTFNH  182 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHcCCCEEEEEeCcc
Confidence            999998654    899988886653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.80  E-value=5.3e-20  Score=149.65  Aligned_cols=81  Identities=14%  Similarity=0.119  Sum_probs=64.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccC--CCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDV--LNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~--~~~~~~~~~~~   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+   ...++.++.+|+  +|.++++++++
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT-----EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC-----HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            357899999999999999999999999999999998     433332 1222   225677788887  88888877665


Q ss_pred             -------CcCEEEEcCCCc
Q 044721           76 -------QVDVVISTVGHT   87 (263)
Q Consensus        76 -------~~d~vv~~a~~~   87 (263)
                             ++|+||||||..
T Consensus        87 ~~~~~~g~id~lv~nAg~~  105 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASII  105 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCC
T ss_pred             HHHHhCCCCCEEEECCccC
Confidence                   799999999974

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.80  E-value=1.7e-19  Score=149.65  Aligned_cols=157  Identities=17%  Similarity=0.142  Sum_probs=109.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..    ...+ ..+.+.  +.++..+.+|++|.++++++++   
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST----ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999842    1111 112221  3468889999999998877764   


Q ss_pred             ----CcCEEEEcCCCcc-------------------chhHHHHHHHHHHh--CCcceee-eccccCCCCccccCCCCchH
Q 044721           76 ----QVDVVISTVGHTL-------------------LGDQVKIIAAIKEA--GNIKRFF-PSEFGNDVDRVHAVEPAKSA  129 (263)
Q Consensus        76 ----~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~--~~~~~~i-~S~~g~~~~~~~~~~~~~~~  129 (263)
                          ++|+||||||...                   +..+.++++++...  + .+++| +||.......   ..+...|
T Consensus       103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~---~~~~~~Y  178 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKA---VPKHAVY  178 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSS---CSSCHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCC---CCCCcch
Confidence                7899999999753                   12234555555554  4 45665 3443221110   0114567


Q ss_pred             HHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccc
Q 044721          130 FATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN  209 (263)
Q Consensus       130 ~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn  209 (263)
                      ..+|.+++.                                                      +++.++.++++.+++||
T Consensus       179 ~asK~a~~~------------------------------------------------------~~~~la~e~~~~gi~v~  204 (283)
T 1g0o_A          179 SGSKGAIET------------------------------------------------------FARCMAIDMADKKITVN  204 (283)
T ss_dssp             HHHHHHHHH------------------------------------------------------HHHHHHHHHGGGTCEEE
T ss_pred             HHHHHHHHH------------------------------------------------------HHHHHHHHhcccCeEEE
Confidence            778877776                                                      44555677888899999


Q ss_pred             cCCCCCcchhc
Q 044721          210 AVEPAKSAFVT  220 (263)
Q Consensus       210 ~v~pg~~~~~~  220 (263)
                      +|+||...++.
T Consensus       205 ~v~PG~v~t~~  215 (283)
T 1g0o_A          205 VVAPGGIKTDM  215 (283)
T ss_dssp             EEEECCBSSHH
T ss_pred             EEecCcccchh
Confidence            99999877654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.80  E-value=2.8e-20  Score=156.88  Aligned_cols=181  Identities=17%  Similarity=0.156  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-------Ccchhh-hhhhh--ccCCcEEEEccCCCHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-------APSKSQ-LLDHF--KKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~   71 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+....       ..++.+ ..+.+  .+.++..+.+|++|+++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            3568999999999999999999999999999998863211       011111 11111  1456889999999999988


Q ss_pred             HHhc-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           72 KAIK-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      ++++       ++|+||||||......    ...-++...+.+                     ....+..++.....+.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~  182 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTN---------------------LIGAWHACRAVLPSMI  182 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHH
Confidence            8776       7999999999764111    111111111111                     1233445555555555


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++..    .|+++|++|..             +..+..+...|..+|.+...+++.++.+|++.+|+||+|+||...++.
T Consensus       183 ~~~~----~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          183 ERGQ----GGSVIFVSSTV-------------GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             HTCS----CEEEEEECCGG-------------GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             HcCC----CCEEEEECcHH-------------hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence            4421    15555554443             223334455677777776668888889999999999999999877654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.80  E-value=2.8e-19  Score=144.22  Aligned_cols=129  Identities=16%  Similarity=0.173  Sum_probs=92.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.+.... .++..+.+|++|+++++++++       
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARD-----EKRLQALAAEL-EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999998     44333222111 268889999999998887765       


Q ss_pred             CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHH
Q 044721           76 QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFA  131 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~  131 (263)
                      ++|+||||||....                   ..    .+.+++.+.+.+ .+++++ ||.....    +..+...|..
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~----~~~~~~~Y~~  152 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKN----PFKGGAAYNA  152 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTS----CCTTCHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcC----CCCCCchhhH
Confidence            78999999996431                   11    235556666666 777774 5543321    1223567888


Q ss_pred             HHHHHHHHHHH
Q 044721          132 TKAKIRRAVEA  142 (263)
Q Consensus       132 ~k~~~e~~~~~  142 (263)
                      +|.+++.+.+.
T Consensus       153 sK~a~~~~~~~  163 (234)
T 2ehd_A          153 SKFGLLGLAGA  163 (234)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99988876543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=1.2e-18  Score=144.38  Aligned_cols=134  Identities=20%  Similarity=0.266  Sum_probs=108.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            6 KILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+||||||+||+++++.|+++  |++|++++|++..     .+   .+...++.++.+|++|++++.++++++|+|||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK-----AQ---ALAAQGITVRQADYGDEAALTSALQGVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----CH---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh-----hh---hhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            5899999999999999999998  9999999998432     21   112346889999999999999999999999999


Q ss_pred             CCCc---cchhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           84 VGHT---LLGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        84 a~~~---~~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      |+..   .+..++++++++.+.+ ++++++ |+.+.. .     . ...|..+|..+|+++++.++++++.|...+
T Consensus        73 a~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~-----~-~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~  140 (286)
T 2zcu_A           73 SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD-T-----S-PLGLADEHIETEKMLADSGIVYTLLRNGWY  140 (286)
T ss_dssp             C--------CHHHHHHHHHHHHT-CCEEEEEEETTTT-T-----C-CSTTHHHHHHHHHHHHHHCSEEEEEEECCB
T ss_pred             CCCCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-C-----C-cchhHHHHHHHHHHHHHcCCCeEEEeChHH
Confidence            9863   2567899999999999 999885 665543 1     1 347999999999999999999999997544

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.80  E-value=3.3e-18  Score=146.44  Aligned_cols=146  Identities=21%  Similarity=0.320  Sum_probs=111.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      |+||||||+||||+++++.|++. |++|++++|+....   ..+.+..+. ..++.++.+|++|++++.++++  ++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG---NLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCC---chhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            47999999999999999999998 79999999974211   111112221 3468899999999999999998  99999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHh--CCcc-------eeee-cc---ccCC--------------CC
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEA--GNIK-------RFFP-SE---FGND--------------VD  118 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~--~~~~-------~~i~-S~---~g~~--------------~~  118 (263)
                      ||+||...               +..+.++++++.+.  + ++       ++|+ ||   |+..              .+
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~  156 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT  156 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence            99999764               23568899999988  7 76       8774 54   4432              23


Q ss_pred             ccccCCCCchHHHHHHHHHHHHHH----cCCCEEEEeccC
Q 044721          119 RVHAVEPAKSAFATKAKIRRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       119 ~~~~~~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n  154 (263)
                      +..+..+.+.|..+|.++|.+++.    .++++++.|..+
T Consensus       157 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~  196 (361)
T 1kew_A          157 ETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSN  196 (361)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECE
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeece
Confidence            344556788999999999999864    489999888655

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.80  E-value=3.2e-19  Score=146.35  Aligned_cols=155  Identities=15%  Similarity=0.123  Sum_probs=105.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++.++.+|++|.+++.++++   
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD-----VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            346899999999999999999999999999999998     4333321 2221  3468889999999999888775   


Q ss_pred             ----CcCEEEEcCCCcc--------------------chhH----HHHHHHHHHhCCcceeee-ccccCCCCccccCCCC
Q 044721           76 ----QVDVVISTVGHTL--------------------LGDQ----VKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 ----~~d~vv~~a~~~~--------------------~~~~----~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                          ++|+||||||...                    +...    +.+++.+.+.+ ..++|. ||.....    +..+.
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~  176 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKN----PVADG  176 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSC----CCTTC
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcC----CCCCC
Confidence                5899999999731                    1111    33334444455 566663 5433211    11224


Q ss_pred             chHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcc
Q 044721          127 KSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVD  206 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (263)
                      ..|..+|++++.+.                                                      +.++.++++.++
T Consensus       177 ~~Y~asKaa~~~l~------------------------------------------------------~~la~e~~~~gi  202 (262)
T 3rkr_A          177 AAYTASKWGLNGLM------------------------------------------------------TSAAEELRQHQV  202 (262)
T ss_dssp             HHHHHHHHHHHHHH------------------------------------------------------HHHHHHHGGGTC
T ss_pred             chHHHHHHHHHHHH------------------------------------------------------HHHHHHhhhcCc
Confidence            56777887777744                                                      445566778899


Q ss_pred             ccccCCCCCcchhc
Q 044721          207 RVNAVEPAKSAFVT  220 (263)
Q Consensus       207 ~vn~v~pg~~~~~~  220 (263)
                      ++|+|.||...++.
T Consensus       203 ~v~~v~PG~v~t~~  216 (262)
T 3rkr_A          203 RVSLVAPGSVRTEF  216 (262)
T ss_dssp             EEEEEEECCC----
T ss_pred             EEEEEecCCCcCCc
Confidence            99999999876554

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.80  E-value=2.2e-18  Score=144.66  Aligned_cols=142  Identities=22%  Similarity=0.300  Sum_probs=111.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+||||||+|+||+++++.|+++|++|++++|....    ..+   .+ ..++.++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----~~~---~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   72 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATG----KRE---NV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSH   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSC----CGG---GS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcC----chh---hc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            489999999999999999999999999999885321    111   11 2457788999999999999998  8999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccc----cC-----CCCccccCCCCchHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEF----GN-----DVDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~----g~-----~~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      +|+...               +..+.++++++.+.+ ++++|+ |+.    +.     ..++..+..|...|+.+|.++|
T Consensus        73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  151 (311)
T 2p5y_A           73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE  151 (311)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence            998753               234678999999988 888884 543    32     2234445567789999999999


Q ss_pred             HHHH----HcCCCEEEEeccCc
Q 044721          138 RAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       138 ~~~~----~~~~~~~~gr~~n~  155 (263)
                      .+++    +.++++++.|..+.
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~~v  173 (311)
T 2p5y_A          152 HYLSVYGQSYGLKWVSLRYGNV  173 (311)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEE
T ss_pred             HHHHHHHHHcCCCEEEEeeccc
Confidence            9885    35899998886654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=6.2e-20  Score=151.88  Aligned_cols=81  Identities=15%  Similarity=0.258  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---c--cCCcEEEEccCCCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---K--KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~--~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+   .  ..++..+.+|++|+++++++++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILS   78 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHH
Confidence            457899999999999999999999999999999998     333322 1222   1  2357889999999999988887


Q ss_pred             -------CcCEEEEcCCCc
Q 044721           76 -------QVDVVISTVGHT   87 (263)
Q Consensus        76 -------~~d~vv~~a~~~   87 (263)
                             ++|+||||||..
T Consensus        79 ~~~~~~g~id~lv~~Ag~~   97 (278)
T 1spx_A           79 TTLGKFGKLDILVNNAGAA   97 (278)
T ss_dssp             HHHHHHSCCCEEEECCC--
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                   899999999965

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.80  E-value=3.9e-19  Score=142.18  Aligned_cols=141  Identities=16%  Similarity=0.155  Sum_probs=108.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|+||||||+||+++++.|+++|++|++++|+     +.+..   .+...++.++.+|++|+++  +++.++|+|||+|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~~---~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   70 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD-----PQKAA---DRLGATVATLVKEPLVLTE--ADLDSVDAVVDAL   70 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHH---HHTCTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec-----ccccc---cccCCCceEEecccccccH--hhcccCCEEEECC
Confidence            579999999999999999999999999999998     44432   2234679999999999887  7889999999999


Q ss_pred             CCc--------cchhHHHHHHHHHHhCCcceeeeccccCCC----------CccccCCCCchHHHHHHHHHHHH---HHc
Q 044721           85 GHT--------LLGDQVKIIAAIKEAGNIKRFFPSEFGNDV----------DRVHAVEPAKSAFATKAKIRRAV---EAE  143 (263)
Q Consensus        85 ~~~--------~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~----------~~~~~~~~~~~~~~~k~~~e~~~---~~~  143 (263)
                      |..        .+..++++++++.+.+ .+.+++||.+...          ++.....|...|..+|...|.+.   ++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            985        2566789999998887 4444456543211          12222334678999999998652   356


Q ss_pred             CCCEEEEeccCch
Q 044721          144 GIPYTYGDVLNHG  156 (263)
Q Consensus       144 ~~~~~~gr~~n~~  156 (263)
                      +++|++.|..++.
T Consensus       150 ~i~~~ivrp~~v~  162 (224)
T 3h2s_A          150 NVNWIGISPSEAF  162 (224)
T ss_dssp             TSCEEEEEECSBC
T ss_pred             CCcEEEEcCcccc
Confidence            8999999977654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=8.4e-19  Score=147.09  Aligned_cols=140  Identities=16%  Similarity=0.168  Sum_probs=110.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   79 (263)
                      +|+|+||||||+||+++++.|+++  |++|++++|+...     .+.     ..++.++.+|++|.+++.++++  ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN-----TDV-----VNSGPFEVVNALDFNQIEHLVEVHKITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS-----CHH-----HHSSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc-----ccc-----cCCCceEEecCCCHHHHHHHHhhcCCCE
Confidence            478999999999999999999998  8999999998532     111     1256789999999999999998  8999


Q ss_pred             EEEcCCCcc--------------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCccccCCCCchHHHHHHHH
Q 044721           80 VISTVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        80 vv~~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~~~~~~~~~~~~~k~~~  136 (263)
                      |||+|+...              +..+.++++++.+.+ ++++|+ |+   |+..     .++..+..|.+.|+.+|.++
T Consensus        72 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~  150 (312)
T 2yy7_A           72 IYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAG  150 (312)
T ss_dssp             EEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHH
T ss_pred             EEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHH
Confidence            999999753              234678999999988 988884 54   3321     13444556788999999999


Q ss_pred             HHHHHH----cCCCEEEEeccC
Q 044721          137 RRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       137 e~~~~~----~~~~~~~gr~~n  154 (263)
                      |.+++.    .++++++.|..+
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~  172 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYPG  172 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEECE
T ss_pred             HHHHHHHHHhcCCcEEEEeCCe
Confidence            998853    488888777544

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.79  E-value=2.5e-18  Score=149.05  Aligned_cols=150  Identities=20%  Similarity=0.281  Sum_probs=111.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-HCCCCEEEEEcCCCCCCc----chhhhh----hhhcc----CC---cEEEEccCCCH
Q 044721            4 KSKILFIGGTGYIGKFIVEASV-KAGHPTFVLVRESTLSAP----SKSQLL----DHFKK----LG---VNLVIGDVLNH   67 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~----~~~~~~----~~~~~----~~---~~~~~~D~~~~   67 (263)
                      +|+||||||+|+||+++++.|+ ++|++|++++|+......    ...+.+    +.+..    .+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4699999999999999999999 999999999987532100    001111    11111    24   88999999999


Q ss_pred             HHHHHHhc--C-cCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC---------
Q 044721           68 ESLVKAIK--Q-VDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND---------  116 (263)
Q Consensus        68 ~~~~~~~~--~-~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~---------  116 (263)
                      +++.++++  + +|+|||+|+...               +..+.++++++.+.+ ++++|+ |+   |+..         
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccccc
Confidence            99999987  6 999999999764               235678999999998 888884 54   3321         


Q ss_pred             --CCccccCCCCchHHHHHHHHHHHHHH----cCCCEEEEeccC
Q 044721          117 --VDRVHAVEPAKSAFATKAKIRRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       117 --~~~~~~~~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n  154 (263)
                        .++..+..|...|..+|.++|.+++.    .++++++.|..+
T Consensus       161 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~  204 (397)
T 1gy8_A          161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFN  204 (397)
T ss_dssp             CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECE
T ss_pred             cCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccc
Confidence              13344455678999999999999864    488888877544

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.79  E-value=8.8e-20  Score=152.00  Aligned_cols=180  Identities=17%  Similarity=0.129  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhhh-hhhhc---cCCcEEEEccCCCHH--------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQL-LDHFK---KLGVNLVIGDVLNHE--------   68 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~~~~--------   68 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++ |+     .++.+. .+.+.   +.++..+++|++|++        
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGAD   81 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC---
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC-----HHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccc
Confidence            3568999999999999999999999999999999 88     333321 22221   356889999999998        


Q ss_pred             ---------HHHHHhc-------CcCEEEEcCCCccch----hH--------------HHHHHHHHHhCCcceeeecccc
Q 044721           69 ---------SLVKAIK-------QVDVVISTVGHTLLG----DQ--------------VKIIAAIKEAGNIKRFFPSEFG  114 (263)
Q Consensus        69 ---------~~~~~~~-------~~d~vv~~a~~~~~~----~~--------------~~l~~~~~~~~~~~~~i~S~~g  114 (263)
                               +++++++       ++|+||||||.....    ..              ..-++...+.            
T Consensus        82 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  149 (291)
T 1e7w_A           82 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS------------  149 (291)
T ss_dssp             -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHH------------
T ss_pred             cccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH------------
Confidence                     8887775       799999999975311    11              1111111111            


Q ss_pred             CCCCccccCCCCchHHHHHHHHHHHHHHcCC-CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCc
Q 044721          115 NDVDRVHAVEPAKSAFATKAKIRRAVEAEGI-PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNV  193 (263)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~-~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (263)
                               |....+..++.....+.++..- .-..++++|+++..             +..+..+...|..+|.+...+
T Consensus       150 ---------N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l  207 (291)
T 1e7w_A          150 ---------NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM-------------TNQPLLGYTIYTMAKGALEGL  207 (291)
T ss_dssp             ---------HTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT-------------TTSCCTTCHHHHHHHHHHHHH
T ss_pred             ---------HhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechh-------------hcCCCCCCchhHHHHHHHHHH
Confidence                     1134455677766665443200 00015666665554             333445678899999999889


Q ss_pred             eeeccCCCCCCccccccCCCCCcchhc
Q 044721          194 KRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       194 ~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++.++.++++.+|+||+|+||+..++.
T Consensus       208 ~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          208 TRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            999999999999999999999876655

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.79  E-value=2.4e-18  Score=159.60  Aligned_cols=150  Identities=20%  Similarity=0.281  Sum_probs=114.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.... ....+.+..+...++.++.+|++|++++.++++  ++|+|
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcch-HHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            468999999999999999999999999999999975432 111122222234578899999999999999998  89999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-ccc---cCC--------CCccccCCCCchHHHHH
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SEF---GND--------VDRVHAVEPAKSAFATK  133 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~~---g~~--------~~~~~~~~~~~~~~~~k  133 (263)
                      ||+|+...               +..+.++++++.+.+ ++++|+ ||.   +..        .++..+..|.+.|..+|
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK  167 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTK  167 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHH
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHH
Confidence            99999764               234678999999998 898884 543   321        13334556678999999


Q ss_pred             HHHHHHHHH------cCCCEEEEeccC
Q 044721          134 AKIRRAVEA------EGIPYTYGDVLN  154 (263)
Q Consensus       134 ~~~e~~~~~------~~~~~~~gr~~n  154 (263)
                      .++|++++.      .++++++.|..+
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~  194 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFN  194 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECE
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEecc
Confidence            999999864      589999888644

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.79  E-value=5.3e-20  Score=151.36  Aligned_cols=87  Identities=17%  Similarity=0.168  Sum_probs=67.0

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+  |+||++++++|+++|++|++++|+......+..+.+....+.++.++++|++|+++++++++    
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            357899999999  99999999999999999999998853211111111222224678889999999999888775    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|+||||||...
T Consensus        98 ~~g~id~li~nAg~~~  113 (267)
T 3gdg_A           98 DFGQIDAFIANAGATA  113 (267)
T ss_dssp             HTSCCSEEEECCCCCC
T ss_pred             HcCCCCEEEECCCcCC
Confidence               6799999999764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=1.7e-18  Score=148.78  Aligned_cols=151  Identities=18%  Similarity=0.235  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-h--ccCCcEEEEccCCCHHHHHHHhcC--cC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KKLGVNLVIGDVLNHESLVKAIKQ--VD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~~--~d   78 (263)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.........+.+.. .  ...++.++.+|++|++++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            478999999999999999999999999999999853210111111100 0  124678899999999999999885  79


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCc---ceeee-cc---ccC----CCCccccCCCCchHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNI---KRFFP-SE---FGN----DVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~---~~~i~-S~---~g~----~~~~~~~~~~~~~~~~~  132 (263)
                      +|||+||...               +..+.++++++.+.+ +   +++|+ ||   |+.    ..++..+..|.+.|..+
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~s  159 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA  159 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHH
Confidence            9999998643               235678999999988 7   67774 54   332    22445556678899999


Q ss_pred             HHHHHHHHHH----cCCCEEEEeccCc
Q 044721          133 KAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       133 k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      |.++|.+++.    .+++++++|+.+.
T Consensus       160 K~~~e~~~~~~~~~~~~~~~~~r~~~~  186 (372)
T 1db3_A          160 KLYAYWITVNYRESYGMYACNGILFNH  186 (372)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEECCc
Confidence            9999998853    4899998887763

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=1.1e-19  Score=150.70  Aligned_cols=81  Identities=19%  Similarity=0.283  Sum_probs=65.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cC---CcEEEEccCCCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KL---GVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~---~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.   ++.++.+|++|+++++++++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   78 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN   78 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHH
Confidence            457899999999999999999999999999999998     433322 12221  12   57889999999999888775


Q ss_pred             -------CcCEEEEcCCCc
Q 044721           76 -------QVDVVISTVGHT   87 (263)
Q Consensus        76 -------~~d~vv~~a~~~   87 (263)
                             ++|+||||||..
T Consensus        79 ~~~~~~g~iD~lv~nAg~~   97 (280)
T 1xkq_A           79 STLKQFGKIDVLVNNAGAA   97 (280)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHhcCCCCEEEECCCCC
Confidence                   799999999965

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.79  E-value=2.4e-19  Score=147.34  Aligned_cols=73  Identities=19%  Similarity=0.255  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+...             ..++..+.+|++|+++++++++       
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999998431             2457889999999999888776       


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|+||||||...
T Consensus        74 ~iD~lv~~Ag~~~   86 (264)
T 2dtx_A           74 SISVLVNNAGIES   86 (264)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            7999999999653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.79  E-value=5.3e-19  Score=144.23  Aligned_cols=131  Identities=15%  Similarity=0.117  Sum_probs=92.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+ ..+.+.  ..++..+.+|++|+++++++++   
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998     33322 112221  3468889999999999988876   


Q ss_pred             ----CcCEEEEcCCCccc------------------hhHHHHHHH----HHHhCCcceeee-ccccCCCCccccCCCCch
Q 044721           76 ----QVDVVISTVGHTLL------------------GDQVKIIAA----IKEAGNIKRFFP-SEFGNDVDRVHAVEPAKS  128 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~------------------~~~~~l~~~----~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~  128 (263)
                          ++|+||||||....                  ..+.+++++    +.+.+ .+++++ ||.....    +..+...
T Consensus        84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~~  158 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN----KNINMTS  158 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC----CCTTCHH
T ss_pred             HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC----CCCCCcc
Confidence                89999999996531                  122333443    34556 677774 5543221    1223567


Q ss_pred             HHHHHHHHHHHHHH
Q 044721          129 AFATKAKIRRAVEA  142 (263)
Q Consensus       129 ~~~~k~~~e~~~~~  142 (263)
                      |..+|.+++.+++.
T Consensus       159 Y~~sK~a~~~~~~~  172 (255)
T 1fmc_A          159 YASSKAAASHLVRN  172 (255)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHH
Confidence            88899988886543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=2.3e-19  Score=147.90  Aligned_cols=172  Identities=21%  Similarity=0.229  Sum_probs=110.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.+... -.++..+++|++|+++++++++       
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHH-hcCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998     4433322211 1247889999999999888776       


Q ss_pred             CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                      ++|++|||||....     +....-++...+.+                     ....+..++.....+.+. +     +
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~-~-----g  134 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN---------------------LLGTYTLTKLALPYLRKS-Q-----G  134 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHH-T-----C
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHC-C-----C
Confidence            79999999996431     00001111111111                     022333344444433322 1     4


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++|+++.....             +......|..+|.+...+++.++.++++.++++|+|+||...++.
T Consensus       135 ~iv~isS~~~~~-------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          135 NVINISSLVGAI-------------GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             EEEEECCHHHHH-------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             EEEEEcCccccC-------------CCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence            444444443211             112334566666665557777888899999999999999876654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.79  E-value=1.1e-19  Score=151.17  Aligned_cols=181  Identities=13%  Similarity=0.062  Sum_probs=121.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh---ccCCcEEEEccCCC----HHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KKLGVNLVIGDVLN----HESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~~~~~~~D~~~----~~~~~~~   73 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+..    ++.+. .+.+   .+.++.++.+|++|    +++++++
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA----EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCH----HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCch----HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence            35689999999999999999999999999999999831    33221 1222   13568889999999    8888877


Q ss_pred             hc-------CcCEEEEcCCCccch--------------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHH
Q 044721           74 IK-------QVDVVISTVGHTLLG--------------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        74 ~~-------~~d~vv~~a~~~~~~--------------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~  132 (263)
                      ++       ++|+||||||.....              ....-++...+.+                     ....+..+
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~  155 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTN---------------------AIAPFLLT  155 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHH---------------------THHHHHHH
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHh---------------------hHHHHHHH
Confidence            65       799999999975311              1111111111111                     12344556


Q ss_pred             HHHHHHHHHHcCCC-EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccC
Q 044721          133 KAKIRRAVEAEGIP-YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAV  211 (263)
Q Consensus       133 k~~~e~~~~~~~~~-~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v  211 (263)
                      +.....+.++.... -..|+++|+++..             +..+......|..+|.+...+++.++.++++.+|+||+|
T Consensus       156 ~~~~~~~~~~~~~~~~~~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  222 (288)
T 2x9g_A          156 MSFAQRQKGTNPNCTSSNLSIVNLCDAM-------------VDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV  222 (288)
T ss_dssp             HHHHHHC--------CCCEEEEEECCTT-------------TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHhhcCCCCCCCCeEEEEEeccc-------------ccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEE
Confidence            66555544332000 0025666655544             233445667899999998889999999999999999999


Q ss_pred             CCCCcchhc
Q 044721          212 EPAKSAFVT  220 (263)
Q Consensus       212 ~pg~~~~~~  220 (263)
                      +||...++.
T Consensus       223 ~PG~v~t~~  231 (288)
T 2x9g_A          223 APGVSLLPV  231 (288)
T ss_dssp             EESSCSCCT
T ss_pred             EeccccCcc
Confidence            999876554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=1.1e-19  Score=149.64  Aligned_cols=158  Identities=15%  Similarity=0.130  Sum_probs=107.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc----cCCcEEEEccCCCHHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK----KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.    ..++..+.+|++|+++++++++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR   78 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999998     333221 12221    2357889999999999888775


Q ss_pred             -------CcCEEEEcCCCccch---------------hHHHHHHHHHHhC--Ccceee-eccccCCCCccccCCCCchHH
Q 044721           76 -------QVDVVISTVGHTLLG---------------DQVKIIAAIKEAG--NIKRFF-PSEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        76 -------~~d~vv~~a~~~~~~---------------~~~~l~~~~~~~~--~~~~~i-~S~~g~~~~~~~~~~~~~~~~  130 (263)
                             ++|+||||||.....               .++.+++.+.+.+  ..+++| +||......    ......|.
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~  154 (267)
T 2gdz_A           79 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP----VAQQPVYC  154 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----CTTCHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC----CCCCchHH
Confidence                   579999999975311               2244455554431  034555 344322111    11245677


Q ss_pred             HHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccccc
Q 044721          131 ATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNA  210 (263)
Q Consensus       131 ~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~  210 (263)
                      .+|.+++.+.+...                                                    ++.++++.++++|+
T Consensus       155 ~sK~a~~~~~~~~a----------------------------------------------------la~e~~~~gi~v~~  182 (267)
T 2gdz_A          155 ASKHGIVGFTRSAA----------------------------------------------------LAANLMNSGVRLNA  182 (267)
T ss_dssp             HHHHHHHHHHHHHH----------------------------------------------------HHHHHHTCCEEEEE
T ss_pred             HHHHHHHHHHHHHH----------------------------------------------------HHHHhccCCcEEEE
Confidence            78888777554310                                                    23567778999999


Q ss_pred             CCCCCcchh
Q 044721          211 VEPAKSAFV  219 (263)
Q Consensus       211 v~pg~~~~~  219 (263)
                      |+||...++
T Consensus       183 v~Pg~v~t~  191 (267)
T 2gdz_A          183 ICPGFVNTA  191 (267)
T ss_dssp             EEESCBSSH
T ss_pred             EecCcCcch
Confidence            999976554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.79  E-value=2.2e-19  Score=152.83  Aligned_cols=86  Identities=14%  Similarity=0.207  Sum_probs=66.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcc--hh-hhhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS--KS-QLLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.......  .. +..+.+.  +.++..+.+|++|+++++++++  
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999986542110  01 1112221  3467889999999999888876  


Q ss_pred             -----CcCEEEEcCCCcc
Q 044721           76 -----QVDVVISTVGHTL   88 (263)
Q Consensus        76 -----~~d~vv~~a~~~~   88 (263)
                           ++|+||||||...
T Consensus       124 ~~~~g~iDilVnnAG~~~  141 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAIS  141 (346)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCCCC
Confidence                 7999999999754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.78  E-value=2.4e-19  Score=146.96  Aligned_cols=185  Identities=14%  Similarity=0.070  Sum_probs=110.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.++..+.+|++|+++++++++   
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRH-----LDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVD   77 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999999998     333321 12221  3457889999999998877653   


Q ss_pred             -----CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -----QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                           ++|+||||||.....        ..... ...+.-.. ....+.....|....+..++.....+.++.     .|
T Consensus        78 ~~~~g~id~lvnnAg~g~~~--------~~~~~-~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g  142 (260)
T 2qq5_A           78 REQQGRLDVLVNNAYAGVQT--------ILNTR-NKAFWETP-ASMWDDINNVGLRGHYFCSVYGARLMVPAG-----QG  142 (260)
T ss_dssp             HHHTTCCCEEEECCCTTHHH--------HHHTT-TCCTTTSC-TTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-----CC
T ss_pred             HhcCCCceEEEECCcccccc--------ccccC-CCccccCC-HHHHHHHHhhcchhHHHHHHHHHHHHhhcC-----Cc
Confidence                 579999999531000        00000 00000000 000000011122233444555444443332     14


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++|+++.....             . .....|..+|.+...+++.++.++++.++++|+|+||+..++.
T Consensus       143 ~iv~isS~~~~~-------------~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          143 LIVVISSPGSLQ-------------Y-MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             EEEEECCGGGTS-------------C-CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             EEEEEcChhhcC-------------C-CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence            455444433110             0 0124566666666667788888899999999999999876654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.78  E-value=5.7e-18  Score=144.73  Aligned_cols=142  Identities=20%  Similarity=0.195  Sum_probs=109.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEcc-CCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD-VLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~d~vv   81 (263)
                      ++|+|+||||||+||+++++.|+++|++|++++|+.+..   ..+.+..  ..++.++.+| ++|++++.++++++|+||
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---IAEELQA--IPNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---HHHHHHT--STTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh---hHHHHhh--cCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            368999999999999999999999999999999985321   1111111  2368899999 999999999999999999


Q ss_pred             EcCCCcc---chhHHHHHHHHHHhCCcceeee-ccccC-CCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           82 STVGHTL---LGDQVKIIAAIKEAGNIKRFFP-SEFGN-DVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        82 ~~a~~~~---~~~~~~l~~~~~~~~~~~~~i~-S~~g~-~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                      |+++...   ....+++++++.+.++++++|+ |+... ...    ..+...|+.+|.++|+++++.++++++.|..
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~----~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg  151 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG----PWPAVPMWAPKFTVENYVRQLGLPSTFVYAG  151 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS----SCCCCTTTHHHHHHHHHHHTSSSCEEEEEEC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccC----CCCCccHHHHHHHHHHHHHHcCCCEEEEecc
Confidence            9987641   2334889999988753678875 55431 111    1234679999999999999999999988843

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.78  E-value=4.6e-19  Score=145.41  Aligned_cols=140  Identities=16%  Similarity=0.144  Sum_probs=90.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.... ....+.+......++.++.+|++|+++++++++      
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA-VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH-HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh-HHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            3568999999999999999999999999999999974321 111111111114568899999999999888765      


Q ss_pred             -CcCEEEEcCCCcc-------------------chhHHHHHHHH----HHhCCcceeee-ccccCCCC---ccccCCCCc
Q 044721           76 -QVDVVISTVGHTL-------------------LGDQVKIIAAI----KEAGNIKRFFP-SEFGNDVD---RVHAVEPAK  127 (263)
Q Consensus        76 -~~d~vv~~a~~~~-------------------~~~~~~l~~~~----~~~~~~~~~i~-S~~g~~~~---~~~~~~~~~  127 (263)
                       ++|+||||||...                   +..+.++++++    .+.+..+++|+ ||......   ...+..+..
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  170 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  170 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence             4899999999753                   11223344433    33331256663 55332111   111223356


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+++.
T Consensus       171 ~Y~~sK~a~~~~~~~  185 (265)
T 1h5q_A          171 FYNSSKAACSNLVKG  185 (265)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHH
Confidence            788888888875543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.78  E-value=2.9e-18  Score=144.08  Aligned_cols=142  Identities=19%  Similarity=0.239  Sum_probs=108.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ||+|||||||||||+++++.|+++| .++++.+....    ..+    ....++.++.+|++| +++.++++++|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~----~~~----~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~   70 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSG----NEE----FVNEAARLVKADLAA-DDIKDYLKGAEEVWHI   70 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSC----CGG----GSCTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCC----Chh----hcCCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence            4689999999999999999999999 55555554321    111    114568899999999 9999999999999999


Q ss_pred             CCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHHHHHHH
Q 044721           84 VGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        84 a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      |+...               +..+.++++++.+.+ ++++|+ ||   |+..    .++..+..|.+.|..+|.++|.++
T Consensus        71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  149 (313)
T 3ehe_A           71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALI  149 (313)
T ss_dssp             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            98642               345688999999999 988884 54   4322    234456677889999999999988


Q ss_pred             H----HcCCCEEEEeccCch
Q 044721          141 E----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       141 ~----~~~~~~~~gr~~n~~  156 (263)
                      +    +.++++++.|..++.
T Consensus       150 ~~~~~~~g~~~~ilRp~~v~  169 (313)
T 3ehe_A          150 ESYCHTFDMQAWIYRFANVI  169 (313)
T ss_dssp             HHHHHHTTCEEEEEECSCEE
T ss_pred             HHHHHhcCCCEEEEeecccc
Confidence            5    458999999977753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.78  E-value=3.1e-18  Score=147.79  Aligned_cols=150  Identities=19%  Similarity=0.241  Sum_probs=111.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh--ccC-CcEEEEccCCCHHHHHHHhcC--cC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF--KKL-GVNLVIGDVLNHESLVKAIKQ--VD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~-~~~~~~~D~~~~~~~~~~~~~--~d   78 (263)
                      |+||||||+||||+++++.|+++|++|++++|+.........+.+ ...  ... ++.++.+|++|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999998643111111111 000  012 688899999999999999985  69


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcc-----eeee-cc---ccCC---CCccccCCCCchHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIK-----RFFP-SE---FGND---VDRVHAVEPAKSAFA  131 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~-----~~i~-S~---~g~~---~~~~~~~~~~~~~~~  131 (263)
                      +|||+|+...               +..+.++++++.+.+ ++     ++|+ |+   |+..   .++..+..|.+.|+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  187 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHH
Confidence            9999999754               234678999998887 76     7774 54   3322   244455667889999


Q ss_pred             HHHHHHHHHHH----cCCCEEEEeccCc
Q 044721          132 TKAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       132 ~k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      +|.++|.+++.    .+++++++|+.+.
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~  215 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILFNH  215 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeCce
Confidence            99999998864    3888888887763

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.78  E-value=1.7e-19  Score=150.66  Aligned_cols=80  Identities=18%  Similarity=0.297  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cC---CcEEEEccCCCHHHHHHHhc-
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KL---GVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~---~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +.   ++.++.+|++|+++++++++ 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            46899999999999999999999999999999998     433321 12221  12   57889999999999888776 


Q ss_pred             ------CcCEEEEcCCCc
Q 044721           76 ------QVDVVISTVGHT   87 (263)
Q Consensus        76 ------~~d~vv~~a~~~   87 (263)
                            ++|+||||||..
T Consensus       100 ~~~~~g~iD~lvnnAG~~  117 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGAN  117 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHhcCCCCEEEECCCcC
Confidence                  799999999964

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=4.7e-19  Score=146.68  Aligned_cols=132  Identities=18%  Similarity=0.158  Sum_probs=93.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc----cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK----KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     ..+.+.+ +.+.    ..++.++.+|++|+++++++++  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----hHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     3333221 2221    1346788999999999888776  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCc--ceee-eccccCCCCccccCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNI--KRFF-PSEFGNDVDRVHAVE  124 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~--~~~i-~S~~g~~~~~~~~~~  124 (263)
                           ++|+||||||....                   ..    ++.+++.+.+.+ +  +++| +||......  .+..
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~--~~~~  182 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRV--LPLS  182 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSC--CSCG
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhccc--CCCC
Confidence                 79999999996531                   11    466777777776 5  6776 355432210  1122


Q ss_pred             CCchHHHHHHHHHHHHHH
Q 044721          125 PAKSAFATKAKIRRAVEA  142 (263)
Q Consensus       125 ~~~~~~~~k~~~e~~~~~  142 (263)
                      +...|..+|.+++.+.+.
T Consensus       183 ~~~~Y~~sK~a~~~~~~~  200 (279)
T 1xg5_A          183 VTHFYSATKYAVTALTEG  200 (279)
T ss_dssp             GGHHHHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHH
Confidence            345788899988875543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.78  E-value=1.9e-19  Score=145.88  Aligned_cols=74  Identities=16%  Similarity=0.110  Sum_probs=61.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      .++|+++||||+|+||+++++.|+++|++|++++|+....     +       .....+.+|++|+++++++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----A-------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----S-------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc-----c-------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999985321     1       124567899999998887765      


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        73 ~~g~iD~lv~~Ag~~   87 (241)
T 1dhr_A           73 GDQKVDAILCVAGGW   87 (241)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             CCCCCCEEEEccccc
Confidence               799999999964

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.78  E-value=1.2e-18  Score=142.57  Aligned_cols=132  Identities=19%  Similarity=0.272  Sum_probs=90.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+     .++.+ ..+.+.  +.++.++.+|++|+++++++++    
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD-----EAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     33322 112221  3468899999999999988875    


Q ss_pred             ---CcCEEEEcCCCcc--------------------chhHHHHHHH----HHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ---QVDVVISTVGHTL--------------------LGDQVKIIAA----IKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ---~~d~vv~~a~~~~--------------------~~~~~~l~~~----~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                         ++|+||||||...                    +..+.+++++    +.+.+ .++++. |+......  .+..+..
T Consensus        87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~~~~~~~  163 (260)
T 3awd_A           87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIV--NRPQQQA  163 (260)
T ss_dssp             HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--CSSSCCH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhccc--CCCCCcc
Confidence               7999999998643                    1112333333    33455 667663 44322111  1112236


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+++.
T Consensus       164 ~Y~~sK~a~~~~~~~  178 (260)
T 3awd_A          164 AYNASKAGVHQYIRS  178 (260)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHH
Confidence            788899988886543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.78  E-value=2.3e-19  Score=145.78  Aligned_cols=187  Identities=16%  Similarity=0.136  Sum_probs=119.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++|+++||||+|+||+++++.|+++|  ++|++++|+.     ++.+.+..+...++.++.+|++|+++++++++    
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV-----EKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG-----GGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCH-----HHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999  9999999984     33332222224568899999999999988876    


Q ss_pred             -----CcCEEEEcCCCcc-ch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHH---
Q 044721           76 -----QVDVVISTVGHTL-LG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA---  142 (263)
Q Consensus        76 -----~~d~vv~~a~~~~-~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~---  142 (263)
                           ++|+||||||... ..    ....-++...+.+                     ....+...+.....+.+.   
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N---------------------~~~~~~l~~~~~~~~~~~~~~  134 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVN---------------------TTSVVLLTQKLLPLLKNAASK  134 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHH---------------------THHHHHHHHHTHHHHHHHHHS
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHhhcccc
Confidence                 8999999999754 11    1111122222221                     123344456555555443   


Q ss_pred             ---cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          143 ---EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       143 ---~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                         ....-..++++++++.........      ..........|..+|.+...+.+.++.++++.++++|+|.||...++
T Consensus       135 ~~~~~~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  208 (250)
T 1yo6_A          135 ESGDQLSVSRAAVITISSGLGSITDNT------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN  208 (250)
T ss_dssp             SCSSCCCTTTCEEEEECCGGGCSTTCC------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred             cCCCcccCCCcEEEEeccCccccCCcc------cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecC
Confidence               200000134444444332111000      00001345679999999888999999999999999999999976554


Q ss_pred             c
Q 044721          220 T  220 (263)
Q Consensus       220 ~  220 (263)
                      .
T Consensus       209 ~  209 (250)
T 1yo6_A          209 L  209 (250)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.78  E-value=6.5e-19  Score=143.09  Aligned_cols=81  Identities=22%  Similarity=0.307  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++ |+.     ...+ ..+.+.  +.++.++.+|++|+++++++++  
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAS-----TSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTA   77 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTC-----SHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999984 552     2222 112221  3468889999999999988776  


Q ss_pred             -----CcCEEEEcCCCc
Q 044721           76 -----QVDVVISTVGHT   87 (263)
Q Consensus        76 -----~~d~vv~~a~~~   87 (263)
                           ++|+||||||..
T Consensus        78 ~~~~~~~d~vi~~Ag~~   94 (247)
T 2hq1_A           78 MDAFGRIDILVNNAGIT   94 (247)
T ss_dssp             HHHHSCCCEEEECC---
T ss_pred             HHhcCCCCEEEECCCCC
Confidence                 799999999975

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.78  E-value=6.1e-20  Score=150.77  Aligned_cols=171  Identities=16%  Similarity=0.137  Sum_probs=108.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.. +.+ ..++..+.+|++|+++++++++     
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998     4443322 222 3467889999999999888775     


Q ss_pred             --CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|+||||||.......    ..-++...+.+                     ....+..++.....+ ++ +     
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~-~~-~-----  129 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVN---------------------LTGSFLVARKAGEVL-EE-G-----  129 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHH---------------------HHHHHHHHHHHHHHC-CT-T-----
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHH-hc-C-----
Confidence              57999999997532110    00011111111                     011222333333322 11 1     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      |+++|+++..             +. +......|..+|.+...+++.++.++++.++++|+|+||...++.
T Consensus       130 g~iv~isS~~-------------~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  186 (263)
T 2a4k_A          130 GSLVLTGSVA-------------GL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  186 (263)
T ss_dssp             CEEEEECCCT-------------TC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             CEEEEEecch-------------hc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence            3333333322             11 223345566666555557777888899999999999999765543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.78  E-value=6.9e-19  Score=142.01  Aligned_cols=81  Identities=22%  Similarity=0.193  Sum_probs=67.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhh---hccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDH---FKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~---~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+     .++.+. .+.   ..+.++.++.+|++|+++++++++   
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARS-----VDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVL   75 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998     433322 111   124578899999999999998887   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|++|||||...
T Consensus        76 ~~~g~id~li~~Ag~~~   92 (235)
T 3l77_A           76 ERFGDVDVVVANAGLGY   92 (235)
T ss_dssp             HHHSSCSEEEECCCCCC
T ss_pred             HhcCCCCEEEECCcccc
Confidence                7899999999753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.78  E-value=2e-19  Score=152.25  Aligned_cols=180  Identities=17%  Similarity=0.123  Sum_probs=124.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhhh-hhhhc---cCCcEEEEccCCCHH--------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQL-LDHFK---KLGVNLVIGDVLNHE--------   68 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~~~~--------   68 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++ |+     .++.+. .+.+.   +.++.++.+|++|++        
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~  118 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGAD  118 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-----
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccc
Confidence            4568999999999999999999999999999999 87     333322 12221   346889999999988        


Q ss_pred             ---------HHHHHhc-------CcCEEEEcCCCccchh----H--------------HHHHHHHHHhCCcceeeecccc
Q 044721           69 ---------SLVKAIK-------QVDVVISTVGHTLLGD----Q--------------VKIIAAIKEAGNIKRFFPSEFG  114 (263)
Q Consensus        69 ---------~~~~~~~-------~~d~vv~~a~~~~~~~----~--------------~~l~~~~~~~~~~~~~i~S~~g  114 (263)
                               +++++++       ++|+||||||......    .              ..-++...+.            
T Consensus       119 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v------------  186 (328)
T 2qhx_A          119 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS------------  186 (328)
T ss_dssp             --CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHH------------
T ss_pred             cccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH------------
Confidence                     8887775       7999999999753111    1              1111111111            


Q ss_pred             CCCCccccCCCCchHHHHHHHHHHHHHHcCC-CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCc
Q 044721          115 NDVDRVHAVEPAKSAFATKAKIRRAVEAEGI-PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNV  193 (263)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~-~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (263)
                               |....+..++.....+.++..- +-..++++|+++..             +..+..+...|..+|.+...+
T Consensus       187 ---------N~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~-------------~~~~~~~~~~Y~asKaal~~l  244 (328)
T 2qhx_A          187 ---------NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM-------------TNQPLLGYTIYTMAKGALEGL  244 (328)
T ss_dssp             ---------HTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTT-------------TTSCCTTCHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchh-------------hccCCCCcHHHHHHHHHHHHH
Confidence                     1134455667666665543300 00015666665554             333445667899999999889


Q ss_pred             eeeccCCCCCCccccccCCCCCcchhc
Q 044721          194 KRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       194 ~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++.++.++++.+|+||+|+||+..++.
T Consensus       245 ~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          245 TRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             HHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            999999999999999999999876654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.78  E-value=3.6e-19  Score=144.66  Aligned_cols=130  Identities=18%  Similarity=0.151  Sum_probs=89.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+   .+.++..+.+|++|+++++++++  
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS-----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEI   79 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999998     3333221 111   13568889999999999988886  


Q ss_pred             -----CcCEEEEcCCCccc-------------------hhH----HHHHHHHHHhCCcceeee-ccccCCCCccccCCCC
Q 044721           76 -----QVDVVISTVGHTLL-------------------GDQ----VKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-------------------~~~----~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~  126 (263)
                           ++|+||||||....                   ..+    +.+++.+.+.+ .+++|+ ||......    ..+.
T Consensus        80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~----~~~~  154 (248)
T 2pnf_A           80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTG----NVGQ  154 (248)
T ss_dssp             HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHC----CTTC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCC----CCCC
Confidence                 79999999996531                   111    33444455556 666663 44321100    1124


Q ss_pred             chHHHHHHHHHHHHH
Q 044721          127 KSAFATKAKIRRAVE  141 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~  141 (263)
                      ..|..+|.+++.+.+
T Consensus       155 ~~Y~~sK~a~~~~~~  169 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTK  169 (248)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHH
Confidence            567777777776544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.78  E-value=1.1e-18  Score=141.35  Aligned_cols=151  Identities=19%  Similarity=0.179  Sum_probs=104.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------C
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------Q   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~   76 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+.     ++.  .+.+   ++..+.+|++| ++++++++       +
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~-----~~~--~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP-----EEA--AQSL---GAVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-----HHH--HHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHH--HHhh---CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999983     331  1222   27889999999 76666543       7


Q ss_pred             cCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHH
Q 044721           77 VDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        77 ~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~  132 (263)
                      +|++|||||....                   ..    .+.+++.+.+.+ .+++|. ||.......  ...+...|..+
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--~~~~~~~Y~~s  147 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAG--GPVPIPAYTTA  147 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--TTSCCHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCC--CCCCCccHHHH
Confidence            9999999996531                   11    233444445556 667663 443221110  01224567777


Q ss_pred             HHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCC
Q 044721          133 KAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVE  212 (263)
Q Consensus       133 k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~  212 (263)
                      |.+++.+                                                      ++.++.++++.++++|+|+
T Consensus       148 K~a~~~~------------------------------------------------------~~~la~e~~~~gi~v~~v~  173 (239)
T 2ekp_A          148 KTALLGL------------------------------------------------------TRALAKEWARLGIRVNLLC  173 (239)
T ss_dssp             HHHHHHH------------------------------------------------------HHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHH------------------------------------------------------HHHHHHHhhhcCcEEEEEE
Confidence            8777764                                                      4455567888899999999


Q ss_pred             CCCcchhcHH
Q 044721          213 PAKSAFVTKA  222 (263)
Q Consensus       213 pg~~~~~~~~  222 (263)
                      ||...++...
T Consensus       174 Pg~v~t~~~~  183 (239)
T 2ekp_A          174 PGYVETEFTL  183 (239)
T ss_dssp             ECSBCSGGGH
T ss_pred             eCCccCchhh
Confidence            9987766543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.78  E-value=1.4e-19  Score=149.60  Aligned_cols=178  Identities=20%  Similarity=0.171  Sum_probs=118.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEc-CCCCCCcchhhh-hhhhc---cCCcEEEEccCCCH----HHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQL-LDHFK---KLGVNLVIGDVLNH----ESLVK   72 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~-~~~~~---~~~~~~~~~D~~~~----~~~~~   72 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++| +     .++.+. .+.+.   +.++.++.+|++|+    +++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   83 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS-----EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCED   83 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHH
Confidence            35689999999999999999999999999999999 6     333321 12221   35688899999999    88887


Q ss_pred             Hhc-------CcCEEEEcCCCccchh----HH-----------HHHHHHHHhCCcceeeeccccCCCCccccCCCCchHH
Q 044721           73 AIK-------QVDVVISTVGHTLLGD----QV-----------KIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAF  130 (263)
Q Consensus        73 ~~~-------~~d~vv~~a~~~~~~~----~~-----------~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~  130 (263)
                      +++       ++|+||||||......    ..           .-++...+.+                     ....+.
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~  142 (276)
T 1mxh_A           84 IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSN---------------------AVAPLF  142 (276)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHH---------------------THHHHH
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhc---------------------cHHHHH
Confidence            775       7999999999753111    00           1111111111                     123344


Q ss_pred             HHHHHHHHHHHHcC-CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccc
Q 044721          131 ATKAKIRRAVEAEG-IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVN  209 (263)
Q Consensus       131 ~~k~~~e~~~~~~~-~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn  209 (263)
                      .++.....+. +.+ .+-.-++++|+++..             +..+......|..+|.+...+++.++.++++.++++|
T Consensus       143 l~~~~~~~~~-~~~~~~~~~g~iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~  208 (276)
T 1mxh_A          143 LIRAFARRQG-EGGAWRSRNLSVVNLCDAM-------------TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVN  208 (276)
T ss_dssp             HHHHHHHTC--------CCCEEEEEECCGG-------------GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHHh-cCCCCCCCCcEEEEECchh-------------hcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            4555544433 110 000015666666554             2233455678999999998899999999999999999


Q ss_pred             cCCCCCcchh
Q 044721          210 AVEPAKSAFV  219 (263)
Q Consensus       210 ~v~pg~~~~~  219 (263)
                      +|+||...++
T Consensus       209 ~v~PG~v~t~  218 (276)
T 1mxh_A          209 AVAPGLSLLP  218 (276)
T ss_dssp             EEEESSBSCC
T ss_pred             EEecCcccCC
Confidence            9999987654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.78  E-value=2.1e-19  Score=151.64  Aligned_cols=179  Identities=13%  Similarity=0.040  Sum_probs=122.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--c--CCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--K--LGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~--~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  .  .++.++.+|++|+++++++++  
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR-----QDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            46799999999999999999999999999999999     433332 12221  2  268889999999999888775  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC-C
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG-I  145 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~-~  145 (263)
                           ++|+||||||......    ...-.+.+.+.+                     ....+...+.....+.++.. -
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~~~  140 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVN---------------------LHGVVNGVTTFVPRMVERVKAG  140 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHhhhcc
Confidence                 6799999999753211    111122222221                     13345556766666655400 0


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .-..|+++|++|..             +..+..+...|..+|.+...+.+.++.++...++++|+|+||...++.
T Consensus       141 ~~~~g~iV~isS~a-------------~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          141 EQKGGHVVNTASMA-------------AFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             SCCCCEEEEECCGG-------------GTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred             CCCCcEEEEecccc-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence            00025666665555             333444567899999998889999999999999999999999776544

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.78  E-value=2.5e-18  Score=145.88  Aligned_cols=151  Identities=19%  Similarity=0.189  Sum_probs=106.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|+||||||+||||++++++|+++|++|+++.|+....  .+...+..+.  ..+++++.+|++|++++.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV--KKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCH--HHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchh--HHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            468999999999999999999999999999999984321  1111111111  124788999999999999999999999


Q ss_pred             EEcCCCcc--------------chhHHHHHHHHHHhCCcceeee-ccccC----C-----CCcccc--------C-CCCc
Q 044721           81 ISTVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SEFGN----D-----VDRVHA--------V-EPAK  127 (263)
Q Consensus        81 v~~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~----~-----~~~~~~--------~-~~~~  127 (263)
                      ||+|+...              +..+.++++++.+.+.++++|+ ||...    .     .++..+        . .+..
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (337)
T 2c29_D           82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW  161 (337)
T ss_dssp             EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence            99998542              2345788998888753678874 55331    1     011110        0 1344


Q ss_pred             hHHHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          128 SAFATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       128 ~~~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      .|..+|..+|.++.    ..++++++.|..+.
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v  193 (337)
T 2c29_D          162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLV  193 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCce
Confidence            69999999998873    45899988886654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.78  E-value=8e-19  Score=148.95  Aligned_cols=147  Identities=18%  Similarity=0.124  Sum_probs=107.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh----ccCCcEEE-EccCCCHHHHHHHhcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF----KKLGVNLV-IGDVLNHESLVKAIKQ   76 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~-~~D~~~~~~~~~~~~~   76 (263)
                      +++|+||||||+|+||+++++.|+++|++|++++|+     ..+.+.+...    ...++.++ .+|++|.+++.+++++
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----cccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcC
Confidence            456899999999999999999999999999999998     3332221111    12467888 7999999999999999


Q ss_pred             cCEEEEcCCCcc------------chhHHHHHHHHHH-hCCcceeee-ccccCC---C--------Cccc----------
Q 044721           77 VDVVISTVGHTL------------LGDQVKIIAAIKE-AGNIKRFFP-SEFGND---V--------DRVH----------  121 (263)
Q Consensus        77 ~d~vv~~a~~~~------------~~~~~~l~~~~~~-~~~~~~~i~-S~~g~~---~--------~~~~----------  121 (263)
                      +|+|||+|+...            +..+.++++++.+ .+ ++++|+ ||....   .        ++..          
T Consensus        84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  162 (342)
T 1y1p_A           84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK  162 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHH
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhc
Confidence            999999999763            3456889999884 56 888874 543221   1        1111          


Q ss_pred             ------cCCCCchHHHHHHHHHHHHHHc------CCCEEEEeccC
Q 044721          122 ------AVEPAKSAFATKAKIRRAVEAE------GIPYTYGDVLN  154 (263)
Q Consensus       122 ------~~~~~~~~~~~k~~~e~~~~~~------~~~~~~gr~~n  154 (263)
                            +..|.+.|+.+|.++|.+++..      ++++++.|..+
T Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~  207 (342)
T 1y1p_A          163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNY  207 (342)
T ss_dssp             HSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESE
T ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCc
Confidence                  1234578999999999988542      56666666444

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.78  E-value=1.4e-19  Score=151.10  Aligned_cols=81  Identities=20%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|  +||+++++.|+++|++|++++|+.     +..+.+..+  ...++..+++|++|+++++++++   
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE-----TFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999997  999999999999999999999983     222222211  12357889999999999988875   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|+||||||...
T Consensus       104 ~~~g~iD~lVnnAG~~~  120 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSD  120 (296)
T ss_dssp             HHHSCCSEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCcCC
Confidence                6899999999763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.78  E-value=4.5e-18  Score=147.75  Aligned_cols=151  Identities=17%  Similarity=0.168  Sum_probs=108.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCc---------------chhhhhhhhccCCcEEEEccCCCH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP---------------SKSQLLDHFKKLGVNLVIGDVLNH   67 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~~~~~~~~~~~D~~~~   67 (263)
                      ++++||||||+||||+++++.|+++|++|++++|.......               +...........++.++.+|++|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            47899999999999999999999999999999886311000               001101112245788999999999


Q ss_pred             HHHHHHhcC--cCEEEEcCCCcc------------------chhHHHHHHHHHHhCCc-ceeee-cc---ccCCC---Cc
Q 044721           68 ESLVKAIKQ--VDVVISTVGHTL------------------LGDQVKIIAAIKEAGNI-KRFFP-SE---FGNDV---DR  119 (263)
Q Consensus        68 ~~~~~~~~~--~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~~~-~~~i~-S~---~g~~~---~~  119 (263)
                      +++.+++++  +|+|||+||...                  +.++.++++++.+.+ + +++|+ ||   |+...   ++
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~E  168 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEE  168 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCCCCc
Confidence            999999987  999999998653                  223578899999888 7 47774 54   33221   11


Q ss_pred             c--------------ccCCCCchHHHHHHHHHHHHHH----cCCCEEEEeccC
Q 044721          120 V--------------HAVEPAKSAFATKAKIRRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       120 ~--------------~~~~~~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n  154 (263)
                      .              .+..|.+.|..+|.++|.+++.    .++++++.|..+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~  221 (404)
T 1i24_A          169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGV  221 (404)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECE
T ss_pred             cccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecce
Confidence            1              2455678899999999998754    388888777554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.78  E-value=1.6e-19  Score=148.15  Aligned_cols=82  Identities=17%  Similarity=0.101  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--c-------CCcEEEEccCCCHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--K-------LGVNLVIGDVLNHESLV   71 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~-------~~~~~~~~D~~~~~~~~   71 (263)
                      |++++++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.  +       .++.++.+|++|+++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   79 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD-----RAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAAR   79 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTC------------CCEEEECCTTSHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHH
Confidence            456899999999999999999999999999999998     333321 12221  1       46788999999999988


Q ss_pred             HHhcC-------c-CEEEEcCCCcc
Q 044721           72 KAIKQ-------V-DVVISTVGHTL   88 (263)
Q Consensus        72 ~~~~~-------~-d~vv~~a~~~~   88 (263)
                      ++++.       + |+||||||...
T Consensus        80 ~~~~~~~~~~g~i~d~vi~~Ag~~~  104 (264)
T 2pd6_A           80 CLLEQVQACFSRPPSVVVSCAGITQ  104 (264)
T ss_dssp             HHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHhCCCCeEEEECCCcCC
Confidence            87764       4 99999999753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.78  E-value=6.2e-19  Score=143.47  Aligned_cols=153  Identities=15%  Similarity=0.096  Sum_probs=108.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh---ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +|+++||||+|+||++++++|+++|++|++++|+     .++.+.+ +.+   .+.++.++.+|++|+++++++++    
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLS-----AETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATME   76 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999998     3333211 111   13457889999999999988876    


Q ss_pred             ---CcCEEEEcCCCccch----------------------h----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCC
Q 044721           76 ---QVDVVISTVGHTLLG----------------------D----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEP  125 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~----------------------~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~  125 (263)
                         ++|+||||||.....                      .    .+.+++.+.+.+ .+++++ ||......    ..+
T Consensus        77 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~  151 (250)
T 2cfc_A           77 QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVA----FPG  151 (250)
T ss_dssp             HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTT
T ss_pred             HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC----CCC
Confidence               799999999864210                      1    134455555556 677763 54332111    122


Q ss_pred             CchHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCc
Q 044721          126 AKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDV  205 (263)
Q Consensus       126 ~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (263)
                      ...|..+|.+++.+.+                                                      .++.++++.+
T Consensus       152 ~~~Y~~sK~a~~~~~~------------------------------------------------------~l~~e~~~~g  177 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTK------------------------------------------------------SVAVDYAGSG  177 (250)
T ss_dssp             CHHHHHHHHHHHHHHH------------------------------------------------------HHHHHHGGGT
T ss_pred             chhHHHHHHHHHHHHH------------------------------------------------------HHHHHhcccC
Confidence            4567788888877544                                                      3445677789


Q ss_pred             cccccCCCCCcchhc
Q 044721          206 DRVNAVEPAKSAFVT  220 (263)
Q Consensus       206 ~~vn~v~pg~~~~~~  220 (263)
                      +++|++.||....+.
T Consensus       178 i~v~~v~Pg~v~t~~  192 (250)
T 2cfc_A          178 IRCNAVCPGMIETPM  192 (250)
T ss_dssp             EEEEEEEECSBCSTT
T ss_pred             eEEEEEEeCcCccCc
Confidence            999999999866554

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.78  E-value=4.2e-20  Score=158.84  Aligned_cols=189  Identities=13%  Similarity=0.034  Sum_probs=115.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEcCCCCCCcc-----------hhhhhhhhccCCcEEEEccCCCHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPS-----------KSQLLDHFKKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~~~~~~~D~~~~~~~~   71 (263)
                      +|++|||||+++||+++++.|++ +|++|++++|+.......           ..+.+... +..+..+.+|++|+++++
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CCcEEEEEecCCCHHHHH
Confidence            68999999999999999999999 999999999986543211           00112221 446788999999998876


Q ss_pred             HHh--------cCcCEEEEcCCCccchhHHHHHHHHHHhCCccee-eecccc---------------------CCC----
Q 044721           72 KAI--------KQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRF-FPSEFG---------------------NDV----  117 (263)
Q Consensus        72 ~~~--------~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~-i~S~~g---------------------~~~----  117 (263)
                      +++        .++|+||||||......        ...| +-+. ....++                     ...    
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~--------p~~G-~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~  210 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKL--------PGSG-EVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEI  210 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEEC--------TTTC-CEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccc--------cccc-cccccccccccccccccccccccccccccccCCCCHHHH
Confidence            654        46899999998631000        0000 0000 000000                     000    


Q ss_pred             CccccCCCCchH-HHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhH--HHHHHHHHhcCCce
Q 044721          118 DRVHAVEPAKSA-FATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQ--VKIIAAIKEAGNVK  194 (263)
Q Consensus       118 ~~~~~~~~~~~~-~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  194 (263)
                      +....++....+ ..++..+...+.+     .-|+++|++|..             +..+....  ..|.++|++...++
T Consensus       211 ~~~v~Vn~~~~~~~~~~a~~~~~m~~-----~gG~IVniSSi~-------------g~~~~p~~~~~aY~ASKaAl~~lT  272 (422)
T 3s8m_A          211 EDTITVMGGQDWELWIDALEGAGVLA-----DGARSVAFSYIG-------------TEITWPIYWHGALGKAKVDLDRTA  272 (422)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHTTCEE-----EEEEEEEEEECC-------------CGGGHHHHTSHHHHHHHHHHHHHH
T ss_pred             HHHHHhhchhHHHHHHHHHHHHHHhh-----CCCEEEEEeCch-------------hhccCCCccchHHHHHHHHHHHHH
Confidence            000000111111 2233322221111     136666655543             33334444  78999999999999


Q ss_pred             eeccCCCCCCccccccCCCCCcchhc
Q 044721          195 RFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       195 ~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      |.++.||++.+||||+|+||...++.
T Consensus       273 rsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          273 QRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             HHHHHHhCccCEEEEEEEcCCCcChh
Confidence            99999999999999999999766554

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.78  E-value=1.1e-18  Score=141.59  Aligned_cols=128  Identities=14%  Similarity=0.156  Sum_probs=89.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~   73 (263)
                      +|+++||||+|+||+++++.|+++|+       +|++++|+     +++.+.+ ..+.  +.++.++.+|++|+++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRL   76 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC-----HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHH
Confidence            57899999999999999999999999       89999998     3333321 2221  34578899999999998887


Q ss_pred             hc-------CcCEEEEcCCCcc-------------------chhHHHHHH----HHHHhCCcceeee-ccccCCCCcccc
Q 044721           74 IK-------QVDVVISTVGHTL-------------------LGDQVKIIA----AIKEAGNIKRFFP-SEFGNDVDRVHA  122 (263)
Q Consensus        74 ~~-------~~d~vv~~a~~~~-------------------~~~~~~l~~----~~~~~~~~~~~i~-S~~g~~~~~~~~  122 (263)
                      ++       ++|+||||||...                   +..+.++++    .+.+.+ .+++++ ||.....    +
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----~  151 (244)
T 2bd0_A           77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK----A  151 (244)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS----C
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcC----C
Confidence            76       7999999999653                   112233333    344455 667763 5433221    1


Q ss_pred             CCCCchHHHHHHHHHHHHH
Q 044721          123 VEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus       123 ~~~~~~~~~~k~~~e~~~~  141 (263)
                      ..+...|..+|.+++.+.+
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~  170 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVE  170 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHH
Confidence            2235678888888887654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.78  E-value=9.6e-20  Score=148.74  Aligned_cols=170  Identities=23%  Similarity=0.192  Sum_probs=110.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+...     .        ..+..+.+|++|+++++++++       
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~--------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP-----P--------EGFLAVKCDITDTEQVEQAYKEIEETHG   86 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----C--------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh-----h--------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998432     1        126788999999999888775       


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCc
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ++|+||||||.......    ....... +.+.            ...|....+..++.....+.++..     ++++|+
T Consensus        87 ~iD~lv~nAg~~~~~~~----~~~~~~~-~~~~------------~~~N~~g~~~l~~~~~~~m~~~~~-----g~iv~i  144 (253)
T 2nm0_A           87 PVEVLIANAGVTKDQLL----MRMSEED-FTSV------------VETNLTGTFRVVKRANRAMLRAKK-----GRVVLI  144 (253)
T ss_dssp             SCSEEEEECSCCTTTC-------CCTTT-THHH------------HHHHHHHHHHHHHHHHHHHHHHTC-----EEEEEE
T ss_pred             CCCEEEECCCCCCCCCh----hhCCHHH-HHHH------------HHHHHHHHHHHHHHHHHHHHhcCC-----CEEEEE
Confidence            57999999997531100    0000000 0000            001112233344544444443322     455544


Q ss_pred             hhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          156 GSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++..             +..+......|..+|.+...+++.++.++++.++++|+|+||+..++.
T Consensus       145 sS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  196 (253)
T 2nm0_A          145 SSVV-------------GLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDM  196 (253)
T ss_dssp             CCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred             Cchh-------------hCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence            4332             222334456677777776668888889999999999999999876554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.78  E-value=6.3e-19  Score=143.49  Aligned_cols=131  Identities=16%  Similarity=0.163  Sum_probs=93.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc-cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK-KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+. ..++.++.+|++|+++++++++    
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998     333322 12221 1468899999999999888776    


Q ss_pred             ---CcCEEEEcCCCccc-------------------h----hHHHHHHHHHHhCCc-ceeee-ccccCCCCccccCCCCc
Q 044721           76 ---QVDVVISTVGHTLL-------------------G----DQVKIIAAIKEAGNI-KRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~-------------------~----~~~~l~~~~~~~~~~-~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                         ++|+||||||....                   .    .++.+++.+.+.+ . +++++ ||......    ..+..
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~----~~~~~  153 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVG----DPSLG  153 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSC----CTTCH
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccC----CCCCc
Confidence               59999999996531                   1    1234455555556 6 67764 55432211    12356


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+.+.
T Consensus       154 ~Y~~sK~a~~~~~~~  168 (251)
T 1zk4_A          154 AYNASKGAVRIMSKS  168 (251)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHH
Confidence            788899988886653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.78  E-value=1e-19  Score=148.62  Aligned_cols=81  Identities=17%  Similarity=0.183  Sum_probs=66.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+ +.++..+++|++|+++++++++     
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999998     4333322 222 4568889999999999887775     


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|+||||||...
T Consensus        78 ~g~id~lv~~Ag~~~   92 (253)
T 1hxh_A           78 LGTLNVLVNNAGILL   92 (253)
T ss_dssp             HCSCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence              5799999999753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.78  E-value=2.3e-19  Score=147.64  Aligned_cols=176  Identities=17%  Similarity=0.083  Sum_probs=113.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|+++.++.    .+..+ ..+.+  ...++.++.+|++|+++++++++    
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD----AAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999998776542    22222 22222  13578899999999999888776    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|+||||||......    ...-.+...+.+                     ....+...+.....++++.+    
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~~~~~~----  155 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTN---------------------LDSFYNVIQPCIMPMIGARQ----  155 (267)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTS----
T ss_pred             HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHhcCC----
Confidence               7999999999764111    111111111111                     02233345555555543332    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .++++++++....             .+......|..+|.+...+++.++.++++.++++|+|+||...++.
T Consensus       156 ~g~iv~isS~~~~-------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  214 (267)
T 4iiu_A          156 GGRIITLSSVSGV-------------MGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM  214 (267)
T ss_dssp             CEEEEEECCHHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred             CcEEEEEcchHhc-------------cCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence            2555555554422             1223345566666666667788888899999999999999876553

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.78  E-value=7.8e-19  Score=139.47  Aligned_cols=133  Identities=15%  Similarity=0.263  Sum_probs=109.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|+|+||||+|+||+++++.|+++|+  +|++++|++..            ...++.++.+|++|++++.+++  +|+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~d~v   69 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--IDTA   69 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--CSEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--hcEE
Confidence            467999999999999999999999998  99999998532            1246778899999999888877  9999


Q ss_pred             EEcCCCcc-------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           81 ISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        81 v~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      ||+||...             +..+.++++++.+.+ ++++++ |+.+...      .+...|..+|.++|++++..+++
T Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~------~~~~~y~~sK~~~e~~~~~~~~~  142 (215)
T 2a35_A           70 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA------KSSIFYNRVKGELEQALQEQGWP  142 (215)
T ss_dssp             EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------TCSSHHHHHHHHHHHHHTTSCCS
T ss_pred             EECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC------CCccHHHHHHHHHHHHHHHcCCC
Confidence            99999753             345688999999998 898875 6655432      23568999999999999999999


Q ss_pred             -EEEEeccCch
Q 044721          147 -YTYGDVLNHG  156 (263)
Q Consensus       147 -~~~gr~~n~~  156 (263)
                       +++.|..++.
T Consensus       143 ~~~~vrp~~v~  153 (215)
T 2a35_A          143 QLTIARPSLLF  153 (215)
T ss_dssp             EEEEEECCSEE
T ss_pred             eEEEEeCceee
Confidence             9999877643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.77  E-value=1.1e-18  Score=141.58  Aligned_cols=79  Identities=22%  Similarity=0.293  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc---CcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK---QVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   78 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+  .+..++.+|++|+++++++++   ++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVREC--PGIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc--CCCCEEEEeCCCHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999998     4333322 222  356778999999999999886   589


Q ss_pred             EEEEcCCCcc
Q 044721           79 VVISTVGHTL   88 (263)
Q Consensus        79 ~vv~~a~~~~   88 (263)
                      +||||||...
T Consensus        79 ~vi~~Ag~~~   88 (244)
T 3d3w_A           79 LLVNNAAVAL   88 (244)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCccCC
Confidence            9999999653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.77  E-value=1.4e-18  Score=143.50  Aligned_cols=131  Identities=15%  Similarity=0.147  Sum_probs=90.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhcc-CCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKK-LGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     ..+.+ ..+.+.. .++.++.+|++|+++++++++     
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----hhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999998     33322 1222211 268899999999999988876     


Q ss_pred             --CcCEEEEcCCCcc---------------------chhHHHHHHHHHH----hCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 --QVDVVISTVGHTL---------------------LGDQVKIIAAIKE----AGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 --~~d~vv~~a~~~~---------------------~~~~~~l~~~~~~----~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                        ++|+||||||...                     +..+.++++++..    .+ .+++++ ||.......   ..+..
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~  165 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG---EGVSH  165 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC---TTSCH
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCC---CCCCc
Confidence              7999999998642                     1122344444433    35 567763 544322111   01355


Q ss_pred             hHHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVEA  142 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~  142 (263)
                      .|..+|.+++.+++.
T Consensus       166 ~Y~~sK~a~~~~~~~  180 (278)
T 2bgk_A          166 VYTATKHAVLGLTTS  180 (278)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHH
Confidence            788899988886643

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.77  E-value=2.7e-19  Score=146.18  Aligned_cols=79  Identities=20%  Similarity=0.262  Sum_probs=64.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +|+++||||+|+||++++++|+++|  +.|++.+|+     .++.+.+....+.++..+.+|++|+++++++++      
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS-----EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC-----HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC-----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            5899999999999999999999985  678888888     444433322224568899999999999988776      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|++|||||..
T Consensus        77 g~id~lvnnAg~~   89 (254)
T 3kzv_A           77 GKIDSLVANAGVL   89 (254)
T ss_dssp             SCCCEEEEECCCC
T ss_pred             CCccEEEECCccc
Confidence             789999999974

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.77  E-value=2.1e-18  Score=145.00  Aligned_cols=134  Identities=11%  Similarity=0.071  Sum_probs=92.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vv   81 (263)
                      +|+||||||||+||+++++.|+++|++|++++|+..     .         ++  ++.+|++|++++.+++++  +|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~---------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA-----R---------PK--FEQVNLLDSNAVHHIIHDFQPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC-----C---------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence            579999999999999999999999999999998732     1         12  678999999999998884  99999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecccc---C---CCCccccCCCCchHHHHHHHHHHH
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSEFG---N---DVDRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~~g---~---~~~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      |+||...               +..+.++++++.+.+ + ++| +|+..   .   ..++..+..|.+.|+.+|.++|.+
T Consensus        66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  143 (315)
T 2ydy_A           66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKA  143 (315)
T ss_dssp             ECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            9998753               345689999999998 7 555 45432   2   123445566788999999999999


Q ss_pred             HHHcCCCEEEEeccCc
Q 044721          140 VEAEGIPYTYGDVLNH  155 (263)
Q Consensus       140 ~~~~~~~~~~gr~~n~  155 (263)
                      ++..+.++++.|+.+.
T Consensus       144 ~~~~~~~~~~lR~~~v  159 (315)
T 2ydy_A          144 VLENNLGAAVLRIPIL  159 (315)
T ss_dssp             HHHHCTTCEEEEECSE
T ss_pred             HHHhCCCeEEEeeeee
Confidence            9998999988886653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.77  E-value=6.4e-20  Score=152.40  Aligned_cols=190  Identities=13%  Similarity=0.094  Sum_probs=120.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCC-------cchhh-hhhhh--ccCCcEEEEccCCCHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-------PSKSQ-LLDHF--KKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~-~~~~~--~~~~~~~~~~D~~~~~~~~   71 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.....       ....+ ....+  .+.++..+.+|++|+++++
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            35789999999999999999999999999999998732210       11111 11111  1456889999999999988


Q ss_pred             HHhc-------CcCEEEEcCCCccch--hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHH
Q 044721           72 KAIK-------QVDVVISTVGHTLLG--DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~--~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                      ++++       ++|+||||||.....  ....-++...+.+                     ....+..++.....+ + 
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~~~~~-~-  144 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVD---------------------FVGVINTVHAALPYL-T-  144 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHH---------------------THHHHHHHHHHGGGC-C-
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhh---------------------hhhhHHHHHHHHHHh-h-
Confidence            8776       799999999976421  0001111111111                     122233344333322 1 


Q ss_pred             cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          143 EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       143 ~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                      .     .++++|+++...........  ............|..+|.+...+++.++.++++.+|+||+|+||+..++..
T Consensus       145 ~-----~g~iv~isS~~~~~~~~~~~--~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          145 S-----GASIITTGSVAGLIAAAQPP--GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             T-----TCEEEEECCHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             c-----CcEEEEeccchhcccccccc--cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            1     14555555544322211100  001122356678999999998899999999999999999999998776653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.77  E-value=7.2e-19  Score=147.44  Aligned_cols=81  Identities=16%  Similarity=0.254  Sum_probs=64.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCH-HHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNH-ESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~-~~~~~~~~-   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+   ...++.++.+|++|+ ++++++++ 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~   84 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD-----VTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADF   84 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHH
Confidence            356899999999999999999999999999999999     33322 22222   234688999999997 77766654 


Q ss_pred             ------CcCEEEEcCCCc
Q 044721           76 ------QVDVVISTVGHT   87 (263)
Q Consensus        76 ------~~d~vv~~a~~~   87 (263)
                            ++|+||||||..
T Consensus        85 ~~~~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           85 IKTHFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHHHHSSCCEEEECCCCC
T ss_pred             HHHhCCCCCEEEECCccc
Confidence                  799999999975

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=4.2e-19  Score=143.42  Aligned_cols=74  Identities=26%  Similarity=0.238  Sum_probs=61.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |++|+++||||+|+||+++++.|+++|++|++++|+....     +       .....+.+|++|+++++++++      
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-----~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----A-------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----S-------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc-----c-------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999985321     1       124567899999998887765      


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        69 ~~g~id~lv~~Ag~~   83 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGW   83 (236)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             CCCCCCEEEECCccc
Confidence               799999999964

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.77  E-value=3.6e-19  Score=145.35  Aligned_cols=134  Identities=19%  Similarity=0.143  Sum_probs=89.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCH-HHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNH-ESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++ |++++|+..   .+..+.+... .+.++.++.+|++|+ ++++++++   
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~---~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN---PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC---HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch---HHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            56789999999999999999999999997 999999842   1222222222 123578899999998 88877665   


Q ss_pred             ----CcCEEEEcCCCcc-----------chhHHHHHHHHHHhC------Ccceee-eccccCCCCccccCCCCchHHHHH
Q 044721           76 ----QVDVVISTVGHTL-----------LGDQVKIIAAIKEAG------NIKRFF-PSEFGNDVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        76 ----~~d~vv~~a~~~~-----------~~~~~~l~~~~~~~~------~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k  133 (263)
                          ++|+||||||...           +..+.++++++....      ...+++ +||......    ......|..+|
T Consensus        80 ~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK  155 (254)
T 1sby_A           80 DQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----IHQVPVYSASK  155 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----CTTSHHHHHHH
T ss_pred             HhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC----CCCchHHHHHH
Confidence                7999999999754           222344455444321      013455 454332111    12245688888


Q ss_pred             HHHHHHHHH
Q 044721          134 AKIRRAVEA  142 (263)
Q Consensus       134 ~~~e~~~~~  142 (263)
                      .+++.+.+.
T Consensus       156 ~a~~~~~~~  164 (254)
T 1sby_A          156 AAVVSFTNS  164 (254)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888886554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.77  E-value=2.6e-18  Score=150.55  Aligned_cols=148  Identities=17%  Similarity=0.205  Sum_probs=108.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh------------hhhccCCcEEEEccCCCHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL------------DHFKKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~~~~~~D~~~~~~~   70 (263)
                      ++|+||||||||+||+++++.|++.|++|++++|+....  ...+.+            ......++.++.+|++|++++
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE--IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHH--HHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChH--HHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            467999999999999999999999999999999995310  011111            011236789999999998888


Q ss_pred             HHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccC-----------CCCcccc---C
Q 044721           71 VKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGN-----------DVDRVHA---V  123 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~-----------~~~~~~~---~  123 (263)
                      . .+.++|+|||+|+...            +..+.++++++.+ + ++++|+ |+...           ...+..+   .
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~  222 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQ  222 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccccccCC
Confidence            7 7889999999999763            3456899999988 6 788874 65443           0122222   3


Q ss_pred             CCCchHHHHHHHHHHHHHH---cCCCEEEEeccCc
Q 044721          124 EPAKSAFATKAKIRRAVEA---EGIPYTYGDVLNH  155 (263)
Q Consensus       124 ~~~~~~~~~k~~~e~~~~~---~~~~~~~gr~~n~  155 (263)
                      .+.+.|..+|..+|.++++   .++++++.|..++
T Consensus       223 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v  257 (427)
T 4f6c_A          223 LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNL  257 (427)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCee
Confidence            4678999999999999976   7999998886553

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.77  E-value=1.2e-19  Score=148.35  Aligned_cols=95  Identities=14%  Similarity=0.091  Sum_probs=70.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~   79 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+...     .+      .   . +.+|++|.++++++++    ++|+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-----~~------~---~-~~~Dl~~~~~v~~~~~~~~~~id~   65 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----VI------A---D-LSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----EE------C---C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh-----hc------c---c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence            4689999999999999999999999999999998432     11      0   1 5689999999999886    4599


Q ss_pred             EEEcCCCcc------------chhHHHHHH----HHHHhCCcceeee-cccc
Q 044721           80 VISTVGHTL------------LGDQVKIIA----AIKEAGNIKRFFP-SEFG  114 (263)
Q Consensus        80 vv~~a~~~~------------~~~~~~l~~----~~~~~~~~~~~i~-S~~g  114 (263)
                      ||||||...            +..+.++.+    .+.+.+ .+++|. ||..
T Consensus        66 lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~  116 (257)
T 1fjh_A           66 LVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVA  116 (257)
T ss_dssp             EEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGG
T ss_pred             EEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChh
Confidence            999999764            122334444    444555 677774 5543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.77  E-value=1.7e-19  Score=152.40  Aligned_cols=178  Identities=15%  Similarity=0.052  Sum_probs=121.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCC------CCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST------LSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..      .......+..+.+.  +.++..+.+|++|++++++++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            4689999999999999999999999999999998721      00011111222222  345788999999999988877


Q ss_pred             c-------CcCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           75 K-------QVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        75 ~-------~~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                      +       ++|+||||||.....    ....-++...+.+                     ....+..++.....+.+..
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~~~~~~~~~~~~~~  164 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVH---------------------LKGHFATMRHAAAYWRGLS  164 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHcc
Confidence            6       799999999976421    1111122222221                     1234555666666554322


Q ss_pred             C-CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCC
Q 044721          144 G-IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPA  214 (263)
Q Consensus       144 ~-~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg  214 (263)
                      . -.-..|+++|++|....             .+..+...|..+|.+...+++.++.++++.+|+||+|+||
T Consensus       165 ~~~~~~~g~IV~isS~~~~-------------~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  223 (322)
T 3qlj_A          165 KAGKAVDGRIINTSSGAGL-------------QGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS  223 (322)
T ss_dssp             HTTCCCCEEEEEECCHHHH-------------HCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ccCCCCCcEEEEEcCHHHc-------------cCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC
Confidence            0 00012677777776632             3344567899999999889999999999999999999999

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.77  E-value=6.4e-19  Score=145.99  Aligned_cols=179  Identities=15%  Similarity=0.094  Sum_probs=123.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~   76 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++++|++|.++++++++      +
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLA-----AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999998     444443322225678999999999999988876      6


Q ss_pred             cCEEEEc-CCCccch---------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC-
Q 044721           77 VDVVIST-VGHTLLG---------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI-  145 (263)
Q Consensus        77 ~d~vv~~-a~~~~~~---------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~-  145 (263)
                      +|++||| ++.....         ....-++...+.+                     ....+...+.....+.+.... 
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~l~~~~~~~~~~~~~~~  162 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLY---------------------LNGTYNVARLVAASIAAAEPRE  162 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHTSCCCT
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHhhcccc
Confidence            8999999 4443210         0111111111111                     123344556555554431100 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      .-..|+++++++..             +..+......|..+|.+...+++.++.+++..++++|+|+||...++.
T Consensus       163 ~~~~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  224 (281)
T 3ppi_A          163 NGERGALVLTASIA-------------GYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI  224 (281)
T ss_dssp             TSCCEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             cCCCeEEEEEeccc-------------ccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence            00136666665554             334455678899999999889999999999999999999999876654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.77  E-value=2.9e-18  Score=144.22  Aligned_cols=140  Identities=20%  Similarity=0.255  Sum_probs=104.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +|+||||||||+||+++++.|+++|++|++++|+..... ...+.+.. ....++.++.+|++          ++|+|||
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~   75 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPM-IPPEGTGKFLEKPVLELEERDLS----------DVRLVYH   75 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCS-SCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc-cchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence            789999999999999999999999999999999864210 01111111 11234556666665          8999999


Q ss_pred             cCCCcc--------------chhHHHHHHHHHHhCCcceeee-cc---ccC----CCCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGN----DVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~----~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +|+...              +..+.++++++.+.+ ++++|+ |+   |+.    ..++..+..|.+.|+.+|..+|+++
T Consensus        76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999764              345688999999999 999985 54   333    2345566777899999999999998


Q ss_pred             HH----cCC-CEEEEeccCc
Q 044721          141 EA----EGI-PYTYGDVLNH  155 (263)
Q Consensus       141 ~~----~~~-~~~~gr~~n~  155 (263)
                      +.    .++ ++++.|..++
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v  174 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNV  174 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEE
T ss_pred             HHHHHHcCCCceEEEEeccc
Confidence            65    588 9998886654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.76  E-value=1.8e-18  Score=142.50  Aligned_cols=80  Identities=20%  Similarity=0.190  Sum_probs=64.9

Q ss_pred             CCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcch-hhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK-SQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||  +|+||+++++.|+++|++|++++|+.     ++ .+.+....+.++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-----LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC-----HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh-----HHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999  99999999999999999999999983     22 122222123467889999999999888776    


Q ss_pred             ------CcCEEEEcCCCc
Q 044721           76 ------QVDVVISTVGHT   87 (263)
Q Consensus        76 ------~~d~vv~~a~~~   87 (263)
                            ++|+||||||..
T Consensus        81 ~~g~~~~iD~lv~nAg~~   98 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFM   98 (269)
T ss_dssp             HHCTTCCEEEEEECCCCC
T ss_pred             HhCCCCCceEEEECCccC
Confidence                  799999999965

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.76  E-value=3.2e-19  Score=148.16  Aligned_cols=83  Identities=13%  Similarity=0.077  Sum_probs=64.3

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++..+.+|++|+++++++++    
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L-EKRVREIAKG-FGSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHHHh-cCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            346899999999  99999999999999999999999842 0 1122211111 1347889999999999888775    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        96 ~~g~iD~lv~~Ag~~  110 (285)
T 2p91_A           96 NWGSLDIIVHSIAYA  110 (285)
T ss_dssp             HTSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               789999999965

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.76  E-value=3e-18  Score=145.43  Aligned_cols=150  Identities=20%  Similarity=0.217  Sum_probs=107.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +|+||||||+||||+++++.|+++|++|+++.|+.....  +...+..+ ...++.++++|++|++++.++++++|+|||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   86 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK--KVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH   86 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTT--TTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhh--hHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence            578999999999999999999999999999999854321  11111111 134678899999999999999999999999


Q ss_pred             cCCCcc--------------chhHHHHHHHHHHhCCcceeee-cccc----C-------CCCccc--------cCCCC-c
Q 044721           83 TVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SEFG----N-------DVDRVH--------AVEPA-K  127 (263)
Q Consensus        83 ~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~~g----~-------~~~~~~--------~~~~~-~  127 (263)
                      +|+...              +.++.++++++.+.+.++++|+ ||..    .       ..++..        +.+|. .
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            998642              2346789999988732788885 5432    0       112221        11111 2


Q ss_pred             hHHHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          128 SAFATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       128 ~~~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      .|..+|..+|.++.    +.++++++.|..+.
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v  198 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLM  198 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCce
Confidence            59999999998774    35899998886654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.76  E-value=4.9e-19  Score=144.52  Aligned_cols=84  Identities=12%  Similarity=0.127  Sum_probs=64.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |+++|+++||||+|+||+++++.|+++|++|+++.++.    .++.+ ....+.  ..++..+.+|++|.++++++++  
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR----KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL   79 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----SHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc----hHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence            67789999999999999999999999999998875543    22222 222221  3457889999999998887765  


Q ss_pred             -----------CcCEEEEcCCCcc
Q 044721           76 -----------QVDVVISTVGHTL   88 (263)
Q Consensus        76 -----------~~d~vv~~a~~~~   88 (263)
                                 ++|++|||||...
T Consensus        80 ~~~~~~~~~~~~id~lv~nAg~~~  103 (255)
T 3icc_A           80 DNELQNRTGSTKFDILINNAGIGP  103 (255)
T ss_dssp             HHHHHHHHSSSCEEEEEECCCCCC
T ss_pred             HHHhcccccCCcccEEEECCCCCC
Confidence                       2999999999753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.76  E-value=1.1e-18  Score=144.63  Aligned_cols=175  Identities=13%  Similarity=0.055  Sum_probs=106.6

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+  ++||+++++.|+++|++|++++|+..   .+..+.+... ..++.++.+|++|.++++++++    
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF---KDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVELGK   99 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC---HHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH---HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHHHH
Confidence            357899999999  45999999999999999999999841   2333322222 2458899999999999888775    


Q ss_pred             ---CcCEEEEcCCCccch---------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           76 ---QVDVVISTVGHTLLG---------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~---------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                         ++|+||||||.....         ....-++...+.+                     ....+..++.....+.+. 
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N---------------------~~~~~~l~~~~~~~~~~~-  157 (280)
T 3nrc_A          100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDIS---------------------AYSFAALAKEGRSMMKNR-  157 (280)
T ss_dssp             HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHTTT-
T ss_pred             HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHhhcC-
Confidence               579999999976421         0000011111111                     011222233332222111 


Q ss_pred             CCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          144 GIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       144 ~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +     ++++++++..             +..+......|..+|.+...+++.++.++++.++++|+|+||...++.
T Consensus       158 ~-----g~iv~isS~~-------------~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  216 (280)
T 3nrc_A          158 N-----ASMVALTYIG-------------AEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA  216 (280)
T ss_dssp             T-----CEEEEEECGG-------------GTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred             C-----CeEEEEeccc-------------cccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence            1     2333322222             122233334455555555556777778899999999999999876544

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.76  E-value=5.8e-18  Score=140.43  Aligned_cols=127  Identities=17%  Similarity=0.185  Sum_probs=105.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+||||||||+||+++++.|+++|++|++++|.                       ++|++|.+++.++++  ++|+|||
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~vi~   62 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHIIIH   62 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence            489999999999999999999999999999985                       279999999999998  7999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCC----CCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGND----VDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +|+...               +..+.++++++.+.+ ++.+++|+   |+..    .++..+..|.+.|+.+|.++|+++
T Consensus        63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  141 (287)
T 3sc6_A           63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFV  141 (287)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999765               234678999999999 85333454   3322    245566778899999999999999


Q ss_pred             HHcCCCEEEEeccCc
Q 044721          141 EAEGIPYTYGDVLNH  155 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~  155 (263)
                      +..+.++++.|..+.
T Consensus       142 ~~~~~~~~ilR~~~v  156 (287)
T 3sc6_A          142 KELHNKYFIVRTSWL  156 (287)
T ss_dssp             HHHCSSEEEEEECSE
T ss_pred             HHhCCCcEEEeeeee
Confidence            998889998887664

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.76  E-value=1.2e-18  Score=143.42  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=66.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      |+++|+++||||+|+||+++++.|++ .|++|++++|+     .++.+ ..+.+.  +.++.++.+|++|.++++++++ 
T Consensus         1 ~~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   75 (276)
T 1wma_A            1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF   75 (276)
T ss_dssp             -CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC-----hHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence            56789999999999999999999999 99999999998     33322 112221  3468899999999999988876 


Q ss_pred             ------CcCEEEEcCCCc
Q 044721           76 ------QVDVVISTVGHT   87 (263)
Q Consensus        76 ------~~d~vv~~a~~~   87 (263)
                            ++|+||||||..
T Consensus        76 ~~~~~g~id~li~~Ag~~   93 (276)
T 1wma_A           76 LRKEYGGLDVLVNNAGIA   93 (276)
T ss_dssp             HHHHHSSEEEEEECCCCC
T ss_pred             HHHhcCCCCEEEECCccc
Confidence                  899999999965

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.76  E-value=3e-18  Score=139.54  Aligned_cols=150  Identities=17%  Similarity=0.199  Sum_probs=100.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC-CHHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL-NHESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~v   80 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     ++..   +.+  .++..+ +|+. +.+.+.+.+.++|+|
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~---~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELL---KRS--GHRYVV-CDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHT--CSEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHH---Hhh--CCeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence            357899999999999999999999999999999998     3222   222  245666 9993 233343444489999


Q ss_pred             EEcCCCccch-----------------------hHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHH
Q 044721           81 ISTVGHTLLG-----------------------DQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        81 v~~a~~~~~~-----------------------~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~  136 (263)
                      |||||.....                       .++.+++.+.+.+ .+++|. ||......    ..+...|..+|.++
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~  160 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP----IENLYTSNSARMAL  160 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTBHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCC----CCCCchHHHHHHHH
Confidence            9999965311                       1234455565666 566663 44322111    11244566677766


Q ss_pred             HHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCc
Q 044721          137 RRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKS  216 (263)
Q Consensus       137 e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~  216 (263)
                      +.                                                      +++.++.++++.++++|+|+||..
T Consensus       161 ~~------------------------------------------------------~~~~la~e~~~~gi~v~~v~Pg~v  186 (249)
T 1o5i_A          161 TG------------------------------------------------------FLKTLSFEVAPYGITVNCVAPGWT  186 (249)
T ss_dssp             HH------------------------------------------------------HHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             HH------------------------------------------------------HHHHHHHHhhhcCeEEEEEeeCCC
Confidence            66                                                      445556677888999999999987


Q ss_pred             chhcH
Q 044721          217 AFVTK  221 (263)
Q Consensus       217 ~~~~~  221 (263)
                      .++..
T Consensus       187 ~t~~~  191 (249)
T 1o5i_A          187 ETERV  191 (249)
T ss_dssp             CCTTH
T ss_pred             ccCcc
Confidence            76653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.76  E-value=2.2e-18  Score=139.73  Aligned_cols=80  Identities=23%  Similarity=0.216  Sum_probs=65.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   78 (263)
                      +++|+++||||+|+||++++++|+++|++|++++|+     +++.+.+... ..++.++.+|++|+++++++++   ++|
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAKE-CPGIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHh-ccCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            457899999999999999999999999999999998     3333221111 1356788999999999999886   589


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +||||||..
T Consensus        79 ~vi~~Ag~~   87 (244)
T 1cyd_A           79 LLVNNAALV   87 (244)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccc
Confidence            999999964

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.76  E-value=9.4e-18  Score=139.49  Aligned_cols=128  Identities=21%  Similarity=0.157  Sum_probs=105.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      .++||||||||+||+++++.|+++|++|++++|+                       .+|++|++++.++++  ++|+||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence            4789999999999999999999999999999887                       269999999999998  899999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCC----CCccccCCCCchHHHHHHHHHH
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGND----VDRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~  138 (263)
                      |+|+...               +..+.++++++.+.+ + ++| +|+   |+..    .++..+..|.+.|+.+|.++|.
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~  146 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN  146 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            9999764               234688999999999 8 666 455   3321    2445556678899999999999


Q ss_pred             HHHHcCCCEEEEeccCch
Q 044721          139 AVEAEGIPYTYGDVLNHG  156 (263)
Q Consensus       139 ~~~~~~~~~~~gr~~n~~  156 (263)
                      +++..+.++++.|..+..
T Consensus       147 ~~~~~~~~~~~lR~~~v~  164 (292)
T 1vl0_A          147 FVKALNPKYYIVRTAWLY  164 (292)
T ss_dssp             HHHHHCSSEEEEEECSEE
T ss_pred             HHHhhCCCeEEEeeeeee
Confidence            999988899988877654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.76  E-value=7.1e-18  Score=142.03  Aligned_cols=149  Identities=20%  Similarity=0.267  Sum_probs=104.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEc-CCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +|+||||||+||||+++++.|+++|++|+++.| +....  .+...+..+.  ..++.++.+|++|+++++++++++|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERK--RDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccch--hHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEE
Confidence            478999999999999999999999999999998 53211  1111111111  124678889999999999999999999


Q ss_pred             EEcCCCcc--------------chhHHHHHHHHHHh-CCcceeee-ccccC----CC-----Ccccc--------CCCCc
Q 044721           81 ISTVGHTL--------------LGDQVKIIAAIKEA-GNIKRFFP-SEFGN----DV-----DRVHA--------VEPAK  127 (263)
Q Consensus        81 v~~a~~~~--------------~~~~~~l~~~~~~~-~~~~~~i~-S~~g~----~~-----~~~~~--------~~~~~  127 (263)
                      ||+|+...              +.++.++++++.+. + ++++|+ ||...    ..     ++..+        ..|..
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           79 FHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             EECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccc
Confidence            99997532              23467888988887 7 888885 55331    10     11110        12222


Q ss_pred             -hHHHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          128 -SAFATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       128 -~~~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                       .|+.+|..+|.++.    ..++++++.|..+.
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v  190 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFI  190 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEE
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCce
Confidence             59999999998874    36899998876553

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.76  E-value=6.1e-18  Score=138.95  Aligned_cols=83  Identities=17%  Similarity=0.226  Sum_probs=66.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC---CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||++++++|+++|   ++|++++|+....  +..+.+... ..++.++.+|++|.++++++++   
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~--~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA--KELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC--HHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh--HHHHHhhcc-CCceEEEEecCCChHHHHHHHHHHH
Confidence            357899999999999999999999999   9999999985432  111111111 3578899999999999988876   


Q ss_pred             ------CcCEEEEcCCCc
Q 044721           76 ------QVDVVISTVGHT   87 (263)
Q Consensus        76 ------~~d~vv~~a~~~   87 (263)
                            ++|+||||||..
T Consensus        96 ~~~g~~~id~li~~Ag~~  113 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIA  113 (267)
T ss_dssp             HHHGGGCCSEEEECCCCC
T ss_pred             HhcCCCCccEEEECCCcC
Confidence                  799999999964

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.76  E-value=7.6e-19  Score=149.75  Aligned_cols=190  Identities=17%  Similarity=0.071  Sum_probs=116.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEcCCCCCCcc----------h-hhhhhhhccCCcEEEEccCCCHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPS----------K-SQLLDHFKKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------~-~~~~~~~~~~~~~~~~~D~~~~~~~~   71 (263)
                      +|+++||||+++||+++++.|++ +|++|++++|+.......          . .+.+.. .+..+..+.+|++|+++++
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCCceEEEECCCCCHHHHH
Confidence            68899999999999999999999 999999999875432111          0 111122 1446788999999999888


Q ss_pred             HHhc-------CcCEEEEcCCCccchhHHHHHHHHHHhCC-----ccee----------------eeccccCCC----Cc
Q 044721           72 KAIK-------QVDVVISTVGHTLLGDQVKIIAAIKEAGN-----IKRF----------------FPSEFGNDV----DR  119 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~~~~~~~~l~~~~~~~~~-----~~~~----------------i~S~~g~~~----~~  119 (263)
                      ++++       ++|+||||||......        -+.|.     .+.+                .-.++....    +.
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~--------p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~  197 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTH--------PKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDS  197 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEEC--------TTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccC--------ccccccccccccccccccccccccccccccccccCCCCCHHHHHH
Confidence            7765       6899999999641000        00000     0000                000000000    00


Q ss_pred             cccCCCCchH-HHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhH--HHHHHHHHhcCCceee
Q 044721          120 VHAVEPAKSA-FATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQ--VKIIAAIKEAGNVKRF  196 (263)
Q Consensus       120 ~~~~~~~~~~-~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  196 (263)
                      ...++....+ ..++......+.+.     -|+++|++|..             +.......  ..|.++|.+...++|.
T Consensus       198 ~v~Vn~~~~~~~~~~~~~~~~m~~~-----gG~IVniSSi~-------------~~~~~p~~~~~aY~AaKaal~~ltrs  259 (405)
T 3zu3_A          198 TVAVMGGEDWQMWIDALLDAGVLAE-----GAQTTAFTYLG-------------EKITHDIYWNGSIGAAKKDLDQKVLA  259 (405)
T ss_dssp             HHHHHSSHHHHHHHHHHHHHTCEEE-----EEEEEEEECCC-------------CGGGTTTTTTSHHHHHHHHHHHHHHH
T ss_pred             HHHhhchhHHHHHHHHHHHHhhhhC-----CcEEEEEeCch-------------hhCcCCCccchHHHHHHHHHHHHHHH
Confidence            0001111122 23333332222211     36666665544             33333333  7899999999899999


Q ss_pred             ccCCCCCC-ccccccCCCCCcchhc
Q 044721          197 FPSEFGND-VDRVNAVEPAKSAFVT  220 (263)
Q Consensus       197 ~~~~~~~~-~~~vn~v~pg~~~~~~  220 (263)
                      ++.+|++. +||||+|+||...++.
T Consensus       260 LA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          260 IRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             HHHHhCcccCeEEEEEEeCCCcCch
Confidence            99999999 9999999999766543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=1.6e-18  Score=142.91  Aligned_cols=82  Identities=16%  Similarity=0.178  Sum_probs=66.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+. .+.+.  +.++.++.+|++|+++++++++   
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC-----HHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999998     333221 12221  3468899999999999888775   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|+||||||...
T Consensus       104 ~~~g~iD~li~~Ag~~~  120 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVY  120 (272)
T ss_dssp             HHTCCCSEEEECCCCCC
T ss_pred             HHCCCCcEEEECCCcCC
Confidence                7899999999753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.76  E-value=1.7e-17  Score=140.92  Aligned_cols=143  Identities=17%  Similarity=0.100  Sum_probs=107.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-------CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG-------HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      +++|+||||||+||||+++++.|+++|       ++|++++|+......        ....++.++.+|++|++++.+++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence            467899999999999999999999999       899999998532210        11345788999999999999999


Q ss_pred             c-CcCEEEEcCCCcc--------------chhHHHHHHHHHHhC----Ccceeee-cc---ccCC----CCccccCCCCc
Q 044721           75 K-QVDVVISTVGHTL--------------LGDQVKIIAAIKEAG----NIKRFFP-SE---FGND----VDRVHAVEPAK  127 (263)
Q Consensus        75 ~-~~d~vv~~a~~~~--------------~~~~~~l~~~~~~~~----~~~~~i~-S~---~g~~----~~~~~~~~~~~  127 (263)
                      + ++|+|||+||...              +..+.++++++.+.+    .++++|+ ||   |+..    .+++.+.+|.+
T Consensus        84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~  163 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLT  163 (342)
T ss_dssp             HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSS
T ss_pred             hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcc
Confidence            4 8999999999753              234678888887763    2577774 54   3322    23445556788


Q ss_pred             hHHHHHHHHHHHHHHc----CCCEEEEec
Q 044721          128 SAFATKAKIRRAVEAE----GIPYTYGDV  152 (263)
Q Consensus       128 ~~~~~k~~~e~~~~~~----~~~~~~gr~  152 (263)
                      .|..+|.++|.++++.    +++++..|+
T Consensus       164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~  192 (342)
T 2hrz_A          164 SYGTQKAICELLLSDYSRRGFFDGIGIRL  192 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCceeEEe
Confidence            9999999999988643    566665553

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.76  E-value=4.8e-19  Score=145.59  Aligned_cols=84  Identities=13%  Similarity=0.128  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCCh--hHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGY--IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+  ||+++++.|+++|++|++++|+...  .+..+ ..+.....++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL--EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH--HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            5789999999976  9999999999999999999998321  11111 1222222378999999999999888775    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|++|||||...
T Consensus        84 ~~g~id~li~~Ag~~~   99 (266)
T 3oig_A           84 QVGVIHGIAHCIAFAN   99 (266)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCeeEEEEcccccc
Confidence               6899999999753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.75  E-value=4.4e-19  Score=145.46  Aligned_cols=83  Identities=20%  Similarity=0.196  Sum_probs=64.7

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++..+.+|++|+++++++++    
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-L-RPEAEKLAEA-LGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-G-HHHHHHHHHH-TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-H-HHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999  99999999999999999999999842 0 1122211111 1347889999999999888776    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        83 ~~g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFA   97 (261)
T ss_dssp             HHSSEEEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               789999999965

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.75  E-value=9e-19  Score=148.18  Aligned_cols=83  Identities=17%  Similarity=0.218  Sum_probs=64.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-----cCCcEEEEccCCCHHHHHHHhcC--
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----KLGVNLVIGDVLNHESLVKAIKQ--   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--   76 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+.... ....+.++...     ..++.++.+|++|.++++++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL-KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG-GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcH-HHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            67899999999999999999999999998888874332 11111111111     24688999999999999998874  


Q ss_pred             ---cCEEEEcCCCc
Q 044721           77 ---VDVVISTVGHT   87 (263)
Q Consensus        77 ---~d~vv~~a~~~   87 (263)
                         +|+||||||..
T Consensus        81 ~g~iD~lVnnAG~~   94 (327)
T 1jtv_A           81 EGRVDVLVCNAGLG   94 (327)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence               89999999865

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.75  E-value=4.8e-19  Score=146.36  Aligned_cols=83  Identities=13%  Similarity=0.096  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++.++.+|++|+++++++++    
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L-EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H-HHHHHHHHHh-cCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999  99999999999999999999999853 1 1122222111 1347889999999999888775    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus        81 ~~g~id~lv~nAg~~   95 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFA   95 (275)
T ss_dssp             HTSCEEEEEECCCCC
T ss_pred             HcCCCCEEEECCccC
Confidence               689999999965

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.75  E-value=1.9e-18  Score=141.57  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEc-CCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++| +     .++.+ ..+.+.  ..++.++.+|++|+++++++++   
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK-----EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC-----hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 5     32222 112221  3457889999999999888776   


Q ss_pred             ----CcCEEEEcCCCc
Q 044721           76 ----QVDVVISTVGHT   87 (263)
Q Consensus        76 ----~~d~vv~~a~~~   87 (263)
                          ++|+||||||..
T Consensus        81 ~~~g~id~li~~Ag~~   96 (261)
T 1gee_A           81 KEFGKLDVMINNAGLE   96 (261)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                799999999965

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.75  E-value=1.5e-18  Score=143.55  Aligned_cols=159  Identities=16%  Similarity=0.169  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.... ....+.+... +.++..+.+|++|+++++++++      
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD-EKAEHLQKTY-GVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH-HHHHHHHHHH-CSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhc-CCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999985321 1111111111 3568889999999999888776      


Q ss_pred             -CcCEEEEcCCCccc------h---------------h----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCch
Q 044721           76 -QVDVVISTVGHTLL------G---------------D----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKS  128 (263)
Q Consensus        76 -~~d~vv~~a~~~~~------~---------------~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~  128 (263)
                       ++|+||||||....      .               .    ++.+++.+.+.+ .+++|+ ||......  ....+...
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--~~~~~~~~  186 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIV--NIPQLQAP  186 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC-----CCHHH
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccC--CCCCCccc
Confidence             49999999986421      1               1    346666776666 677764 54332111  00223456


Q ss_pred             HHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCcccc
Q 044721          129 AFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRV  208 (263)
Q Consensus       129 ~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  208 (263)
                      |..+|.+++.+++                                                      .++.+++..+ ++
T Consensus       187 Y~~sK~a~~~~~~------------------------------------------------------~la~e~~~~~-~v  211 (279)
T 3ctm_A          187 YNTAKAACTHLAK------------------------------------------------------SLAIEWAPFA-RV  211 (279)
T ss_dssp             HHHHHHHHHHHHH------------------------------------------------------HHHHHTTTTC-EE
T ss_pred             HHHHHHHHHHHHH------------------------------------------------------HHHHHhcccC-CE
Confidence            7778887777544                                                      4556788888 99


Q ss_pred             ccCCCCCcchhc
Q 044721          209 NAVEPAKSAFVT  220 (263)
Q Consensus       209 n~v~pg~~~~~~  220 (263)
                      |+|.||...++.
T Consensus       212 ~~v~Pg~v~t~~  223 (279)
T 3ctm_A          212 NTISPGYIDTDI  223 (279)
T ss_dssp             EEEEECSBSSTT
T ss_pred             EEEeccCCcccc
Confidence            999999765543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.75  E-value=1.7e-17  Score=139.54  Aligned_cols=135  Identities=19%  Similarity=0.223  Sum_probs=106.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      +||||||+|+||+++++.|+++  |++|++++|+....             .++.++.+|++|++++.++++  ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence            5899999999999999999998  89999999874321             145788999999999999998  899999


Q ss_pred             EcCCCcc--------------chhHHHHHHHHHHhCCcceeee-cc---ccCC-----CCccccCCCCchHHHHHHHHHH
Q 044721           82 STVGHTL--------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND-----VDRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        82 ~~a~~~~--------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~-----~~~~~~~~~~~~~~~~k~~~e~  138 (263)
                      |+|+...              +..+.++++++.+.+ ++++|+ |+   |+..     .++..+.+|.+.|..+|.++|.
T Consensus        68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~  146 (317)
T 3ajr_A           68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAEL  146 (317)
T ss_dssp             ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHH
Confidence            9999753              234678999999998 988884 54   3321     1234455678899999999999


Q ss_pred             HHH----HcCCCEEEEeccC
Q 044721          139 AVE----AEGIPYTYGDVLN  154 (263)
Q Consensus       139 ~~~----~~~~~~~~gr~~n  154 (263)
                      +++    +.++++++.|..+
T Consensus       147 ~~~~~~~~~~~~~~~lR~~~  166 (317)
T 3ajr_A          147 LGQYYYEKFGLDVRSLRYPG  166 (317)
T ss_dssp             HHHHHHHHHCCEEEEEEECE
T ss_pred             HHHHHHHhcCCeEEEEecCc
Confidence            875    4588888877443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.75  E-value=6.2e-18  Score=141.52  Aligned_cols=129  Identities=16%  Similarity=0.178  Sum_probs=87.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh-------ccCCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF-------KKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-------~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+       ...++.++.+|++|+++++++
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            356899999999999999999999999999999998     333221 1221       134688999999999999888


Q ss_pred             hc-------CcCEEEEcCCCcc-------------------chhHHHHHHHHHH----hCCcceee-eccccCCCCcccc
Q 044721           74 IK-------QVDVVISTVGHTL-------------------LGDQVKIIAAIKE----AGNIKRFF-PSEFGNDVDRVHA  122 (263)
Q Consensus        74 ~~-------~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~----~~~~~~~i-~S~~g~~~~~~~~  122 (263)
                      ++       ++|+||||||...                   +..+.++++++..    .+ .++++ +|+... .    +
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~-~----~  164 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK-A----G  164 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT-T----C
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeecc-c----C
Confidence            76       5999999999542                   1223444554433    22 34555 354431 1    1


Q ss_pred             CCCCchHHHHHHHHHHHHH
Q 044721          123 VEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus       123 ~~~~~~~~~~k~~~e~~~~  141 (263)
                      ......|..+|.+++.+.+
T Consensus       165 ~~~~~~Y~~sK~a~~~~~~  183 (303)
T 1yxm_A          165 FPLAVHSGAARAGVYNLTK  183 (303)
T ss_dssp             CTTCHHHHHHHHHHHHHHH
T ss_pred             CCcchhhHHHHHHHHHHHH
Confidence            1124567778887776554

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.75  E-value=6.9e-19  Score=144.11  Aligned_cols=175  Identities=12%  Similarity=0.073  Sum_probs=106.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHH---CCCCEEEEEcCCCCCCcchhhh-hhhhc----cCCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVK---AGHPTFVLVRESTLSAPSKSQL-LDHFK----KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~   73 (263)
                      +++|+++||||+|+||+++++.|++   +|++|++++|+     .++.+. .+.+.    +.++..+.+|++|+++++++
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCC-----HHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence            4578999999999999999999999   89999999998     333322 22221    34578899999999988876


Q ss_pred             hc---------CcC--EEEEcCCCccc------h-hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHH
Q 044721           74 IK---------QVD--VVISTVGHTLL------G-DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        74 ~~---------~~d--~vv~~a~~~~~------~-~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~  135 (263)
                      ++         ++|  +||||||....      + ....-++...+.+                     ....+..++..
T Consensus        79 ~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~l~~~~  137 (259)
T 1oaa_A           79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALN---------------------LTSMLCLTSGT  137 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHH---------------------THHHHHHHHHH
T ss_pred             HHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHH---------------------HHHHHHHHHHH
Confidence            64         468  99999996421      0 0111111111111                     01222233333


Q ss_pred             HHHHHHH-cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCC
Q 044721          136 IRRAVEA-EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPA  214 (263)
Q Consensus       136 ~e~~~~~-~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg  214 (263)
                      ...+.++ .+    .|+++|++|..             +..+......|..+|.+...+++.++.++++  ++||+|+||
T Consensus       138 ~~~~~~~~~~----~g~iv~isS~~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG  198 (259)
T 1oaa_A          138 LNAFQDSPGL----SKTVVNISSLC-------------ALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPG  198 (259)
T ss_dssp             HHTSCCCTTC----EEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECC
T ss_pred             HHHHhhccCC----CceEEEEcCch-------------hcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCC
Confidence            3222111 01    24444444433             1122233445555555555577777788874  999999999


Q ss_pred             CcchhcH
Q 044721          215 KSAFVTK  221 (263)
Q Consensus       215 ~~~~~~~  221 (263)
                      +..++..
T Consensus       199 ~v~T~~~  205 (259)
T 1oaa_A          199 PLDNDMQ  205 (259)
T ss_dssp             SBSSHHH
T ss_pred             CcCcchH
Confidence            8876643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.75  E-value=6.5e-18  Score=150.05  Aligned_cols=150  Identities=15%  Similarity=0.167  Sum_probs=111.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC---CCCEEEEEcCCCCCCcchhhhh-hh--------------hccCCcEEEEccC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA---GHPTFVLVRESTLSAPSKSQLL-DH--------------FKKLGVNLVIGDV   64 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~D~   64 (263)
                      ++|+|+||||||+||+++++.|++.   |++|++++|+....  ...+.+ +.              ....++.++.+|+
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE--DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH--HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH--HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            4789999999999999999999999   89999999985321  111111 11              1135789999999


Q ss_pred             C------CHHHHHHHhcCcCEEEEcCCCcc-----------chhHHHHHHHHHHhCCcceeee-ccc---cCCC----Cc
Q 044721           65 L------NHESLVKAIKQVDVVISTVGHTL-----------LGDQVKIIAAIKEAGNIKRFFP-SEF---GNDV----DR  119 (263)
Q Consensus        65 ~------~~~~~~~~~~~~d~vv~~a~~~~-----------~~~~~~l~~~~~~~~~~~~~i~-S~~---g~~~----~~  119 (263)
                      +      |.+++.++++++|+|||+|+...           +..+.++++++.+.+ ++++|+ |+.   +...    .+
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E  228 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTE  228 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCS
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCC
Confidence            8      67789999999999999999753           456789999999988 888874 553   2211    22


Q ss_pred             cccCCC-----------CchHHHHHHHHHHHHHH----cCCCEEEEeccCc
Q 044721          120 VHAVEP-----------AKSAFATKAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       120 ~~~~~~-----------~~~~~~~k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      +.+..+           .+.|+.+|..+|.++++    .++++++.|..++
T Consensus       229 ~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v  279 (478)
T 4dqv_A          229 DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMI  279 (478)
T ss_dssp             SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             cccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECcee
Confidence            222212           24499999999999965    4899998876554

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.75  E-value=1.1e-18  Score=146.03  Aligned_cols=81  Identities=14%  Similarity=0.176  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc---cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+.+.   +.++.++.+|++|+++++++++  
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK-----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999998     33322 112221   4568899999999999888776  


Q ss_pred             -----CcCEEEEcCCCc
Q 044721           76 -----QVDVVISTVGHT   87 (263)
Q Consensus        76 -----~~d~vv~~a~~~   87 (263)
                           ++|+||||||..
T Consensus        99 ~~~~g~id~li~~Ag~~  115 (302)
T 1w6u_A           99 IKVAGHPNIVINNAAGN  115 (302)
T ss_dssp             HHHTCSCSEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence                 469999999964

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.75  E-value=2.8e-18  Score=139.11  Aligned_cols=128  Identities=14%  Similarity=0.134  Sum_probs=87.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchhhh-hhhhc--cCCcEE-EEccCCCHHHHHHHhc---
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQL-LDHFK--KLGVNL-VIGDVLNHESLVKAIK---   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~-~~~~~--~~~~~~-~~~D~~~~~~~~~~~~---   75 (263)
                      +|+++||||+|+||++++++|+++|++|+++ +|+     +++.+. .+.+.  +.++.. +.+|++|.++++++++   
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQN-----REKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAA   75 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC-----HHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999998 677     333221 12221  235666 8999999999888764   


Q ss_pred             ----CcCEEEEcCCCccc-------------------hh----HHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCc
Q 044721           76 ----QVDVVISTVGHTLL-------------------GD----QVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAK  127 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-------------------~~----~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~  127 (263)
                          ++|+||||||....                   ..    ++.+++.+.+.+ .+++++ ||......    ..+..
T Consensus        76 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~----~~~~~  150 (245)
T 2ph3_A           76 EVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILG----NPGQA  150 (245)
T ss_dssp             HHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC----CSSBH
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccC----CCCCc
Confidence                79999999996531                   11    345555666666 677764 54321110    11245


Q ss_pred             hHHHHHHHHHHHHH
Q 044721          128 SAFATKAKIRRAVE  141 (263)
Q Consensus       128 ~~~~~k~~~e~~~~  141 (263)
                      .|..+|.+++.+.+
T Consensus       151 ~Y~~sK~a~~~~~~  164 (245)
T 2ph3_A          151 NYVASKAGLIGFTR  164 (245)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHH
Confidence            67778887777554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.74  E-value=8.1e-19  Score=144.21  Aligned_cols=82  Identities=16%  Similarity=0.110  Sum_probs=63.9

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+  |+||+++++.|+++|++|++++|+. .. .+..+.+... ..+..++++|++|+++++++++     
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH-HHHHHHHHHh-cCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            35899999999  9999999999999999999999985 11 1222222111 1235788999999999988776     


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|+||||||..
T Consensus        85 ~g~iD~lv~~Ag~~   98 (265)
T 1qsg_A           85 WPKFDGFVHSIGFA   98 (265)
T ss_dssp             CSSEEEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              689999999965

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.74  E-value=6.1e-17  Score=137.52  Aligned_cols=142  Identities=23%  Similarity=0.335  Sum_probs=105.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vv~   82 (263)
                      |+|+||||||+||+++++.|+++ |++|++++|+..     +.+.+  ....++.++.+|++| .+.++++++++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-----~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD-----AISRF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG-----GGGGG--TTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcc-----hHHHh--hcCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            58999999999999999999998 899999999842     22211  113568899999998 4678889999999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCCC----CccccC-------CCCchHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGNDV----DRVHAV-------EPAKSAFAT  132 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~~----~~~~~~-------~~~~~~~~~  132 (263)
                      +|+...               +..+.++++++.+.+  +++| +|+   |+...    ++..+.       .|.+.|+.+
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~s  151 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS  151 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHH
Confidence            998654               234678899998876  5555 455   33221    222111       234589999


Q ss_pred             HHHHHHHHH----HcCCCEEEEeccCc
Q 044721          133 KAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       133 k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      |.++|++++    +.++++++.|..++
T Consensus       152 K~~~e~~~~~~~~~~~~~~~ilrp~~v  178 (345)
T 2bll_A          152 KQLLDRVIWAYGEKEGLQFTLFRPFNW  178 (345)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECSE
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence            999999984    45899998886664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.74  E-value=2e-18  Score=140.98  Aligned_cols=180  Identities=17%  Similarity=0.105  Sum_probs=119.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC-CCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE-STLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+ .... ....+.+... +.++.++.+|++|+++++++++      
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI-DETIASMRAD-GGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTH-HHHHHHHHHT-TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhH-HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999998 3321 1111111111 3467889999999999988887      


Q ss_pred             -CcCEEEEcCCC-ccc----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc---CCC
Q 044721           76 -QVDVVISTVGH-TLL----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE---GIP  146 (263)
Q Consensus        76 -~~d~vv~~a~~-~~~----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~---~~~  146 (263)
                       ++|+||||||. ...    .....-.+...+.+                     ....+..++.....+.++.   +. 
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~~~~~~~~~~~-  141 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDAN---------------------IRSVVMTTKFALPHLAAAAKASGQ-  141 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHHHHHTS-
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhc---------------------cHHHHHHHHHHHHHHHhcccCCCC-
Confidence             89999999996 321    11111122222221                     1233445666655554331   10 


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                        .+++++.++......            +......|..+|.+...+.+.++.+++..++++|++.||....+.
T Consensus       142 --~~~iv~~sS~~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  201 (258)
T 3afn_B          142 --TSAVISTGSIAGHTG------------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF  201 (258)
T ss_dssp             --CEEEEEECCTHHHHC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred             --CcEEEEecchhhccC------------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence              145555544432210            223456799999998889999999999999999999999776543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.74  E-value=4.5e-18  Score=141.24  Aligned_cols=80  Identities=23%  Similarity=0.329  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     +++.+ ..+.+.  +.++..+.+|++|+++++++++    
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999998887     33332 122221  3467889999999999988774    


Q ss_pred             ---CcCEEEEcCCCc
Q 044721           76 ---QVDVVISTVGHT   87 (263)
Q Consensus        76 ---~~d~vv~~a~~~   87 (263)
                         ++|+||||||..
T Consensus       118 ~~~~id~li~~Ag~~  132 (285)
T 2c07_A          118 EHKNVDILVNNAGIT  132 (285)
T ss_dssp             HCSCCCEEEECCCCC
T ss_pred             hcCCCCEEEECCCCC
Confidence               799999999975

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.74  E-value=8.6e-18  Score=140.13  Aligned_cols=129  Identities=20%  Similarity=0.172  Sum_probs=105.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vv~   82 (263)
                      |+|+||||||+||+++++.|+ +|++|++++|+.                   ..+.+|++|++++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-------------------KEFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-------------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence            489999999999999999999 899999999983                   1246899999999999986  999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCC----CCccccCCCCchHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGND----VDRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      +|+...               +..+.++++++.+.+ + +++ .|+   |+..    .++..+.+|.+.|+.+|.++|++
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            998754               234689999999888 7 455 454   3322    24555667788999999999999


Q ss_pred             HHHcCCCEEEEeccCc
Q 044721          140 VEAEGIPYTYGDVLNH  155 (263)
Q Consensus       140 ~~~~~~~~~~gr~~n~  155 (263)
                      ++..+.++++.|..+.
T Consensus       139 ~~~~~~~~~ilRp~~v  154 (299)
T 1n2s_A          139 LQDNCPKHLIFRTSWV  154 (299)
T ss_dssp             HHHHCSSEEEEEECSE
T ss_pred             HHHhCCCeEEEeeeee
Confidence            9988889998887664

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.74  E-value=1.8e-17  Score=135.08  Aligned_cols=71  Identities=18%  Similarity=0.220  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+....              ....+.+|++|.++++++++       
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999999999995321              12357889999999888775       


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|+||||||..
T Consensus        87 ~iD~li~~Ag~~   98 (251)
T 3orf_A           87 KVDTFVCAAGGW   98 (251)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            579999999964

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.74  E-value=6.9e-18  Score=139.03  Aligned_cols=133  Identities=16%  Similarity=0.112  Sum_probs=90.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.    .++.+ ..+.+.  +.++.++.+|++|+++++++++   
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999932    22222 112221  3567889999999999988876   


Q ss_pred             ----CcCEEEEcCCCcc-------------------chhHHHHHHHHHHhCC-cceee-eccccCC-CCccccCCCCchH
Q 044721           76 ----QVDVVISTVGHTL-------------------LGDQVKIIAAIKEAGN-IKRFF-PSEFGND-VDRVHAVEPAKSA  129 (263)
Q Consensus        76 ----~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~~-~~~~i-~S~~g~~-~~~~~~~~~~~~~  129 (263)
                          ++|+||||||...                   +..+.++++++...-. -+++| +||.... ..    ..+...|
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~~Y  170 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG----IPNHALY  170 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS----CCSCHHH
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC----CCCCchH
Confidence                8999999999653                   1223455555555410 13555 4554322 11    1225578


Q ss_pred             HHHHHHHHHHHHH
Q 044721          130 FATKAKIRRAVEA  142 (263)
Q Consensus       130 ~~~k~~~e~~~~~  142 (263)
                      ..+|.+++.+++.
T Consensus       171 ~~sK~a~~~~~~~  183 (274)
T 1ja9_A          171 AGSKAAVEGFCRA  183 (274)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            8899888886543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.74  E-value=1.5e-18  Score=142.83  Aligned_cols=83  Identities=13%  Similarity=0.085  Sum_probs=65.2

Q ss_pred             CCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            3 SKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         3 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++|+++||||+  |+||+++++.|+++|++|++++|+...  .+..+.+... ..++.++.+|++|+++++++++     
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAE-FGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh--HHHHHHHHHH-cCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999998  999999999999999999999998321  1122211111 2358899999999999988876     


Q ss_pred             --CcCEEEEcCCCcc
Q 044721           76 --QVDVVISTVGHTL   88 (263)
Q Consensus        76 --~~d~vv~~a~~~~   88 (263)
                        ++|++|||||...
T Consensus        90 ~g~id~lv~nAg~~~  104 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAP  104 (271)
T ss_dssp             CSCEEEEEECCCCCC
T ss_pred             cCCCCEEEECCccCc
Confidence              6899999999753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.74  E-value=2.4e-19  Score=143.66  Aligned_cols=63  Identities=22%  Similarity=0.288  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~   79 (263)
                      ++|+++||||+|+||++++++|+++|++|++++|+.     +                 +|++|+++++++++   ++|+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~-----------------~D~~~~~~v~~~~~~~g~id~   62 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT-----G-----------------LDISDEKSVYHYFETIGAFDH   62 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG-----T-----------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc-----c-----------------cCCCCHHHHHHHHHHhCCCCE
Confidence            468999999999999999999999999999999882     1                 79999999988876   7999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|||||..
T Consensus        63 lv~nAg~~   70 (223)
T 3uce_A           63 LIVTAGSY   70 (223)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999975

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.73  E-value=4.4e-17  Score=139.34  Aligned_cols=142  Identities=17%  Similarity=0.203  Sum_probs=106.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~   76 (263)
                      ++|+|+||||||+||+++++.|+++| ++|++++|+....   ..   ..+  .++. +.+|++|.++++++++     +
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~  115 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KF---VNL--VDLN-IADYMDKEDFLIQIMAGEEFGD  115 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGG---GG---GGT--TTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcc---hh---hcc--cCce-EeeecCcHHHHHHHHhhcccCC
Confidence            35789999999999999999999999 9999999874321   11   111  1233 6789999999999987     5


Q ss_pred             cCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceee-ecc---ccCC----CCccccCCCCchHHHHHHH
Q 044721           77 VDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGND----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        77 ~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~----~~~~~~~~~~~~~~~~k~~  135 (263)
                      +|+|||+|+...             +..+.++++++.+.+ + ++| +|+   |+..    .++..+.+|.+.|+.+|.+
T Consensus       116 ~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~  193 (357)
T 2x6t_A          116 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFL  193 (357)
T ss_dssp             CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHH
T ss_pred             CCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHH
Confidence            999999999753             234689999999999 8 766 454   3322    2445556678899999999


Q ss_pred             HHHHHHH----cCCCEEEEeccCc
Q 044721          136 IRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      +|.+++.    .++++++.|..++
T Consensus       194 ~E~~~~~~~~~~g~~~~ilRp~~v  217 (357)
T 2x6t_A          194 FDEYVRQILPEANSQIVGFRYFNV  217 (357)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEE
T ss_pred             HHHHHHHHHHHcCCCEEEEecCeE
Confidence            9999864    3789988886553

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.73  E-value=2.2e-17  Score=139.05  Aligned_cols=130  Identities=16%  Similarity=0.212  Sum_probs=102.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   79 (263)
                      |++|+||||||+|+||+++++.|+++|++|+++.|+.                      .+|++|.+++.++++  ++|+
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~   58 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQ   58 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCE
Confidence            3467999999999999999999999999999877661                      269999999999998  9999


Q ss_pred             EEEcCCCcc----------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccc----cCCCC-chHH
Q 044721           80 VISTVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVH----AVEPA-KSAF  130 (263)
Q Consensus        80 vv~~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~----~~~~~-~~~~  130 (263)
                      |||+|+...                +..+.++++++.+.+ ++++|+ |+   |+..    .++..    +..|. ..|+
T Consensus        59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~  137 (321)
T 1e6u_A           59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA  137 (321)
T ss_dssp             EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH
T ss_pred             EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH
Confidence            999999763                234678999999999 988884 54   3321    12222    34443 4899


Q ss_pred             HHHHHHHHHHHH----cCCCEEEEeccC
Q 044721          131 ATKAKIRRAVEA----EGIPYTYGDVLN  154 (263)
Q Consensus       131 ~~k~~~e~~~~~----~~~~~~~gr~~n  154 (263)
                      .+|.++|++++.    .++++++.|..+
T Consensus       138 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~  165 (321)
T 1e6u_A          138 IAKIAGIKLCESYNRQYGRDYRSVMPTN  165 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            999999999865    489998887554

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.73  E-value=1.3e-17  Score=139.69  Aligned_cols=134  Identities=16%  Similarity=0.121  Sum_probs=101.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~   79 (263)
                      |++|+||||||||+||+++++.|+++|+      +..     ..        ...+..+.+|++|++++.+++++  +|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----ED--------WVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----CE--------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----cc--------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence            5678999999999999999999999998      221     00        11234457899999999999986  999


Q ss_pred             EEEcCCCcc----------------chhHHHHHHHHHHhCCcceeee-ccc---cCC----CCccc----cCCCCc-hHH
Q 044721           80 VISTVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SEF---GND----VDRVH----AVEPAK-SAF  130 (263)
Q Consensus        80 vv~~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~~---g~~----~~~~~----~~~~~~-~~~  130 (263)
                      |||+|+...                +..+.++++++.+.+ ++++|+ |+.   +..    .++..    +..|.. +|.
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~  143 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYS  143 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHH
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHH
Confidence            999999753                334678999999999 999885 543   322    12222    444545 599


Q ss_pred             HHHHHHHHHHHH----cCCCEEEEeccCc
Q 044721          131 ATKAKIRRAVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       131 ~~k~~~e~~~~~----~~~~~~~gr~~n~  155 (263)
                      .+|..+|++++.    .++++++.|..+.
T Consensus       144 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v  172 (319)
T 4b8w_A          144 YAKRMIDVQNRAYFQQYGCTFTAVIPTNV  172 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHHhhCCCEEEEeeccc
Confidence            999999998854    6899998886653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.73  E-value=1e-16  Score=136.30  Aligned_cols=144  Identities=17%  Similarity=0.293  Sum_probs=104.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +++|+||||||||+||+++++.|+++|++|++++|+.... ....   ..+ ...++.++.+|+.+.     .+.++|+|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~---~~~~~~~~~~~~~~D~~~~-----~~~~~d~v   95 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNV---EHWIGHENFELINHDVVEP-----LYIEVDQI   95 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGT---GGGTTCTTEEEEECCTTSC-----CCCCCSEE
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhh---hhhccCCceEEEeCccCCh-----hhcCCCEE
Confidence            4578999999999999999999999999999999975322 1111   111 134688999999875     36789999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCCC----Ccc-----ccCCCCchHHHHH
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGNDV----DRV-----HAVEPAKSAFATK  133 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~~----~~~-----~~~~~~~~~~~~k  133 (263)
                      ||+|+...               +..+.++++++.+.+ ++.+++|+   |+...    ++.     .+..+.+.|+.+|
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  174 (343)
T 2b69_A           96 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGK  174 (343)
T ss_dssp             EECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHH
T ss_pred             EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHH
Confidence            99999754               233678999999998 74444454   33211    222     3445667899999


Q ss_pred             HHHHHHHH----HcCCCEEEEeccCc
Q 044721          134 AKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       134 ~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      .++|.+++    +.++++++.|..++
T Consensus       175 ~~~E~~~~~~~~~~~~~~~ilrp~~v  200 (343)
T 2b69_A          175 RVAETMCYAYMKQEGVEVRVARIFNT  200 (343)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred             HHHHHHHHHHHHHhCCcEEEEEEcce
Confidence            99999874    45899998886653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.73  E-value=4.6e-18  Score=137.77  Aligned_cols=80  Identities=24%  Similarity=0.265  Sum_probs=63.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchhhhh-hhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQLL-DHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +|+++||||+|+||++++++|+++|++|+++ .|+     +++.+.+ +.+  .+.++..+.+|++|+++++++++    
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS-----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999985 676     3332211 111  13467889999999999988876    


Q ss_pred             ---CcCEEEEcCCCcc
Q 044721           76 ---QVDVVISTVGHTL   88 (263)
Q Consensus        76 ---~~d~vv~~a~~~~   88 (263)
                         ++|+||||||...
T Consensus        76 ~~g~id~li~~Ag~~~   91 (244)
T 1edo_A           76 AWGTIDVVVNNAGITR   91 (244)
T ss_dssp             HSSCCSEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence               7999999999653

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.72  E-value=9.8e-18  Score=150.03  Aligned_cols=147  Identities=17%  Similarity=0.204  Sum_probs=109.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh----h--------hhhccCCcEEEEccCCCHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL----L--------DHFKKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~--------~~~~~~~~~~~~~D~~~~~~~   70 (263)
                      .+|+||||||||+||+++++.|.+.|++|++++|+....  ...+.    +        ......++.++.+|++|++++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE--IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHH--HHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChH--HHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            357999999999999999999999999999999985311  01110    0        111246899999999998877


Q ss_pred             HHHhcCcCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccC--C---------CCcccc---C
Q 044721           71 VKAIKQVDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGN--D---------VDRVHA---V  123 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~--~---------~~~~~~---~  123 (263)
                      . ++.++|+|||+|+...            +..+.++++++.+ + .+++++ |+.+.  .         ..+..+   .
T Consensus       227 ~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~  303 (508)
T 4f6l_B          227 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQ  303 (508)
T ss_dssp             C-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSB
T ss_pred             C-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCcccccccccccc
Confidence            7 7789999999999753            4567899999988 5 677774 65544  0         112222   3


Q ss_pred             CCCchHHHHHHHHHHHHHH---cCCCEEEEeccC
Q 044721          124 EPAKSAFATKAKIRRAVEA---EGIPYTYGDVLN  154 (263)
Q Consensus       124 ~~~~~~~~~k~~~e~~~~~---~~~~~~~gr~~n  154 (263)
                      .+.+.|..+|..+|+++++   .|+++++.|..+
T Consensus       304 ~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~  337 (508)
T 4f6l_B          304 LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGN  337 (508)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecce
Confidence            4678999999999999975   799999988655

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.72  E-value=4.8e-18  Score=138.36  Aligned_cols=123  Identities=12%  Similarity=0.074  Sum_probs=86.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----CcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----QVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~   79 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+...     .+       .   .+.+|++|+++++++++    ++|+
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~-------~---~~~~D~~~~~~~~~~~~~~~~~~d~   65 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD-----IE-------A---DLSTPGGRETAVAAVLDRCGGVLDG   65 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----EE-------C---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH-----cc-------c---cccCCcccHHHHHHHHHHcCCCccE
Confidence            4689999999999999999999999999999998432     11       0   15689999999998886    8999


Q ss_pred             EEEcCCCcc------------chhHHHHHHHHHHh----CCcceeee-ccccCCCCcc----------------------
Q 044721           80 VISTVGHTL------------LGDQVKIIAAIKEA----GNIKRFFP-SEFGNDVDRV----------------------  120 (263)
Q Consensus        80 vv~~a~~~~------------~~~~~~l~~~~~~~----~~~~~~i~-S~~g~~~~~~----------------------  120 (263)
                      ||||||...            +..+.++++++...    + .+++|+ ||........                      
T Consensus        66 vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (255)
T 2dkn_A           66 LVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE  144 (255)
T ss_dssp             EEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred             EEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence            999999754            23345666655443    5 677774 5533221110                      


Q ss_pred             ccCCCCchHHHHHHHHHHHHHH
Q 044721          121 HAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus       121 ~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                      ....+...|..+|.+++.+++.
T Consensus       145 ~~~~~~~~Y~~sK~a~~~~~~~  166 (255)
T 2dkn_A          145 QQGQTHLAYAGSKYAVTCLARR  166 (255)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcchhHHHHHHHHHHHHHH
Confidence            0012355788888888887654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.72  E-value=1.1e-17  Score=138.95  Aligned_cols=130  Identities=17%  Similarity=0.173  Sum_probs=87.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+   ...++.++.+|++|.++++++++  
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  100 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA  100 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998     4333321 111   12357889999999998887765  


Q ss_pred             -----CcCEEEEc-CCCcc------------------chhHHHHHHHH----HHhCCcceee-eccccCCCCccccCCCC
Q 044721           76 -----QVDVVIST-VGHTL------------------LGDQVKIIAAI----KEAGNIKRFF-PSEFGNDVDRVHAVEPA  126 (263)
Q Consensus        76 -----~~d~vv~~-a~~~~------------------~~~~~~l~~~~----~~~~~~~~~i-~S~~g~~~~~~~~~~~~  126 (263)
                           ++|++||| +|...                  +....++++++    .+.  .++++ +||.....    +..+.
T Consensus       101 ~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~----~~~~~  174 (286)
T 1xu9_A          101 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV----AYPMV  174 (286)
T ss_dssp             HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS----CCTTC
T ss_pred             HHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCccccc----CCCCc
Confidence                 79999999 56532                  11222333333    222  34555 45543221    11235


Q ss_pred             chHHHHHHHHHHHHHH
Q 044721          127 KSAFATKAKIRRAVEA  142 (263)
Q Consensus       127 ~~~~~~k~~~e~~~~~  142 (263)
                      ..|..+|.+++.+.+.
T Consensus       175 ~~Y~asK~a~~~~~~~  190 (286)
T 1xu9_A          175 AAYSASKFALDGFFSS  190 (286)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHH
Confidence            6788899988876653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=1.6e-17  Score=134.25  Aligned_cols=70  Identities=24%  Similarity=0.274  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------Cc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------QV   77 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~   77 (263)
                      +|+++||||+|+||+++++.|+++|++|++++|+..      .        .++.++.+|++|+++++++++      ++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------G--------EDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------S--------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc------c--------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            579999999999999999999999999999999842      1        235788999999999998887      89


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|||||..
T Consensus        68 d~li~~ag~~   77 (242)
T 1uay_A           68 FAVVSAAGVG   77 (242)
T ss_dssp             EEEEECCCCC
T ss_pred             eEEEEccccc
Confidence            9999999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.71  E-value=1e-16  Score=134.18  Aligned_cols=139  Identities=17%  Similarity=0.183  Sum_probs=105.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC-----cCE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ-----VDV   79 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~d~   79 (263)
                      +|+||||||+||+++++.|+++| ++|++++|+....   +..   .+.  ++. +.+|++|.+.+++++++     +|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~~---~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KFV---NLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG---GGH---HHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCc---hhh---hcC--cce-eccccccHHHHHHHHhccccCCCcE
Confidence            58999999999999999999999 9999999884321   111   111  223 67899999999999975     999


Q ss_pred             EEEcCCCcc-------------chhHHHHHHHHHHhCCcceee-eccc---cCC----CCccccCCCCchHHHHHHHHHH
Q 044721           80 VISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF-PSEF---GND----VDRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        80 vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i-~S~~---g~~----~~~~~~~~~~~~~~~~k~~~e~  138 (263)
                      |||+|+...             +..+.++++++.+.+ + ++| +|+.   +..    .++..+..|.+.|+.+|.++|.
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  149 (310)
T 1eq2_A           72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDE  149 (310)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHH
T ss_pred             EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            999998753             234689999999999 8 766 4543   322    2445566778899999999999


Q ss_pred             HHHH----cCCCEEEEeccCc
Q 044721          139 AVEA----EGIPYTYGDVLNH  155 (263)
Q Consensus       139 ~~~~----~~~~~~~gr~~n~  155 (263)
                      +++.    .++++++.|..++
T Consensus       150 ~~~~~~~~~g~~~~~lrp~~v  170 (310)
T 1eq2_A          150 YVRQILPEANSQIVGFRYFNV  170 (310)
T ss_dssp             HHHHHGGGCSSCEEEEEECEE
T ss_pred             HHHHHHHHcCCCEEEEeCCcE
Confidence            9864    3789998886553

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.71  E-value=2.7e-18  Score=135.64  Aligned_cols=123  Identities=15%  Similarity=0.136  Sum_probs=88.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc---CcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK---QVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~v   80 (263)
                      |+++||||+|+||++++++|+++  +|++++|+     +++.+.+ +.+ . . .++.+|++|+++++++++   ++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~-----~~~~~~~~~~~-~-~-~~~~~D~~~~~~~~~~~~~~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRR-----AGALAELAREV-G-A-RALPADLADELEAKALLEEAGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSC-----HHHHHHHHHHH-T-C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECC-----HHHHHHHHHhc-c-C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence            58999999999999999999999  99999998     4333322 222 1 2 788999999999999988   89999


Q ss_pred             EEcCCCcc-------------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           81 ISTVGHTL-------------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        81 v~~a~~~~-------------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      |||||...                   +..+.++++++.+.+ .+++++ |+....    .+..+...|..+|.+++.++
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~----~~~~~~~~Y~~sK~a~~~~~  145 (207)
T 2yut_A           71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRY----VQVPGFAAYAAAKGALEAYL  145 (207)
T ss_dssp             EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHH----HSSTTBHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhc----cCCCCcchHHHHHHHHHHHH
Confidence            99999653                   122345666664455 667774 543221    11233567888999988866


Q ss_pred             HH
Q 044721          141 EA  142 (263)
Q Consensus       141 ~~  142 (263)
                      +.
T Consensus       146 ~~  147 (207)
T 2yut_A          146 EA  147 (207)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.71  E-value=2e-18  Score=151.96  Aligned_cols=175  Identities=16%  Similarity=0.113  Sum_probs=105.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   75 (263)
                      ++++++||||+|+||+++++.|+++|++|++++|+.     ...+..+.....++.++.+|++|.++++++++       
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~-----~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-----AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG-----GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc-----cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999999873     21111111112356789999999998887765       


Q ss_pred             C-cCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 Q-VDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 ~-~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                      + +|+||||||.....    .+..-++...+.+                     ....+...+.....+.++.     .+
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~n---------------------v~g~~~l~~~~~~~~~~~~-----~g  340 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVN---------------------LLAPQRLTEGLVGNGTIGE-----GG  340 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHTTSSCT-----TC
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHhhhhcC-----CC
Confidence            4 99999999986411    0011111111111                     0111222222221111111     13


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                      +++|++|...             ..+..++..|.++|.....+++.++.+++..++++|+|+||+..++..
T Consensus       341 ~iV~iSS~a~-------------~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  398 (454)
T 3u0b_A          341 RVIGLSSMAG-------------IAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMT  398 (454)
T ss_dssp             EEEEECCHHH-------------HHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---
T ss_pred             EEEEEeChHh-------------CCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhh
Confidence            3444443331             122234455666666555577778888999999999999998776543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.71  E-value=1.8e-16  Score=146.09  Aligned_cols=145  Identities=23%  Similarity=0.351  Sum_probs=108.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH-HHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES-LVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~   79 (263)
                      +++|+|+||||||+||+++++.|+++ |++|++++|+....     +.+  ....++.++.+|++|.++ ++++++++|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~-----~~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~  385 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-----SRF--LNHPHFHFVEGDISIHSEWIEYHVKKCDV  385 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT-----GGG--TTCTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh-----hhh--ccCCceEEEECCCCCcHHHHHHhhcCCCE
Confidence            46789999999999999999999998 89999999985321     111  113568899999999765 7888899999


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcceee-ecc---ccCCC----Ccccc-------CCCCchH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSE---FGNDV----DRVHA-------VEPAKSA  129 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~---~g~~~----~~~~~-------~~~~~~~  129 (263)
                      |||+|+...               +..+.++++++.+.+  +++| +|+   |+...    ++..+       ..|.+.|
T Consensus       386 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y  463 (660)
T 1z7e_A          386 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY  463 (660)
T ss_dssp             EEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHH
T ss_pred             EEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCc
Confidence            999998754               234678999998887  5665 455   33211    22221       1345679


Q ss_pred             HHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          130 FATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       130 ~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      +.+|.++|.+++    +.++++++.|..+.
T Consensus       464 ~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v  493 (660)
T 1z7e_A          464 SVSKQLLDRVIWAYGEKEGLQFTLFRPFNW  493 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECCCcc
Confidence            999999999884    45899999887764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.71  E-value=3.5e-17  Score=128.86  Aligned_cols=115  Identities=23%  Similarity=0.275  Sum_probs=81.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC---cCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ---VDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~v   80 (263)
                      +|+++||||+|+||+++++.|+ +|++|++++|+..                   .+.+|++|++++++++++   +|+|
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~v   62 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAI   62 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence            3589999999999999999999 9999999999831                   367999999999988875   8999


Q ss_pred             EEcCCCcc-------------------chhHHHHHHHHHHhC-Ccceee-eccccCCCCccccCCCCchHHHHHHHHHHH
Q 044721           81 ISTVGHTL-------------------LGDQVKIIAAIKEAG-NIKRFF-PSEFGNDVDRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        81 v~~a~~~~-------------------~~~~~~l~~~~~~~~-~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      |||||...                   +..+.++++++...- .-++++ +|+.....    +..+...|..+|.+++.+
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED----PIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----CCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----CCCccHHHHHHHHHHHHH
Confidence            99999642                   122345555554441 013455 35432211    122356788899988886


Q ss_pred             HHH
Q 044721          140 VEA  142 (263)
Q Consensus       140 ~~~  142 (263)
                      ++.
T Consensus       139 ~~~  141 (202)
T 3d7l_A          139 AKS  141 (202)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.70  E-value=3.2e-18  Score=139.80  Aligned_cols=77  Identities=18%  Similarity=0.102  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHH----HHHhcCc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESL----VKAIKQV   77 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~----~~~~~~~   77 (263)
                      ||+++||||+|+||+++++.|+++|++|++++|+.     ++.+.+..+.  +.++..+  |..+.+.+    .+.+.++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESF-----KQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG-----GSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999984     3222221121  2334333  55554332    2223489


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |+||||||..
T Consensus        74 D~lv~nAg~~   83 (254)
T 1zmt_A           74 DVLVSNDIFA   83 (254)
T ss_dssp             CEEEEECCCC
T ss_pred             CEEEECCCcC
Confidence            9999999976

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.70  E-value=1.4e-16  Score=136.29  Aligned_cols=142  Identities=15%  Similarity=0.116  Sum_probs=105.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-----CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-----HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--   76 (263)
                      +|+|+||||||+||+++++.|+++|     ++|++++|+.....         ....+++++.+|++|++++.+++++  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcCC
Confidence            4789999999999999999999999     99999999854321         1135688999999999999999998  


Q ss_pred             -cCEEEEcCCCcc----------chhHHHHHHHHHHh--CCcceee--------ecc---ccCC------CCccccCCC-
Q 044721           77 -VDVVISTVGHTL----------LGDQVKIIAAIKEA--GNIKRFF--------PSE---FGND------VDRVHAVEP-  125 (263)
Q Consensus        77 -~d~vv~~a~~~~----------~~~~~~l~~~~~~~--~~~~~~i--------~S~---~g~~------~~~~~~~~~-  125 (263)
                       +|+|||+|+...          +..+.++++++.+.  + +++++        .|+   ||..      .++..+..+ 
T Consensus        72 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~  150 (364)
T 2v6g_A           72 DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKY  150 (364)
T ss_dssp             TCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSS
T ss_pred             CCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccccCCcc
Confidence             999999999753          34578999999987  7 88885        344   4332      123333333 


Q ss_pred             CchHHHHHHHHHHHHHHcC-CCEEEEeccCc
Q 044721          126 AKSAFATKAKIRRAVEAEG-IPYTYGDVLNH  155 (263)
Q Consensus       126 ~~~~~~~k~~~e~~~~~~~-~~~~~gr~~n~  155 (263)
                      .+.|+.+...+..+.++.+ +++++.|..++
T Consensus       151 ~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v  181 (364)
T 2v6g_A          151 MNFYYDLEDIMLEEVEKKEGLTWSVHRPGNI  181 (364)
T ss_dssp             CCHHHHHHHHHHHHHTTSTTCEEEEEEESSE
T ss_pred             chhhHHHHHHHHHHhhcCCCceEEEECCCce
Confidence            5567555444444444456 99998886654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.70  E-value=6e-18  Score=153.74  Aligned_cols=173  Identities=18%  Similarity=0.098  Sum_probs=117.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCC----CCcchhh-hhhhhccCCcEEEEccCCCHHHHHHH----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKA----   73 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~----   73 (263)
                      ++|+++||||+++||+++++.|+++|++|++.+|+...    ...++.+ ..+++...+.. ..+|++|.++++++    
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHHHH
Confidence            46899999999999999999999999999998876410    0012222 22222222222 23566665443333    


Q ss_pred             ---hcCcCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           74 ---IKQVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        74 ---~~~~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                         +.++|+||||||.....    ....-++...+-                     |....+..+|..+..+.++.+  
T Consensus        86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~a~~p~m~~~~~--  142 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDV---------------------HLNGAFAVTKAAWPYFQKQKY--  142 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC--
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHHHcCC--
Confidence               34799999999975311    111222222222                     224567778888888776653  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                         |+++|++|...             ..+..+...|.++|.+...+++.++.|+++++||||+|+||.
T Consensus       143 ---G~IVnisS~ag-------------~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~  195 (604)
T 2et6_A          143 ---GRIVNTSSPAG-------------LYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA  195 (604)
T ss_dssp             ---EEEEEECCHHH-------------HHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             ---CEEEEECCHHH-------------cCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC
Confidence               89999888773             233345678999999999999999999999999999999984

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.70  E-value=2.7e-16  Score=129.23  Aligned_cols=131  Identities=15%  Similarity=0.004  Sum_probs=103.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC--cCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vv~   82 (263)
                      |+|+||||+|+||+++++.|+ +|++|++++|+...         .    .+   +.+|++|++++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~---------~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI---------Q----GG---YKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC---------T----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC---------C----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence            479999999999999999999 48999999998421         0    12   78999999999999985  999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceee-eccccC---C---CCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSEFGN---D---VDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~---~---~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +||...               +..+.++++++.+.+ + +++ +|+...   .   .++..+..|.+.|..+|.++|.++
T Consensus        64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  141 (273)
T 2ggs_A           64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFA  141 (273)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999764               234678999999888 7 555 455332   1   234445566788999999999999


Q ss_pred             HHcCCCEEEEeccCch
Q 044721          141 EAEGIPYTYGDVLNHG  156 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~  156 (263)
                      +.  +++++.|+.+..
T Consensus       142 ~~--~~~~~iR~~~v~  155 (273)
T 2ggs_A          142 LQ--DDSLIIRTSGIF  155 (273)
T ss_dssp             CC--TTCEEEEECCCB
T ss_pred             hC--CCeEEEeccccc
Confidence            87  888888876643

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.69  E-value=7.5e-18  Score=136.79  Aligned_cols=171  Identities=19%  Similarity=0.166  Sum_probs=94.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHH---HH---hc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLV---KA---IK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~---~~   75 (263)
                      +++|+++||||+|+||+++++.|++ |+.|++++|+     +++.+.+..  ..++..+.+|+++.++.+   +.   +.
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN-----PEHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLD   74 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcC
Confidence            4678999999999999999999988 8999999998     444443332  246888999998875422   11   23


Q ss_pred             CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEe
Q 044721           76 QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGD  151 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr  151 (263)
                      ++|++|||||......    ...-++...+.+                     ....+..++...+.+.+..      |+
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N---------------------~~~~~~l~~~~~~~~~~~~------g~  127 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLN---------------------VIVPAELSRQLLPALRAAS------GC  127 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHT------CE
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHhhcC------Ce
Confidence            7999999999764211    000011111111                     0222333444444332221      33


Q ss_pred             ccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          152 VLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       152 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++++++..             +..+......|..+|.+...+++.++.+++..++++|+|+||...++.
T Consensus       128 iv~isS~~-------------~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  183 (245)
T 3e9n_A          128 VIYINSGA-------------GNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM  183 (245)
T ss_dssp             EEEEC-----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             EEEEcCcc-------------cccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence            33333332             111223334555555555557777788899999999999999776543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.68  E-value=1.2e-17  Score=151.81  Aligned_cols=170  Identities=14%  Similarity=0.048  Sum_probs=119.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccC-CCHHHH-H---HHhcCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV-LNHESL-V---KAIKQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~-~---~~~~~~   77 (263)
                      ++|+++||||+++||+++++.|+++|++|++.+|+..   .+..+.+... +.++..+.+|+ .+.+.+ +   +.+.++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~---~~~~~~i~~~-g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA---TKTVDEIKAA-GGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH---HHHHHHHHhc-CCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999886421   1111222221 23456677788 554432 2   234589


Q ss_pred             CEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           78 DVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        78 d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                      |++|||||......    ...-++...+.                     |....+..+|..+..+.++.+     |+++
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~~~-----G~IV  450 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQV---------------------HLIGTFNLSRLAWPYFVEKQF-----GRII  450 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHTTC-----EEEE
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHHHHHcCC-----CEEE
Confidence            99999999753111    11122222222                     224567778888877766543     8999


Q ss_pred             CchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          154 NHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       154 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                      |++|...             ..+..+...|.++|++...+++.++.|+++++|+||+|+||.
T Consensus       451 nisS~ag-------------~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          451 NITSTSG-------------IYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             EECCHHH-------------HSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             EECChhh-------------ccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence            9888773             333446678999999999999999999999999999999995

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.68  E-value=2.3e-17  Score=139.03  Aligned_cols=175  Identities=16%  Similarity=0.119  Sum_probs=103.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCC----CCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHh--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAI--   74 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~--   74 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|....    ...++.+ ..+.+..... ...+|+++.+++++++  
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHH
Confidence            357899999999999999999999999999998664210    0022222 2222322222 2358999988766654  


Q ss_pred             -----cCcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           75 -----KQVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        75 -----~~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                           .++|+||||||......    ...-++...+.+                     ....+..++.....+.++.  
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~~~~m~~~~--  142 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH---------------------LRGSFQVTRAAWDHMKKQN--  142 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH---------------------hHHHHHHHHHHHHHHHHcC--
Confidence                 37999999999653110    001111111111                     0222333444444433332  


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCc
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKS  216 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~  216 (263)
                         .++++|++|......             ..+...|..+|.+...+++.++.++++.+|++|+|.||..
T Consensus       143 ---~grIV~vsS~~~~~~-------------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          143 ---YGRIIMTASASGIYG-------------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             ---CEEEEEECCHHHHHC-------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             ---CCEEEEECChhhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence               255555544432211             1133456666666555777788889999999999999975

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.67  E-value=2.2e-17  Score=142.94  Aligned_cols=85  Identities=20%  Similarity=0.188  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCChhHHH--HHHHHHHCCCCEEEEEcCCCCCCc----------chhhhhhhhccCCcEEEEccCCCHHHH
Q 044721            3 SKSKILFIGGTGYIGKF--IVEASVKAGHPTFVLVRESTLSAP----------SKSQLLDHFKKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~~D~~~~~~~   70 (263)
                      .+|+++||||+++||++  +++.|+++|++|++++|+......          +..+......+..+..+.+|++|++++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            46899999999999999  999999999999999998644211          111111111244678899999999988


Q ss_pred             HHHhc-------CcCEEEEcCCCc
Q 044721           71 VKAIK-------QVDVVISTVGHT   87 (263)
Q Consensus        71 ~~~~~-------~~d~vv~~a~~~   87 (263)
                      +++++       ++|++|||||..
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHcCCCCEEEECCccc
Confidence            87765       689999999974

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.67  E-value=1.2e-17  Score=152.32  Aligned_cols=174  Identities=16%  Similarity=0.091  Sum_probs=110.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCC----CCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+|+||+++++.|+++|++|++++|+...    ...++.+ ..+.+...... ..+|++|.++++++++ 
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~   95 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIET   95 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHH
Confidence            467899999999999999999999999999999883210    0022222 22223222222 3479999988887776 


Q ss_pred             ------CcCEEEEcCCCccch----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            ++|+||||||.....    ....-++...+.+                     ....+..+|.....+.++.  
T Consensus        96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vN---------------------l~g~~~l~~~~~p~m~~~~--  152 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH---------------------LKGSFKCTQAAFPYMKKQN--  152 (613)
T ss_dssp             ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHTTT--
T ss_pred             HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHcC--
Confidence                  689999999976411    1111122222211                     1334555666666554443  


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                         .|+++|++|....             .+..+...|.++|.+...+++.++.+++..+|+||+|+||.
T Consensus       153 ---~g~IV~isS~a~~-------------~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~  206 (613)
T 3oml_A          153 ---YGRIIMTSSNSGI-------------YGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTA  206 (613)
T ss_dssp             ---CEEEEEECCHHHH-------------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-
T ss_pred             ---CCEEEEECCHHHc-------------CCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCC
Confidence               3778777776632             23345667888888888899999999999999999999995

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.66  E-value=2.8e-17  Score=133.40  Aligned_cols=75  Identities=16%  Similarity=0.117  Sum_probs=51.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEE-E--cCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHH-HHH---hc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVL-V--RESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESL-VKA---IK   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~-~~~---~~   75 (263)
                      +|+++||||+|+||+++++.|+++|++|+++ +  |+     +++.+.+ +.+  .+..+.  |..+.+.+ +++   +.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~-----~~~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFAD-----AAERQRFESEN--PGTIAL--AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS-----HHHHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCC-----HHHHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999 5  88     4343322 222  122222  44443332 222   33


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|+||||||..
T Consensus        72 ~iD~lv~~Ag~~   83 (244)
T 1zmo_A           72 AIDTIVSNDYIP   83 (244)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            799999999964

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.64  E-value=8.9e-16  Score=131.85  Aligned_cols=115  Identities=15%  Similarity=0.167  Sum_probs=94.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |+||||||||+||+++++.|+++|+ +|++++|+                           .|++++.++++++|+|||+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~   53 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL   53 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence            5899999999999999999999998 77665543                           5788889999999999999


Q ss_pred             CCCcc-----------chhHHHHHHHHHHhCCcc-eeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHH----cCCC
Q 044721           84 VGHTL-----------LGDQVKIIAAIKEAGNIK-RFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA----EGIP  146 (263)
Q Consensus        84 a~~~~-----------~~~~~~l~~~~~~~~~~~-~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~----~~~~  146 (263)
                      |+...           +..+.++++++.+.+ ++ ++++ |+.+...        .+.|+.+|..+|+++++    .+++
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~--------~~~Y~~sK~~~E~~~~~~~~~~g~~  124 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ--------DNPYGESKLQGEQLLREYAEEYGNT  124 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS--------CSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC--------CCCchHHHHHHHHHHHHHHHHhCCC
Confidence            98753           456789999999998 87 7775 6544322        56899999999999976    7999


Q ss_pred             EEEEeccCc
Q 044721          147 YTYGDVLNH  155 (263)
Q Consensus       147 ~~~gr~~n~  155 (263)
                      +++.|..+.
T Consensus       125 ~~i~R~~~v  133 (369)
T 3st7_A          125 VYIYRWPNL  133 (369)
T ss_dssp             EEEEEECEE
T ss_pred             EEEEECCce
Confidence            999886654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.64  E-value=7.7e-18  Score=142.63  Aligned_cols=179  Identities=8%  Similarity=0.017  Sum_probs=100.2

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCC---------CCCCcchhhhhh-hhccCCcEEEEccCCCH--H
Q 044721            3 SKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRES---------TLSAPSKSQLLD-HFKKLGVNLVIGDVLNH--E   68 (263)
Q Consensus         3 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~--~   68 (263)
                      ++|+++||||++  +||+++++.|+++|++|++.+|++         ............ ......+..+.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            368999999875  999999999999999999777652         110000000000 00112356788888776  5


Q ss_pred             ------------------HHHHHhc-------CcCEEEEcCCCcc-----c-hhHHHHHHHHHHhCCcceeeeccccCCC
Q 044721           69 ------------------SLVKAIK-------QVDVVISTVGHTL-----L-GDQVKIIAAIKEAGNIKRFFPSEFGNDV  117 (263)
Q Consensus        69 ------------------~~~~~~~-------~~d~vv~~a~~~~-----~-~~~~~l~~~~~~~~~~~~~i~S~~g~~~  117 (263)
                                        +++++++       ++|++|||||...     . .....-++...+.+              
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN--------------  146 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKS--------------  146 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH--------------
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHH--------------
Confidence                              6666554       6899999999631     0 00011111111111              


Q ss_pred             CccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhH-HHHHHHHHhcCCceee
Q 044721          118 DRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQ-VKIIAAIKEAGNVKRF  196 (263)
Q Consensus       118 ~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  196 (263)
                             ....+..++..+..+.+       -|+++|++|..             +..+.... ..|..+|.+...+++.
T Consensus       147 -------~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~-------------~~~~~~~~~~~Y~asKaal~~~~~~  199 (329)
T 3lt0_A          147 -------SYSLISLCKYFVNIMKP-------QSSIISLTYHA-------------SQKVVPGYGGGMSSAKAALESDTRV  199 (329)
T ss_dssp             -------THHHHHHHHHHGGGEEE-------EEEEEEEECGG-------------GTSCCTTCTTTHHHHHHHHHHHHHH
T ss_pred             -------hHHHHHHHHHHHHHHhh-------CCeEEEEeCcc-------------ccCCCCcchHHHHHHHHHHHHHHHH
Confidence                   01222223332222111       04444443333             11222222 1455555555557778


Q ss_pred             ccCCCCC-CccccccCCCCCcchhcHH
Q 044721          197 FPSEFGN-DVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       197 ~~~~~~~-~~~~vn~v~pg~~~~~~~~  222 (263)
                      ++.++++ .+|+||+|+||+..++...
T Consensus       200 la~el~~~~gI~vn~v~PG~v~T~~~~  226 (329)
T 3lt0_A          200 LAYHLGRNYNIRINTISAGPLKSRAAT  226 (329)
T ss_dssp             HHHHHHHHHCCEEEEEEECCCCCHHHH
T ss_pred             HHHHhCCccCeEEEEEecceeechhHh
Confidence            8888988 8999999999988776543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.60  E-value=3.5e-15  Score=133.72  Aligned_cols=133  Identities=14%  Similarity=0.158  Sum_probs=97.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+||||||||+||+++++.|+++|++|++++|+....                ..+.+|+.+.  +.++++++|+|||+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih~  208 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDGADVLVHL  208 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCCCCEEEEC
Confidence            68999999999999999999999999999999985321                1256777653  35677899999999


Q ss_pred             CCCcc----------------chhHHHHHHH-HHHhCCcceeee-cc---cc-CC----CCccccCCCCchHHHHHHHHH
Q 044721           84 VGHTL----------------LGDQVKIIAA-IKEAGNIKRFFP-SE---FG-ND----VDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        84 a~~~~----------------~~~~~~l~~~-~~~~~~~~~~i~-S~---~g-~~----~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      |+...                +..+.+++++ +...+ ++++|+ |+   |+ ..    .++..+. +.+.|..+|...|
T Consensus       209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E  286 (516)
T 3oh8_A          209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWE  286 (516)
T ss_dssp             CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHH
T ss_pred             CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHH
Confidence            99752                3347889998 55556 888884 54   44 11    1233333 5667777888777


Q ss_pred             HHH---HHcCCCEEEEeccCch
Q 044721          138 RAV---EAEGIPYTYGDVLNHG  156 (263)
Q Consensus       138 ~~~---~~~~~~~~~gr~~n~~  156 (263)
                      .++   +..++++++.|..++.
T Consensus       287 ~~~~~~~~~gi~~~ilRp~~v~  308 (516)
T 3oh8_A          287 HATAPASDAGKRVAFIRTGVAL  308 (516)
T ss_dssp             HTTHHHHHTTCEEEEEEECEEE
T ss_pred             HHHHHHHhCCCCEEEEEeeEEE
Confidence            654   4679999999877653

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.57  E-value=1.2e-14  Score=129.44  Aligned_cols=141  Identities=19%  Similarity=0.264  Sum_probs=97.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcC--c
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQ--V   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--~   77 (263)
                      .+++++||||+|+||+++++.|+++|+ +|++++|+.... +...+..+.+.  +.++.++.+|++|.+++++++++  +
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA-PGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            468999999999999999999999999 488889985321 11112222232  34578899999999999999975  9


Q ss_pred             CEEEEcCCCcc-------------------chhHHHHHHHHHHh-CCcceee-eccccCCCCccccCCCCchHHHHHHHH
Q 044721           78 DVVISTVGHTL-------------------LGDQVKIIAAIKEA-GNIKRFF-PSEFGNDVDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        78 d~vv~~a~~~~-------------------~~~~~~l~~~~~~~-~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~~~  136 (263)
                      |+||||||...                   +....++.+.+... + .++|| +||.......    .....|..+|..+
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~----~g~~~YaaaKa~l  411 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGN----AGQGAYAAANAAL  411 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCC----TTBHHHHHHHHHH
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCC----CCCHHHHHHHHHH
Confidence            99999999764                   12234556655544 5 67776 4664322211    1256799999999


Q ss_pred             HHHHH---HcCCCEEE
Q 044721          137 RRAVE---AEGIPYTY  149 (263)
Q Consensus       137 e~~~~---~~~~~~~~  149 (263)
                      +.+.+   ..|++++.
T Consensus       412 d~la~~~~~~gi~v~s  427 (511)
T 2z5l_A          412 DALAERRRAAGLPATS  427 (511)
T ss_dssp             HHHHHHHHTTTCCCEE
T ss_pred             HHHHHHHHHcCCcEEE
Confidence            98875   34666553

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.56  E-value=5.6e-17  Score=136.74  Aligned_cols=35  Identities=17%  Similarity=0.063  Sum_probs=32.1

Q ss_pred             CCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|+++||||  +++||+++++.|+++|++|++++|+
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            3578999999  8999999999999999999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.56  E-value=1.4e-14  Score=128.59  Aligned_cols=143  Identities=17%  Similarity=0.240  Sum_probs=101.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcC---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQ---   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---   76 (263)
                      .+++++||||+|+||+++++.|+++|++ |++++|+.... +...+..+.+.  +.++.++.+|++|.+++.++++.   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            4689999999999999999999999996 99999985321 11111222222  34678899999999999998875   


Q ss_pred             ---cCEEEEcCCCcc-------------------chhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHH
Q 044721           77 ---VDVVISTVGHTL-------------------LGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        77 ---~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k  133 (263)
                         +|+||||||...                   +.++.++.+.+...+ .++|| +||.......    .....|..+|
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~----~g~~~Yaaak  378 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA----PGLGGYAPGN  378 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC----TTCTTTHHHH
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCC----CCCHHHHHHH
Confidence               499999999753                   233567778777777 78887 4653221111    1146799999


Q ss_pred             HHHHHHHH---HcCCCEEEEe
Q 044721          134 AKIRRAVE---AEGIPYTYGD  151 (263)
Q Consensus       134 ~~~e~~~~---~~~~~~~~gr  151 (263)
                      ..++.+.+   ..|++++..+
T Consensus       379 a~l~~la~~~~~~gi~v~~i~  399 (486)
T 2fr1_A          379 AYLDGLAQQRRSDGLPATAVA  399 (486)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEE
T ss_pred             HHHHHHHHHHHhcCCeEEEEE
Confidence            99887764   4577666444

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.55  E-value=1.9e-14  Score=127.52  Aligned_cols=132  Identities=17%  Similarity=0.213  Sum_probs=93.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      ++++|||||+|+||+++++.|+++|+ +|++++|+.... +...+..+.+.  +.++.++.+|++|.+++.++++     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADA-PGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCCh-HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            47999999999999999999999998 688888874321 11122222222  4468889999999999999886     


Q ss_pred             -CcCEEEEcCCCc-c-------------------chhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHH
Q 044721           76 -QVDVVISTVGHT-L-------------------LGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATK  133 (263)
Q Consensus        76 -~~d~vv~~a~~~-~-------------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k  133 (263)
                       ++|+||||||.. .                   +....++.+.+...+ .++|| +||......    ......|..+|
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g----~~g~~~YaAaK  392 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWG----SGGQPGYAAAN  392 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTT----CTTCHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCC----CCCcHHHHHHH
Confidence             489999999976 2                   233467777777766 77777 455321111    11146788899


Q ss_pred             HHHHHHHH
Q 044721          134 AKIRRAVE  141 (263)
Q Consensus       134 ~~~e~~~~  141 (263)
                      ..++.+.+
T Consensus       393 a~ldala~  400 (496)
T 3mje_A          393 AYLDALAE  400 (496)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            98887764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.55  E-value=6.1e-14  Score=116.83  Aligned_cols=129  Identities=16%  Similarity=0.168  Sum_probs=87.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|||||||||||++++++|+++||+|++++|++..     .            .+..|    +...+.++++|++||+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----~------------~~~~~----~~~~~~l~~~d~vihla   59 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----G------------RITWD----ELAASGLPSCDAAVNLA   59 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----T------------EEEHH----HHHHHCCCSCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----C------------eeecc----hhhHhhccCCCEEEEec
Confidence            689999999999999999999999999999998421     1            11222    22345678999999999


Q ss_pred             CCcc-------------------chhHHHHHHHHHHhCCcce--eee-cc---ccCCC----CccccCCCCchHHHHHHH
Q 044721           85 GHTL-------------------LGDQVKIIAAIKEAGNIKR--FFP-SE---FGNDV----DRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        85 ~~~~-------------------~~~~~~l~~~~~~~~~~~~--~i~-S~---~g~~~----~~~~~~~~~~~~~~~k~~  135 (263)
                      +...                   +..+.++++++...+ .+.  +++ |+   |+...    +++.+..+...|...+..
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~  138 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTK  138 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHH
Confidence            7531                   234577888888877 554  443 33   44332    444555555556666665


Q ss_pred             HHHHH--HHcCCCEEEEeccCc
Q 044721          136 IRRAV--EAEGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~--~~~~~~~~~gr~~n~  155 (263)
                      .|...  ...++++++.|..+.
T Consensus       139 ~e~~~~~~~~~~~~~~~r~~~v  160 (298)
T 4b4o_A          139 WEAAARLPGDSTRQVVVRSGVV  160 (298)
T ss_dssp             HHHHHCCSSSSSEEEEEEECEE
T ss_pred             HHHHHHhhccCCceeeeeeeeE
Confidence            55543  355777887776553

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.54  E-value=7.2e-16  Score=129.73  Aligned_cols=35  Identities=14%  Similarity=0.021  Sum_probs=32.4

Q ss_pred             CCCeEEEEcC--CChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGG--TGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|+++||||  +|+||+++++.|+++|++|++++|+
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            4689999999  8999999999999999999999875

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.53  E-value=8.9e-14  Score=124.40  Aligned_cols=86  Identities=9%  Similarity=0.116  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEE-EcCCCCC---------Ccchhhhhhhhc--cCCcEEEEccCCCHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVL-VRESTLS---------APSKSQLLDHFK--KLGVNLVIGDVLNHES   69 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~~---------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   69 (263)
                      +++++|||||+|+||.++++.|+++|++ |+++ +|+....         .+...+..+.+.  +.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4679999999999999999999999998 6666 7774220         011112222221  4568899999999999


Q ss_pred             HHHHhc------CcCEEEEcCCCcc
Q 044721           70 LVKAIK------QVDVVISTVGHTL   88 (263)
Q Consensus        70 ~~~~~~------~~d~vv~~a~~~~   88 (263)
                      ++++++      .+|+||||||...
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~  354 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVD  354 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCC
Confidence            999886      4799999999764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.52  E-value=1.3e-14  Score=121.04  Aligned_cols=36  Identities=14%  Similarity=0.082  Sum_probs=33.0

Q ss_pred             CCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            2 ASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         2 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            457899999999  999999999999999999999864

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.51  E-value=2.3e-14  Score=137.43  Aligned_cols=174  Identities=13%  Similarity=0.075  Sum_probs=107.5

Q ss_pred             CCCCeEEEEcCCCh-hHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGY-IGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+|+ ||+++++.|+++|++|++++ |+.... .+..+.+ +.+.  +.++.++.+|++|.++++++++ 
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~l-ee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV-TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTT-TTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHH-HHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            35689999999998 99999999999999999984 553322 1111111 1111  2357889999999998887753 


Q ss_pred             ------------CcCEEEEcCCCccch-h----H--HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHH
Q 044721           76 ------------QVDVVISTVGHTLLG-D----Q--VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        76 ------------~~d~vv~~a~~~~~~-~----~--~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~  136 (263)
                                  ++|+||||||..... .    .  ..-++.+.+.                     |....+...+...
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~V---------------------NL~G~~~Ltqaa~  611 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLT---------------------NILRMMGCVKKQK  611 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTH---------------------HHHHHHHHHHHHH
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHH---------------------HHHHHHHHHHHHH
Confidence                        589999999975321 0    0  0111111100                     1011222233221


Q ss_pred             -HHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCc-eeeccCCCCCCccccccCCCC
Q 044721          137 -RRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNV-KRFFPSEFGNDVDRVNAVEPA  214 (263)
Q Consensus       137 -e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vn~v~pg  214 (263)
                       ...+++.+    .|+++|++|....             .+  +...|.++|++...+ ++.++.+++.. |+||+|+||
T Consensus       612 ~lp~M~krg----gGrIVnISSiAG~-------------~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG  671 (1688)
T 2pff_A          612 SARGIETRP----AQVILPMSPNHGT-------------FG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIG  671 (1688)
T ss_dssp             HHHTCTTSC----EEECCCCCSCTTT-------------SS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCC
T ss_pred             hChHHHhCC----CCEEEEEEChHhc-------------cC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEEC
Confidence             11112222    3667776664421             11  334677778777776 78888999988 999999999


Q ss_pred             Ccc
Q 044721          215 KSA  217 (263)
Q Consensus       215 ~~~  217 (263)
                      +..
T Consensus       672 ~V~  674 (1688)
T 2pff_A          672 WTR  674 (1688)
T ss_dssp             CCC
T ss_pred             cCc
Confidence            876

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.45  E-value=3.2e-14  Score=140.19  Aligned_cols=170  Identities=12%  Similarity=0.076  Sum_probs=105.1

Q ss_pred             CCCCeEEEEcCCCh-hHHHHHHHHHHCCCCEEEEE-cCCCCCCcchhh-hh----hhhc--cCCcEEEEccCCCHHHHHH
Q 044721            2 ASKSKILFIGGTGY-IGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQ-LL----DHFK--KLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         2 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~-~~----~~~~--~~~~~~~~~D~~~~~~~~~   72 (263)
                      +++|+++||||+++ ||+++++.|+++|++|++++ |+     .++.+ ..    ..+.  +.++.++.+|++|.+++++
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~-----~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~a  747 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRF-----SKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  747 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSC-----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHH
Confidence            35789999999998 99999999999999999985 55     22221 11    1111  3457889999999999887


Q ss_pred             Hhc-------------CcCEEEEcCCCccch-h----H--HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHH
Q 044721           73 AIK-------------QVDVVISTVGHTLLG-D----Q--VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFAT  132 (263)
Q Consensus        73 ~~~-------------~~d~vv~~a~~~~~~-~----~--~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~  132 (263)
                      +++             ++|+||||||..... .    .  ..-++.+...+                     ....+...
T Consensus       748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vN---------------------v~g~~~l~  806 (1887)
T 2uv8_A          748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTN---------------------ILRMMGCV  806 (1887)
T ss_dssp             HHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHH---------------------HHHHHHHH
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHH---------------------HHHHHHHH
Confidence            763             589999999975321 1    0  11111111111                     01112222


Q ss_pred             HHHH-HHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCc-eeeccCCCCCCcccccc
Q 044721          133 KAKI-RRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNV-KRFFPSEFGNDVDRVNA  210 (263)
Q Consensus       133 k~~~-e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vn~  210 (263)
                      +... ...+++.+    .|+++|+++...             ..+  +...|..+|.+...+ ++.++.+|++. |+||+
T Consensus       807 ~a~~~lp~m~~~~----~G~IVnISS~ag-------------~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNa  866 (1887)
T 2uv8_A          807 KKQKSARGIETRP----AQVILPMSPNHG-------------TFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCG  866 (1887)
T ss_dssp             HHHHHTTTCCSCC----EEEEEEECSCTT-------------CSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEE
T ss_pred             HHHHhhhhhhhCC----CCEEEEEcChHh-------------ccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEE
Confidence            2210 00011111    245555444331             111  334677777777777 88899999988 99999


Q ss_pred             CCCCCcc
Q 044721          211 VEPAKSA  217 (263)
Q Consensus       211 v~pg~~~  217 (263)
                      |+||+..
T Consensus       867 V~PG~V~  873 (1887)
T 2uv8_A          867 AIIGWTR  873 (1887)
T ss_dssp             EEECCEE
T ss_pred             EEecccc
Confidence            9999876

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.45  E-value=1.2e-12  Score=93.48  Aligned_cols=95  Identities=25%  Similarity=0.263  Sum_probs=80.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++++|+|+|+ |++|+++++.|.+.| ++|++++|+     +++.+.+.   ..++..+.+|+.+.+++.++++++|+||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~-----~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHD-----LAALAVLN---RMGVATKQVDAKDEAGLAKALGGFDAVI   74 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESC-----HHHHHHHH---TTTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHH---hCCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence            4579999999 999999999999999 899999998     54443222   4567889999999999999999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++++..   ...++++.+.+.+ ++++.+
T Consensus        75 ~~~~~~---~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           75 SAAPFF---LTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             ECSCGG---GHHHHHHHHHHTT-CEEECC
T ss_pred             ECCCch---hhHHHHHHHHHhC-CCEEEe
Confidence            999754   4578899999999 887755

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.41  E-value=1.1e-13  Score=129.55  Aligned_cols=166  Identities=16%  Similarity=0.146  Sum_probs=105.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-HCCCC-EEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASV-KAGHP-TFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++++++||||+|+||+++++.|+ ++|++ |++++|+.... +...+.++++.  +.++.++.+|++|.++++++++   
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA-SGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccch-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            46899999999999999999999 79985 88889984321 11222233332  4457889999999999999886   


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         .+|+||||||......    +..-++.+.+.                     |....+...+....      .+   
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~---------------------nv~G~~~l~~~~~~------~l---  657 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRP---------------------KVDGARNLLELIDP------DV---  657 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCC---------------------CCCHHHHHHHHSCT------TS---
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHH---------------------HHHHHHHHHHHHhh------CC---
Confidence               4799999999864111    11111111111                     11222222322110      11   


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcch
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAF  218 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~  218 (263)
                        +++|++|..             +..+..++..|.+++.    +.+.++.++...++++|+|+||+...
T Consensus       658 --~iV~~SS~a-------------g~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t  708 (795)
T 3slk_A          658 --ALVLFSSVS-------------GVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAE  708 (795)
T ss_dssp             --EEEEEEETH-------------HHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSC
T ss_pred             --EEEEEccHH-------------hcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECc
Confidence              344444444             2234455667776663    66677777888999999999997654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.39  E-value=2.8e-13  Score=133.37  Aligned_cols=83  Identities=11%  Similarity=0.111  Sum_probs=63.5

Q ss_pred             CCCCeEEEEcCCCh-hHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-h---h-hhhc--cCCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGY-IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-L---L-DHFK--KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~---~-~~~~--~~~~~~~~~D~~~~~~~~~~   73 (263)
                      ++++++|||||+|+ ||+++++.|+++|++|++++++.    ..+.+ .   + ..+.  +.++.++.+|++|.++++++
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~----~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF----SRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC----hHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            35789999999999 99999999999999999986442    22211 1   1 2221  34578899999999998887


Q ss_pred             hc-----------CcCEEEEcCCCcc
Q 044721           74 IK-----------QVDVVISTVGHTL   88 (263)
Q Consensus        74 ~~-----------~~d~vv~~a~~~~   88 (263)
                      ++           ++|+||||||...
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~  751 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPE  751 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCC
T ss_pred             HHHHHHhhcccCCCCcEEEeCccccc
Confidence            63           5899999999753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.37  E-value=1.6e-13  Score=115.96  Aligned_cols=150  Identities=11%  Similarity=0.053  Sum_probs=96.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~   72 (263)
                      |.++|+|+||||+||||++++..|+++|+       +|+++++.+.   ..+.+ ....+....+.++ .|+.+.+++.+
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~---~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLL-AGLEATDDPKV   76 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTE-EEEEEESCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc---hhhccchhhhhhccccccc-CCeEeccChHH
Confidence            56678999999999999999999999986       7988887621   01111 1112212222223 57777677788


Q ss_pred             HhcCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcc-eee-ecccc---CC-CCccc-cCCCCchHHHH
Q 044721           73 AIKQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIK-RFF-PSEFG---ND-VDRVH-AVEPAKSAFAT  132 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~-~~i-~S~~g---~~-~~~~~-~~~~~~~~~~~  132 (263)
                      +++++|+|||+||...             +..++++++++.+.+..+ +++ +|+-.   .. ..+.. ...|...|+.+
T Consensus        77 a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~t  156 (327)
T 1y7t_A           77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMT  156 (327)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECC
T ss_pred             HhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccc
Confidence            8999999999999764             234688999998873133 444 44311   00 01111 24456678889


Q ss_pred             HHHHHHHH----HHcCCCEEEEeccC
Q 044721          133 KAKIRRAV----EAEGIPYTYGDVLN  154 (263)
Q Consensus       133 k~~~e~~~----~~~~~~~~~gr~~n  154 (263)
                      |...|++.    +..+++.+..|..+
T Consensus       157 kl~~er~~~~~a~~~g~~~~~vr~~~  182 (327)
T 1y7t_A          157 RLDHNRAKAQLAKKTGTGVDRIRRMT  182 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCE
T ss_pred             hHHHHHHHHHHHHHhCcChhheeeeE
Confidence            99888876    34577766555444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.28  E-value=3.1e-12  Score=131.85  Aligned_cols=186  Identities=9%  Similarity=-0.010  Sum_probs=108.2

Q ss_pred             CCCCeEEEEcCCCh-hHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGY-IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+++ ||+++++.|+++|++|++++|+......+..+ ..+.+.  +.++..+.+|++|+++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999 99999999999999999999984310000022 222222  2346788999999999887642  


Q ss_pred             ---------CcCEEEEcCCCcc-chhHHHHHHHHHHhCCcceeeeccccCCCCcc----ccCCCCchHHHHHHHHHHHHH
Q 044721           76 ---------QVDVVISTVGHTL-LGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRV----HAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        76 ---------~~d~vv~~a~~~~-~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~----~~~~~~~~~~~~k~~~e~~~~  141 (263)
                               ++|++|||||... ...             ........--..++..    ...+..+.+..++.....+.+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~-------------~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~ 2280 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFP-------------FAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAE 2280 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEE-------------CCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCc-------------ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                     5899999999721 000             0000000000000000    111223344445555444433


Q ss_pred             HcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCC--CCCCccccccCCCCCcc
Q 044721          142 AEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSE--FGNDVDRVNAVEPAKSA  217 (263)
Q Consensus       142 ~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vn~v~pg~~~  217 (263)
                      . +..-..+.+.+.++               ......+...|.++|++...++|.++.|  |+. +|+||+++||+..
T Consensus      2281 ~-~~g~~~~ii~~~ss---------------~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~ 2341 (3089)
T 3zen_D         2281 R-DIASRLHVVLPGSP---------------NRGMFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTK 2341 (3089)
T ss_dssp             T-TCCCCEEEEEEECS---------------STTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEE
T ss_pred             c-CCCceeEEEEECCc---------------ccccCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccC
Confidence            2 21000111111000               1111123346888998888899999999  775 5999999999765

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.17  E-value=5.4e-11  Score=98.52  Aligned_cols=81  Identities=21%  Similarity=0.256  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +++++++||||+|++|+++++.|++.|++|++++|+     .++.+.+ +.+.. .++.++.+|++|+++++++++++|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~-----~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCE
Confidence            357899999999999999999999999999999998     4443322 22211 2466788999999999999999999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      ||||+|..
T Consensus       192 lVn~ag~g  199 (287)
T 1lu9_A          192 VFTAGAIG  199 (287)
T ss_dssp             EEECCCTT
T ss_pred             EEECCCcc
Confidence            99999854

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.12  E-value=1.1e-09  Score=92.67  Aligned_cols=83  Identities=16%  Similarity=0.177  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-HCCCCEEEEEcCCCCCCcch-----------hhhhhhhccCCcEEEEccCCCHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASV-KAGHPTFVLVRESTLSAPSK-----------SQLLDHFKKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~~~~~~~~D~~~~~~~~   71 (263)
                      +|++||||||++||.+.+..|+ +.|..++++.+.........           .+.++. .+..+..+.+|++++++++
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~-~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR-EGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-HTCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH-cCCCceeEeCCCCCHHHHH
Confidence            6899999999999999999998 68999999988754432110           011122 2456888999999999888


Q ss_pred             HHhc-------CcCEEEEcCCCc
Q 044721           72 KAIK-------QVDVVISTVGHT   87 (263)
Q Consensus        72 ~~~~-------~~d~vv~~a~~~   87 (263)
                      ++++       ++|+|||+++..
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            8775       799999999976

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.06  E-value=3.1e-10  Score=117.01  Aligned_cols=84  Identities=12%  Similarity=0.119  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .+++++||||+|+||+++++.|+++|++ |++++|+.... ....+.++.+.  +.++..+.+|++|.++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRT-GYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCS-HHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcch-HHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999997 77788885432 11112222222  3457788999999998887764    


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        .+|+||||||..
T Consensus      1962 ~g~id~lVnnAgv~ 1975 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVL 1975 (2512)
T ss_dssp             HSCEEEEEECCCC-
T ss_pred             cCCCcEEEECCCcC
Confidence              689999999975

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.04  E-value=2.6e-09  Score=78.69  Aligned_cols=96  Identities=20%  Similarity=0.231  Sum_probs=75.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv   81 (263)
                      ++++++|+|+ |.+|+++++.|.+.|++|++++++     +++.+.+.   ..++.++.+|.++++.++++ ++++|.+|
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~-----~~~~~~~~---~~~~~~~~gd~~~~~~l~~~~~~~~d~vi   75 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKS-----KEKIELLE---DEGFDAVIADPTDESFYRSLDLEGVSAVL   75 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHH---HTTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHH---HCCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence            4678999997 999999999999999999999998     55543322   34678899999999998876 56899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .+.+.  ......+...+++.+ ..+++.
T Consensus        76 ~~~~~--~~~n~~~~~~a~~~~-~~~iia  101 (141)
T 3llv_A           76 ITGSD--DEFNLKILKALRSVS-DVYAIV  101 (141)
T ss_dssp             ECCSC--HHHHHHHHHHHHHHC-CCCEEE
T ss_pred             EecCC--HHHHHHHHHHHHHhC-CceEEE
Confidence            99883  234455667777777 666664

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=99.03  E-value=1.7e-09  Score=94.87  Aligned_cols=79  Identities=19%  Similarity=0.253  Sum_probs=62.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |++++|+|+| +|++|+++++.|++.|++|++++|+     .++.+.+... -.++..+.+|++|.+++.++++++|+||
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~-----~~~a~~la~~-~~~~~~~~~Dv~d~~~l~~~l~~~DvVI   73 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVI   73 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESS-----HHHHHHTTTT-CTTEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECC-----HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHcCCcEEE
Confidence            4578999998 7999999999999999999999998     4444322211 1246778899999999999999999999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      |+++..
T Consensus        74 n~a~~~   79 (450)
T 1ff9_A           74 SLIPYT   79 (450)
T ss_dssp             ECCC--
T ss_pred             ECCccc
Confidence            999864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.00  E-value=1.7e-09  Score=93.73  Aligned_cols=100  Identities=20%  Similarity=0.253  Sum_probs=77.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC---CCEEEEEcCCCCCCcchhhhh-hhhcc---CCcEEEEccCCCHHHHHHHhcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLL-DHFKK---LGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-~~~~~---~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      |++|+|+|| |++|+.+++.|++.|   .+|++.+|+     .++.+.+ +.+..   .++..+.+|++|.+++++++++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~-----~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~   74 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRT-----LSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE   74 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESC-----HHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECC-----HHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence            368999998 999999999999998   389999998     5554432 22322   3588899999999999999987


Q ss_pred             --cCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccc
Q 044721           77 --VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEF  113 (263)
Q Consensus        77 --~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~  113 (263)
                        +|+|||+++...   ...+++++.+.+ +..+-.+.+
T Consensus        75 ~~~DvVin~ag~~~---~~~v~~a~l~~g-~~vvD~a~~  109 (405)
T 4ina_A           75 VKPQIVLNIALPYQ---DLTIMEACLRTG-VPYLDTANY  109 (405)
T ss_dssp             HCCSEEEECSCGGG---HHHHHHHHHHHT-CCEEESSCC
T ss_pred             hCCCEEEECCCccc---ChHHHHHHHHhC-CCEEEecCC
Confidence              999999998652   467889999998 664434443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.99  E-value=5.3e-09  Score=76.95  Aligned_cols=97  Identities=20%  Similarity=0.309  Sum_probs=73.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv   81 (263)
                      ++++++|+|+ |.+|+.+++.|.+.|++|++++|+     +++.+.+.   ......+.+|.++.+.+.++ +.++|++|
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~-----~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~~d~vi   75 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKVNAYA---SYATHAVIANATEENELLSLGIRNFEYVI   75 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHHHTTT---TTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH---HhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence            4678999997 999999999999999999999988     44433222   23456788999998888776 78999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++++.. ......+...+.+.+ +++++.
T Consensus        76 ~~~~~~-~~~~~~~~~~~~~~~-~~~ii~  102 (144)
T 2hmt_A           76 VAIGAN-IQASTLTTLLLKELD-IPNIWV  102 (144)
T ss_dssp             ECCCSC-HHHHHHHHHHHHHTT-CSEEEE
T ss_pred             ECCCCc-hHHHHHHHHHHHHcC-CCeEEE
Confidence            999864 123345667777888 776664

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.91  E-value=2.9e-08  Score=74.12  Aligned_cols=101  Identities=13%  Similarity=0.163  Sum_probs=74.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~v   80 (263)
                      |..++++|+|+ |.+|+.+++.|.+.|++|+++++++    +++.+.+......++.++.+|.++++.++++ ++++|.+
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~v   75 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence            44578999995 9999999999999999999999972    1222222322245688999999999999887 8899999


Q ss_pred             EEcCCCccchhHHHHHHHHHHh-CCcceeee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEA-GNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~-~~~~~~i~  110 (263)
                      |.+.+..  .....+...+++. + ..+++.
T Consensus        76 i~~~~~d--~~n~~~~~~a~~~~~-~~~ii~  103 (153)
T 1id1_A           76 LALSDND--ADNAFVVLSAKDMSS-DVKTVL  103 (153)
T ss_dssp             EECSSCH--HHHHHHHHHHHHHTS-SSCEEE
T ss_pred             EEecCCh--HHHHHHHHHHHHHCC-CCEEEE
Confidence            9998754  2334455566665 4 455553

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.83  E-value=2.3e-08  Score=85.46  Aligned_cols=90  Identities=20%  Similarity=0.226  Sum_probs=73.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      .|||+|.|| |++|+.+++.|.+ .++|++.+|+     .++.+.+    ...+..+..|+.|.+++.++++++|+||++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~-----~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVN-----NENLEKV----KEFATPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHH----TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcC-----HHHHHHH----hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            478999998 9999999998865 4899999998     4444332    345678899999999999999999999999


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++.   ....++++|.+++ + +++
T Consensus        85 ~p~~---~~~~v~~~~~~~g-~-~yv  105 (365)
T 3abi_A           85 LPGF---LGFKSIKAAIKSK-V-DMV  105 (365)
T ss_dssp             CCGG---GHHHHHHHHHHHT-C-EEE
T ss_pred             cCCc---ccchHHHHHHhcC-c-ceE
Confidence            9875   3457899999998 4 455

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.82  E-value=5.6e-08  Score=71.04  Aligned_cols=97  Identities=18%  Similarity=0.252  Sum_probs=71.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv   81 (263)
                      ++|+++|+|+ |.+|+.+++.|.+.|++|++++|+     +++.+.+..  ..++..+.+|..+.+.+.+. ++++|++|
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~-----~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi   74 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYI   74 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHH--hcCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence            3578999996 999999999999999999999998     444432221  12566788999998887765 67899999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++.+...  ....+...+...+ .++++.
T Consensus        75 ~~~~~~~--~~~~~~~~~~~~~-~~~ii~  100 (140)
T 1lss_A           75 AVTGKEE--VNLMSSLLAKSYG-INKTIA  100 (140)
T ss_dssp             ECCSCHH--HHHHHHHHHHHTT-CCCEEE
T ss_pred             EeeCCch--HHHHHHHHHHHcC-CCEEEE
Confidence            9987542  2334556677777 777765

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.80  E-value=1e-07  Score=80.18  Aligned_cols=99  Identities=15%  Similarity=0.196  Sum_probs=69.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcE-EEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVN-LVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++|+|+||||+|++|+.++..|+..|  ++|++++++.     +... ..++...... .+.+ +.+.+++.++++++|+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~-----~~~~-~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDv   79 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN-----APGV-TADISHMDTGAVVRG-FLGQQQLEAALTGMDL   79 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS-----HHHH-HHHHHTSCSSCEEEE-EESHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC-----cHhH-HHHhhcccccceEEE-EeCCCCHHHHcCCCCE
Confidence            35799999999999999999999998  7899988773     2111 1111111111 1222 3346678889999999


Q ss_pred             EEEcCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           80 VISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        80 vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |||++|...             ...++++++++.+.+ .+.++
T Consensus        80 Vi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~v  121 (326)
T 1smk_A           80 IIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIV  121 (326)
T ss_dssp             EEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred             EEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEE
Confidence            999998664             245678899999888 77655

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.80  E-value=2.5e-08  Score=78.81  Aligned_cols=74  Identities=18%  Similarity=0.209  Sum_probs=56.1

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      +.+|+++||||                ||++|.+++++|+++|++|++++++....          . ..++  ...|+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~----------~-~~g~--~~~dv~   72 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------T-PPFV--KRVDVM   72 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------C-CTTE--EEEECC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc----------c-CCCC--eEEccC
Confidence            46899999999                69999999999999999999988874210          0 1122  356888


Q ss_pred             CHHHHHH----HhcCcCEEEEcCCCcc
Q 044721           66 NHESLVK----AIKQVDVVISTVGHTL   88 (263)
Q Consensus        66 ~~~~~~~----~~~~~d~vv~~a~~~~   88 (263)
                      +.+++.+    .+.++|++|||||...
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            8665544    3457999999999764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.78  E-value=3.4e-08  Score=86.83  Aligned_cols=90  Identities=20%  Similarity=0.305  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++++|+|+|+ |++|+++++.|++. |++|++++|+     .++.+.+...  .++..+.+|+.|.+++.++++++|+||
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~-----~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~~~DvVI   93 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT-----LANAQALAKP--SGSKAISLDVTDDSALDKVLADNDVVI   93 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS-----HHHHHHHHGG--GTCEEEECCTTCHHHHHHHHHTSSEEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC-----HHHHHHHHHh--cCCcEEEEecCCHHHHHHHHcCCCEEE
Confidence            4678999997 99999999999998 6899999998     5554432221  246777899999999999999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      |+++...   ...+.+++.+.+
T Consensus        94 n~tp~~~---~~~v~~a~l~~g  112 (467)
T 2axq_A           94 SLIPYTF---HPNVVKSAIRTK  112 (467)
T ss_dssp             ECSCGGG---HHHHHHHHHHHT
T ss_pred             ECCchhh---hHHHHHHHHhcC
Confidence            9998652   122444444444

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.75  E-value=3.1e-08  Score=78.47  Aligned_cols=75  Identities=23%  Similarity=0.411  Sum_probs=54.9

Q ss_pred             CCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC
Q 044721            3 SKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN   66 (263)
Q Consensus         3 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   66 (263)
                      .+|++|||||                ||++|.+++++|+++|++|++++|+.... +        ....++..  .|+..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~--------~~~~~~~~--~~v~s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P--------EPHPNLSI--REITN   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C--------CCCTTEEE--EECCS
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c--------cCCCCeEE--EEHhH
Confidence            5799999999                99999999999999999999999984311 0        00123443  35555


Q ss_pred             HHH----HHHHhcCcCEEEEcCCCcc
Q 044721           67 HES----LVKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        67 ~~~----~~~~~~~~d~vv~~a~~~~   88 (263)
                      .++    +.+.+.++|++||+|+...
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCcccc
Confidence            544    3445568999999999765

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.65  E-value=5.3e-07  Score=67.33  Aligned_cols=96  Identities=18%  Similarity=0.308  Sum_probs=70.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~   82 (263)
                      +++++|+|+ |.+|+.+++.|.+.|++|++++|+     +++.+.+..  ..+...+.+|..+++.+.++ ++++|++|.
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~-----~~~~~~~~~--~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKN-----EYAFHRLNS--EFSGFTVVGDAAEFETLKECGMEKADMVFA   90 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----GGGGGGSCT--TCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHh--cCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence            578999995 999999999999999999999998     444432221  23566788999988877765 778999999


Q ss_pred             cCCCccchhHHHHHHHHHH-hCCcceeee
Q 044721           83 TVGHTLLGDQVKIIAAIKE-AGNIKRFFP  110 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~-~~~~~~~i~  110 (263)
                      +.+...  ....+...+.. .+ ..+++.
T Consensus        91 ~~~~~~--~~~~~~~~~~~~~~-~~~iv~  116 (155)
T 2g1u_A           91 FTNDDS--TNFFISMNARYMFN-VENVIA  116 (155)
T ss_dssp             CSSCHH--HHHHHHHHHHHTSC-CSEEEE
T ss_pred             EeCCcH--HHHHHHHHHHHHCC-CCeEEE
Confidence            988642  33445556665 45 555554

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.62  E-value=4.5e-08  Score=82.45  Aligned_cols=104  Identities=13%  Similarity=0.080  Sum_probs=67.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|+||||+|++|++++..|+..|.       +|++++++.+.. .++.+ ...++......+ ..|+....++.++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~-~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKA-QKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHH-HHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccc-cccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence            57999999999999999999999885       688877761000 00111 111121111111 235555566788999


Q ss_pred             CcCEEEEcCCCcc-------------chhHHHHHHHHHHh-CCcc-eeee
Q 044721           76 QVDVVISTVGHTL-------------LGDQVKIIAAIKEA-GNIK-RFFP  110 (263)
Q Consensus        76 ~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~-~~~~-~~i~  110 (263)
                      ++|+|||+||...             ...++++++++.+. + .+ ++++
T Consensus        83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~-p~a~ii~  131 (329)
T 1b8p_A           83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVAS-RNIKVLV  131 (329)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence            9999999999764             23357888888887 4 44 4543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.53  E-value=1e-06  Score=69.63  Aligned_cols=95  Identities=19%  Similarity=0.300  Sum_probs=71.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++     +++.+.+..  ..++.++.+|.++++.++++ ++++|.+|.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~-----~~~~~~l~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKD-----RELCEEFAK--KLKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHHH--HSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHH--HcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            57999996 999999999999999999999998     555443222  23578899999999999886 7899999988


Q ss_pred             CCCccchhHHHHHHHHHH-hCCcceeee
Q 044721           84 VGHTLLGDQVKIIAAIKE-AGNIKRFFP  110 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~-~~~~~~~i~  110 (263)
                      .+...  ....+...+++ .+ ..+++.
T Consensus        73 ~~~d~--~n~~~~~~a~~~~~-~~~iia   97 (218)
T 3l4b_C           73 TPRDE--VNLFIAQLVMKDFG-VKRVVS   97 (218)
T ss_dssp             CSCHH--HHHHHHHHHHHTSC-CCEEEE
T ss_pred             cCCcH--HHHHHHHHHHHHcC-CCeEEE
Confidence            87542  23334445555 45 666663

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.47  E-value=1.2e-06  Score=67.22  Aligned_cols=89  Identities=16%  Similarity=0.259  Sum_probs=69.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH--hcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA--IKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~v   80 (263)
                      +++++|+| .|.+|+.+++.|.+. |++|++++++     +++.+.+.   ..++.++.+|.++++.+.++  ++++|.+
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~-----~~~~~~~~---~~g~~~~~gd~~~~~~l~~~~~~~~ad~v  109 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIR-----EEAAQQHR---SEGRNVISGDATDPDFWERILDTGHVKLV  109 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESC-----HHHHHHHH---HTTCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECC-----HHHHHHHH---HCCCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence            56899999 599999999999999 9999999998     55544332   34577888999999888887  7899999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhC
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      |.+.+..  .....++..+...+
T Consensus       110 i~~~~~~--~~~~~~~~~~~~~~  130 (183)
T 3c85_A          110 LLAMPHH--QGNQTALEQLQRRN  130 (183)
T ss_dssp             EECCSSH--HHHHHHHHHHHHTT
T ss_pred             EEeCCCh--HHHHHHHHHHHHHC
Confidence            9988753  23445556666655

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.43  E-value=3.7e-07  Score=70.96  Aligned_cols=75  Identities=21%  Similarity=0.388  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH---HHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES---LVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~   77 (263)
                      .+++++|+||+|+||..+++.+...|++|++++|+     +++.+.+..+   +... ..|..+.+.   +.+...  ++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~~~~~~~~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLSRL---GVEY-VGDSRSVDFADEILELTDGYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHTT---CCSE-EEETTCSTHHHHHHHHTTTCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCE-EeeCCcHHHHHHHHHHhCCCCC
Confidence            46799999999999999999999999999999988     5454433332   2222 246665433   333332  69


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       109 D~vi~~~g~  117 (198)
T 1pqw_A          109 DVVLNSLAG  117 (198)
T ss_dssp             EEEEECCCT
T ss_pred             eEEEECCch
Confidence            999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.43  E-value=1.2e-06  Score=64.31  Aligned_cols=88  Identities=22%  Similarity=0.348  Sum_probs=68.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~   82 (263)
                      .++++|.|. |.+|+.+++.|.+.|++|++++++     +++.+.+.   ..++.++.+|.++++.++++ ++++|.+|.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~-----~~~~~~~~---~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETS-----RTRVDELR---ERGVRAVLGNAANEEIMQLAHLECAKWLIL   77 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHH---HTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHH---HcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence            357999995 999999999999999999999999     55554333   34678899999999988875 678999999


Q ss_pred             cCCCccchhHHHHHHHHHHh
Q 044721           83 TVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~  102 (263)
                      +.+...  ....++..+++.
T Consensus        78 ~~~~~~--~n~~~~~~a~~~   95 (140)
T 3fwz_A           78 TIPNGY--EAGEIVASARAK   95 (140)
T ss_dssp             CCSCHH--HHHHHHHHHHHH
T ss_pred             ECCChH--HHHHHHHHHHHH
Confidence            887542  223344555554

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.38  E-value=1.7e-06  Score=72.27  Aligned_cols=96  Identities=21%  Similarity=0.204  Sum_probs=63.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEc--CCCCCCcchhhh----hhhh---ccCCcEEEEccCCCHHHHHHH
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVR--ESTLSAPSKSQL----LDHF---KKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~----~~~~---~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      |||+||||+|++|++++..|+..|.  +++++++  +     +++.+.    +.+.   .+..+.+...    .+++.++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~a   71 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS-----INKLEGLREDIYDALAGTRSDANIYVE----SDENLRI   71 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG-----HHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGG
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCc-----hhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHH
Confidence            4899999999999999999998884  5777777  4     222211    1111   1112222221    1235667


Q ss_pred             hcCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceeee
Q 044721           74 IKQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++++|+|||+||...             ...++++++++.+.+ -..++.
T Consensus        72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv  120 (313)
T 1hye_A           72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFV  120 (313)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEE
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEE
Confidence            999999999999764             234678899998886 344444

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.37  E-value=1.7e-06  Score=69.03  Aligned_cols=92  Identities=17%  Similarity=0.210  Sum_probs=71.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~   82 (263)
                      .++++|+|+ |.+|+.+++.|.+.|+ |++++++     +++.+.+.    .++.++.+|.++++.++++ ++++|.+|.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~-----~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRKKVLR----SGANFVHGDPTRVSDLEKANVRGARAVIV   77 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCG-----GGHHHHHH----TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECC-----HHHHHHHh----cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence            468999996 9999999999999999 9999888     44443222    4688999999999999887 889999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcc-eee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIK-RFF  109 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~-~~i  109 (263)
                      +.+..  .....+...+++.+ .+ +++
T Consensus        78 ~~~~d--~~n~~~~~~a~~~~-~~~~ii  102 (234)
T 2aef_A           78 DLESD--SETIHCILGIRKID-ESVRII  102 (234)
T ss_dssp             CCSCH--HHHHHHHHHHHHHC-SSSEEE
T ss_pred             cCCCc--HHHHHHHHHHHHHC-CCCeEE
Confidence            87753  23344556777777 65 555

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.33  E-value=1.2e-06  Score=74.99  Aligned_cols=76  Identities=20%  Similarity=0.302  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|+ |.||+.+++.|...|++|++++|+     +++.+.+....+..   +.+|..+.+++.+.++++|+||+
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~-----~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVN-----HKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEE
Confidence            4689999998 999999999999999999999998     55544333211222   45677888889999999999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +++..
T Consensus       236 ~~g~~  240 (369)
T 2eez_A          236 AVLVP  240 (369)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            99865

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.31  E-value=1.5e-07  Score=78.26  Aligned_cols=92  Identities=12%  Similarity=0.048  Sum_probs=62.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEc--CCCCCCcchhhh-hhhhc-----cCCcEEEEccCCCHHHHHHHh
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVR--ESTLSAPSKSQL-LDHFK-----KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~-~~~~~-----~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      |||+||||+|++|++++..|+..|.  +++++++  +     +++.+. ..++.     ..++.+.. +  +    .+++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~   68 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK-----EDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDT   68 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG-----HHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCC-----hhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHh
Confidence            5899999999999999999998875  5777777  4     222211 11111     12333332 2  2    4568


Q ss_pred             cCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           75 KQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        75 ~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++|+|||+||...             ...++++++++.+.+ .+.++
T Consensus        69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~v  115 (303)
T 1o6z_A           69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYIS  115 (303)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEE
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEE
Confidence            89999999999764             234678888888887 76655

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.24  E-value=1.8e-06  Score=72.62  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH----HHHHh-cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES----LVKAI-KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~-~~~   77 (263)
                      .+++++|+|++|+||..+++.+...|++|++++|+     +++.+.++.+   +.. ...|..+.++    +.+.. .++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~~---g~~-~~~d~~~~~~~~~~~~~~~~~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQI---GFD-AAFNYKTVNSLEEALKKASPDGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCS-EEEETTSCSCHHHHHHHHCTTCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCc-EEEecCCHHHHHHHHHHHhCCCC
Confidence            36789999999999999999999999999999988     5555544333   222 2347765222    23322 269


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1v3u_A          216 DCYFDNVGG  224 (333)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEECCCh
Confidence            999999995

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.21  E-value=2.9e-06  Score=71.86  Aligned_cols=75  Identities=19%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh----c-Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI----K-QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----~-~~   77 (263)
                      .+++++|+|++|.||..+++.+...|++|++++|+     +++.+.+..+   +.. ...|+.+.+++.+.+    . ++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~-----~~~~~~~~~~---g~~-~~~d~~~~~~~~~~~~~~~~~~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG-----EGKEELFRSI---GGE-VFIDFTKEKDIVGAVLKATDGGA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS-----TTHHHHHHHT---TCC-EEEETTTCSCHHHHHHHHHTSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC-----HHHHHHHHHc---CCc-eEEecCccHhHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999988     4444444433   222 224776433333332    2 69


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       240 D~vi~~~g~  248 (347)
T 2hcy_A          240 HGVINVSVS  248 (347)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCc
Confidence            999999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.18  E-value=7.7e-06  Score=68.06  Aligned_cols=82  Identities=16%  Similarity=0.220  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhh-hhhhhcc-CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKK-LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++++++|+|+ |++|++++..|++.|+ +|+++.|+++.  .++.+ ..+.+.. ..+.+...++.+.+++.+.+.++|+
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~--~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDF--YANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTT--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCch--HHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            5789999996 8999999999999998 79999998321  11222 1222211 1244555678888888888899999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      |||+.+..
T Consensus       230 IINaTp~G  237 (315)
T 3tnl_A          230 FTNATGVG  237 (315)
T ss_dssp             EEECSSTT
T ss_pred             EEECccCC
Confidence            99998654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.14  E-value=3.3e-06  Score=70.83  Aligned_cols=74  Identities=19%  Similarity=0.175  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH---HHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES---LVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~   77 (263)
                      .+++++|+||+|+||..+++.+...|++|++++|+     +++.+.+..+ +  .. ...|..+.+.   +.+...  ++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~~-g--~~-~~~~~~~~~~~~~~~~~~~~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA-G--AW-QVINYREEDLVERLKEITGGKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH-T--CS-EEEETTTSCHHHHHHHHTTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc-C--CC-EEEECCCccHHHHHHHHhCCCCc
Confidence            46799999999999999999999999999999998     5555544443 2  22 2246655433   333332  69


Q ss_pred             CEEEEcCC
Q 044721           78 DVVISTVG   85 (263)
Q Consensus        78 d~vv~~a~   85 (263)
                      |++|+++|
T Consensus       211 D~vi~~~g  218 (327)
T 1qor_A          211 RVVYDSVG  218 (327)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCc
Confidence            99999999

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.13  E-value=2e-05  Score=68.26  Aligned_cols=91  Identities=20%  Similarity=0.348  Sum_probs=72.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~   82 (263)
                      .++|+|+|. |.+|+.+++.|.+.|++|++++++     +++.+.+.   ..++.++.+|.++++.++++ ++++|+||.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d-----~~~v~~~~---~~g~~vi~GDat~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHD-----PDHIETLR---KFGMKVFYGDATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECC-----HHHHHHHH---HTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHH---hCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence            468999995 999999999999999999999999     55554333   34678899999999999887 789999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcc
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      +.+..  .....++..+++.+ .+
T Consensus        75 ~~~~~--~~n~~i~~~ar~~~-p~   95 (413)
T 3l9w_A           75 AIDDP--QTNLQLTEMVKEHF-PH   95 (413)
T ss_dssp             CCSSH--HHHHHHHHHHHHHC-TT
T ss_pred             CCCCh--HHHHHHHHHHHHhC-CC
Confidence            88753  34455666666666 44

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.12  E-value=4e-06  Score=70.52  Aligned_cols=75  Identities=16%  Similarity=0.220  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~   77 (263)
                      .+++++|+||+|+||..+++.+...|++|++++|+     +++.+.+..+ +  .. ...|..+.+   .+.+...  ++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~-g--~~-~~~d~~~~~~~~~i~~~~~~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST-----EEKAETARKL-G--CH-HTINYSTQDFAEVVREITGGKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH-T--CS-EEEETTTSCHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc-C--CC-EEEECCCHHHHHHHHHHhCCCCC
Confidence            46789999999999999999999999999999998     5555544443 2  22 224665543   3334332  69


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999996

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.09  E-value=3.6e-06  Score=70.70  Aligned_cols=99  Identities=17%  Similarity=0.116  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--C-----EEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--P-----TFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      +.++|+||||+|+||++++..|+..|.  +     +++++++..   .++.+ ...++.+...... .++....+..+.+
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~---~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~   77 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLL-KDVIATDKEEIAF   77 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc---cccchhhHhhhHhhhhccc-CCEEEcCCcHHHh
Confidence            357899999999999999999998874  5     888888621   01211 1111211110001 1222223456789


Q ss_pred             cCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcc
Q 044721           75 KQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        75 ~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~  106 (263)
                      +++|+||++||...             ....+++++++.+.+ .+
T Consensus        78 ~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~-~~  121 (333)
T 5mdh_A           78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA-KK  121 (333)
T ss_dssp             TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS-CT
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence            99999999998764             233578888998887 65

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.08  E-value=6.1e-06  Score=67.43  Aligned_cols=74  Identities=18%  Similarity=0.287  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++++++|+|+ |++|++++..|++.|++|+++.|+     .++.+.+ +.+.... .+...|+   +++.+  .++|+||
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~-----~~~~~~la~~~~~~~-~~~~~~~---~~~~~--~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTG-SIQALSM---DELEG--HEFDLII  185 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGS-SEEECCS---GGGTT--CCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHhhccC-CeeEecH---HHhcc--CCCCEEE
Confidence            5689999997 899999999999999999999998     5444322 2221111 1212333   22222  5899999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      |+++...
T Consensus       186 n~t~~~~  192 (271)
T 1nyt_A          186 NATSSGI  192 (271)
T ss_dssp             ECCSCGG
T ss_pred             ECCCCCC
Confidence            9998753

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.06  E-value=1.1e-05  Score=68.12  Aligned_cols=94  Identities=19%  Similarity=0.216  Sum_probs=57.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEE-cCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH---PTFVLV-RESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      ||++++|+|.||||++|+.+++.|.++++   +++.+. |+....   ...    +.  +......|. +++    .+++
T Consensus         3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~---~~~----~~--g~~i~~~~~-~~~----~~~~   68 (340)
T 2hjs_A            3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ---RMG----FA--ESSLRVGDV-DSF----DFSS   68 (340)
T ss_dssp             --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC---EEE----ET--TEEEECEEG-GGC----CGGG
T ss_pred             CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC---ccc----cC--CcceEEecC-CHH----HhcC
Confidence            55567999999999999999999997764   455544 321110   000    11  111111122 121    2578


Q ss_pred             cCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           77 VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +|++|.+.|..   ...++++.+.+.| ++.+..|+
T Consensus        69 ~DvV~~a~g~~---~s~~~a~~~~~aG-~kvId~Sa  100 (340)
T 2hjs_A           69 VGLAFFAAAAE---VSRAHAERARAAG-CSVIDLSG  100 (340)
T ss_dssp             CSEEEECSCHH---HHHHHHHHHHHTT-CEEEETTC
T ss_pred             CCEEEEcCCcH---HHHHHHHHHHHCC-CEEEEeCC
Confidence            99999998854   4567788888888 77555554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.05  E-value=2.6e-05  Score=65.02  Aligned_cols=92  Identities=16%  Similarity=0.152  Sum_probs=61.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC---HHHHHHHhcCcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN---HESLVKAIKQVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~d~   79 (263)
                      |||.|+||+|++|+.++..|+..|  .+|++++++.     .+. ...++.....   ..++..   .++.+++++++|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-----~~~-~a~dL~~~~~---~~~l~~~~~t~d~~~a~~~aDv   71 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-----TPG-VAADLSHIET---RATVKGYLGPEQLPDCLKGCDV   71 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-----HHH-HHHHHTTSSS---SCEEEEEESGGGHHHHHTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-----cHH-HHHHHhccCc---CceEEEecCCCCHHHHhCCCCE
Confidence            589999999999999999999888  6899999984     111 1112211110   012221   2456778999999


Q ss_pred             EEEcCCCccc-------------hhHHHHHHHHHHhCCcc
Q 044721           80 VISTVGHTLL-------------GDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        80 vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~  106 (263)
                      ||+++|....             ...+.+++.+.+.. .+
T Consensus        72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~  110 (314)
T 1mld_A           72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PD  110 (314)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TT
T ss_pred             EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CC
Confidence            9999987641             23466777777776 44

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.04  E-value=1e-05  Score=68.60  Aligned_cols=75  Identities=12%  Similarity=0.194  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~   77 (263)
                      .+++++|+||+|++|..+++.+...|++|++++|+     +++.+.+..+   +.. ...|..+.+   .+.+...  ++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~-~~~d~~~~~~~~~~~~~~~~~~~  240 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQN---GAH-EVFNHREVNYIDKIKKYVGEKGI  240 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCS-EEEETTSTTHHHHHHHHHCTTCE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHc---CCC-EEEeCCCchHHHHHHHHcCCCCc
Confidence            36789999999999999999999999999999998     5555544443   222 224665543   3334443  69


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       241 D~vi~~~G~  249 (351)
T 1yb5_A          241 DIIIEMLAN  249 (351)
T ss_dssp             EEEEESCHH
T ss_pred             EEEEECCCh
Confidence            999999985

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.04  E-value=1.1e-05  Score=68.57  Aligned_cols=76  Identities=16%  Similarity=0.238  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~   77 (263)
                      .+++++|+||+|+||..+++.+...|++|++++|+     +++.+.+..+.   .. ...|..+.+   .+.+...  ++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGS-----QKKLQMAEKLG---AA-AGFNYKKEDFSEATLKFTKGAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHT---CS-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHcC---Cc-EEEecCChHHHHHHHHHhcCCCc
Confidence            36789999999999999999999999999999998     55555444442   22 224665533   3444443  69


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|+|+|..
T Consensus       233 d~vi~~~G~~  242 (354)
T 2j8z_A          233 NLILDCIGGS  242 (354)
T ss_dssp             EEEEESSCGG
T ss_pred             eEEEECCCch
Confidence            9999999964

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.01  E-value=1.8e-06  Score=67.76  Aligned_cols=75  Identities=19%  Similarity=0.202  Sum_probs=50.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|+|+||+|++|+++++.|++.|++|++++|+     +++.+.+....+..+.  ..|+. .+++.++++++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence            479999999999999999999999999999998     4443322111010000  01121 134556677899999998


Q ss_pred             CCc
Q 044721           85 GHT   87 (263)
Q Consensus        85 ~~~   87 (263)
                      ...
T Consensus        73 ~~~   75 (212)
T 1jay_A           73 PWE   75 (212)
T ss_dssp             CHH
T ss_pred             Chh
Confidence            754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.00  E-value=6.4e-06  Score=69.62  Aligned_cols=75  Identities=16%  Similarity=0.269  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhccCCcEEEEccCCCH----HHHHHHh-cC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKKLGVNLVIGDVLNH----ESLVKAI-KQ   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~----~~~~~~~-~~   76 (263)
                      .+++++|+|++|.+|..+++.+...|++|++++|+     +++.+.+. .+   +... ..|..+.    +.+.+.. .+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~~~---g~~~-~~d~~~~~~~~~~~~~~~~~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS-----KEKVDLLKTKF---GFDD-AFNYKEESDLTAALKRCFPNG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTS---CCSE-EEETTSCSCSHHHHHHHCTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc---CCce-EEecCCHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999988     55555443 33   2222 2366543    2333332 26


Q ss_pred             cCEEEEcCCC
Q 044721           77 VDVVISTVGH   86 (263)
Q Consensus        77 ~d~vv~~a~~   86 (263)
                      +|++|+++|.
T Consensus       226 ~d~vi~~~g~  235 (345)
T 2j3h_A          226 IDIYFENVGG  235 (345)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCH
Confidence            9999999985

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.99  E-value=1.1e-05  Score=70.79  Aligned_cols=77  Identities=18%  Similarity=0.352  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv   81 (263)
                      +.|+|+|.|+ |.+|+++++.|.++|++|++++++     +++.+.+..  .-++.++.+|-++++.++++ ++.+|.+|
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d-----~~~~~~~~~--~~~~~~i~Gd~~~~~~L~~Agi~~ad~~i   73 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKD-----GDRLRELQD--KYDLRVVNGHASHPDVLHEAGAQDADMLV   73 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESC-----HHHHHHHHH--HSSCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHHH--hcCcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence            4689999996 999999999999999999999999     656554332  23678999999999999886 67899999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.+..
T Consensus        74 a~t~~D   79 (461)
T 4g65_A           74 AVTNTD   79 (461)
T ss_dssp             ECCSCH
T ss_pred             EEcCCh
Confidence            876643

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.98  E-value=1.2e-05  Score=67.93  Aligned_cols=99  Identities=11%  Similarity=0.103  Sum_probs=58.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ||++++|.|.||||++|+.+++.|.+... +++.+.+..+.. .........+.+..    ...+.+.+   + +.++|+
T Consensus         1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~~g~~----~~~~~~~~---~-~~~vDv   71 (345)
T 2ozp_A            1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNLRGRT----NLKFVPPE---K-LEPADI   71 (345)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGGTTTC----CCBCBCGG---G-CCCCSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchhcCcc----cccccchh---H-hcCCCE
Confidence            67778999999999999999999997753 777665542210 11110001111100    11122322   2 579999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ||.++|..   ....+++.+.+.| ++.+-.|+
T Consensus        72 V~~a~g~~---~s~~~a~~~~~aG-~~VId~Sa  100 (345)
T 2ozp_A           72 LVLALPHG---VFAREFDRYSALA-PVLVDLSA  100 (345)
T ss_dssp             EEECCCTT---HHHHTHHHHHTTC-SEEEECSS
T ss_pred             EEEcCCcH---HHHHHHHHHHHCC-CEEEEcCc
Confidence            99999865   3566777777888 66333454

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.96  E-value=1.5e-05  Score=65.91  Aligned_cols=76  Identities=16%  Similarity=0.119  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++++|+|+ |++|++++..|++.|+ +|+++.|+     .++.+.+.+..+....    ++.+.+++.+.+.++|+||
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~-----~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRT-----VEKAERLVREGDERRS----AYFSLAEAETRLAEYDIII  209 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSS-----HHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEE
Confidence            4689999996 8999999999999997 89999998     5554433221111110    1223356777888999999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      ++.+...
T Consensus       210 n~t~~~~  216 (297)
T 2egg_A          210 NTTSVGM  216 (297)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9998653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.96  E-value=1.7e-05  Score=66.72  Aligned_cols=75  Identities=20%  Similarity=0.321  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHH---HHHHh-cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHES---LVKAI-KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~---~~~~~-~~~   77 (263)
                      .+++++|+|++|.||..+++.+...|++|++++|+     +++.+.+ +.+   +... ..|..+.+.   +.+.. .++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG-----AEKCRFLVEEL---GFDG-AIDYKNEDLAAGLKRECPKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTT---CCSE-EEETTTSCHHHHHHHHCTTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc---CCCE-EEECCCHHHHHHHHHhcCCCc
Confidence            46799999999999999999999999999999998     5555544 343   2222 235555332   33322 369


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       220 d~vi~~~g~  228 (336)
T 4b7c_A          220 DVFFDNVGG  228 (336)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEECCCc
Confidence            999999994

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.95  E-value=1.7e-05  Score=67.01  Aligned_cols=97  Identities=13%  Similarity=0.099  Sum_probs=58.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-----C-CEEEEEcCCCCCCcchhh-hhhhhcc-CCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG-----H-PTFVLVRESTLSAPSKSQ-LLDHFKK-LGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~   73 (263)
                      |+|++|+|.||||++|+.+++.|++++     . +++.+.+..+.  ..... ....+.. ..+.+  .|+ +++    .
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~a--gk~~~~~~~~l~~~~~~~~--~~~-~~~----~   77 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSA--GSTLGEHHPHLTPLAHRVV--EPT-EAA----V   77 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCT--TSBGGGTCTTCGGGTTCBC--EEC-CHH----H
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcC--CCchhhhcccccccceeee--ccC-CHH----H
Confidence            345799999999999999999999887     3 66666543211  01111 0011111 12222  122 222    3


Q ss_pred             hcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           74 IKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ++++|++|.++|...   ..++++.+ +.| ++.+-.|+
T Consensus        78 ~~~~DvVf~alg~~~---s~~~~~~~-~~G-~~vIDlSa  111 (352)
T 2nqt_A           78 LGGHDAVFLALPHGH---SAVLAQQL-SPE-TLIIDCGA  111 (352)
T ss_dssp             HTTCSEEEECCTTSC---CHHHHHHS-CTT-SEEEECSS
T ss_pred             hcCCCEEEECCCCcc---hHHHHHHH-hCC-CEEEEECC
Confidence            568999999998753   45667777 777 65444443

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.93  E-value=2.8e-05  Score=65.48  Aligned_cols=91  Identities=16%  Similarity=0.194  Sum_probs=71.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      ++++|.|. |.+|+.+++.|.++|+ |++++++     +++.+ +.   ..++.++.+|.+|++.++++ ++++|.++.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~-----~~~~~-~~---~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~  184 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRKK-VL---RSGANFVHGDPTRVSDLEKANVRGARAVIVD  184 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCG-----GGHHH-HH---HTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCC-----hhhhh-HH---hCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence            47999996 9999999999999999 9999888     54443 32   35789999999999999987 8899999988


Q ss_pred             CCCccchhHHHHHHHHHHhCCcc-eee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIK-RFF  109 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~-~~i  109 (263)
                      .+..  ..+......+++.+ .+ +++
T Consensus       185 ~~~d--~~n~~~~~~ar~~~-~~~~ii  208 (336)
T 1lnq_A          185 LESD--SETIHCILGIRKID-ESVRII  208 (336)
T ss_dssp             CSSH--HHHHHHHHHHHTTC-TTSEEE
T ss_pred             CCcc--HHHHHHHHHHHHHC-CCCeEE
Confidence            7643  33444556667766 55 444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.93  E-value=2.6e-05  Score=66.38  Aligned_cols=75  Identities=20%  Similarity=0.292  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +++++|+|+ |.+|+.+++.|...|++|++++|+     +++.+.+.......+..   +..+.+++.+.+.++|+||++
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~-----~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGA  237 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhhCceeEe---eeCCHHHHHHHHcCCCEEEEC
Confidence            578999998 999999999999999999999998     55555444332222222   223556777788899999999


Q ss_pred             CCCc
Q 044721           84 VGHT   87 (263)
Q Consensus        84 a~~~   87 (263)
                      ++..
T Consensus       238 ~~~~  241 (361)
T 1pjc_A          238 VLVP  241 (361)
T ss_dssp             CCCT
T ss_pred             CCcC
Confidence            9764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.92  E-value=2.1e-05  Score=66.73  Aligned_cols=73  Identities=19%  Similarity=0.240  Sum_probs=52.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCCCHH---HHHHHhc-CcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVLNHE---SLVKAIK-QVD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~---~~~~~~~-~~d   78 (263)
                      ++++|+||+|+||..+++.+...|+ +|++++++     +++.+.+.. +   +.. ...|..+.+   .+.+... ++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~-----~~~~~~~~~~~---g~~-~~~d~~~~~~~~~~~~~~~~~~d  232 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT-----HEKCILLTSEL---GFD-AAINYKKDNVAEQLRESCPAGVD  232 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHTS---CCS-EEEETTTSCHHHHHHHHCTTCEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHHHc---CCc-eEEecCchHHHHHHHHhcCCCCC
Confidence            8999999999999999999999999 99999988     555443332 3   222 234665533   2333332 699


Q ss_pred             EEEEcCCC
Q 044721           79 VVISTVGH   86 (263)
Q Consensus        79 ~vv~~a~~   86 (263)
                      ++|+|+|.
T Consensus       233 ~vi~~~G~  240 (357)
T 2zb4_A          233 VYFDNVGG  240 (357)
T ss_dssp             EEEESCCH
T ss_pred             EEEECCCH
Confidence            99999994

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.91  E-value=2.6e-05  Score=65.97  Aligned_cols=76  Identities=14%  Similarity=0.215  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHh--cC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAI--KQ   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~   76 (263)
                      .+++++|+|++|.||..+++.+... |++|++++++     +++.+.+..+ +  ... ..|..+.+   .+.++.  .+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~-----~~~~~~~~~~-g--~~~-~~~~~~~~~~~~~~~~~~~~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA-G--ADY-VINASMQDPLAEIRRITESKG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH-T--CSE-EEETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC-----HHHHHHHHHh-C--CCE-EecCCCccHHHHHHHHhcCCC
Confidence            4678999999999999999999999 9999999988     5555544444 2  221 23555433   355555  37


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|+++|..
T Consensus       241 ~d~vi~~~g~~  251 (347)
T 1jvb_A          241 VDAVIDLNNSE  251 (347)
T ss_dssp             EEEEEESCCCH
T ss_pred             ceEEEECCCCH
Confidence            99999999853

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.88  E-value=4.5e-06  Score=68.58  Aligned_cols=76  Identities=21%  Similarity=0.190  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ++++++|+|+ |++|++++..|++.|. +|+++.|+     .++.+.+ +.+.  .+.+.+...++.   ++.+.+.++|
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~~~D  196 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVGVDAR---GIEDVIAAAD  196 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSS-----HHHHHHHHHHHHHHHTSCCEEEECST---THHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHhcCC
Confidence            4789999997 9999999999999998 69999998     5444422 2221  122333344443   3456677899


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +|||+.+..
T Consensus       197 iVInaTp~G  205 (283)
T 3jyo_A          197 GVVNATPMG  205 (283)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCCCC
Confidence            999998653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.88  E-value=2.6e-05  Score=65.29  Aligned_cols=76  Identities=18%  Similarity=0.213  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   77 (263)
                      .+++++|+||+|.+|..+++.+...|++|++++++     +++.+.+..+.   ... ..|..+.   +.+.+...  ++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~G---a~~-~~~~~~~~~~~~~~~~~~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSS-----PEKAAHAKALG---AWE-TIDYSHEDVAKRVLELTDGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHHT---CSE-EEETTTSCHHHHHHHHTTTCCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcC---CCE-EEeCCCccHHHHHHHHhCCCCc
Confidence            36799999999999999999999999999999988     66665555442   211 2355443   33444443  69


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|+++|..
T Consensus       211 Dvvid~~g~~  220 (325)
T 3jyn_A          211 PVVYDGVGQD  220 (325)
T ss_dssp             EEEEESSCGG
T ss_pred             eEEEECCChH
Confidence            9999999963

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.88  E-value=1.7e-05  Score=66.82  Aligned_cols=98  Identities=11%  Similarity=0.112  Sum_probs=61.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |+++||.|+|++|++|+.++..|+..|  .+|++++++     +++.+- ..++......  ..++.-..+..++++++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-----~~k~~g~a~DL~~~~~~--~~~i~~t~d~~~al~dAD   78 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-----AVGLEGVAEEIRHCGFE--GLNLTFTSDIKEALTDAK   78 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-----HHHHHHHHHHHHHHCCT--TCCCEEESCHHHHHTTEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-----chhHHHHHHhhhhCcCC--CCceEEcCCHHHHhCCCC
Confidence            467899999999999999999999998  489999987     443331 1111110000  011111234567789999


Q ss_pred             EEEEcCCCcc-------------chhHHHHHHHHHHhCCcce
Q 044721           79 VVISTVGHTL-------------LGDQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        79 ~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~  107 (263)
                      +||.++|...             ....+.+.+.+.+.. .+-
T Consensus        79 vVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a  119 (343)
T 3fi9_A           79 YIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDC  119 (343)
T ss_dssp             EEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTC
T ss_pred             EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCc
Confidence            9999998764             122356677777776 544

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.87  E-value=2.9e-05  Score=65.28  Aligned_cols=75  Identities=15%  Similarity=0.269  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   77 (263)
                      .+++++|+||+|.+|..+++.+...|++|++++++     +++.+.+..+.   ... ..|..+.   +.+.+...  ++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~g---a~~-~~~~~~~~~~~~~~~~~~~~g~  218 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST-----DEKLKIAKEYG---AEY-LINASKEDILRQVLKFTNGKGV  218 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTT---CSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcC---CcE-EEeCCCchHHHHHHHHhCCCCc
Confidence            46789999999999999999999999999999998     55665555442   221 2344443   33444443  69


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999996

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.86  E-value=7.7e-05  Score=63.30  Aligned_cols=84  Identities=20%  Similarity=0.211  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ||++|+|.|.| .|.+|+.+++.|++.|++|++.+|+     +++.+.+..   .++.    ...+.+++.+..+.+|+|
T Consensus        19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~-----~~~~~~l~~---~g~~----~~~s~~e~~~~a~~~DvV   85 (358)
T 4e21_A           19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLN-----VNAVQALER---EGIA----GARSIEEFCAKLVKPRVV   85 (358)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHT---TTCB----CCSSHHHHHHHSCSSCEE
T ss_pred             hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHH---CCCE----EeCCHHHHHhcCCCCCEE
Confidence            56778999999 6999999999999999999999998     555443222   2221    122334333333344999


Q ss_pred             EEcCCCccchhHHHHHHHHH
Q 044721           81 ISTVGHTLLGDQVKIIAAIK  100 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~  100 (263)
                      |.+....   ....+++.+.
T Consensus        86 i~~vp~~---~v~~vl~~l~  102 (358)
T 4e21_A           86 WLMVPAA---VVDSMLQRMT  102 (358)
T ss_dssp             EECSCGG---GHHHHHHHHG
T ss_pred             EEeCCHH---HHHHHHHHHH
Confidence            9988765   3334444443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.86  E-value=3.8e-05  Score=65.71  Aligned_cols=76  Identities=22%  Similarity=0.151  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|+ |.||+.+++.+...|++|++++|+     +++.+.+....+..+   ..+..+.+++.+.++++|+||+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~-----~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~  237 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDIN-----IDKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIG  237 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEE
Confidence            4689999997 999999999999999999999998     555443333212222   2344556778888889999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +++..
T Consensus       238 ~~~~p  242 (377)
T 2vhw_A          238 AVLVP  242 (377)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            98754

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.84  E-value=2.2e-05  Score=58.64  Aligned_cols=75  Identities=12%  Similarity=0.107  Sum_probs=52.0

Q ss_pred             CChhHHHHHHHHHHCCCCEEEEEcCCCCCCc--chhhhhhhhccCCcEEEEccCCCH--HHHHHHhc------CcCEEEE
Q 044721           13 TGYIGKFIVEASVKAGHPTFVLVRESTLSAP--SKSQLLDHFKKLGVNLVIGDVLNH--ESLVKAIK------QVDVVIS   82 (263)
Q Consensus        13 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~------~~d~vv~   82 (263)
                      +|.++.++++.|++.|++|++..|+......  +..+.++.. +.++..+.+|++++  ++++++++      +-|++||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~-G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA-GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT-TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc-CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            4789999999999999999998886432211  111112222 33466778899998  88877664      2399999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      |||...
T Consensus       104 nAgg~r  109 (157)
T 3gxh_A          104 CLANYR  109 (157)
T ss_dssp             CSBSHH
T ss_pred             CCCCCC
Confidence            999753

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.84  E-value=0.00012  Score=58.94  Aligned_cols=103  Identities=17%  Similarity=0.132  Sum_probs=68.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC--------------Ccchhhhh-hhhc--cCC--cEEEEcc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQLL-DHFK--KLG--VNLVIGD   63 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~-~~~~--~~~--~~~~~~D   63 (263)
                      +++|+|.|+ |++|+.+++.|++.|. ++++++++.-..              ...|.+.+ +.+.  .+.  +..+..+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            468999995 9999999999999996 788888874110              00233222 1121  233  3444555


Q ss_pred             CCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           64 VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        64 ~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      +. .+.+.+.++++|+||.+....  .....+.+.+.+.+ ++.+..+
T Consensus       110 ~~-~~~~~~~~~~~DvVi~~~d~~--~~~~~l~~~~~~~~-~p~i~~~  153 (249)
T 1jw9_B          110 LD-DAELAALIAEHDLVLDCTDNV--AVRNQLNAGCFAAK-VPLVSGA  153 (249)
T ss_dssp             CC-HHHHHHHHHTSSEEEECCSSH--HHHHHHHHHHHHHT-CCEEEEE
T ss_pred             CC-HhHHHHHHhCCCEEEEeCCCH--HHHHHHHHHHHHcC-CCEEEee
Confidence            54 456777889999999987643  34455667778888 7766543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.83  E-value=8.4e-05  Score=61.73  Aligned_cols=82  Identities=11%  Similarity=0.210  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhh-hhhhhc-cCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFK-KLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .+++++|+|+ |++|++++..|++.|. +|+++.|+.+.  .++.+ ..+.+. ..+..+...++.+.+.+.+.+.++|+
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~--~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDF--FEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTH--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCch--HHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            4689999996 9999999999999998 79999998321  11222 112221 11233445567665455666778999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      |||+.+..
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99997654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.82  E-value=6.9e-06  Score=60.36  Aligned_cols=71  Identities=20%  Similarity=0.270  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +++++|.|+ |.+|+.+++.|.+.|++|++.+|+     +++.+.+ +.+ +  ....  +.   +++.++++++|+||.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~-----~~~~~~~a~~~-~--~~~~--~~---~~~~~~~~~~Divi~   86 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRN-----IDHVRAFAEKY-E--YEYV--LI---NDIDSLIKNNDVIIT   86 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESC-----HHHHHHHHHHH-T--CEEE--EC---SCHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHHh-C--CceE--ee---cCHHHHhcCCCEEEE
Confidence            579999995 999999999999999899999998     5454332 222 1  2221  22   234566779999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      +.+...
T Consensus        87 at~~~~   92 (144)
T 3oj0_A           87 ATSSKT   92 (144)
T ss_dssp             CSCCSS
T ss_pred             eCCCCC
Confidence            988653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.82  E-value=4.1e-05  Score=64.61  Aligned_cols=75  Identities=8%  Similarity=0.086  Sum_probs=55.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   77 (263)
                      .+++++|+|++|.+|..+++.+...|++|++++|+     +++.+.+..+ +  ... ..|..+.   +.+.+...  ++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~-g--a~~-~~d~~~~~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS-----EDKLRRAKAL-G--ADE-TVNYTHPDWPKEVRRLTGGKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH-T--CSE-EEETTSTTHHHHHHHHTTTTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc-C--CCE-EEcCCcccHHHHHHHHhCCCCc
Confidence            36789999999999999999999999999999998     5555544444 2  222 2466653   33444443  69


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|+++|.
T Consensus       237 d~vi~~~g~  245 (343)
T 2eih_A          237 DKVVDHTGA  245 (343)
T ss_dssp             EEEEESSCS
T ss_pred             eEEEECCCH
Confidence            999999993

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.81  E-value=9.6e-06  Score=66.81  Aligned_cols=75  Identities=13%  Similarity=0.128  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccC---CcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKL---GVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~---~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ++++++|+|+ |++|+++++.|++.| +|++++|+     .++.+.+ +.+...   .. .+.+|+.+.   .+.+.++|
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~-----~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~D  195 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRT-----VEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVD  195 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSS-----HHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCC
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECC-----HHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCC
Confidence            5789999998 599999999999999 99999998     4443322 222110   10 012233331   34567899


Q ss_pred             EEEEcCCCcc
Q 044721           79 VVISTVGHTL   88 (263)
Q Consensus        79 ~vv~~a~~~~   88 (263)
                      +||||+|...
T Consensus       196 ilVn~ag~~~  205 (287)
T 1nvt_A          196 IIINATPIGM  205 (287)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999998753

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.81  E-value=4.8e-05  Score=64.09  Aligned_cols=76  Identities=14%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   77 (263)
                      .+++++|+|++|.+|..+++.+...|++|++++++     +++.+.+..+.   ... ..|..+.   +.+.+...  ++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~lg---a~~-~~~~~~~~~~~~~~~~~~~~g~  214 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRN-----NKHTEELLRLG---AAY-VIDTSTAPLYETVMELTNGIGA  214 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHHT---CSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhCC---CcE-EEeCCcccHHHHHHHHhCCCCC
Confidence            36799999999999999999999999999999998     44555444442   221 2355443   33444433  79


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|+++|..
T Consensus       215 Dvvid~~g~~  224 (340)
T 3gms_A          215 DAAIDSIGGP  224 (340)
T ss_dssp             EEEEESSCHH
T ss_pred             cEEEECCCCh
Confidence            9999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.80  E-value=4.8e-05  Score=64.47  Aligned_cols=76  Identities=14%  Similarity=0.262  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHh-cCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAI-KQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~-~~~d   78 (263)
                      .+++++|+||+|.+|..+++.+...|++|++++|+     +++.+.+..+.   ... ..|..+.+   .+.+.. .++|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~lG---a~~-~~~~~~~~~~~~~~~~~~~g~D  237 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS-----TGKCEACERLG---AKR-GINYRSEDFAAVIKAETGQGVD  237 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHT---CSE-EEETTTSCHHHHHHHHHSSCEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhcC---CCE-EEeCCchHHHHHHHHHhCCCce
Confidence            36789999999999999999999999999999998     66665555542   221 23554432   333322 3799


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      ++|+++|..
T Consensus       238 vvid~~g~~  246 (353)
T 4dup_A          238 IILDMIGAA  246 (353)
T ss_dssp             EEEESCCGG
T ss_pred             EEEECCCHH
Confidence            999999964

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.80  E-value=6.2e-05  Score=63.51  Aligned_cols=77  Identities=16%  Similarity=0.302  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhc--CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIK--QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~   79 (263)
                      .+++++|+||+|.+|..+++.+...|++|++++++     +++.+.+..+. .. .++..+ .+ .+.+.+...  ++|+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~g-a~-~v~~~~-~~~~~~v~~~~~~~g~Dv  230 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR-----TAATEFVKSVG-AD-IVLPLE-EGWAKAVREATGGAGVDM  230 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHT-CS-EEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhcC-Cc-EEecCc-hhHHHHHHHHhCCCCceE
Confidence            36789999999999999999999999999999998     55555555542 11 222222 22 233444443  6999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|+++|..
T Consensus       231 vid~~g~~  238 (342)
T 4eye_A          231 VVDPIGGP  238 (342)
T ss_dssp             EEESCC--
T ss_pred             EEECCchh
Confidence            99999964

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.76  E-value=6.1e-05  Score=62.35  Aligned_cols=74  Identities=20%  Similarity=0.237  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+|++|.+|..+++.+...|++|++++++     +++.+.+..+   +... ..|..+.+++.+.+.++|++|+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~-~~~~~~~~~~~~~~~~~d~vid  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLAL---GAEE-AATYAEVPERAKAWGGLDLVLE  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHHT---TCSE-EEEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCCE-EEECCcchhHHHHhcCceEEEE
Confidence            46799999999999999999999999999999998     4454444443   2222 2455551334444589999999


Q ss_pred             cCCC
Q 044721           83 TVGH   86 (263)
Q Consensus        83 ~a~~   86 (263)
                       +|.
T Consensus       196 -~g~  198 (302)
T 1iz0_A          196 -VRG  198 (302)
T ss_dssp             -CSC
T ss_pred             -CCH
Confidence             886

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.75  E-value=2.4e-05  Score=69.90  Aligned_cols=72  Identities=15%  Similarity=0.151  Sum_probs=45.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH-HhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK-AIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vv   81 (263)
                      ++++++|||| |++|++++..|++.|++|+++.|+     .++.+.+....+..+  +  ++.|   +.+ ....+|++|
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~-----~~~a~~la~~~~~~~--~--~~~d---l~~~~~~~~DilV  429 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRT-----YERALELAEAIGGKA--L--SLTD---LDNYHPEDGMVLA  429 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESS-----HHHHHHHHHHTTC-C--E--ETTT---TTTC--CCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCce--e--eHHH---hhhccccCceEEE
Confidence            3578999998 799999999999999999999998     444443222112222  1  2222   122 123589999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      ||+|..
T Consensus       430 N~agvg  435 (523)
T 2o7s_A          430 NTTSMG  435 (523)
T ss_dssp             ECSSTT
T ss_pred             ECCCCC
Confidence            999864

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.71  E-value=2.3e-05  Score=66.59  Aligned_cols=99  Identities=17%  Similarity=0.265  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |++++|.|.||+|++|+.+++.|.+.. .+++.+.+..+.. .........+.+ .+   ..|+.-.+  ++.++++|++
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~~~-~v---~~dl~~~~--~~~~~~vDvV   86 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHLRA-QK---LPTLVSVK--DADFSTVDAV   86 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGGTT-SC---CCCCBCGG--GCCGGGCSEE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchhcC-cc---cccceecc--hhHhcCCCEE
Confidence            445689999999999999999999876 3777665542110 111111011111 11   12332222  3456789999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      |.++|..   .+...++.+ +.| ++.+-.|+
T Consensus        87 f~atp~~---~s~~~a~~~-~aG-~~VId~sa  113 (359)
T 1xyg_A           87 FCCLPHG---TTQEIIKEL-PTA-LKIVDLSA  113 (359)
T ss_dssp             EECCCTT---THHHHHHTS-CTT-CEEEECSS
T ss_pred             EEcCCch---hHHHHHHHH-hCC-CEEEECCc
Confidence            9999865   345667777 777 64333443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.71  E-value=3.2e-05  Score=63.13  Aligned_cols=73  Identities=21%  Similarity=0.291  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|+|+ |++|++++..|++.|++|+++.|+     .++.+.+ +.+.. ..+.  ..|+   +++.+  .++|+|
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~-----~~~a~~l~~~~~~~~~~~--~~~~---~~~~~--~~~Div  184 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYGNIQ--AVSM---DSIPL--QTYDLV  184 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGSCEE--EEEG---GGCCC--SCCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHccccCCeE--EeeH---HHhcc--CCCCEE
Confidence            4689999997 899999999999999999999999     5444432 22211 1222  2233   11110  389999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      ||+++...
T Consensus       185 In~t~~~~  192 (272)
T 1p77_A          185 INATSAGL  192 (272)
T ss_dssp             EECCCC--
T ss_pred             EECCCCCC
Confidence            99998764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.67  E-value=1.6e-05  Score=65.33  Aligned_cols=95  Identities=20%  Similarity=0.301  Sum_probs=58.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh---------ccC-Cc-----EEEEccCC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---------KKL-GV-----NLVIGDVL   65 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---------~~~-~~-----~~~~~D~~   65 (263)
                      ||+.++|.|.|+ |.+|+.++..|++.|++|++.+|+     +++.+.....         ... +.     ......+.
T Consensus         1 Mm~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~-----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~   74 (283)
T 4e12_A            1 MTGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDIN-----TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIR   74 (283)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeE
Confidence            778889999995 999999999999999999999998     4333321111         000 00     00000011


Q ss_pred             CHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHh
Q 044721           66 NHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        66 ~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      -..++.++++++|+||.+.... ......+++.+.+.
T Consensus        75 ~~~~~~~~~~~aDlVi~av~~~-~~~~~~v~~~l~~~  110 (283)
T 4e12_A           75 YSDDLAQAVKDADLVIEAVPES-LDLKRDIYTKLGEL  110 (283)
T ss_dssp             EESCHHHHTTTCSEEEECCCSC-HHHHHHHHHHHHHH
T ss_pred             EeCCHHHHhccCCEEEEeccCc-HHHHHHHHHHHHhh
Confidence            1134456778999999998754 22334455544443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.67  E-value=0.00015  Score=57.03  Aligned_cols=68  Identities=18%  Similarity=0.232  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+|.|+| +|.+|+.+++.|.+.|++|++.+|+     +++.+.+.   ..++...        ++.++++++|+||.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~-----~~~~~~~~---~~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRN-----PKRTARLF---PSAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS-----HHHHHHHS---BTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH---HcCCcee--------cHHHHHhCCCEEEEC
Confidence            46899999 7999999999999999999999998     44433221   2233321        345677899999999


Q ss_pred             CCCcc
Q 044721           84 VGHTL   88 (263)
Q Consensus        84 a~~~~   88 (263)
                      .....
T Consensus        91 v~~~~   95 (215)
T 2vns_A           91 VFREH   95 (215)
T ss_dssp             SCGGG
T ss_pred             CChHH
Confidence            88654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.66  E-value=0.00019  Score=61.08  Aligned_cols=75  Identities=24%  Similarity=0.281  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+.+++|+|+ |.+|..+++.+...|++|++++++     +++.+.+. .+   +... ..|..+.+.+.++..++|++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~~l---Ga~~-v~~~~~~~~~~~~~~~~D~vi  256 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTS-----PSKKEEALKNF---GADS-FLVSRDQEQMQAAAGTLDGII  256 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----GGGHHHHHHTS---CCSE-EEETTCHHHHHHTTTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhc---CCce-EEeccCHHHHHHhhCCCCEEE
Confidence            4678999996 999999999999999999999988     44444332 33   2222 347777777777777999999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      +++|..
T Consensus       257 d~~g~~  262 (366)
T 1yqd_A          257 DTVSAV  262 (366)
T ss_dssp             ECCSSC
T ss_pred             ECCCcH
Confidence            999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.65  E-value=9.1e-05  Score=62.99  Aligned_cols=75  Identities=25%  Similarity=0.300  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHh-cCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAI-KQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d   78 (263)
                      .+++++|+||+|.+|..+++.+...|++|++++++     +++.+.+..+   +... ..|..+.   +.+.+.. .++|
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~-~~~~~~~~~~~~~~~~~~~g~D  233 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS-----DEKSAFLKSL---GCDR-PINYKTEPVGTVLKQEYPEGVD  233 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHc---CCcE-EEecCChhHHHHHHHhcCCCCC
Confidence            36789999999999999999999999999999988     5555544443   2222 2344432   2233322 3699


Q ss_pred             EEEEcCCC
Q 044721           79 VVISTVGH   86 (263)
Q Consensus        79 ~vv~~a~~   86 (263)
                      ++|+++|.
T Consensus       234 ~vid~~g~  241 (362)
T 2c0c_A          234 VVYESVGG  241 (362)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCCH
Confidence            99999985

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.64  E-value=0.00013  Score=61.73  Aligned_cols=74  Identities=16%  Similarity=0.260  Sum_probs=53.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHh--cCcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAI--KQVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~--~~~d~   79 (263)
                      ++++|+||+|.+|...++.+...|++|++++++     +++.+.+..+.   ... ..|..+.   +.+.+..  .++|+
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~~G---a~~-~~~~~~~~~~~~v~~~~~~~g~D~  236 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR-----DEQIALLKDIG---AAH-VLNEKAPDFEATLREVMKAEQPRI  236 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESC-----GGGHHHHHHHT---CSE-EEETTSTTHHHHHHHHHHHHCCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcC---CCE-EEECCcHHHHHHHHHHhcCCCCcE
Confidence            689999999999999999999999999999988     55655555442   221 2344443   2333333  27999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|+++|..
T Consensus       237 vid~~g~~  244 (349)
T 3pi7_A          237 FLDAVTGP  244 (349)
T ss_dssp             EEESSCHH
T ss_pred             EEECCCCh
Confidence            99999854

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.63  E-value=7.8e-05  Score=63.47  Aligned_cols=75  Identities=19%  Similarity=0.307  Sum_probs=52.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC--HHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN--HESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vv   81 (263)
                      +++++|+|+ |.+|..+++.+...|++|++++++...  .++.+.+..+   ++..+  | .+  .+.+.+.-.++|++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~~~~---ga~~v--~-~~~~~~~~~~~~~~~d~vi  251 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEET---KTNYY--N-SSNGYDKLKDSVGKFDVII  251 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCC--HHHHHHHHHH---TCEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccc--hHHHHHHHHh---CCcee--c-hHHHHHHHHHhCCCCCEEE
Confidence            789999999 999999999999999999999988310  0455444443   33444  5 43  223333125799999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      +++|..
T Consensus       252 d~~g~~  257 (366)
T 2cdc_A          252 DATGAD  257 (366)
T ss_dssp             ECCCCC
T ss_pred             ECCCCh
Confidence            999864

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.62  E-value=3e-05  Score=63.28  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCCEEEE-EcCCCCCC-cchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVK-AGHPTFVL-VRESTLSA-PSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++++|+|+|++|.+|+.+++.+.+ .|++++.. +++++... ....+. ......++. +..      +++++++++|+
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~-~g~~~~~v~-~~~------dl~~~l~~~Dv   75 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL-AGAGKTGVT-VQS------SLDAVKDDFDV   75 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS-SSSSCCSCC-EES------CSTTTTTSCSE
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHH-cCCCcCCce-ecC------CHHHHhcCCCE
Confidence            457999999999999999999885 46777744 44432110 000000 000011111 112      23345567899


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCccee
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~  108 (263)
                      ||.++.+   .....+++.+.++| +..+
T Consensus        76 VIDft~p---~~~~~~~~~a~~~G-~~vV  100 (273)
T 1dih_A           76 FIDFTRP---EGTLNHLAFCRQHG-KGMV  100 (273)
T ss_dssp             EEECSCH---HHHHHHHHHHHHTT-CEEE
T ss_pred             EEEcCCh---HHHHHHHHHHHhCC-CCEE
Confidence            9977753   35567788888888 5543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.62  E-value=6.8e-05  Score=61.24  Aligned_cols=70  Identities=23%  Similarity=0.235  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++++|+|+ |++|++++..|.+.|+ +|+++.|+     .++.+.+.    .++...     ..+++.+.+.++|+||
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~-----~~~a~~la----~~~~~~-----~~~~~~~~~~~aDiVI  180 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRT-----MSRFNNWS----LNINKI-----NLSHAESHLDEFDIII  180 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSC-----GGGGTTCC----SCCEEE-----CHHHHHHTGGGCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHH----Hhcccc-----cHhhHHHHhcCCCEEE
Confidence            3679999996 9999999999999998 89999998     43332211    122221     3456677788999999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      |+.+..
T Consensus       181 naTp~G  186 (277)
T 3don_A          181 NTTPAG  186 (277)
T ss_dssp             ECCC--
T ss_pred             ECccCC
Confidence            997653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.61  E-value=0.00018  Score=59.48  Aligned_cols=37  Identities=30%  Similarity=0.390  Sum_probs=31.7

Q ss_pred             CCCe-EEEEc-CC-----------------ChhHHHHHHHHHHCCCCEEEEEcCCC
Q 044721            3 SKSK-ILFIG-GT-----------------GYIGKFIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         3 ~~~~-ilVtG-at-----------------G~iG~~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      .+++ ||||+ +|                 |..|.+++++++++|++|+++.+..+
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            3566 99994 47                 99999999999999999999998753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.59  E-value=0.00053  Score=57.28  Aligned_cols=91  Identities=21%  Similarity=0.260  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhh----hhhh---ccCCcEEEEccCCCHHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL----LDHF---KKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~---~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      ++++|.|+|+ |++|+.++..|+..|.  +|++++++     +++.+.    +.+.   ...++.+...|       .++
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~-----~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a   70 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVN-----KEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YED   70 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecc-----hHHHHHHHHHHHhccccccCCeEEEeCc-------HHH
Confidence            3679999996 9999999999999986  79999987     444331    1111   11234444333       246


Q ss_pred             hcCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcce
Q 044721           74 IKQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~  107 (263)
                      ++++|++|.++|....             ...+.+.+.+.+.. .+-
T Consensus        71 ~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a  116 (326)
T 3pqe_A           71 CKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG-FDG  116 (326)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCS
T ss_pred             hCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc-CCe
Confidence            8899999999987641             12355666666665 443

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.58  E-value=0.00012  Score=62.05  Aligned_cols=88  Identities=15%  Similarity=0.109  Sum_probs=54.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEE------ccCC-CHHHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI------GDVL-NHESLVKA   73 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~D~~-~~~~~~~~   73 (263)
                      ||++|+|.|.|+ |.+|+.++..|++.|++|++++|+     +++.+.+....  ...+..      ..+. ...+++++
T Consensus         1 mm~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   72 (359)
T 1bg6_A            1 MIESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDRG--AIIAEGPGLAGTAHPDLLTSDIGLA   72 (359)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHT--SEEEESSSCCEEECCSEEESCHHHH
T ss_pred             CCCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHhcC--CeEEeccccccccccceecCCHHHH
Confidence            777889999995 999999999999999999999988     44433222210  111100      0110 11234456


Q ss_pred             hcCcCEEEEcCCCccchhHHHHHHHH
Q 044721           74 IKQVDVVISTVGHTLLGDQVKIIAAI   99 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~~~~~~l~~~~   99 (263)
                      ++++|+||.+.....   ...+++.+
T Consensus        73 ~~~~D~vi~~v~~~~---~~~~~~~l   95 (359)
T 1bg6_A           73 VKDADVILIVVPAIH---HASIAANI   95 (359)
T ss_dssp             HTTCSEEEECSCGGG---HHHHHHHH
T ss_pred             HhcCCEEEEeCCchH---HHHHHHHH
Confidence            778999999987654   23444444

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.57  E-value=0.00015  Score=59.02  Aligned_cols=72  Identities=15%  Similarity=0.260  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+++++|+|+ |++|++++..|++.|. +|+++.|+     .++.+.+ +.+...++..+  ++.+..   .  .++|+|
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~--~~~~l~---~--~~~Div  185 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRD-----MAKALALRNELDHSRLRIS--RYEALE---G--QSFDIV  185 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHCCTTEEEE--CSGGGT---T--CCCSEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhccCCeeEe--eHHHhc---c--cCCCEE
Confidence            4689999996 8999999999999996 89999998     5554432 23321122322  332221   1  689999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      ||+.+..
T Consensus       186 InaTp~g  192 (272)
T 3pwz_A          186 VNATSAS  192 (272)
T ss_dssp             EECSSGG
T ss_pred             EECCCCC
Confidence            9997654

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.55  E-value=0.00033  Score=60.45  Aligned_cols=72  Identities=24%  Similarity=0.340  Sum_probs=55.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ||++++|+|.|+ |.+|+.+++.+.+.|++|++++ ++...  . .    .+ ......+..|+.|.+.+.++.+.+|++
T Consensus        21 mm~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p--~-~----~~-ad~~~~~~~~~~d~~~l~~~a~~~d~i   90 (403)
T 3k5i_A           21 MWNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSP--A-K----QI-SAHDGHVTGSFKEREAVRQLAKTCDVV   90 (403)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCT--T-G----GG-CCSSCCEESCTTCHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCc--H-H----Hh-ccccceeecCCCCHHHHHHHHHhCCEE
Confidence            667889999996 8999999999999999999998 63221  1 1    11 111245678999999999999999988


Q ss_pred             EE
Q 044721           81 IS   82 (263)
Q Consensus        81 v~   82 (263)
                      +.
T Consensus        91 ~~   92 (403)
T 3k5i_A           91 TA   92 (403)
T ss_dssp             EE
T ss_pred             EE
Confidence            75

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.54  E-value=0.00018  Score=60.86  Aligned_cols=95  Identities=21%  Similarity=0.224  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEE--cCCCCCCcchhhhhhhh-------ccCCcEEEEccCCCHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLV--RESTLSAPSKSQLLDHF-------KKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~--r~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~   70 (263)
                      ||++++|.|.||+|++|+.+++.|.+.. .+++.+.  ++...  .........+       ......+  .|+ |++. 
T Consensus         1 m~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~-   74 (350)
T 2ep5_A            1 MADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIG--KKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED-   74 (350)
T ss_dssp             -CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTT--SBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG-
T ss_pred             CCCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcC--CCHHHhcCcccccccccCCceeEE--eeC-CHHH-
Confidence            6677899999999999999999998764 4676664  22111  1000000000       0011112  233 3332 


Q ss_pred             HHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           71 VKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                         ++++|++|.+.+..   ....+++.+.+.| ++ +|
T Consensus        75 ---~~~vDvVf~atp~~---~s~~~a~~~~~aG-~~-VI  105 (350)
T 2ep5_A           75 ---HKDVDVVLSALPNE---LAESIELELVKNG-KI-VV  105 (350)
T ss_dssp             ---GTTCSEEEECCCHH---HHHHHHHHHHHTT-CE-EE
T ss_pred             ---hcCCCEEEECCChH---HHHHHHHHHHHCC-CE-EE
Confidence               36899999988754   4567888888888 66 44

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.53  E-value=0.00011  Score=60.14  Aligned_cols=71  Identities=18%  Similarity=0.205  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhcc-CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKK-LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .+++++|+|+ |++|++++..|++.|+ +|+++.|+     .++.+.+ +.+.. ..+...  ++.+      +..++|+
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~-----~~~a~~la~~~~~~~~~~~~--~~~~------l~~~aDi  190 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRT-----FAKAEQLAELVAAYGEVKAQ--AFEQ------LKQSYDV  190 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESS-----HHHHHHHHHHHGGGSCEEEE--EGGG------CCSCEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECC-----HHHHHHHHHHhhccCCeeEe--eHHH------hcCCCCE
Confidence            4789999996 8999999999999996 89999998     5444322 22211 123333  2221      1158999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      |||+.+..
T Consensus       191 IInaTp~g  198 (281)
T 3o8q_A          191 IINSTSAS  198 (281)
T ss_dssp             EEECSCCC
T ss_pred             EEEcCcCC
Confidence            99998765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.53  E-value=0.0002  Score=62.62  Aligned_cols=78  Identities=14%  Similarity=0.257  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEE--ccCCC--------------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI--GDVLN--------------   66 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~D~~~--------------   66 (263)
                      .+++++|+||+|.||...++.+...|++|++++++     +++.+.+..+. ....+-.  .|+.+              
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~-----~~~~~~~~~lG-a~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS-----AQKEAAVRALG-CDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTT-CCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhcC-CCEEEecccccccccccccccccchhhh
Confidence            36789999999999999999999999999999987     66666555542 2211111  12211              


Q ss_pred             --HHHHHHHhc-CcCEEEEcCCC
Q 044721           67 --HESLVKAIK-QVDVVISTVGH   86 (263)
Q Consensus        67 --~~~~~~~~~-~~d~vv~~a~~   86 (263)
                        .+.+.+... ++|++|+++|.
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHHhCCCceEEEECCCc
Confidence              233334333 69999999995

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.53  E-value=0.00049  Score=58.42  Aligned_cols=78  Identities=17%  Similarity=0.159  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH----Hhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK----AIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----~~~--   75 (263)
                      .+.++||+|+ |.+|...++.+...|++ |++++++     +++.+.+..+ ...+.....|-.+.+++.+    ...  
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDID-----EGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESC-----HHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCC
Confidence            4678999998 99999999999999987 8888888     6677766666 5455444455444444433    332  


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|.+.|..
T Consensus       252 g~Dvvid~~g~~  263 (363)
T 3m6i_A          252 EPAVALECTGVE  263 (363)
T ss_dssp             CCSEEEECSCCH
T ss_pred             CCCEEEECCCCh
Confidence            699999999854

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.48  E-value=0.0002  Score=60.23  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~d~   79 (263)
                      .+++++|+|+ |.+|..+++.+...|++|++++|+     +++.+.+..+   ++.. ..|..+.   +.+.+...++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~-~~d~~~~~~~~~~~~~~~~~d~  233 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAKEL---GADL-VVNPLKEDAAKFMKEKVGGVHA  233 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHT---TCSE-EECTTTSCHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHC---CCCE-EecCCCccHHHHHHHHhCCCCE
Confidence            4679999999 789999999999999999999988     5565544443   2222 2466543   234443468999


Q ss_pred             EEEcCCC
Q 044721           80 VISTVGH   86 (263)
Q Consensus        80 vv~~a~~   86 (263)
                      +|+++|.
T Consensus       234 vid~~g~  240 (339)
T 1rjw_A          234 AVVTAVS  240 (339)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999985

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.48  E-value=0.00079  Score=53.86  Aligned_cols=95  Identities=14%  Similarity=0.177  Sum_probs=60.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----CcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----QVD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d   78 (263)
                      ++|+|.|++|.+|+.+++.+.+. +++++........    ..    .+...++. +..|++.++...+.+.     +++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d----l~----~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~   71 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP----LS----LLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIH   71 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC----TH----HHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC----HH----HHhccCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence            48999999999999999999876 8888876654221    11    11111233 5578888776665442     789


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHh-CCcceeee
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEA-GNIKRFFP  110 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~-~~~~~~i~  110 (263)
                      +|+-..|... .....+.+++.+. + ++.++.
T Consensus        72 ~VigTTG~~~-e~~~~l~~aa~~~~~-~~vv~a  102 (245)
T 1p9l_A           72 AVVGTTGFTA-ERFQQVESWLVAKPN-TSVLIA  102 (245)
T ss_dssp             EEECCCCCCH-HHHHHHHHHHHTSTT-CEEEEC
T ss_pred             EEEcCCCCCH-HHHHHHHHHHHhCCC-CCEEEE
Confidence            9998887543 2223344444444 5 665554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.46  E-value=0.00032  Score=59.13  Aligned_cols=74  Identities=18%  Similarity=0.319  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhc--CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIK--QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~   79 (263)
                      .++++||+||+|.+|...++.+...|++|+++ ++     +++.+.+..+   +...+. +-.+ .+.+.+...  ++|+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~-----~~~~~~~~~l---Ga~~i~-~~~~~~~~~~~~~~~~g~D~  219 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR-----GSDLEYVRDL---GATPID-ASREPEDYAAEHTAGQGFDL  219 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC-----HHHHHHHHHH---TSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC-----HHHHHHHHHc---CCCEec-cCCCHHHHHHHHhcCCCceE
Confidence            36789999999999999999999999999988 66     5555554444   233322 2222 233444443  7999


Q ss_pred             EEEcCCC
Q 044721           80 VISTVGH   86 (263)
Q Consensus        80 vv~~a~~   86 (263)
                      +|+++|.
T Consensus       220 vid~~g~  226 (343)
T 3gaz_A          220 VYDTLGG  226 (343)
T ss_dssp             EEESSCT
T ss_pred             EEECCCc
Confidence            9999985

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.45  E-value=0.00051  Score=58.68  Aligned_cols=69  Identities=20%  Similarity=0.287  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++|+|.|+ |.+|+.+++.+.+.|++|++++.++...  . .    ..   .-..+..|+.|.+.+.++.+++|+|..
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p--~-~----~~---ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCP--C-R----YV---AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT--T-G----GG---SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh--h-h----hh---CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            4679999995 9999999999999999999998764321  0 0    11   124567899999999999989998855

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.45  E-value=0.0024  Score=54.45  Aligned_cols=87  Identities=23%  Similarity=0.344  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|++++.++...  . .    .+ .  -..+..|+.|.+.+.++..++|.++..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~--~-~----~~-~--~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSP--A-G----QV-A--DEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT--T-G----GG-S--SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--h-h----hh-C--ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            378999996 8999999999999999999888764321  0 0    11 1  134567999999998888899998875


Q ss_pred             CCCccchhHHHHHHHHHHhCCcc
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      .....    ..+++.+.+.+ ++
T Consensus        70 ~e~~~----~~~~~~l~~~g-i~   87 (380)
T 3ax6_A           70 LEHID----VQTLKKLYNEG-YK   87 (380)
T ss_dssp             CSCSC----HHHHHHHHHTT-CE
T ss_pred             ccCCC----HHHHHHHHHCC-Ce
Confidence            43221    23445555566 54

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.44  E-value=0.00076  Score=56.29  Aligned_cols=91  Identities=19%  Similarity=0.221  Sum_probs=59.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhh----hhhhc--cCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL----LDHFK--KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~~--~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      .+++|.|+|+ |++|+.++..|+..|.  ++++++++     +++.+-    +.+..  ...+.+...|       .+.+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~-----~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~   74 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF-----KDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDA   74 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC-----hHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHh
Confidence            4679999996 9999999999999886  79999987     443331    11110  1233444332       2468


Q ss_pred             cCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcce
Q 044721           75 KQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~  107 (263)
                      +++|++|.+||....             ...+.+.+.+.+.. .+-
T Consensus        75 ~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a  119 (326)
T 3vku_A           75 KDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNG  119 (326)
T ss_dssp             TTCSEEEECCCCC----------------CHHHHHHHHHTTT-CCS
T ss_pred             cCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-Cce
Confidence            899999999997641             11356666666665 443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.44  E-value=0.00045  Score=56.16  Aligned_cols=96  Identities=18%  Similarity=0.186  Sum_probs=58.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |+|++|.|+|++|.+|+.+++.+.+. +++++.. +|+.+..   ..+.+..+.+  ..  . ++.-.++++++++++|+
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~---~G~d~gel~g--~~--~-gv~v~~dl~~ll~~~DV   76 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQ---LGQDAGAFLG--KQ--T-GVALTDDIERVCAEADY   76 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTT---TTSBTTTTTT--CC--C-SCBCBCCHHHHHHHCSE
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccc---ccccHHHHhC--CC--C-CceecCCHHHHhcCCCE
Confidence            45689999999999999999999875 5676664 5553211   0000011100  00  0 12112344556668999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +|.+..+   ......++.+.+++ ++.++
T Consensus        77 VIDfT~p---~a~~~~~~~al~~G-~~vVi  102 (272)
T 4f3y_A           77 LIDFTLP---EGTLVHLDAALRHD-VKLVI  102 (272)
T ss_dssp             EEECSCH---HHHHHHHHHHHHHT-CEEEE
T ss_pred             EEEcCCH---HHHHHHHHHHHHcC-CCEEE
Confidence            9998753   35567788888888 65443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.43  E-value=0.00019  Score=58.94  Aligned_cols=78  Identities=18%  Similarity=0.260  Sum_probs=53.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+|.|.|+||.+|+.+++.|.+.|++|++.+|+     +++.+.+...   ++     +..+   ..++++++|+||.+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~---g~-----~~~~---~~~~~~~aDvVi~a   74 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA-----PEGRDRLQGM---GI-----PLTD---GDGWIDEADVVVLA   74 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS-----HHHHHHHHHT---TC-----CCCC---SSGGGGTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHhc---CC-----CcCC---HHHHhcCCCEEEEc
Confidence            3699999988999999999999999999999888     4444333221   22     1122   23456789999998


Q ss_pred             CCCccchhHHHHHHHHH
Q 044721           84 VGHTLLGDQVKIIAAIK  100 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~  100 (263)
                      .....   ...+++.+.
T Consensus        75 v~~~~---~~~v~~~l~   88 (286)
T 3c24_A           75 LPDNI---IEKVAEDIV   88 (286)
T ss_dssp             SCHHH---HHHHHHHHG
T ss_pred             CCchH---HHHHHHHHH
Confidence            87543   344554443

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.42  E-value=0.00013  Score=60.23  Aligned_cols=36  Identities=17%  Similarity=0.128  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      +.++|.|.| .|.+|+.+++.|++.|++|++.+|+++
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~   49 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIE   49 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            356899999 699999999999999999999999843

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.41  E-value=0.00038  Score=58.50  Aligned_cols=92  Identities=21%  Similarity=0.294  Sum_probs=56.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC---CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++++|.|.||||++|+.+++.|.+++   .+++.+....+   ..+.  +. +.+..+.+  .|. +++    .++++|+
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~---~G~~--~~-~~~~~i~~--~~~-~~~----~~~~vDv   68 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS---EGKT--YR-FNGKTVRV--QNV-EEF----DWSQVHI   68 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT---TTCE--EE-ETTEEEEE--EEG-GGC----CGGGCSE
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC---CCCc--ee-ecCceeEE--ecC-ChH----HhcCCCE
Confidence            45799999999999999999999874   45666553211   1010  00 11111222  222 121    3468999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      +|.+.|..   .....++.+.+.| ++.+-.|
T Consensus        69 Vf~a~g~~---~s~~~a~~~~~~G-~~vId~s   96 (336)
T 2r00_A           69 ALFSAGGE---LSAKWAPIAAEAG-VVVIDNT   96 (336)
T ss_dssp             EEECSCHH---HHHHHHHHHHHTT-CEEEECS
T ss_pred             EEECCCch---HHHHHHHHHHHcC-CEEEEcC
Confidence            99998854   4567778888888 7544444

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.41  E-value=0.001  Score=55.46  Aligned_cols=96  Identities=21%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhh---ccCCcEEE-EccCCCHHHHHHHhcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHF---KKLGVNLV-IGDVLNHESLVKAIKQ   76 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~-~~D~~~~~~~~~~~~~   76 (263)
                      |++++|.|+|+ |.+|..++..|+..|+ +|++++++..... .....+.+.   ......+. ..|.       +++++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~-g~~~dl~~~~~~~~~~~~v~~t~d~-------~a~~~   75 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQ-GKGLDIAESSPVDGFDAKFTGANDY-------AAIEG   75 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHH-HHHHHHHHHHHHHTCCCCEEEESSG-------GGGTT
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHH-HHHHHHhchhhhcCCCCEEEEeCCH-------HHHCC
Confidence            45679999997 9999999999999998 9999999843210 000011111   11122222 2232       47889


Q ss_pred             cCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcce
Q 044721           77 VDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        77 ~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~  107 (263)
                      +|+||.++|...-             ...+.+.+.+.+.. .+-
T Consensus        76 aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a  118 (324)
T 3gvi_A           76 ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEA  118 (324)
T ss_dssp             CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTC
T ss_pred             CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCe
Confidence            9999999987641             12355666666665 443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.40  E-value=0.00018  Score=56.66  Aligned_cols=71  Identities=27%  Similarity=0.302  Sum_probs=48.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEE-EEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFV-LVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |++|+|.|.| +|.+|+.+++.|++.|++|++ .+|+     +++.+.+....  +.....   .+.    +.++++|+|
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~-----~~~~~~l~~~~--g~~~~~---~~~----~~~~~aDvV   85 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRG-----PASLSSVTDRF--GASVKA---VEL----KDALQADVV   85 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTC-----GGGGHHHHHHH--TTTEEE---CCH----HHHTTSSEE
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCC-----HHHHHHHHHHh--CCCccc---ChH----HHHhcCCEE
Confidence            4567999999 699999999999999999998 7787     44443222111  111111   122    336789999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      |.+....
T Consensus        86 ilavp~~   92 (220)
T 4huj_A           86 ILAVPYD   92 (220)
T ss_dssp             EEESCGG
T ss_pred             EEeCChH
Confidence            9988643

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.40  E-value=0.0015  Score=54.39  Aligned_cols=91  Identities=19%  Similarity=0.196  Sum_probs=60.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhh----hhhhh---ccCCcEEE-EccCCCHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ----LLDHF---KKLGVNLV-IGDVLNHESLVK   72 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~----~~~~~---~~~~~~~~-~~D~~~~~~~~~   72 (263)
                      |++++|.|+|+ |.+|+.++..|+..|. +|++++++.     ++.+    .+++.   ......+. ..|       .+
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~-----~~~~g~a~dL~~~~~~~~~~~~v~~t~d-------~~   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQ-----GMPNGKALDLLQTCPIEGVDFKVRGTND-------YK   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHTTHHHHTCCCCEEEESC-------GG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCh-----HHHHHHHHHHHhhhhhcCCCcEEEEcCC-------HH
Confidence            55689999995 9999999999999887 899999884     3322    11111   11122332 122       24


Q ss_pred             HhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcc
Q 044721           73 AIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~  106 (263)
                      +++++|++|.++|...-             ...+.+.+.+.+.. .+
T Consensus        70 a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~  115 (321)
T 3p7m_A           70 DLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PN  115 (321)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TT
T ss_pred             HHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CC
Confidence            78899999999987641             12355666666665 44

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.38  E-value=0.00086  Score=58.46  Aligned_cols=90  Identities=16%  Similarity=0.301  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-C---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccC--CCH-HHHHHHhcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-H---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV--LNH-ESLVKAIKQ   76 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~~~~   76 (263)
                      .++|+|.| .|+||+.+++.|++.. +   .|++.+.....     .+..+..   ++.+...++  .|. +.+.+++++
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-----~~~~~~~---g~~~~~~~Vdadnv~~~l~aLl~~   83 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-----VDVAQQY---GVSFKLQQITPQNYLEVIGSTLEE   83 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-----CCHHHHH---TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh-----hhHHhhc---CCceeEEeccchhHHHHHHHHhcC
Confidence            36799999 6999999999999864 4   68888766322     1111222   344555555  444 335667877


Q ss_pred             cCEEEEcCCCccchhHHHHHHHHHHhCCcc
Q 044721           77 VDVVISTVGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      .|+|||++-..   ....++++|.+.| +.
T Consensus        84 ~DvVIN~s~~~---~~l~Im~acleaG-v~  109 (480)
T 2ph5_A           84 NDFLIDVSIGI---SSLALIILCNQKG-AL  109 (480)
T ss_dssp             TCEEEECCSSS---CHHHHHHHHHHHT-CE
T ss_pred             CCEEEECCccc---cCHHHHHHHHHcC-CC
Confidence            79999866443   4567899999998 54

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.38  E-value=0.00099  Score=55.84  Aligned_cols=100  Identities=21%  Similarity=0.178  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCC-C-CCCcchhhhhhhhccC-CcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRES-T-LSAPSKSQLLDHFKKL-GVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~-~-~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |++|.|.||||++|+.+++.|.+. .+++..+.++. + ...+...+....+.+. +..+...  .+.+   ++++++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence            579999999999999999999985 46777665442 1 1101111111112111 2222221  0222   23378999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +|.+.+..   ....+++.+.+.| ++.+-.|+
T Consensus        79 vf~a~p~~---~s~~~~~~~~~~g-~~vIDlSa  107 (337)
T 3dr3_A           79 VFLATAHE---VSHDLAPQFLEAG-CVVFDLSG  107 (337)
T ss_dssp             EEECSCHH---HHHHHHHHHHHTT-CEEEECSS
T ss_pred             EEECCChH---HHHHHHHHHHHCC-CEEEEcCC
Confidence            99998754   4566777778888 66554543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.38  E-value=0.0011  Score=55.12  Aligned_cols=74  Identities=16%  Similarity=0.272  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhh-h---hh---hccCCcEEEEccCCCHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQL-L---DH---FKKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~---~~---~~~~~~~~~~~D~~~~~~~~~   72 (263)
                      |++++|.|+|+ |.+|..++..|+..|  .+|++++++     +++.+. .   .+   +....+.+.. |  +    .+
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~   70 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLD-----TEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YS   70 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSC-----HHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----hhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HH
Confidence            45679999998 999999999999888  478888887     333221 1   11   1112333332 2  2    45


Q ss_pred             HhcCcCEEEEcCCCcc
Q 044721           73 AIKQVDVVISTVGHTL   88 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~   88 (263)
                      +++++|+||.++|...
T Consensus        71 a~~~aDvVvi~ag~~~   86 (317)
T 3d0o_A           71 DCHDADLVVICAGAAQ   86 (317)
T ss_dssp             GGTTCSEEEECCCCCC
T ss_pred             HhCCCCEEEECCCCCC
Confidence            6889999999998774

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.00046  Score=58.76  Aligned_cols=75  Identities=15%  Similarity=0.256  Sum_probs=56.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+.++||+|+ |.+|...++.+...|++|++++++     +++.+.+..+.   +.. ..|..+.+.++++..++|++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~-----~~~~~~a~~lG---a~~-vi~~~~~~~~~~~~~g~Dvvid  263 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTS-----EAKREAAKALG---ADE-VVNSRNADEMAAHLKSFDFILN  263 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHT---CSE-EEETTCHHHHHTTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcC---CcE-EeccccHHHHHHhhcCCCEEEE
Confidence            3678999997 889999999988899999999988     55555544442   222 2466666655555578999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      ++|..
T Consensus       264 ~~g~~  268 (369)
T 1uuf_A          264 TVAAP  268 (369)
T ss_dssp             CCSSC
T ss_pred             CCCCH
Confidence            99864

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.36  E-value=0.00078  Score=55.27  Aligned_cols=101  Identities=20%  Similarity=0.234  Sum_probs=67.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC-------------CCcchhhh----hhhhccCC--cEEEEcc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL-------------SAPSKSQL----LDHFKKLG--VNLVIGD   63 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------~~~~~~~~----~~~~~~~~--~~~~~~D   63 (263)
                      ..+|+|.|+ |++|+.+++.|++.|. ++++++++.-.             ....|.+.    +..+ .+.  ++.+..+
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~~~  113 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHNYN  113 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-CTTSEEEEECCC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEeccc
Confidence            468999995 9999999999999995 78888876411             00123221    1222 233  4556667


Q ss_pred             CCCHHHHHHHh-----------cCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           64 VLNHESLVKAI-----------KQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        64 ~~~~~~~~~~~-----------~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++.+.+++++           +++|+||.+.-..  .....+-+++.+.+ ++.+.
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~--~~R~~in~~c~~~~-~Pli~  167 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF--EARMTINTACNELG-QTWME  167 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH--HHHHHHHHHHHHHT-CCEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCcch--hhhhHHHHHHHHhC-CCEEE
Confidence            77766676665           6899999886543  33455667788888 77664

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.36  E-value=0.00061  Score=58.12  Aligned_cols=75  Identities=17%  Similarity=0.318  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh--cCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI--KQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~v   80 (263)
                      .+.+++|+||+|.+|...++.+...|++|++++ +     +++.+.+..+   +... ..|..+.+..+++.  .++|++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~-----~~~~~~~~~l---Ga~~-v~~~~~~~~~~~~~~~~g~D~v  252 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-S-----QDASELVRKL---GADD-VIDYKSGSVEEQLKSLKPFDFI  252 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-C-----GGGHHHHHHT---TCSE-EEETTSSCHHHHHHTSCCBSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-C-----hHHHHHHHHc---CCCE-EEECCchHHHHHHhhcCCCCEE
Confidence            357899999999999999999999999998877 4     2334433433   2222 23555433233332  479999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      |+++|..
T Consensus       253 id~~g~~  259 (375)
T 2vn8_A          253 LDNVGGS  259 (375)
T ss_dssp             EESSCTT
T ss_pred             EECCCCh
Confidence            9999864

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.34  E-value=0.00015  Score=60.04  Aligned_cols=33  Identities=18%  Similarity=0.201  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +|+|.|.|+ |.+|+.++..|++.|++|++++|+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~   35 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQW   35 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECC
Confidence            478999995 999999999999999999999998

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.34  E-value=0.00045  Score=58.53  Aligned_cols=97  Identities=13%  Similarity=0.134  Sum_probs=56.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcC-CCCCCcchhhhhhh-----hc--cCCcEEEEccCCCHHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRE-STLSAPSKSQLLDH-----FK--KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~~~~~~~~~~-----~~--~~~~~~~~~D~~~~~~~~~~   73 (263)
                      ++.+|.|.||||++|+.+.+.|.+.. .++..+..+ ...  ....+....     +.  ..+..+...   +++    .
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saG--k~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~   76 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVG--KPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----L   76 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTT--SBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----G
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcC--CChhHhcccccccccccccccceEEeC---CHH----H
Confidence            45689999999999999999887754 356555433 211  111100000     00  001111111   222    2


Q ss_pred             hcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           74 IKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ++++|++|.+.+...   ...+.+.+.+.| ++.+-.|+
T Consensus        77 ~~~vDvvf~a~p~~~---s~~~a~~~~~~G-~~vIDlSa  111 (359)
T 4dpl_A           77 MDDVDIIFSPLPQGA---AGPVEEQFAKEG-FPVISNSP  111 (359)
T ss_dssp             CTTCCEEEECCCTTT---HHHHHHHHHHTT-CEEEECSS
T ss_pred             hcCCCEEEECCChHH---HHHHHHHHHHCC-CEEEEcCC
Confidence            468999999988653   456777777888 76665554

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.34  E-value=0.00045  Score=58.53  Aligned_cols=97  Identities=13%  Similarity=0.134  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcC-CCCCCcchhhhhhh-----hc--cCCcEEEEccCCCHHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRE-STLSAPSKSQLLDH-----FK--KLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~~~~~~~~~~-----~~--~~~~~~~~~D~~~~~~~~~~   73 (263)
                      ++.+|.|.||||++|+.+.+.|.+.. .++..+..+ ...  ....+....     +.  ..+..+...   +++    .
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saG--k~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~   76 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVG--KPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----L   76 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTT--SBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----G
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcC--CChhHhcccccccccccccccceEEeC---CHH----H
Confidence            45689999999999999999887754 356555433 211  111100000     00  001111111   222    2


Q ss_pred             hcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           74 IKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ++++|++|.+.+...   ...+.+.+.+.| ++.+-.|+
T Consensus        77 ~~~vDvvf~a~p~~~---s~~~a~~~~~~G-~~vIDlSa  111 (359)
T 4dpk_A           77 MDDVDIIFSPLPQGA---AGPVEEQFAKEG-FPVISNSP  111 (359)
T ss_dssp             CTTCCEEEECCCTTT---HHHHHHHHHHTT-CEEEECSS
T ss_pred             hcCCCEEEECCChHH---HHHHHHHHHHCC-CEEEEcCC
Confidence            468999999988653   456777777888 76665554

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.34  E-value=0.00092  Score=56.77  Aligned_cols=90  Identities=16%  Similarity=0.327  Sum_probs=56.4

Q ss_pred             CeEEEEcCCChhHHHHHHH-HHHCCC---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEA-SVKAGH---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|.|.||+|++|+.+++. |.++++   .++.+..++...   ..   ..+.+.  .....|..+++.    ++++|++
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~---~v---~~~~g~--~i~~~~~~~~~~----~~~~DvV   69 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ---AA---PSFGGT--TGTLQDAFDLEA----LKALDII   69 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS---BC---CGGGTC--CCBCEETTCHHH----HHTCSEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC---Cc---cccCCC--ceEEEecCChHH----hcCCCEE
Confidence            6899999999999999994 554543   345554442211   11   111111  222334545544    4589999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      |.+.|..   ....+++...+.| ++.+++
T Consensus        70 f~a~g~~---~s~~~a~~~~~~G-~k~vVI   95 (367)
T 1t4b_A           70 VTCQGGD---YTNEIYPKLRESG-WQGYWI   95 (367)
T ss_dssp             EECSCHH---HHHHHHHHHHHTT-CCCEEE
T ss_pred             EECCCch---hHHHHHHHHHHCC-CCEEEE
Confidence            9998853   4567788888888 875554

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.33  E-value=0.00064  Score=57.33  Aligned_cols=75  Identities=15%  Similarity=0.195  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC--HHHHHHHh-cCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN--HESLVKAI-KQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-~~~d~   79 (263)
                      .+.+++|+||+|.+|...++.+...|++|++++++     +++.+.+..+.   ...+ .|..+  .+.+.+.- .++|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~lG---a~~v-i~~~~~~~~~~~~~~~~g~Dv  220 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR-----NETIEWTKKMG---ADIV-LNHKESLLNQFKTQGIELVDY  220 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS-----HHHHHHHHHHT---CSEE-ECTTSCHHHHHHHHTCCCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhcC---CcEE-EECCccHHHHHHHhCCCCccE
Confidence            46799999999999999999999999999999987     55665555542   2221 23332  23344432 26999


Q ss_pred             EEEcCCC
Q 044721           80 VISTVGH   86 (263)
Q Consensus        80 vv~~a~~   86 (263)
                      +|+++|.
T Consensus       221 v~d~~g~  227 (346)
T 3fbg_A          221 VFCTFNT  227 (346)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999985

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.33  E-value=0.00067  Score=57.45  Aligned_cols=94  Identities=16%  Similarity=0.166  Sum_probs=55.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhh-------ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHF-------KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ++|.|.||+|++|+.+++.|.+.+ .+|+.+.++..............+       ......+...   +++   ++++ 
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~   82 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPK---HEEFE   82 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTT---SGGGT
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHH---HHhcC
Confidence            689999999999999999998765 577777654221101111000000       0001111111   222   2345 


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|+||.+.+..   ....+++.+.+.| ++ +|
T Consensus        83 ~~DvV~~atp~~---~~~~~a~~~~~aG-~~-VI  111 (354)
T 1ys4_A           83 DVDIVFSALPSD---LAKKFEPEFAKEG-KL-IF  111 (354)
T ss_dssp             TCCEEEECCCHH---HHHHHHHHHHHTT-CE-EE
T ss_pred             CCCEEEECCCch---HHHHHHHHHHHCC-CE-EE
Confidence            899999998754   4556777777888 65 55

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.31  E-value=0.00054  Score=60.09  Aligned_cols=75  Identities=16%  Similarity=0.348  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-------------H--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-------------H--   67 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~--   67 (263)
                      .+.+|+|+|++|.+|...++.+...|++|++++++     +++.+.+..+.   +..+ .|..+             .  
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~-----~~~~~~~~~lG---a~~v-i~~~~~d~~~~~~~~~~~~~~  298 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSS-----PQKAEICRAMG---AEAI-IDRNAEGYRFWKDENTQDPKE  298 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHT---CCEE-EETTTTTCCSEEETTEECHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC-----HHHHHHHHhhC---CcEE-EecCcCcccccccccccchHH
Confidence            35789999999999999999999999999999987     66666555552   2211 23222             1  


Q ss_pred             -----HHHHHHhc--CcCEEEEcCCC
Q 044721           68 -----ESLVKAIK--QVDVVISTVGH   86 (263)
Q Consensus        68 -----~~~~~~~~--~~d~vv~~a~~   86 (263)
                           +.+.++..  ++|++|.++|.
T Consensus       299 ~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          299 WKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence                 34444443  79999999985

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.31  E-value=0.00066  Score=57.49  Aligned_cols=75  Identities=19%  Similarity=0.154  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh-hhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+.+++|+|+ |.+|...++.+...|++|++++++     +++.+.+. .+   +... ..|..+.+.+.++..++|++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~-----~~~~~~~~~~l---Ga~~-vi~~~~~~~~~~~~~g~D~vi  249 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSS-----NKKREEALQDL---GADD-YVIGSDQAKMSELADSLDYVI  249 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS-----TTHHHHHHTTS---CCSC-EEETTCHHHHHHSTTTEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCC-----hHHHHHHHHHc---CCce-eeccccHHHHHHhcCCCCEEE
Confidence            4678999995 999999999988899999999988     44444333 33   1221 235666666777667899999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .++|..
T Consensus       250 d~~g~~  255 (357)
T 2cf5_A          250 DTVPVH  255 (357)
T ss_dssp             ECCCSC
T ss_pred             ECCCCh
Confidence            999864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.30  E-value=0.0011  Score=56.06  Aligned_cols=75  Identities=23%  Similarity=0.286  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC----HHHHHHHh----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN----HESLVKAI----   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~----   74 (263)
                      .+.+++|+|+ |.+|...++.+...|++|++++++     +++.+.+..+.   +.. ..|..+    .+.+.+..    
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~lG---a~~-~~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARS-----PRRLEVAKNCG---ADV-TLVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT---CSE-EEECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHhC---CCE-EEcCcccccHHHHHHHHhcccc
Confidence            4678999996 999999999988899999888888     66665555442   221 234432    34555554    


Q ss_pred             -cCcCEEEEcCCCc
Q 044721           75 -KQVDVVISTVGHT   87 (263)
Q Consensus        75 -~~~d~vv~~a~~~   87 (263)
                       .++|++|+++|..
T Consensus       238 g~g~D~vid~~g~~  251 (352)
T 1e3j_A          238 GDLPNVTIDCSGNE  251 (352)
T ss_dssp             SSCCSEEEECSCCH
T ss_pred             CCCCCEEEECCCCH
Confidence             3799999999853

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.30  E-value=0.00099  Score=56.44  Aligned_cols=91  Identities=19%  Similarity=0.278  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCC---EEEEEc-CCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHP---TFVLVR-ESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +++|.|.||||++|+.+++.|.++++.   +..+.. +...   .+.   . +.+  .....-++. ++    .++++|+
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG---~~~---~-~~~--~~~~~~~~~-~~----~~~~~Dv   67 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG---KSL---K-FKD--QDITIEETT-ET----AFEGVDI   67 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTT---CEE---E-ETT--EEEEEEECC-TT----TTTTCSE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCC---Ccc---e-ecC--CCceEeeCC-HH----HhcCCCE
Confidence            468999999999999999999987653   343332 2111   011   0 111  122222222 11    3578999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +|.++|..   ....+++...+.| ++.+-.|+
T Consensus        68 vf~a~~~~---~s~~~a~~~~~~G-~~vIDlSa   96 (366)
T 3pwk_A           68 ALFSAGSS---TSAKYAPYAVKAG-VVVVDNTS   96 (366)
T ss_dssp             EEECSCHH---HHHHHHHHHHHTT-CEEEECSS
T ss_pred             EEECCChH---hHHHHHHHHHHCC-CEEEEcCC
Confidence            99999743   4566777778888 65443454

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.30  E-value=0.00086  Score=55.40  Aligned_cols=71  Identities=20%  Similarity=0.293  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|+ |.+|+.+++.|...|++|++.+|+     .++.+.+..+   ++..+     +..+++++++++|+|+.
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~-----~~~~~~~~~~---g~~~~-----~~~~l~~~l~~aDvVi~  221 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARS-----SAHLARITEM---GLVPF-----HTDELKEHVKDIDICIN  221 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCEEE-----EGGGHHHHSTTCSEEEE
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHC---CCeEE-----chhhHHHHhhCCCEEEE
Confidence            4789999995 999999999999999999999998     4433322221   23322     12457788899999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       222 ~~p~~  226 (300)
T 2rir_A          222 TIPSM  226 (300)
T ss_dssp             CCSSC
T ss_pred             CCChh
Confidence            98864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.30  E-value=0.00031  Score=59.62  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-HHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-ESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vv   81 (263)
                      .+.++||+|+ |.+|...++.+...|++|++++++     +++.+.+..+.   +.. ..|..+. +..+++..++|++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~-----~~~~~~~~~lG---a~~-v~~~~~~~~~~~~~~~~~D~vi  248 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRS-----SRKREDAMKMG---ADH-YIATLEEGDWGEKYFDTFDLIV  248 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHHT---CSE-EEEGGGTSCHHHHSCSCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHcC---CCE-EEcCcCchHHHHHhhcCCCEEE
Confidence            3679999999 999999999988899999999988     44555444442   222 1344443 33333335899999


Q ss_pred             EcCCC
Q 044721           82 STVGH   86 (263)
Q Consensus        82 ~~a~~   86 (263)
                      .++|.
T Consensus       249 d~~g~  253 (360)
T 1piw_A          249 VCASS  253 (360)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            99986

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.30  E-value=0.0004  Score=59.90  Aligned_cols=72  Identities=24%  Similarity=0.396  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchh-hhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKS-QLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+++++|.|+ |.+|+.+++.|...|+ +|++++|+     .++. +....+   +...  .++   +++.+.+.++|+|
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~-----~~ra~~la~~~---g~~~--~~~---~~l~~~l~~aDvV  231 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELARDL---GGEA--VRF---DELVDHLARSDVV  231 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHHHH---TCEE--CCG---GGHHHHHHTCSEE
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHc---CCce--ecH---HhHHHHhcCCCEE
Confidence            5789999997 9999999999999998 89999988     5444 222333   2222  222   3566777899999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |.+.+...
T Consensus       232 i~at~~~~  239 (404)
T 1gpj_A          232 VSATAAPH  239 (404)
T ss_dssp             EECCSSSS
T ss_pred             EEccCCCC
Confidence            99988654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.30  E-value=0.00051  Score=57.94  Aligned_cols=74  Identities=18%  Similarity=0.314  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~   76 (263)
                      .+.+++|+|+ |.+|..+++.+...|+ +|++++|+     +++.+.+..+.   +.. ..|..+.   +.+.++..  +
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~-----~~~~~~~~~~G---a~~-~~~~~~~~~~~~v~~~~~g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS-----DFRRELAKKVG---ADY-VINPFEEDVVKEVMDITDGNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC-----HHHHHHHHHHT---CSE-EECTTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHhC---CCE-EECCCCcCHHHHHHHHcCCCC
Confidence            3578999999 9999999999999999 99999988     55655544442   222 2355442   23444433  6


Q ss_pred             cCEEEEcCCC
Q 044721           77 VDVVISTVGH   86 (263)
Q Consensus        77 ~d~vv~~a~~   86 (263)
                      +|++|+++|.
T Consensus       237 ~D~vid~~g~  246 (348)
T 2d8a_A          237 VDVFLEFSGA  246 (348)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.29  E-value=0.00089  Score=55.11  Aligned_cols=71  Identities=18%  Similarity=0.286  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.| .|.||+.+++.|...|++|++.+|+     .++.+.+..   .++..+     +.++++++++++|+|+.
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~~---~g~~~~-----~~~~l~~~l~~aDvVi~  219 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARE-----SDLLARIAE---MGMEPF-----HISKAAQELRDVDVCIN  219 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH---TTSEEE-----EGGGHHHHTTTCSEEEE
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHH---CCCeec-----ChhhHHHHhcCCCEEEE
Confidence            578999999 5999999999999999999999988     433322222   233332     23456778899999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       220 ~~p~~  224 (293)
T 3d4o_A          220 TIPAL  224 (293)
T ss_dssp             CCSSC
T ss_pred             CCChH
Confidence            98753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.28  E-value=0.0025  Score=55.95  Aligned_cols=96  Identities=22%  Similarity=0.303  Sum_probs=71.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIS   82 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~   82 (263)
                      .++++|.|| |.+|..+++.|. ++++|.++.++     +++.+.+.... ++..++.+|-+|++-+++. +..+|+++.
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d-----~~r~~~la~~l-~~~~Vi~GD~td~~~L~ee~i~~~D~~ia  306 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERN-----LQRAEKLSEEL-ENTIVFCGDAADQELLTEENIDQVDVFIA  306 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESC-----HHHHHHHHHHC-TTSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             ccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecC-----HHHHHHHHHHC-CCceEEeccccchhhHhhcCchhhcEEEE
Confidence            367999996 999999999985 45899999988     65655443332 4688999999999988764 778999999


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ..+...  ...-..-.+++.| +++++.
T Consensus       307 ~T~~De--~Ni~~~llAk~~g-v~kvIa  331 (461)
T 4g65_A          307 LTNEDE--TNIMSAMLAKRMG-AKKVMV  331 (461)
T ss_dssp             CCSCHH--HHHHHHHHHHHTT-CSEEEE
T ss_pred             cccCcH--HHHHHHHHHHHcC-Cccccc
Confidence            887642  1222233567778 888873

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.28  E-value=8.6e-05  Score=62.09  Aligned_cols=74  Identities=24%  Similarity=0.307  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhh----hhhh---ccCCcEEEE-ccCCCHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQL----LDHF---KKLGVNLVI-GDVLNHESLV   71 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~----~~~~---~~~~~~~~~-~D~~~~~~~~   71 (263)
                      |+.+++|.|+|+ |.+|..++..|+..|+ +|++.+++.     ++.+.    +...   ......+.. .|      . 
T Consensus         1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~-----~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-   67 (322)
T 1t2d_A            1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK-----NMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-   67 (322)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHTHHHHHTCCCCEEEECC------G-
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHHHHHhhhhhcCCCcEEEECCC------H-
Confidence            666789999998 9999999999999997 888888883     33221    1111   011222221 22      2 


Q ss_pred             HHhcCcCEEEEcCCCc
Q 044721           72 KAIKQVDVVISTVGHT   87 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~   87 (263)
                      ++++++|+||.++|..
T Consensus        68 ~al~~aD~Vi~a~g~p   83 (322)
T 1t2d_A           68 DDLAGADVVIVTAGFT   83 (322)
T ss_dssp             GGGTTCSEEEECCSCS
T ss_pred             HHhCCCCEEEEeCCCC
Confidence            4688999999999765

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.28  E-value=0.00077  Score=54.20  Aligned_cols=103  Identities=20%  Similarity=0.213  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC------C--------Ccchhhhh-hhhc--cCCcE--EEEcc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL------S--------APSKSQLL-DHFK--KLGVN--LVIGD   63 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------~--------~~~~~~~~-~~~~--~~~~~--~~~~D   63 (263)
                      .++|+|.|+ |++|+.+++.|+..|. ++++++++.-.      .        ...|.+.+ +.+.  .+.+.  .+..+
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  106 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR  106 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            468999996 8899999999999996 68887765311      0        01222211 1111  23443  33334


Q ss_pred             CCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           64 VLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        64 ~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      + +.+.+.++++++|+||.+....  .....+-+.+.+.+ ++.+..+
T Consensus       107 ~-~~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~-~p~i~~~  150 (251)
T 1zud_1          107 L-TGEALKDAVARADVVLDCTDNM--ATRQEINAACVALN-TPLITAS  150 (251)
T ss_dssp             C-CHHHHHHHHHHCSEEEECCSSH--HHHHHHHHHHHHTT-CCEEEEE
T ss_pred             C-CHHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHhC-CCEEEEe
Confidence            4 4466778888999999987633  34445666777777 7765533

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.28  E-value=0.00034  Score=58.13  Aligned_cols=35  Identities=26%  Similarity=0.348  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|+|.|.| .|.+|+.+++.|++.|++|++.+|++
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~   54 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTL   54 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            468999999 69999999999999999999999983

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.27  E-value=0.00062  Score=57.85  Aligned_cols=75  Identities=20%  Similarity=0.250  Sum_probs=54.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccC------------------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV------------------   64 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------   64 (263)
                      .+.+++|+|+ |.+|..+++.+...|++|++++|+     +.+.+.+..+   +..++..|.                  
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~l---Ga~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVR-----PEVAEQVRSV---GAQWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS-----GGGHHHHHHT---TCEECCCC-------------CHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCeEEeccccccccccchhhhhHHHHh
Confidence            3578999996 999999999999999999999999     5555444433   233332221                  


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCC
Q 044721           65 LNHESLVKAIKQVDVVISTVGH   86 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~   86 (263)
                      .+.+.+.+.++++|+||.++..
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhHHHHHHHHhcCCEEEECCCC
Confidence            1245678888999999998744

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.27  E-value=0.0018  Score=53.71  Aligned_cols=91  Identities=15%  Similarity=0.122  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhh-hhhhcc------CCcEEEE-ccCCCHHHHHHHhc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQL-LDHFKK------LGVNLVI-GDVLNHESLVKAIK   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~------~~~~~~~-~D~~~~~~~~~~~~   75 (263)
                      ++|.|+|+ |.+|+.++..|+..|+ +|++++++.     ++.+. ...+..      ....+.. .|      . ++++
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~-----~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~   69 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE-----GVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTA   69 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSS-----SHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCc-----cHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHC
Confidence            68999998 9999999999999996 888888873     33221 111111      1222221 22      2 4588


Q ss_pred             CcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           76 QVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|++|.++|....             ...+.+.+.+.+.. .+.++
T Consensus        70 ~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~v  115 (309)
T 1ur5_A           70 NSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVI  115 (309)
T ss_dssp             TCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEE
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEE
Confidence            99999999987642             12245566666655 45443

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.26  E-value=0.00021  Score=58.95  Aligned_cols=36  Identities=31%  Similarity=0.390  Sum_probs=30.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |+++|+|.|.| .|.+|+.++..|.+.|++|++.+|+
T Consensus         1 M~~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~   36 (301)
T 3cky_A            1 MEKSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLM   36 (301)
T ss_dssp             ---CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC
Confidence            66678999999 5999999999999999999998888

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.26  E-value=0.0052  Score=54.08  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |.+|+|.|.| .|.+|+.++..|++.|++|++.+|+     +++.+.+......+..+..  ..+.+++.+.++++|+|+
T Consensus         2 ~~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVi   73 (484)
T 4gwg_A            2 NAQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRII   73 (484)
T ss_dssp             -CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEE
T ss_pred             CCCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEE
Confidence            4567999999 5999999999999999999999998     5454432221111111111  134454444455799999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+....
T Consensus        74 l~Vp~~   79 (484)
T 4gwg_A           74 LLVKAG   79 (484)
T ss_dssp             ECSCSS
T ss_pred             EecCCh
Confidence            988764

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.25  E-value=0.00045  Score=55.65  Aligned_cols=68  Identities=18%  Similarity=0.350  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+ +++|.|+ |+.|++++..|++.|+ +|+++.|+     .++.+.+.+    .....  +   .+++.+.++++|+||
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~-----~~ka~~la~----~~~~~--~---~~~~~~~~~~aDiVI  171 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRT-----IERAKALDF----PVKIF--S---LDQLDEVVKKAKSLF  171 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESC-----HHHHHTCCS----SCEEE--E---GGGHHHHHHTCSEEE
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHH----HcccC--C---HHHHHhhhcCCCEEE
Confidence            35 8999996 9999999999999998 89999998     545432211    22221  2   244566778999999


Q ss_pred             EcCCC
Q 044721           82 STVGH   86 (263)
Q Consensus        82 ~~a~~   86 (263)
                      ++.+.
T Consensus       172 natp~  176 (253)
T 3u62_A          172 NTTSV  176 (253)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            98754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.00054  Score=57.25  Aligned_cols=73  Identities=18%  Similarity=0.197  Sum_probs=48.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH--HHHHHh-cCcCEEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE--SLVKAI-KQVDVVIS   82 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~-~~~d~vv~   82 (263)
                      +++|+|++|.+|...++.+...|++|++++++     +++.+.+..+   ++..+ .|..+.+  .+.++- .++|++|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~-----~~~~~~~~~l---Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGK-----AAEHDYLRVL---GAKEV-LAREDVMAERIRPLDKQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----TTCHHHHHHT---TCSEE-EECC---------CCSCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHc---CCcEE-EecCCcHHHHHHHhcCCcccEEEE
Confidence            79999999999999999999999999999988     4444444443   22221 3444431  222222 26899999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      ++|..
T Consensus       223 ~~g~~  227 (328)
T 1xa0_A          223 PVGGR  227 (328)
T ss_dssp             CSTTT
T ss_pred             CCcHH
Confidence            99863

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.24  E-value=0.00035  Score=58.23  Aligned_cols=75  Identities=19%  Similarity=0.320  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+.+++|+||+|.+|...++.+...|++|+++.++      ++.+.+..+   ++.. ..|..+.+.+.+.++++|++|.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~------~~~~~~~~l---Ga~~-~i~~~~~~~~~~~~~g~D~v~d  221 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK------RNHAFLKAL---GAEQ-CINYHEEDFLLAISTPVDAVID  221 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH------HHHHHHHHH---TCSE-EEETTTSCHHHHCCSCEEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc------chHHHHHHc---CCCE-EEeCCCcchhhhhccCCCEEEE
Confidence            46789999999999999999999999999888744      234444444   2222 2466655546677789999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.|..
T Consensus       222 ~~g~~  226 (321)
T 3tqh_A          222 LVGGD  226 (321)
T ss_dssp             SSCHH
T ss_pred             CCCcH
Confidence            99853

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.22  E-value=0.00032  Score=58.16  Aligned_cols=34  Identities=21%  Similarity=0.367  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++++|.|.| .|.+|+.+++.|++.|++|++.+|+
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~   41 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRS   41 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357899998 6999999999999999999999998

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=97.22  E-value=0.0046  Score=51.32  Aligned_cols=67  Identities=22%  Similarity=0.291  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+|++.|.| .|.||+.+++.|...|++|++.+|+....             ..+....    ...+++++++++|+|+.
T Consensus       138 ~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~~~----~~~~l~ell~~aDiV~l  199 (315)
T 3pp8_A          138 EEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSW-------------PGVESYV----GREELRAFLNQTRVLIN  199 (315)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCC-------------TTCEEEE----SHHHHHHHHHTCSEEEE
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhh-------------hhhhhhc----ccCCHHHHHhhCCEEEE
Confidence            478999999 69999999999999999999999885321             0111111    12456666667777766


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +....
T Consensus       200 ~~Plt  204 (315)
T 3pp8_A          200 LLPNT  204 (315)
T ss_dssp             CCCCC
T ss_pred             ecCCc
Confidence            65543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.22  E-value=0.003  Score=52.45  Aligned_cols=99  Identities=14%  Similarity=0.157  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC--CCCCcchhhhhh--hhccCCcEEEEccCCCHHHHHHHhcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES--TLSAPSKSQLLD--HFKKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      |+.++|.|+|+ |.+|+.++..|+..|+ +|++.++++  ....-...+...  .+......+...+  |    .+.+++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~   78 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTAD   78 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCC
Confidence            34579999996 9999999999999998 999999882  110000011111  0111122222111  1    246889


Q ss_pred             cCEEEEcCCCccc-------------hhHHHHHHHHHHhCCccee
Q 044721           77 VDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        77 ~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~  108 (263)
                      +|++|.++|...-             ...+.+.+.+.+.. .+-+
T Consensus        79 aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~  122 (315)
T 3tl2_A           79 SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAI  122 (315)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence            9999999987641             12356666676665 4433

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.22  E-value=0.00067  Score=56.27  Aligned_cols=81  Identities=16%  Similarity=0.131  Sum_probs=55.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcE-EEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVN-LVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++++|.|++.-+|+.+++.|++.|++|+++.|+....    .+..+.+ ..... ......++++++.+.++++|+||
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l----~~ra~~l-a~~~~~~t~~~~t~~~~L~e~l~~ADIVI  250 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK----FTRGESL-KLNKHHVEDLGEYSEDLLKKCSLDSDVVI  250 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE----EESCCCS-SCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHH----HhHHHHH-hhhcccccccccccHhHHHHHhccCCEEE
Confidence            478999999877789999999999999999998873110    0011111 11111 11111144578899999999999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      .+.|...
T Consensus       251 sAtg~p~  257 (320)
T 1edz_A          251 TGVPSEN  257 (320)
T ss_dssp             ECCCCTT
T ss_pred             ECCCCCc
Confidence            9998764

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.21  E-value=0.0038  Score=53.38  Aligned_cols=70  Identities=19%  Similarity=0.230  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++|+|.|+ |.+|+.+++.+.+.|++|++++.++....   .    ..   .-..+..|+.|.+.+.++++.+|+|..
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~---~----~~---ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPC---A----QV---ADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT---T----TT---CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch---H----Hh---CCceEecCcCCHHHHHHHHHhCCEeee
Confidence            4679999995 89999999999999999999987643210   0    00   113456899999999999999998854


Q ss_pred             c
Q 044721           83 T   83 (263)
Q Consensus        83 ~   83 (263)
                      .
T Consensus        82 ~   82 (389)
T 3q2o_A           82 E   82 (389)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.20  E-value=0.00085  Score=54.40  Aligned_cols=66  Identities=18%  Similarity=0.242  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +++++|+|+ |+.|++++..|++.|.+|+++.|+     .++.+.+..+   ++...  ++.+.       .+.|+|||+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt-----~~ka~~la~~---~~~~~--~~~~l-------~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRS-----SRGLDFFQRL---GCDCF--MEPPK-------SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----CTTHHHHHHH---TCEEE--SSCCS-------SCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHC---CCeEe--cHHHh-------ccCCEEEEc
Confidence            578999996 999999999999999999999999     4444322222   12322  33221       279999999


Q ss_pred             CCCc
Q 044721           84 VGHT   87 (263)
Q Consensus        84 a~~~   87 (263)
                      .+..
T Consensus       180 Tp~G  183 (269)
T 3phh_A          180 TSAS  183 (269)
T ss_dssp             CTTC
T ss_pred             ccCC
Confidence            7654

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.19  E-value=0.0023  Score=57.66  Aligned_cols=89  Identities=20%  Similarity=0.209  Sum_probs=69.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++++++..     .+.   +    ..++.+|.+|++.++++ ++++|.+|-+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~-----~~~---~----~~~i~gD~t~~~~L~~agi~~ad~vi~~  415 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESP-----VCN---D----HVVVYGDATVGQTLRQAGIDRASGIIVT  415 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCS-----SCC---S----SCEEESCSSSSTHHHHHTTTSCSEEEEC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHH-----Hhh---c----CCEEEeCCCCHHHHHhcCccccCEEEEE
Confidence            67999996 999999999999999999999999533     221   1    27899999999998874 6789999999


Q ss_pred             CCCccchhHHHHHHHHHHhCCcc-eee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIK-RFF  109 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~-~~i  109 (263)
                      .+..  .....+...+++.+ .+ +++
T Consensus       416 ~~~d--~~ni~~~~~ak~l~-~~~~ii  439 (565)
T 4gx0_A          416 TNDD--STNIFLTLACRHLH-SHIRIV  439 (565)
T ss_dssp             CSCH--HHHHHHHHHHHHHC-SSSEEE
T ss_pred             CCCc--hHHHHHHHHHHHHC-CCCEEE
Confidence            8864  33444556677777 66 555

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.19  E-value=0.0018  Score=52.98  Aligned_cols=82  Identities=24%  Similarity=0.323  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |++|+|.|.|+ |.+|++++..|++.|+   +|++.+|+     +++.+.+...  .++...       .+..++++++|
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~-----~~~~~~l~~~--~gi~~~-------~~~~~~~~~aD   65 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRS-----LDKLDFFKEK--CGVHTT-------QDNRQGALNAD   65 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSS-----SHHHHHHHHT--TCCEEE-------SCHHHHHSSCS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCC-----HHHHHHHHHH--cCCEEe-------CChHHHHhcCC
Confidence            34578999995 9999999999999998   89999998     4444432221  133221       12345677899


Q ss_pred             EEEEcCCCccchhHHHHHHHHHH
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKE  101 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~  101 (263)
                      +||-+..+.   ....+++.+..
T Consensus        66 vVilav~p~---~~~~vl~~l~~   85 (280)
T 3tri_A           66 VVVLAVKPH---QIKMVCEELKD   85 (280)
T ss_dssp             EEEECSCGG---GHHHHHHHHHH
T ss_pred             eEEEEeCHH---HHHHHHHHHHh
Confidence            999888543   33445555443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.18  E-value=0.00089  Score=55.25  Aligned_cols=35  Identities=31%  Similarity=0.519  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++|.|.||.|.+|..++..|.+.|++|++.+|+.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            35899999889999999999999999999998873

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.18  E-value=0.0018  Score=53.77  Aligned_cols=95  Identities=18%  Similarity=0.176  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-C--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-G--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |||.|+||+|.+|+.++..|... +  .++++++++. .. +.....+++. .....+... .+  .+..+.++++|++|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~-~G~a~Dl~~~-~~~~~v~~~-~~--~~~~~~~~~aDivi   74 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT-PGVAVDLSHI-PTAVKIKGF-SG--EDATPALEGADVVL   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-TH-HHHHHHHHTS-CSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cc-hhHHHHhhCC-CCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence            58999999999999999999876 5  4788888874 11 1111112221 111222111 01  11246788999999


Q ss_pred             EcCCCccc-------------hhHHHHHHHHHHhCCcc
Q 044721           82 STVGHTLL-------------GDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        82 ~~a~~~~~-------------~~~~~l~~~~~~~~~~~  106 (263)
                      .++|...-             ...+.+.+.+.+.. .+
T Consensus        75 i~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~  111 (312)
T 3hhp_A           75 ISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PK  111 (312)
T ss_dssp             ECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TT
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            99997651             12355666666665 44

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.18  E-value=0.0014  Score=56.05  Aligned_cols=75  Identities=17%  Similarity=0.286  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEcc----------------CCC-
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD----------------VLN-   66 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~~-   66 (263)
                      +.+++|+|+ |-+|..+++.+...|++|++++++     +.+.+.+..+   +..++..+                +++ 
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~~---G~~~~~~~~~~~~d~~~~~~ya~e~s~~  260 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVR-----PAAKEQVASL---GAKFIAVEDEEFKAAETAGGYAKEMSGE  260 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----TTHHHHHHHT---TCEECCCCC-----------------CH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHc---CCceeecccccccccccccchhhhcchh
Confidence            568999996 999999999999999999999998     4444433333   22222221                222 


Q ss_pred             -----HHHHHHHhcCcCEEEEcCCCc
Q 044721           67 -----HESLVKAIKQVDVVISTVGHT   87 (263)
Q Consensus        67 -----~~~~~~~~~~~d~vv~~a~~~   87 (263)
                           .+.+.++++++|+||+++...
T Consensus       261 ~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          261 YQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                 357888899999999997544

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.17  E-value=0.00068  Score=57.07  Aligned_cols=73  Identities=21%  Similarity=0.348  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHh-cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAI-KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~   77 (263)
                      .+.+++|+|+ |.+|...++.+...|+ +|++++++     +++.+.+..+ .   . ...|..+.   +.+.++. .++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~-----~~~~~~~~~l-a---~-~v~~~~~~~~~~~~~~~~~~g~  232 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPN-----PYRLAFARPY-A---D-RLVNPLEEDLLEVVRRVTGSGV  232 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC-----HHHHGGGTTT-C---S-EEECTTTSCHHHHHHHHHSSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh-H---H-hccCcCccCHHHHHHHhcCCCC
Confidence            3578999999 9999999999999999 99999988     5555444333 1   1 12355442   2233322 379


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |++|.++|.
T Consensus       233 D~vid~~g~  241 (343)
T 2dq4_A          233 EVLLEFSGN  241 (343)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.17  E-value=0.0014  Score=56.18  Aligned_cols=73  Identities=16%  Similarity=0.311  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC-----------------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL-----------------   65 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----------------   65 (263)
                      .+++++|+|+ |.+|..+++.+...|++|++++|+     +.+.+.+..+   +...+..|..                 
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~-----~~~~~~~~~~---Ga~~~~i~~~~~~~~~~~~~~~~~~s~  241 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVR-----AATKEQVESL---GGKFITVDDEAMKTAETAGGYAKEMGE  241 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----STTHHHHHHT---TCEECCC--------------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCeEEeecccccccccccccchhhcCH
Confidence            4679999995 999999999999999999999988     3333333332   2222211211                 


Q ss_pred             -----CHHHHHHHhcCcCEEEEcC
Q 044721           66 -----NHESLVKAIKQVDVVISTV   84 (263)
Q Consensus        66 -----~~~~~~~~~~~~d~vv~~a   84 (263)
                           ..+.+.+.++++|+||+++
T Consensus       242 ~~~~~~~~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          242 EFRKKQAEAVLKELVKTDIAITTA  265 (384)
T ss_dssp             ---CCHHHHHHHHHTTCSEEEECC
T ss_pred             HHHhhhHHHHHHHhCCCCEEEECC
Confidence                 1234777888999999998

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.17  E-value=0.002  Score=53.62  Aligned_cols=95  Identities=15%  Similarity=0.128  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +++|.|+|+ |++|..++..|+..|.  +|++++++..... .....+.+..  ...+.+. .  .+    .++++++|+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~-g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDv   77 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI-GEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDV   77 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC-HHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHH-HHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCE
Confidence            578999997 9999999999999986  8999998853321 1111111110  0122222 1  12    346889999


Q ss_pred             EEEcCCCccch-------------hHHHHHHHHHHhCCccee
Q 044721           80 VISTVGHTLLG-------------DQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        80 vv~~a~~~~~~-------------~~~~l~~~~~~~~~~~~~  108 (263)
                      +|.++|...-.             ..+.+.+.+.+.. .+-+
T Consensus        78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~  118 (318)
T 1y6j_A           78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGV  118 (318)
T ss_dssp             EEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCE
T ss_pred             EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcE
Confidence            99999976411             1356666676665 4433

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.17  E-value=0.0023  Score=53.34  Aligned_cols=92  Identities=14%  Similarity=0.219  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhh-hhhhc-----cCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL-LDHFK-----KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~~~-----~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      +.+||.|+|+ |.+|+.++..|+..+.  ++++++++     +++.+. ..++.     ...+.+.. |  +    .+++
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~   70 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVV-----KDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDC   70 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHh
Confidence            4579999998 9999999999998875  79999987     444331 11111     12333332 2  2    3468


Q ss_pred             cCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCccee
Q 044721           75 KQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~  108 (263)
                      +++|+||..+|....             ...+.+.+.+.+.. ..-+
T Consensus        71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~  116 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGI  116 (318)
T ss_dssp             TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSE
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence            899999999987642             12345666666665 4433

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.16  E-value=0.00036  Score=57.24  Aligned_cols=34  Identities=26%  Similarity=0.385  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ||+|.|.| .|.+|+.+++.|++.|++|++.+|++
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNP   34 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            35899998 69999999999999999999999983

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.14  E-value=0.0011  Score=56.36  Aligned_cols=77  Identities=13%  Similarity=0.113  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhc--CcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIK--QVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~   79 (263)
                      .+.+++|+| +|.+|...++.+...|++|++++++     +++.+.+..+. .. .++.-+-.+ .+.+.++..  ++|+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~lG-a~-~vi~~~~~~~~~~v~~~~~g~g~D~  260 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSS-----REKLDRAFALG-AD-HGINRLEEDWVERVYALTGDRGADH  260 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHT-CS-EEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecC-----chhHHHHHHcC-CC-EEEcCCcccHHHHHHHHhCCCCceE
Confidence            367899999 8999999999999999999999988     66666555542 11 222211112 234444443  7999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|.++|..
T Consensus       261 vid~~g~~  268 (363)
T 3uog_A          261 ILEIAGGA  268 (363)
T ss_dssp             EEEETTSS
T ss_pred             EEECCChH
Confidence            99999944

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.14  E-value=0.0027  Score=52.38  Aligned_cols=98  Identities=22%  Similarity=0.194  Sum_probs=66.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc----------cCCcEEEEccCCCHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----------KLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   72 (263)
                      .|++|.+.| -|..|+.+++.|++.||+|++.+|+     +++.+.+....          .....++..=+.|.+.+++
T Consensus         2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~-----~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~   75 (300)
T 3obb_A            2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEG   75 (300)
T ss_dssp             -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHH
T ss_pred             CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCC-----HHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHH
Confidence            467999999 6999999999999999999999998     44443222110          1234555566677777777


Q ss_pred             HhcCc----------CEEEEcCCCccchhHHHHHHHHHHhCCccee
Q 044721           73 AIKQV----------DVVISTVGHTLLGDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        73 ~~~~~----------d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~  108 (263)
                      .+.+.          +++|.+ +.......+++.+.+.+.| +..+
T Consensus        76 V~~~~~g~~~~~~~g~iiId~-sT~~p~~~~~~a~~~~~~G-~~~l  119 (300)
T 3obb_A           76 LYLDDDGLLAHIAPGTLVLEC-STIAPTSARKIHAAARERG-LAML  119 (300)
T ss_dssp             HHHSSSSSTTSCCC-CEEEEC-SCCCHHHHHHHHHHHHTTT-CEEE
T ss_pred             HHhchhhhhhcCCCCCEEEEC-CCCCHHHHHHHHHHHHHcC-CEEE
Confidence            65421          344444 3344566788888888877 5543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.14  E-value=0.00057  Score=57.03  Aligned_cols=67  Identities=31%  Similarity=0.491  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +|+|.|.| .|.+|+.+++.|++.|++|++.+|+     +++.+.+..   .++..       ..++.++++++|+||.+
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~l~~---~g~~~-------~~~~~e~~~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRT-----PARAASLAA---LGATI-------HEQARAAARDADIVVSM   94 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHT---TTCEE-------ESSHHHHHTTCSEEEEC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCC-----HHHHHHHHH---CCCEe-------eCCHHHHHhcCCEEEEE
Confidence            46899998 5999999999999999999999998     544433222   12221       12344566677777777


Q ss_pred             CCC
Q 044721           84 VGH   86 (263)
Q Consensus        84 a~~   86 (263)
                      ...
T Consensus        95 vp~   97 (320)
T 4dll_A           95 LEN   97 (320)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            653

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.14  E-value=0.0007  Score=58.71  Aligned_cols=70  Identities=16%  Similarity=0.212  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++|+|.|+ |.+|+.+++.+.+.|++|++++.++..  + ..    .+   .-..+..|+.|.+.+.++.+++|+|+.
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~--p-~~----~~---ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPAS--P-AG----AV---ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTC--H-HH----HH---SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcC--c-hh----hh---CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            4679999995 899999999999999999988765321  1 11    11   113556899999999998899999985


Q ss_pred             c
Q 044721           83 T   83 (263)
Q Consensus        83 ~   83 (263)
                      .
T Consensus       103 ~  103 (419)
T 4e4t_A          103 E  103 (419)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.14  E-value=0.002  Score=52.64  Aligned_cols=98  Identities=9%  Similarity=0.092  Sum_probs=57.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |+++.+|.|.|++|.+|+.+++.+.+. +.+++.. +|+.+..   ..+.+..+.+  ..  ..++.-.+++++++.++|
T Consensus        18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~---~G~d~gel~G--~~--~~gv~v~~dl~~ll~~aD   90 (288)
T 3ijp_A           18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSF---VDKDASILIG--SD--FLGVRITDDPESAFSNTE   90 (288)
T ss_dssp             ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTT---TTSBGGGGTT--CS--CCSCBCBSCHHHHTTSCS
T ss_pred             ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc---cccchHHhhc--cC--cCCceeeCCHHHHhcCCC
Confidence            445679999999999999999999865 5676655 4543211   0000011100  00  111111235566778899


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|.+..+   ......++.+.++| +..++
T Consensus        91 VvIDFT~p---~a~~~~~~~~l~~G-v~vVi  117 (288)
T 3ijp_A           91 GILDFSQP---QASVLYANYAAQKS-LIHII  117 (288)
T ss_dssp             EEEECSCH---HHHHHHHHHHHHHT-CEEEE
T ss_pred             EEEEcCCH---HHHHHHHHHHHHcC-CCEEE
Confidence            99988753   34566778888888 65554

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.14  E-value=0.0005  Score=56.39  Aligned_cols=33  Identities=33%  Similarity=0.491  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|.| .|.+|+.+++.|++.|++|++.+|++
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSP   34 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            6899999 59999999999999999999999983

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.13  E-value=0.00045  Score=60.46  Aligned_cols=35  Identities=23%  Similarity=0.191  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +.+++++|||+ |.||+.+++.|.+.|++|++++++
T Consensus       263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~  297 (488)
T 3ond_A          263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEID  297 (488)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            46899999997 599999999999999999999887

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.12  E-value=0.00045  Score=58.10  Aligned_cols=78  Identities=18%  Similarity=0.120  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-------CEEEEEcCCCCCCcchhh----hhhhhccCCc-EEEEccCCCHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQ----LLDHFKKLGV-NLVIGDVLNHESL   70 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~----~~~~~~~~~~-~~~~~D~~~~~~~   70 (263)
                      +.-||.|+||+|+||+.++..|+....       ++.+++.++.   ..+.+    .+++...+.. ..+..     .+.
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~---~~~~~Gva~DL~~~~~~~~~~~~~~-----~~~   94 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPA---LKALAGVEAELEDCAFPLLDKVVVT-----ADP   94 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTTCTTEEEEEEE-----SCH
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCc---cccchhhhhhhhhcCccCCCcEEEc-----CCh
Confidence            345899999999999999999987642       5777776621   11111    1122111111 12211     123


Q ss_pred             HHHhcCcCEEEEcCCCcc
Q 044721           71 VKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~   88 (263)
                      .++++++|++|-+||...
T Consensus        95 ~~a~~~advVvi~aG~pr  112 (345)
T 4h7p_A           95 RVAFDGVAIAIMCGAFPR  112 (345)
T ss_dssp             HHHTTTCSEEEECCCCCC
T ss_pred             HHHhCCCCEEEECCCCCC
Confidence            568999999999999875

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.10  E-value=0.0013  Score=56.54  Aligned_cols=75  Identities=20%  Similarity=0.312  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC-------------CH--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL-------------NH--   67 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~--   67 (263)
                      .+++++|+|+ |.+|..+++.+...|++|++++|+     +.+.+.++.+   +..++..|..             +.  
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~-----~~~~~~~~~l---Ga~~~~~~~~~~~~~~~g~~~~~~~~~  241 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTR-----PEVKEQVQSM---GAEFLELDFKEEAGSGDGYAKVMSDAF  241 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----GGGHHHHHHT---TCEECCC--------CCHHHHHHSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHc---CCEEEEecccccccccccchhhccHHH
Confidence            3679999995 999999999999999999999988     5454433333   3333322221             11  


Q ss_pred             -----HHHHHHhcCcCEEEEcCCC
Q 044721           68 -----ESLVKAIKQVDVVISTVGH   86 (263)
Q Consensus        68 -----~~~~~~~~~~d~vv~~a~~   86 (263)
                           +.+.+.++++|+||.+++.
T Consensus       242 ~~~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          242 IKAEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcc
Confidence                 1467777889999999644

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.09  E-value=0.0015  Score=54.88  Aligned_cols=75  Identities=16%  Similarity=0.129  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~d~   79 (263)
                      .+.+++|+|+ |.+|...++.+...|++|++++++     +++.+.++.+.   ... ..|..+.   +.+.+...++|+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~lG---a~~-~i~~~~~~~~~~~~~~~g~~d~  235 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDID-----DAKLNLARRLG---AEV-AVNARDTDPAAWLQKEIGGAHG  235 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT---CSE-EEETTTSCHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHcC---CCE-EEeCCCcCHHHHHHHhCCCCCE
Confidence            4678999997 899999999999999999999998     66666555542   222 2345443   333333348999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|.+++..
T Consensus       236 vid~~g~~  243 (340)
T 3s2e_A          236 VLVTAVSP  243 (340)
T ss_dssp             EEESSCCH
T ss_pred             EEEeCCCH
Confidence            99998743

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.09  E-value=0.00078  Score=55.06  Aligned_cols=68  Identities=15%  Similarity=0.259  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .+++++|+|+ |+.|++++..|.+.|. +|+++.|+     .++.+.+.    ..+..+  +   .+++.+ + ++|+||
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt-----~~ka~~La----~~~~~~--~---~~~l~~-l-~~DivI  183 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRN-----PEKTSEIY----GEFKVI--S---YDELSN-L-KGDVII  183 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHC----TTSEEE--E---HHHHTT-C-CCSEEE
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHH----HhcCcc--c---HHHHHh-c-cCCEEE
Confidence            4689999996 8999999999999998 89999999     55543222    122222  1   233434 4 899999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      |+.+..
T Consensus       184 naTp~G  189 (282)
T 3fbt_A          184 NCTPKG  189 (282)
T ss_dssp             ECSSTT
T ss_pred             ECCccC
Confidence            998653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.09  E-value=0.00071  Score=57.07  Aligned_cols=70  Identities=24%  Similarity=0.294  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+.+++|+|+ |.+|...++.+...|++|++++++     +++.+.+..+   +...+.   .+.+.+.+   ++|++|.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~v~---~~~~~~~~---~~D~vid  240 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARN-----EHKKQDALSM---GVKHFY---TDPKQCKE---ELDFIIS  240 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSS-----STTHHHHHHT---TCSEEE---SSGGGCCS---CEEEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHhc---CCCeec---CCHHHHhc---CCCEEEE
Confidence            4678999997 999999999999999999999888     4555544444   222222   34443322   8999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      ++|..
T Consensus       241 ~~g~~  245 (348)
T 3two_A          241 TIPTH  245 (348)
T ss_dssp             CCCSC
T ss_pred             CCCcH
Confidence            99876

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.09  E-value=0.00045  Score=56.38  Aligned_cols=71  Identities=28%  Similarity=0.404  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|.|+ |.+|++++..|.+.|++|++.+|+     +++.+.+...  -++.     ..+  ++.+.++++|+||+
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~-----~~~~~~l~~~--~g~~-----~~~--~~~~~~~~aDiVi~  192 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRT-----KEKAIKLAQK--FPLE-----VVN--SPEEVIDKVQVIVN  192 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS-----HHHHHHHTTT--SCEE-----ECS--CGGGTGGGCSEEEE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHH--cCCe-----eeh--hHHhhhcCCCEEEE
Confidence            3679999995 999999999999999999998888     4444322211  1221     111  23446678999999


Q ss_pred             cCCCcc
Q 044721           83 TVGHTL   88 (263)
Q Consensus        83 ~a~~~~   88 (263)
                      +.+...
T Consensus       193 atp~~~  198 (275)
T 2hk9_A          193 TTSVGL  198 (275)
T ss_dssp             CSSTTS
T ss_pred             eCCCCC
Confidence            988653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.09  E-value=0.001  Score=53.98  Aligned_cols=58  Identities=19%  Similarity=0.291  Sum_probs=47.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..+++++|.|+++-+|+.++..|++.|++|+++.|+.                             .++++.++++|+||
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-----------------------------~~L~~~~~~ADIVI  208 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-----------------------------KDLSLYTRQADLII  208 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-----------------------------SCHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHhhcCCEEE
Confidence            3689999999999999999999999999999876551                             12456788999999


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      ...|...
T Consensus       209 ~Avg~p~  215 (285)
T 3p2o_A          209 VAAGCVN  215 (285)
T ss_dssp             ECSSCTT
T ss_pred             ECCCCCC
Confidence            9998653

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.09  E-value=0.013  Score=51.29  Aligned_cols=131  Identities=15%  Similarity=0.108  Sum_probs=78.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcC-cCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ-VDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~vv   81 (263)
                      ++++|+|.|. |..|.++++.|.++|++|++.+++...    .....+.+...++.+..+.-.+     +.+++ +|.||
T Consensus         8 ~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~----~~~~~~~L~~~gi~~~~g~~~~-----~~~~~~~d~vv   77 (451)
T 3lk7_A            8 ENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFD----ENPTAQSLLEEGIKVVCGSHPL-----ELLDEDFCYMI   77 (451)
T ss_dssp             TTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGG----GCHHHHHHHHTTCEEEESCCCG-----GGGGSCEEEEE
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCccc----CChHHHHHHhCCCEEEECCChH-----HhhcCCCCEEE
Confidence            4689999997 999999999999999999999987421    1111233334567766554321     23456 99999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeeeccc-cC-CCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFPSEF-GN-DVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~-g~-~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                      .+.|...-   ...+..+.+.+ ++.+--..+ .. .....-.+...++-..++..+..++++.|.+.
T Consensus        78 ~spgi~~~---~p~~~~a~~~g-i~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~  141 (451)
T 3lk7_A           78 KNPGIPYN---NPMVKKALEKQ-IPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRG  141 (451)
T ss_dssp             ECTTSCTT---SHHHHHHHHTT-CCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCcCCCC---ChhHHHHHHCC-CcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCE
Confidence            99887642   22355666666 543210000 00 00011111224455567888888888888754

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.09  E-value=0.0028  Score=53.73  Aligned_cols=90  Identities=21%  Similarity=0.343  Sum_probs=54.4

Q ss_pred             CeEEEEcCCChhHHHHHH-HHHHCCC---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVE-ASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++|.|.||||++|+.+++ .|.++.+   ++..++.+....   +.   ..+.+....  .-|..++++    ++++|++
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~---~~---~~~~~~~~~--~~~~~~~~~----~~~~Dvv   68 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV---PA---PNFGKDAGM--LHDAFDIES----LKQLDAV   68 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS---BC---CCSSSCCCB--CEETTCHHH----HTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCc---CH---HHhCCCceE--EEecCChhH----hccCCEE
Confidence            579999999999999999 6666653   455444322111   11   112111111  123434332    5799999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      |.++|..   ....+++...+.| ++.+|+
T Consensus        69 f~a~~~~---~s~~~~~~~~~~G-~k~~VI   94 (370)
T 3pzr_A           69 ITCQGGS---YTEKVYPALRQAG-WKGYWI   94 (370)
T ss_dssp             EECSCHH---HHHHHHHHHHHTT-CCCEEE
T ss_pred             EECCChH---HHHHHHHHHHHCC-CCEEEE
Confidence            9998854   4566777777888 764443

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.07  E-value=0.0029  Score=52.03  Aligned_cols=72  Identities=17%  Similarity=0.173  Sum_probs=49.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh----hhhhhc---cCCcEEEEccCCCHHHHHHHhc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ----LLDHFK---KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~----~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |+|.|+|+ |.+|+.++..|+..|+  +|++++++     +++.+    .+.+..   .....+...  +|    .++++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~-----~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~   68 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLK   68 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECC-----hHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhC
Confidence            58999998 9999999999999987  89999998     43332    111111   112222211  12    35788


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|++|.++|...
T Consensus        69 ~aDiVViaag~~~   81 (294)
T 1oju_A           69 GSEIIVVTAGLAR   81 (294)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            9999999998764

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0012  Score=55.93  Aligned_cols=75  Identities=17%  Similarity=0.283  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH--HHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH--ESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~--~~   77 (263)
                      .+.+++|+|+ |.+|...++.+... |++|++++++     +++.+.+..+   +... ..|..+.  +.+.++..  ++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~-vi~~~~~~~~~v~~~~~g~g~  255 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK-----EEKLKLAERL---GADH-VVDARRDPVKQVMELTRGRGV  255 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSCHHHHHHHHTTTCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC-----HHHHHHHHHh---CCCE-EEeccchHHHHHHHHhCCCCC
Confidence            3678999999 99999999988888 9999999988     6666655544   2222 2355554  44444443  69


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|.++|..
T Consensus       256 Dvvid~~G~~  265 (359)
T 1h2b_A          256 NVAMDFVGSQ  265 (359)
T ss_dssp             EEEEESSCCH
T ss_pred             cEEEECCCCc
Confidence            9999999864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.03  E-value=0.00049  Score=56.93  Aligned_cols=33  Identities=18%  Similarity=0.243  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +|+|.|.| .|.+|+.++..|++.|++|++.+|+
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~   39 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLN   39 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECC
Confidence            46899998 6999999999999999999999998

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.02  E-value=0.0053  Score=50.56  Aligned_cols=100  Identities=17%  Similarity=0.151  Sum_probs=57.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh------hhhhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ------LLDHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +||.+.| -|.+|+.+++.|++.||+|++.+|+++...+....      ...++ .....++..=+.+...+++.+.   
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~-~~~~dvvi~~l~~~~~~~~v~~~~~   83 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDA-ITPGGIVFSVLADDAAVEELFSMEL   83 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGG-CCTTCEEEECCSSHHHHHHHSCHHH
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHH-HhcCCceeeeccchhhHHHHHHHHH
Confidence            5899999 69999999999999999999999986442211100      00111 1223444444555555444332   


Q ss_pred             -----CcCEEEEcCCCccchhHHHHHHHHHHhCCccee
Q 044721           76 -----QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRF  108 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~  108 (263)
                           .-+++|.+. .......+++.+.+.+.| +..+
T Consensus        84 ~~~~~~~~iiid~s-T~~p~~~~~~~~~~~~~g-~~~l  119 (297)
T 4gbj_A           84 VEKLGKDGVHVSMS-TISPETSRQLAQVHEWYG-AHYV  119 (297)
T ss_dssp             HHHHCTTCEEEECS-CCCHHHHHHHHHHHHHTT-CEEE
T ss_pred             HhhcCCCeEEEECC-CCChHHHHHHHHHHHhcC-Ccee
Confidence                 234555543 344566778888888887 5443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.02  E-value=0.0011  Score=56.09  Aligned_cols=73  Identities=18%  Similarity=0.335  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCChhHHHH-HHHH-HHCCCC-EEEEEcCCCCCCcc---hhhhhhhhccCCcEEEEccCCCH--HHHHHHhc
Q 044721            4 KSKILFIGGTGYIGKFI-VEAS-VKAGHP-TFVLVRESTLSAPS---KSQLLDHFKKLGVNLVIGDVLNH--ESLVKAIK   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l-~~~L-~~~g~~-V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~   75 (263)
                      +.+|+|+|+ |.+|... ++.+ ...|++ |++++++     ++   +.+.+..+   ++..+  |..+.  ..+.++-.
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~-----~~~~~~~~~~~~l---Ga~~v--~~~~~~~~~i~~~~g  241 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRR-----DRPDPTIDIIEEL---DATYV--DSRQTPVEDVPDVYE  241 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECC-----CSSCHHHHHHHHT---TCEEE--ETTTSCGGGHHHHSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCC-----cccHHHHHHHHHc---CCccc--CCCccCHHHHHHhCC
Confidence            389999999 9999999 8877 678987 9999988     44   55544443   34444  65542  22444412


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|.++|..
T Consensus       242 g~Dvvid~~g~~  253 (357)
T 2b5w_A          242 QMDFIYEATGFP  253 (357)
T ss_dssp             CEEEEEECSCCH
T ss_pred             CCCEEEECCCCh
Confidence            699999999853

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.00  E-value=0.0032  Score=53.59  Aligned_cols=75  Identities=12%  Similarity=0.152  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc-CcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK-QVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~-~~d   78 (263)
                      .+.+++|+||+|.+|...++.+...|++|+++. +     +++.+.+..+   ++.. ..|..+.   +.+.++.. ++|
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~-----~~~~~~~~~l---Ga~~-vi~~~~~~~~~~v~~~t~g~~d  233 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-S-----PHNFDLAKSR---GAEE-VFDYRAPNLAQTIRTYTKNNLR  233 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-C-----GGGHHHHHHT---TCSE-EEETTSTTHHHHHHHHTTTCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-C-----HHHHHHHHHc---CCcE-EEECCCchHHHHHHHHccCCcc
Confidence            357899999999999999999999999988875 4     4455554544   2222 2355443   23444333 599


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      ++|.+.|..
T Consensus       234 ~v~d~~g~~  242 (371)
T 3gqv_A          234 YALDCITNV  242 (371)
T ss_dssp             EEEESSCSH
T ss_pred             EEEECCCch
Confidence            999999863

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.00  E-value=0.0014  Score=55.99  Aligned_cols=76  Identities=14%  Similarity=0.235  Sum_probs=54.5

Q ss_pred             CCeEEEEc-CCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--Cc
Q 044721            4 KSKILFIG-GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--QV   77 (263)
Q Consensus         4 ~~~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~   77 (263)
                      +.+++|.| |+|.+|...++.+...|++|++++++     +++.+.+..+.. . .+  .|..+.   +.+.++..  ++
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~lGa-~-~~--~~~~~~~~~~~v~~~t~~~g~  241 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK-----QEQADLLKAQGA-V-HV--CNAASPTFMQDLTEALVSTGA  241 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS-----HHHHHHHHHTTC-S-CE--EETTSTTHHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHhCCC-c-EE--EeCCChHHHHHHHHHhcCCCc
Confidence            56899997 89999999999999999999999988     666665555421 1 12  344433   33444433  79


Q ss_pred             CEEEEcCCCcc
Q 044721           78 DVVISTVGHTL   88 (263)
Q Consensus        78 d~vv~~a~~~~   88 (263)
                      |++|.+.|...
T Consensus       242 d~v~d~~g~~~  252 (379)
T 3iup_A          242 TIAFDATGGGK  252 (379)
T ss_dssp             CEEEESCEEES
T ss_pred             eEEEECCCchh
Confidence            99999998653

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.00  E-value=0.00074  Score=56.86  Aligned_cols=75  Identities=11%  Similarity=0.183  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~   77 (263)
                      .+.+++|+|+ |.+|...++.+...  |++|++++++     +++.+.+..+.   ...+ .|..+ .+.++++.+  ++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~-----~~~~~~~~~lG---a~~v-i~~~~~~~~~~~~~~g~g~  239 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRS-----KKHRDFALELG---ADYV-SEMKDAESLINKLTDGLGA  239 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSC-----HHHHHHHHHHT---CSEE-ECHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCC-----HHHHHHHHHhC---CCEE-eccccchHHHHHhhcCCCc
Confidence            3678999999 99999999998888  9999999888     55665555542   2221 24433 333444433  69


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|.++|..
T Consensus       240 D~vid~~g~~  249 (344)
T 2h6e_A          240 SIAIDLVGTE  249 (344)
T ss_dssp             EEEEESSCCH
T ss_pred             cEEEECCCCh
Confidence            9999999863

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.97  E-value=0.00029  Score=59.16  Aligned_cols=73  Identities=23%  Similarity=0.231  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhh----hhhh---ccCCcEEEEccCCCHHHHHHHhc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQL----LDHF---KKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~----~~~~---~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|.|+|| |.+|..++..|+..|+ +|++.++++     ++.+.    +.+.   ......+..     ..+++++++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~-----~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~   77 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVK-----GMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALT   77 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS-----SHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCh-----hHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhC
Confidence            368999997 9999999999999998 999999984     33221    1110   011111111     123455788


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|+||.++|..
T Consensus        78 ~aDiVi~a~g~p   89 (331)
T 1pzg_A           78 GADCVIVTAGLT   89 (331)
T ss_dssp             TCSEEEECCSCS
T ss_pred             CCCEEEEccCCC
Confidence            999999999655

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=96.95  E-value=0.00014  Score=61.89  Aligned_cols=79  Identities=15%  Similarity=0.229  Sum_probs=49.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-----cCCcEEEEccCCCHHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      ||+|++|.|.|+ |.+|..++..|++.|++|++.+|+     +++.+.+....     .++... ...+.-..+..++++
T Consensus        12 ~m~M~kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   84 (366)
T 1evy_A           12 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYN   84 (366)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHTTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHT
T ss_pred             hhccCeEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcCccccccccccc-ccceeeeCCHHHHHc
Confidence            344448999995 999999999999999999999998     44433222210     001000 000000123445677


Q ss_pred             CcCEEEEcCCC
Q 044721           76 QVDVVISTVGH   86 (263)
Q Consensus        76 ~~d~vv~~a~~   86 (263)
                      ++|+||.+...
T Consensus        85 ~aDvVilav~~   95 (366)
T 1evy_A           85 GAEIILFVIPT   95 (366)
T ss_dssp             TCSSEEECCCH
T ss_pred             CCCEEEECCCh
Confidence            89999998865

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=96.95  E-value=0.0073  Score=49.87  Aligned_cols=85  Identities=14%  Similarity=0.107  Sum_probs=53.4

Q ss_pred             CCCCCeEEEEcCCChhHHH-HHHHHHH-CCCCEE-EEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCc
Q 044721            1 MASKSKILFIGGTGYIGKF-IVEASVK-AGHPTF-VLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQV   77 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~-l~~~L~~-~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (263)
                      ||+++++.|.|. |.+|+. .++.|.+ .+++++ +.+|+     +++.+.+....  ++.   . +.|   ++++++++
T Consensus         3 ~M~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~a~~~--~~~---~-~~~---~~~ll~~~   67 (308)
T 3uuw_A            3 AMKNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPN-----KVKREKICSDY--RIM---P-FDS---IESLAKKC   67 (308)
T ss_dssp             --CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSC-----HHHHHHHHHHH--TCC---B-CSC---HHHHHTTC
T ss_pred             ccccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCC-----HHHHHHHHHHc--CCC---C-cCC---HHHHHhcC
Confidence            466789999995 999996 8888887 467777 45666     44443222211  111   1 334   44556699


Q ss_pred             CEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           78 DVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        78 d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      |+|+.+....   .+..++..+.++|
T Consensus        68 D~V~i~tp~~---~h~~~~~~al~~g   90 (308)
T 3uuw_A           68 DCIFLHSSTE---THYEIIKILLNLG   90 (308)
T ss_dssp             SEEEECCCGG---GHHHHHHHHHHTT
T ss_pred             CEEEEeCCcH---hHHHHHHHHHHCC
Confidence            9999887754   3455666677777

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.94  E-value=0.0087  Score=50.45  Aligned_cols=85  Identities=18%  Similarity=0.189  Sum_probs=53.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHC-CCCEE-EEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh--cC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKA-GHPTF-VLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI--KQ   76 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~   76 (263)
                      ||++++|.|.|. |.+|+..++.|.+. +++++ +.+|+     +++.+......  ++..    +   +++++++  .+
T Consensus         2 M~~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~-----~~~~~~~~~~~--g~~~----~---~~~~~~l~~~~   66 (354)
T 3db2_A            2 MYNPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRT-----EDKREKFGKRY--NCAG----D---ATMEALLARED   66 (354)
T ss_dssp             CCCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSS-----HHHHHHHHHHH--TCCC----C---SSHHHHHHCSS
T ss_pred             CCCcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCC-----HHHHHHHHHHc--CCCC----c---CCHHHHhcCCC
Confidence            677789999995 99999999999886 67766 44566     44443222111  1211    2   3445566  46


Q ss_pred             cCEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           77 VDVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        77 ~d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +|+|+.+.....   +..++..+.++|
T Consensus        67 ~D~V~i~tp~~~---h~~~~~~al~~g   90 (354)
T 3db2_A           67 VEMVIITVPNDK---HAEVIEQCARSG   90 (354)
T ss_dssp             CCEEEECSCTTS---HHHHHHHHHHTT
T ss_pred             CCEEEEeCChHH---HHHHHHHHHHcC
Confidence            999998877642   344555566665

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.93  E-value=0.0012  Score=54.94  Aligned_cols=33  Identities=39%  Similarity=0.548  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      .++|.|.| .|.+|+.++..|++.|++|++.+|+
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~   62 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRT   62 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCC
Confidence            47899999 5999999999999999999999988

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.93  E-value=0.0011  Score=55.53  Aligned_cols=92  Identities=16%  Similarity=0.068  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhh----hhhh--ccCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL----LDHF--KKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~--~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ..++|.|+|+ |.+|+.++..|+..|.  ++++++++     .++.+-    +.+.  .......+..  .|.    +.+
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~-----~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----~~~   85 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVI-----EDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----SVT   85 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----GGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCC-----hHHHHHHHHhhhhhhhccCCCeEEEc--CCH----HHh
Confidence            4679999997 9999999999999986  79999987     433331    1111  0111222221  122    258


Q ss_pred             cCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcce
Q 044721           75 KQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        75 ~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~  107 (263)
                      +++|++|.++|...             ....+.+.+.+.+.. .+-
T Consensus        86 ~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a  130 (331)
T 4aj2_A           86 ANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQC  130 (331)
T ss_dssp             TTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTC
T ss_pred             CCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence            89999999999764             122356667777765 443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.93  E-value=0.0018  Score=51.85  Aligned_cols=35  Identities=29%  Similarity=0.463  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .+++|.|.| .|.+|+++++.|++.|++|++.+|++
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~   52 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDP   52 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            468999998 69999999999999999999999983

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.92  E-value=0.0024  Score=46.31  Aligned_cols=84  Identities=20%  Similarity=0.300  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCC---ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +.++|.|.|+|   |.+|+.+++.|.+.|++|+...++.     +..        .++.. .      .++.++.+.+|+
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~-----~~i--------~G~~~-~------~s~~el~~~vDl   72 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-----DEI--------EGLKC-Y------RSVRELPKDVDV   72 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-----SEE--------TTEEC-B------SSGGGSCTTCCE
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC-----CeE--------CCeee-c------CCHHHhCCCCCE
Confidence            46789999987   8999999999999999866544431     000        11111 1      122233347899


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++-+...   .....+++.+.+.+ ++.++.
T Consensus        73 vii~vp~---~~v~~v~~~~~~~g-~~~i~~   99 (138)
T 1y81_A           73 IVFVVPP---KVGLQVAKEAVEAG-FKKLWF   99 (138)
T ss_dssp             EEECSCH---HHHHHHHHHHHHTT-CCEEEE
T ss_pred             EEEEeCH---HHHHHHHHHHHHcC-CCEEEE
Confidence            9888773   35566777788888 888775

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.92  E-value=0.0037  Score=52.01  Aligned_cols=96  Identities=20%  Similarity=0.087  Sum_probs=60.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhh------ccCCcEEEEccCCCHHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHF------KKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~------~~~~~~~~~~D~~~~~~~~~   72 (263)
                      |-++++|.|.|+ |.+|+.++..|++.|+ +|++.+++.     ++.+.. ..+      ......+...  +|   . +
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~-----~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~   68 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAE-----GIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-A   68 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS-----SHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-G
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCc-----hHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-H
Confidence            556689999997 9999999999999998 999999984     232211 000      0011111110  12   2 3


Q ss_pred             HhcCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           73 AIKQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++++|+||.+++...             ....+.+++.+.+.. ...++
T Consensus        69 a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~ii  117 (317)
T 2ewd_A           69 DISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFV  117 (317)
T ss_dssp             GGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEE
Confidence            5789999999997553             122356666666665 44433

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.91  E-value=0.0031  Score=53.28  Aligned_cols=101  Identities=14%  Similarity=0.171  Sum_probs=66.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC--------------Ccchhhh----hhhhccCC--cEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQL----LDHFKKLG--VNLVIG   62 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~----~~~~~~~~--~~~~~~   62 (263)
                      .++|+|.|+ |++|+.+++.|+..|. ++++++++.-..              ...|.+.    +..+ .+.  +..+..
T Consensus       118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~v~~~~~  195 (353)
T 3h5n_A          118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR-NSEISVSEIAL  195 (353)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH-CCCCeEEEeec
Confidence            568999996 9999999999999995 788888764210              0112211    1122 233  556667


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++++..++.+ ++++|+||.+..... .....+-+.+.+.+ ++.+.
T Consensus       196 ~i~~~~~~~~-~~~~DlVvd~~Dn~~-~~r~~ln~~c~~~~-~p~i~  239 (353)
T 3h5n_A          196 NINDYTDLHK-VPEADIWVVSADHPF-NLINWVNKYCVRAN-QPYIN  239 (353)
T ss_dssp             CCCSGGGGGG-SCCCSEEEECCCCST-THHHHHHHHHHHTT-CCEEE
T ss_pred             ccCchhhhhH-hccCCEEEEecCChH-HHHHHHHHHHHHhC-CCEEE
Confidence            7776665666 899999999764332 13344557788888 77665

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.91  E-value=0.0023  Score=54.49  Aligned_cols=75  Identities=25%  Similarity=0.357  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++     +++.+.+..+.   +.. ..|..+.+..+.+.+      
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~lG---a~~-vi~~~~~~~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQ-----ATKRRLAEEVG---ATA-TVDPSAGDVVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----HHHHHHHHHHT---CSE-EECTTSSCHHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHcC---CCE-EECCCCcCHHHHHHhhhhccC
Confidence            4678999997 9999999999999998 78887777     56665555542   222 235544333333322      


Q ss_pred             -CcCEEEEcCCCc
Q 044721           76 -QVDVVISTVGHT   87 (263)
Q Consensus        76 -~~d~vv~~a~~~   87 (263)
                       ++|++|.++|..
T Consensus       252 gg~Dvvid~~G~~  264 (370)
T 4ej6_A          252 GGVDVVIECAGVA  264 (370)
T ss_dssp             TCEEEEEECSCCH
T ss_pred             CCCCEEEECCCCH
Confidence             699999999853

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.90  E-value=0.0058  Score=50.70  Aligned_cols=72  Identities=17%  Similarity=0.225  Sum_probs=48.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh----hhhhh---ccCCcEEEEccCCCHHHHHHHhc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ----LLDHF---KKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |+|.|+|+ |.+|+.++..|+..|.  +|++++++.     ++.+    .+++.   ......+...|  +    .+.++
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~-----~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~   68 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKD-----GMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE   68 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSST-----THHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCch-----HHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC
Confidence            58999996 9999999999999886  899999984     3322    11111   11223333122  1    34688


Q ss_pred             CcCEEEEcCCCcc
Q 044721           76 QVDVVISTVGHTL   88 (263)
Q Consensus        76 ~~d~vv~~a~~~~   88 (263)
                      ++|++|.++|...
T Consensus        69 ~aDvVii~ag~~~   81 (314)
T 3nep_X           69 DSDVCIITAGLPR   81 (314)
T ss_dssp             TCSEEEECCCC--
T ss_pred             CCCEEEECCCCCC
Confidence            9999999999774

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.90  E-value=0.00068  Score=57.78  Aligned_cols=99  Identities=17%  Similarity=0.091  Sum_probs=56.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEE--cCCCCCCcchhhhhhhhc-------cCCcEEEEccCCCHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLV--RESTLSAPSKSQLLDHFK-------KLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~--r~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~   71 (263)
                      |++++|.|.||||++|+.+.+.|.+.. .++..+.  ++...  +...+....+.       .....+...|..  +   
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saG--k~~~~~~~~~~~~~~p~~~~~~~v~~~~~~--~---   89 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAG--KKYKDAASWKQTETLPETEQDIVVQECKPE--G---   89 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTT--SBHHHHCCCCCSSCCCHHHHTCBCEESSSC--T---
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccC--CCHHHhcccccccccccccccceEEeCchh--h---
Confidence            345689999999999999999888765 3565442  32211  11110000000       011222222211  1   


Q ss_pred             HHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           72 KAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                       .++++|++|.+.+..   ....+.+.+.+.| ++.+-.|+
T Consensus        90 -~~~~~Dvvf~alp~~---~s~~~~~~~~~~G-~~VIDlSa  125 (381)
T 3hsk_A           90 -NFLECDVVFSGLDAD---VAGDIEKSFVEAG-LAVVSNAK  125 (381)
T ss_dssp             -TGGGCSEEEECCCHH---HHHHHHHHHHHTT-CEEEECCS
T ss_pred             -hcccCCEEEECCChh---HHHHHHHHHHhCC-CEEEEcCC
Confidence             256899999998754   4566777777888 66444554

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.90  E-value=0.0023  Score=55.06  Aligned_cols=75  Identities=16%  Similarity=0.274  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~   76 (263)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++     +++.+.+..+.   +.. ..|..+.   +.+.++..  +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~~~~lG---a~~-vi~~~~~~~~~~i~~~t~g~g  282 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPS-----EVRRNLAKELG---ADH-VIDPTKENFVEAVLDYTNGLG  282 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----HHHHHHHHHHT---CSE-EECTTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHcC---CCE-EEcCCCCCHHHHHHHHhCCCC
Confidence            3578999998 9999999999999998 78888888     66666555552   222 2344432   33444443  6


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|.++|..
T Consensus       283 ~D~vid~~g~~  293 (404)
T 3ip1_A          283 AKLFLEATGVP  293 (404)
T ss_dssp             CSEEEECSSCH
T ss_pred             CCEEEECCCCc
Confidence            99999999864

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.90  E-value=0.0029  Score=51.79  Aligned_cols=58  Identities=12%  Similarity=0.307  Sum_probs=47.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHH--HHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESL--VKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~d~   79 (263)
                      ..+++++|.|+++-+|+.++..|++.|++|+++.|+..                             ++  ++.++++|+
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~-----------------------------~l~l~~~~~~ADI  213 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS-----------------------------TEDMIDYLRTADI  213 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC-----------------------------HHHHHHHHHTCSE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC-----------------------------CchhhhhhccCCE
Confidence            35789999999888999999999999999998876510                             22  367889999


Q ss_pred             EEEcCCCcc
Q 044721           80 VISTVGHTL   88 (263)
Q Consensus        80 vv~~a~~~~   88 (263)
                      ||+..|...
T Consensus       214 VI~Avg~p~  222 (300)
T 4a26_A          214 VIAAMGQPG  222 (300)
T ss_dssp             EEECSCCTT
T ss_pred             EEECCCCCC
Confidence            999998653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	263
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-18
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-17
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-14
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-08
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-08
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-08
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-08
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-07
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	5e-07
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	5e-07
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	6e-07
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-07
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	9e-07
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-06
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-06
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-06
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	7e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	3e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	7e-04
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	7e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.002

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 79.8 bits (195), Expect = 4e-18
 Identities = 79/125 (63%), Positives = 95/125 (76%), Gaps = 1/125 (0%)

Query: 3   SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST-LSAPSKSQLLDHFKKLGVNLVI 61
           S+S+IL IG TGYIG+ + +AS+  GHPTF+LVREST  S   K+QLL+ FK  G N+V 
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 62  GDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVH 121
           G + +H SLV+A+K VDVVISTVG   +  QV II AIKE G +KRFFPSEFGNDVD VH
Sbjct: 62  GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 121

Query: 122 AVEPA 126
           AVEPA
Sbjct: 122 AVEPA 126

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 76.4 bits (186), Expect = 7e-17
 Identities = 80/151 (52%), Positives = 105/151 (69%), Gaps = 5/151 (3%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           KS++L +GGTGYIGK IV AS+  GHPT+VL R   +S   K Q+L +FK+LG  L+   
Sbjct: 3   KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 62

Query: 64  VLNHESLVKAIKQVDVVISTVGHTLLG----DQVKIIAAIKEAGNIKRFFPSEFGNDVDR 119
           + +H+ LV A+KQVDVVIS +   +L     +Q+K++ AIKEAGNIKRF PSEFG D D 
Sbjct: 63  LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI 122

Query: 120 V-HAVEPAKSAFATKAKIRRAVEAEGIPYTY 149
           + HA++P    F  K K+RRA+EA  IPYTY
Sbjct: 123 MEHALQPGSITFIDKRKVRRAIEAASIPYTY 153

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 68.9 bits (167), Expect = 3e-14
 Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 9/119 (7%)

Query: 4   KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
           K  I  +G TG  G  ++  +   GH     V              +      V L  G 
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS-----LKGLIAEELQAIPNVTLFQGP 57

Query: 64  VLNHESLVKAIKQVD----VVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVD 118
           +LN+  L+  + +      +  ++     +     +  A K AG I+ +  S   +   
Sbjct: 58  LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL 116

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (121), Expect = 2e-08
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 17/155 (10%)

Query: 1   MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           MA K KI   G TG  G   +  +V+AG+   VLVR         S  L        ++V
Sbjct: 1   MAVK-KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR--------DSSRLPSEGPRPAHVV 51

Query: 61  IGDVLNHESLVKAIKQVDVVISTVG--------HTLLGDQVKIIAAIKEAGNIKRFFPSE 112
           +GDVL    + K +   D VI  +G          +      I+AA+K  G  K    + 
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111

Query: 113 FGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY 147
                D        ++      ++ + +   G+ Y
Sbjct: 112 AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKY 146

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 51.5 bits (122), Expect = 3e-08
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           I+  GG G+IG   V           V V +  L+       L+      V LV+GD+ 
Sbjct: 4  NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK-LTYAGNKANLEAILGDRVELVVGDIA 62

Query: 66 NHESLVKA 73
          + E + K 
Sbjct: 63 DAELVDKL 70

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 50.3 bits (119), Expect = 6e-08
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          ++L  GG+GYIG       ++ GH   +L      S  S   +++         V GD+ 
Sbjct: 2  RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN-SKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 66 NHESLVKAIK--QVDVVI 81
          N   + + +    +D VI
Sbjct: 61 NEALMTEILHDHAIDTVI 78

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 50.5 bits (120), Expect = 6e-08
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          KIL  GG G+IG  +V   +K    T V + + T  A +   L D  +    N    D+ 
Sbjct: 2  KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT-YAGNLESLSDISESNRYNFEHADIC 60

Query: 66 NHESLVKAIK--QVDVVI 81
          +   + +  +  Q D V+
Sbjct: 61 DSAEITRIFEQYQPDAVM 78

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 50.1 bits (118), Expect = 7e-08
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLG-VNLVIGDV 64
          K+L  GG G++G  +   ++  G    V      LS    +  L     LG    V GD+
Sbjct: 2  KLLITGGCGFLGSNLASFALSQGIDLIVFDN---LSRKGATDNLHWLSSLGNFEFVHGDI 58

Query: 65 LNHESLVKAIK--QVDVVI 81
           N   + + I     D   
Sbjct: 59 RNKNDVTRLITKYMPDSCF 77

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 49.2 bits (115), Expect = 1e-07
 Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          ++L +G  G+IG  + E  ++  H     +   +    + S+ L+H      + V GD+ 
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS---DAISRFLNHPH---FHFVEGDIS 55

Query: 66 NHESLVKAIKQ 76
           H   ++   +
Sbjct: 56 IHSEWIEYHVK 66

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 49.0 bits (115), Expect = 2e-07
 Identities = 12/66 (18%), Positives = 27/66 (40%)

Query: 5  SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV 64
          S +L  G  G++   +VE  ++ G+      R ++  A  + +    +       V+ D+
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 65 LNHESL 70
          L   + 
Sbjct: 72 LKQGAY 77

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.7 bits (112), Expect = 5e-07
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 5  SK-ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
          SK +L  GG GYIG   V   ++ G+   V    S  +  S ++ L+   K  +     D
Sbjct: 1  SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVLTKHHIPFYEVD 59

Query: 64 VLNHESLVKAIKQVDV 79
          + + + L K  K+  +
Sbjct: 60 LCDRKGLEKVFKEYKI 75

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.6 bits (112), Expect = 5e-07
 Identities = 14/80 (17%), Positives = 22/80 (27%), Gaps = 8/80 (10%)

Query: 1  MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV 60
           +   KI   G  G+I   I       GH       +                       
Sbjct: 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--------DMFCDEFH 63

Query: 61 IGDVLNHESLVKAIKQVDVV 80
          + D+   E+ +K  + VD V
Sbjct: 64 LVDLRVMENCLKVTEGVDHV 83

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 47.2 bits (110), Expect = 6e-07
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 22/78 (28%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
           IL  G TG +G  +  +    G+   + V                          GD  
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEF--------------------CGDFS 41

Query: 66 NHESLVKAIKQV--DVVI 81
          N + + + ++++  DV++
Sbjct: 42 NPKGVAETVRKLRPDVIV 59

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.4 bits (111), Expect = 7e-07
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 4  KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK----SQLLDHFKKLGVNL 59
          +   L  G TG  G ++ E  +  G+    L+R S+     +         +  K  + L
Sbjct: 1  RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60

Query: 60 VIGDVLNHESLVKAIKQ 76
             D+ +  SL + I  
Sbjct: 61 HYADLTDASSLRRWIDV 77

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 47.2 bits (110), Expect = 9e-07
 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKL-GVNLVIGDV 64
          ++   G TG+ G ++       G            +AP+   L +  +   G+   IGD+
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSL----TAPTVPSLFETARVADGMQSEIGDI 65

Query: 65 LNHESLVKAIKQ 76
           +   L+++I++
Sbjct: 66 RDQNKLLESIRE 77

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.5 bits (108), Expect = 1e-06
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 15/86 (17%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVL------------VRESTLSAPSKSQLLDHFK 53
          +++ IGG GY G        K  +   ++              ES     S    +  +K
Sbjct: 3  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 54 KL---GVNLVIGDVLNHESLVKAIKQ 76
           L    + L +GD+ + E L ++ K 
Sbjct: 63 ALTGKSIELYVGDICDFEFLAESFKS 88

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 3  SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI 61
          +K ++   G  G +G  I     + G    VL     L+      + D F    ++ V 
Sbjct: 1  AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVY 59

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 4  KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD 63
          + +IL  GG G++G  + +  +  GH   V+    T    +    + H           +
Sbjct: 1  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHEN--------FE 52

Query: 64 VLNHESLVKAIKQVDVVI 81
          ++NH+ +     +VD + 
Sbjct: 53 LINHDVVEPLYIEVDQIY 70

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 45.2 bits (106), Expect = 3e-06
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTF----VLVRESTLSAPSKSQLLDHFKKLGVNLVI 61
          ++L  GG G+IG   V   +   +P      V+V +S   A +++ L        +  V 
Sbjct: 2  RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 62 GDVLNHESLVKAIKQVDVVI 81
          GD+ +   L + ++ VD ++
Sbjct: 62 GDIRDAGLLARELRGVDAIV 81

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.0 bits (105), Expect = 4e-06
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
            L  G TG  G ++ +  ++ G+    LV     S+ ++ +L +   +  +    GD+ 
Sbjct: 2  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARR--SSDTRWRLRELGIEGDIQYEDGDMA 59

Query: 66 NHESLVK 72
          +  S+ +
Sbjct: 60 DACSVQR 66

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.8 bits (105), Expect = 5e-06
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 5   SKILFI-GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL---DHFKKLGVNLV 60
           SK+  I G TG  G ++ E  ++ G+    + R ++     +   +    H      +L 
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 61  IGDVLNHESLVKAIK--QVDVVISTVGHTLLGDQVK---------------IIAAIKEAG 103
            GD+ +  +L + ++  Q D V +    + +    +               ++ AI+  G
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120

Query: 104 --NIKRFF 109
                RF+
Sbjct: 121 LEKKTRFY 128

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (101), Expect = 1e-05
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 4  KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST-----LSAPSKSQLLDHFKKLGVN 58
            K+L  GG GYIG   V   ++AG+   V+           S P   + +       V 
Sbjct: 2  AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 59 LVIGDVLNH 67
              D+L+ 
Sbjct: 62 FEEMDILDQ 70

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 7e-05
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 6  KILFI-GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVN----LV 60
           +  I G TG  G ++ E  ++ G+    +VR S+     + + L    +  +     L 
Sbjct: 2  NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 61 IGDVLNHESLVKAIKQVD 78
           GD+ +   LVK I +V 
Sbjct: 62 YGDLTDSTCLVKIINEVK 79

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 10/76 (13%), Positives = 19/76 (25%), Gaps = 23/76 (30%)

Query: 6  KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL 65
          KIL  G  G +G+ I +              +                         D+ 
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDIT 39

Query: 66 NHESLVKAIKQVDVVI 81
          N  ++ K   +    +
Sbjct: 40 NVLAVNKFFNEKKPNV 55

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.4 bits (90), Expect = 2e-04
 Identities = 6/34 (17%), Positives = 15/34 (44%)

Query: 3  SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR 36
          +  ++L  G TG  G+ +++  +       V+  
Sbjct: 1  TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 1  MASKSK-ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS---KSQLLDHFKKLG 56
          + ++ K  L  G  G+IG  ++E  +K       L   +T    +      L+   +   
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71

Query: 57 VNLVIGDVLNHESLVKAIKQVD 78
             + GD+ N +    A   VD
Sbjct: 72 FKFIQGDIRNLDDCNNACAGVD 93

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (85), Expect = 7e-04
 Identities = 7/35 (20%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 1  MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLV 35
          M +K  +  +G +G  G+ +++  ++ G  + V +
Sbjct: 12 MQNK-SVFILGASGETGRVLLKEILEQGLFSKVTL 45

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 38.1 bits (86), Expect = 7e-04
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 9/69 (13%)

Query: 7  ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN 66
          I+  GG G+IG  IV+A    G    ++V    L   +K   L           I D ++
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVD--NLKDGTKFVNLVDLN-------IADYMD 52

Query: 67 HESLVKAIK 75
           E  +  I 
Sbjct: 53 KEDFLIQIM 61

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 5/33 (15%), Positives = 12/33 (36%)

Query: 2  ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVL 34
          A+   +L  G +G  G+ + +   +        
Sbjct: 1  ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAK 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	263
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.94
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.94
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.94
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.94
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.93
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.93
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.93
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.93
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.93
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.93
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.93
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.93
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.93
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.93
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.93
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.92
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.92
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.92
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.92
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.92
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.92
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.92
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.92
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.91
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.91
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.91
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.91
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.91
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.91
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.91
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.91
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.9
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.9
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.9
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.89
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.89
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.88
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.88
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.88
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.87
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.87
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.87
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.87
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.86
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.86
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.86
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.85
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.84
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.84
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.84
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.84
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.82
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.82
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.82
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.81
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.81
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.8
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.8
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.8
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.8
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.79
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.79
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.79
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.79
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.79
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.78
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.78
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.78
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.77
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.77
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.77
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.77
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.76
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.76
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.76
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.75
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.72
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.72
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.72
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.72
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.72
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.71
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.7
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.69
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.67
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.67
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.65
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.64
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.62
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.61
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.6
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.45
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.43
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.76
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.49
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.46
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.22
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.15
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.14
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.07
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.02
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.98
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.95
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.91
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.9
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.9
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.9
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.9
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.85
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.81
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.8
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.77
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.76
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.76
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.75
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.74
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.71
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.69
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.68
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.65
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.65
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.64
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.63
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.62
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.61
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.58
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.57
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.55
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.55
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.53
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.52
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.5
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.46
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.43
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.41
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.4
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.38
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.36
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.34
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.34
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.33
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.33
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.31
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.3
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.28
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.27
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.27
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.25
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.24
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.23
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.22
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.21
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.2
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.2
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.17
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.17
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.15
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.14
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.06
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.06
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.03
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.0
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.95
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.95
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.94
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.89
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.84
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.82
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.81
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.78
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.78
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.77
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.75
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.75
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.73
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.72
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.7
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.67
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.63
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.61
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.54
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.53
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.49
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.48
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.47
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.47
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.47
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.42
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.38
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.38
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.35
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.34
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.3
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.25
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.2
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.2
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.18
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.18
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.17
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.15
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.09
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.08
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.04
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.02
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.0
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.99
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.99
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.9
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.87
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.85
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.82
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.8
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.8
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.8
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.66
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.66
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.66
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.65
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.62
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.56
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.47
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.29
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.29
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.25
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.2
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	95.17
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.13
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.04
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.02
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.01
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.97
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.87
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.87
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.7
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.7
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	94.69
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.63
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.62
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.6
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.55
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.51
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.49
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.34
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.28
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	94.26
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.19
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.07
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.02
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.95
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.93
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	93.81
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	93.54
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.5
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.48
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.39
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.26
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	93.15
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.02
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	92.95
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.94
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.86
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.85
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	92.7
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.65
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.63
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	92.62
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.61
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.6
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.53
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.42
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.13
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.7
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.48
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.46
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.45
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.35
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	91.33
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.32
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.19
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	91.18
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.01
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.91
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.75
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	90.62
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.34
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	90.27
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.2
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.1
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	89.89
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.72
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.41
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.28
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.28
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.15
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.07
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	89.02
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.8
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.7
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	88.59
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	88.55
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	88.41
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.25
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	88.19
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.16
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.8
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	86.69
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.6
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	86.49
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.4
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	86.39
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.23
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	86.01
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	85.69
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.42
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.35
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	85.25
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	85.18
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.2
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	84.18
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.92
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	83.78
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.63
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.56
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	83.49
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.4
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	82.59
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.0
d2vjma1	427	Formyl-CoA transferase {Oxalobacter formigenes [Ta	81.7
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	81.29
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.99
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	80.79
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	80.68
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.63
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	80.4
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	80.15

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=8.1e-29  Score=201.40  Aligned_cols=216  Identities=16%  Similarity=0.076  Sum_probs=148.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh----hhhhhccCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ----LLDHFKKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      |+++|+++||||+++||+++++.|+++|++|++++|+..    +..+    .+....+.++..+.+|++|+++++++++ 
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   76 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA----AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCH----HHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            789999999999999999999999999999999999742    2222    1122224578889999999999988875 


Q ss_pred             ------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            ++|++|||||......    ...-++.+.+.                     |....+..+|..+..+.++.+ 
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~~~m~~~~~-  134 (260)
T d1x1ta1          77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILAL---------------------NLSAVFHGTAAALPHMKKQGF-  134 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhc---------------------cccccccccchhhhhHhhcCC-
Confidence                  6999999999765221    11112222222                     224556778888887777654 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHH
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIR  225 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~  225 (263)
                          |+++|++|..             +..+..+...|.++|.+...++|.++.||++++||||+|+||+..++......
T Consensus       135 ----G~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (260)
T d1x1ta1         135 ----GRIINIASAH-------------GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI  197 (260)
T ss_dssp             ----EEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             ----ceEeeccccc-------------ceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh
Confidence                8888877776             55566677889999999988999999999999999999999998877654433


Q ss_pred             H-HHHHcCCCeeEEecc-cccccccCCCCCCCCCCC
Q 044721          226 R-AVEAEGIPYTYVASN-FFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       226 ~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~  259 (263)
                      . ..+..+......... .....+++|+++|+|+|.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~  233 (260)
T d1x1ta1         198 SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG  233 (260)
T ss_dssp             -----------------CHHHHCTTCCCBCHHHHHH
T ss_pred             hhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            2 222222222222222 234568999999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.94  E-value=1.8e-28  Score=198.82  Aligned_cols=215  Identities=13%  Similarity=0.068  Sum_probs=159.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     .++.+.+....+.++..+.+|++|+++++++++      
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADIN-----LEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999998     545443322225678899999999999988775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ..+-++...+.                     |....+..+|..+..++++..    .|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~~~~~~~~~----~g  132 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAI---------------------NVSGTLFMMQAVARAMIAGGR----GG  132 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTS----CE
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhce---------------------eeeccccchhhccchhHHhcc----CC
Confidence             6999999999765221    11222222222                     224556778888888777653    37


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH-HHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR-AVE  229 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~-~~~  229 (263)
                      +++|+++..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+.. ...
T Consensus       133 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~  199 (256)
T d1k2wa_         133 KIINMASQA-------------GRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFAD  199 (256)
T ss_dssp             EEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHH
T ss_pred             ccccccchh-------------hccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhh
Confidence            888777766             556667778899999999889999999999999999999999988877655443 333


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .................+++|+++|+|+|.
T Consensus       200 ~~~~~~~~~~~~~~~~~PlgR~~~p~evA~  229 (256)
T d1k2wa_         200 YENLPRGEKKRQVGAAVPFGRMGRAEDLTG  229 (256)
T ss_dssp             HHTCCTTHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             hccCChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            334333222223344568999999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=8.1e-28  Score=193.77  Aligned_cols=208  Identities=18%  Similarity=0.185  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      |+++|++|||||+++||+++++.|+++|++|++++|+     +++.+..+..   +...+++|++|+++++++++     
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~-----~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-----PEGKEVAEAI---GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----TTHHHHHHHH---TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999998     3344433333   46778999999998888775     


Q ss_pred             --CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|++|||||......    ...-++...+.                     |....+..+|.....+.++.+     
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~~~-----  127 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEV---------------------NLTAPMHLSALAAREMRKVGG-----  127 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHTTTC-----
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHh---------------------hhhhHhhhhhhhccccccccc-----
Confidence              7999999999764211    11122222222                     224566778888877766553     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      |+++|+++..             +..+..+...|..+|++...++|.++.||++++||||+|+||+..++..........
T Consensus       128 G~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~  194 (248)
T d2d1ya1         128 GAIVNVASVQ-------------GLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP  194 (248)
T ss_dssp             EEEEEECCGG-------------GTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC---
T ss_pred             cccccccccc-------------ccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCC
Confidence            8888877766             555667788999999999889999999999999999999999988765433221111


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                          .............+++|+++|+|+|.
T Consensus       195 ----~~~~~~~~~~~~~pl~R~~~pedia~  220 (248)
T d2d1ya1         195 ----DPERTRRDWEDLHALRRLGKPEEVAE  220 (248)
T ss_dssp             ---------CHHHHTTSTTSSCBCHHHHHH
T ss_pred             ----CHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                11112223344568999999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=6.7e-28  Score=193.63  Aligned_cols=199  Identities=16%  Similarity=0.113  Sum_probs=151.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+.+......++..+++|++|+++++++++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999998     555543322224568889999999999888775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ..+-++...+.                     |....+..+|.....+.++.+     |
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~-----G  132 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDV---------------------NLTGVFLGIRAVVKPMKEAGR-----G  132 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----E
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhc---------------------ccchhhHHHHHHHhHHHhcCc-----c
Confidence             6899999999865221    11112222222                     224567778888877777664     8


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|++|..             +..+..+...|..+|++...++|.++.||++++||||+|+||+..++..+.+      
T Consensus       133 ~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~------  193 (244)
T d1nffa_         133 SIINISSIE-------------GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV------  193 (244)
T ss_dssp             EEEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS------
T ss_pred             eEEeccccc-------------cccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh------
Confidence            888877776             5556667788999999999999999999999999999999998877653211      


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                               .+.....+++|+++|+|+|.
T Consensus       194 ---------~~~~~~~pl~R~~~p~diA~  213 (244)
T d1nffa_         194 ---------PEDIFQTALGRAAEPVEVSN  213 (244)
T ss_dssp             ---------CTTCSCCSSSSCBCHHHHHH
T ss_pred             ---------hHHHHhccccCCCCHHHHHH
Confidence                     12344568999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.4e-28  Score=194.30  Aligned_cols=204  Identities=17%  Similarity=0.141  Sum_probs=153.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++.+.+..+.++..+.+|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATS-----ENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            478999999999999999999999999999999998     555543333335567889999999999888775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ..+-++...+.                     |...++..+|..+..+.++.+     |
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~-----G  130 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIET---------------------NLSSVFRLSKAVMRAMMKKRH-----G  130 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----E
T ss_pred             CCcceehhhhhhccccccccccccccccccce---------------------eechhhhhHHHHHHHHHHcCC-----C
Confidence             6999999999775221    11112222222                     225567789988888887764     8


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+..... 
T Consensus       131 ~II~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~-  196 (243)
T d1q7ba_         131 RIITIGSVV-------------GTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR-  196 (243)
T ss_dssp             EEEEECCHH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH-
T ss_pred             Eeeeecchh-------------hcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHH-
Confidence            999988877             444555677899999999999999999999999999999999887765332211111 


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                               .......+++|+++|+|+|.
T Consensus       197 ---------~~~~~~~pl~R~~~pedvA~  216 (243)
T d1q7ba_         197 ---------AGILAQVPAGRLGGAQEIAN  216 (243)
T ss_dssp             ---------HHHHTTCTTSSCBCHHHHHH
T ss_pred             ---------HHHHhcCCCCCCCCHHHHHH
Confidence                     11233457899999998864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.93  E-value=5.5e-27  Score=188.92  Aligned_cols=207  Identities=17%  Similarity=0.100  Sum_probs=145.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|++.   ++..+.++.. +.++..+.+|++|+++++++++      
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~---~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA---PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch---HHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999843   1122222332 5678899999999999888765      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ..+-++...+.                     |....+..+|..+..+.++.+     |
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~-----G  132 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEI---------------------NVDSGFLMAKAFVPGMKRNGW-----G  132 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----E
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhhee---------------------ehhhhhHHHHHHHhHHHhcCC-----C
Confidence             7999999999865221    11222222222                     225567778888888877764     8


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++..+....   .
T Consensus       133 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~---~  196 (247)
T d2ew8a1         133 RIINLTSTT-------------YWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL---S  196 (247)
T ss_dssp             EEEEECCGG-------------GGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------
T ss_pred             Cccccccch-------------hcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc---c
Confidence            888877776             555666778899999999889999999999999999999999877654332111   1


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ....     ...-...+++|+++|+|+|.
T Consensus       197 ~~~~-----~~~~~~~~l~r~~~pedvA~  220 (247)
T d2ew8a1         197 AMFD-----VLPNMLQAIPRLQVPLDLTG  220 (247)
T ss_dssp             ------------CTTSSSCSCCCTHHHHH
T ss_pred             hhHH-----HHHHHhccCCCCCCHHHHHH
Confidence            1000     00111236889999998864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.93  E-value=4.8e-28  Score=196.33  Aligned_cols=212  Identities=14%  Similarity=0.102  Sum_probs=151.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh----ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF----KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+.. ..+    .+.++..+++|++|+++++++++ 
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~   76 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA   76 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999999     4443321 111    23467889999999999888765 


Q ss_pred             ------CcCEEEEcCCCccc-h----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcC
Q 044721           76 ------QVDVVISTVGHTLL-G----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEG  144 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~-~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~  144 (263)
                            ++|++|||||.... .    ....-++...+.                     |....+..+|.....+.++.+
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~~~m~~~~~  135 (258)
T d1iy8a_          77 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSI---------------------NLRGVFLGLEKVLKIMREQGS  135 (258)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhh---------------------hccchhhhhhhhHhhhhhhcC
Confidence                  79999999996531 1    111122222222                     224567778877777766654


Q ss_pred             CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHH
Q 044721          145 IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKI  224 (263)
Q Consensus       145 ~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~  224 (263)
                           |+++|++|..             +..+..+...|.++|.+...++|.++.||++++||||+|+||+..++.....
T Consensus       136 -----G~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~  197 (258)
T d1iy8a_         136 -----GMVVNTASVG-------------GIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS  197 (258)
T ss_dssp             -----CEEEEECCGG-------------GTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH
T ss_pred             -----CCCcccccHh-------------hccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHH
Confidence                 7788777766             5556677889999999999999999999999999999999999877665433


Q ss_pred             HHHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          225 RRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ........  ............+++|+++|+|+|.
T Consensus       198 ~~~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~  230 (258)
T d1iy8a_         198 MKQLDPEN--PRKAAEEFIQVNPSKRYGEAPEIAA  230 (258)
T ss_dssp             HHHHCTTC--HHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             HhhcCccc--HHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            22211111  1111112334468899999998764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=2.6e-27  Score=191.26  Aligned_cols=204  Identities=18%  Similarity=0.203  Sum_probs=149.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+. .+++.  +.++..+.+|++|+++++++++   
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998     444332 22232  3468889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||......    ...-++...+.                     |....+..+|..+..+.++.+   
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~---  138 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRT---------------------NLNSLFYITQPISKRMINNRY---  138 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH---------------------HTTHHHHHHHHHHHHHHHHTC---
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhhee---------------------eehhhhhhhhhcCcccccCCC---
Confidence                7999999999765221    11122222222                     225567789988888887764   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                        |+++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+...
T Consensus       139 --G~IVnisS~~-------------~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~  203 (251)
T d2c07a1         139 --GRIINISSIV-------------GLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ  203 (251)
T ss_dssp             --EEEEEECCTH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH
T ss_pred             --eEEEEECCHH-------------hcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH
Confidence              8999888776             4444556788999999999999999999999999999999998877654322111


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..          .......+++|+++|+|+|.
T Consensus       204 ~~----------~~~~~~~pl~R~~~pedvA~  225 (251)
T d2c07a1         204 IK----------KNIISNIPAGRMGTPEEVAN  225 (251)
T ss_dssp             HH----------HHHHTTCTTSSCBCHHHHHH
T ss_pred             HH----------HHHHhcCCCCCCcCHHHHHH
Confidence            11          12233458899999998864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.93  E-value=7.6e-27  Score=189.53  Aligned_cols=214  Identities=14%  Similarity=0.104  Sum_probs=155.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+.+ +.+.  +.++..+.+|++|+++++++++   
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   77 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVV   77 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998     4443322 2222  3468889999999998888775   


Q ss_pred             ----CcCEEEEcCCCccc-h----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ----QVDVVISTVGHTLL-G----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~-~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                          ++|++|||||.... .    ....-++...+.+                     ....+..+|..+..+.++.+  
T Consensus        78 ~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vn---------------------l~~~~~~~~~~~~~m~~~~~--  134 (260)
T d1zema1          78 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTIN---------------------VTGAFHVLKAVSRQMITQNY--  134 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC--
T ss_pred             HHhCCCCeehhhhccccccCccccccHHHHHhhcccc---------------------ccccccchhhHHhhhhhhcC--
Confidence                79999999997531 1    1112222222222                     24567778988888887765  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++.......
T Consensus       135 ---G~II~isS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~  198 (260)
T d1zema1         135 ---GRIVNTASMA-------------GVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQV  198 (260)
T ss_dssp             ---EEEEEECCHH-------------HHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHH
T ss_pred             ---CCCCeeechh-------------hccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcch
Confidence               8999988877             444556678899999999999999999999999999999999988776543332


Q ss_pred             HHH-HcCCCee-----EEecccccccccCCCCCCCCCCC
Q 044721          227 AVE-AEGIPYT-----YVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ... .......     .+........|++|+++|+|+|.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~  237 (260)
T d1zema1         199 ELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPG  237 (260)
T ss_dssp             HHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHH
T ss_pred             hhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            222 1111111     11122334568999999999874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.93  E-value=3.7e-27  Score=190.93  Aligned_cols=212  Identities=19%  Similarity=0.182  Sum_probs=151.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      |+++||||+++||+++++.|+++|++|++++|+     +++.+. .+++.  +.++..+++|++|+++++++++      
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            567999999999999999999999999999998     444432 22222  3568889999999999888765      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ..+-++.+.+.+                     ....+..+|..+..+.++..    .+
T Consensus        77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN---------------------l~g~~~~~~~~~~~m~~~~~----~g  131 (255)
T d1gega_          77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNIN---------------------VKGVIWGIQAAVEAFKKEGH----GG  131 (255)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTS----CE
T ss_pred             CCccEEEecccccccCcHHHhhhhhhhhhhhhc---------------------ccchhhhhhhhcchhhhhcc----cc
Confidence             7999999999764211    112222222222                     24456778888877776543    25


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH-H
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV-E  229 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~-~  229 (263)
                      +++++++..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+.+.. +
T Consensus       132 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~  198 (255)
T d1gega_         132 KIINACSQA-------------GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSE  198 (255)
T ss_dssp             EEEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHH
T ss_pred             ccccccchh-------------hcccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHh
Confidence            555555544             45566677889999999888999999999999999999999998887765554333 2


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ..+..............+++|+++|+|+|.
T Consensus       199 ~~~~~~~~~~~~~~~~~pl~R~~~peevA~  228 (255)
T d1gega_         199 AAGKPLGYGTAEFAKRITLGRLSEPEDVAA  228 (255)
T ss_dssp             HHTCCTTHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             hhcccchhHHHHHHhcCCCCCCcCHHHHHH
Confidence            233332222333455678999999999874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.93  E-value=5.2e-27  Score=189.48  Aligned_cols=203  Identities=19%  Similarity=0.171  Sum_probs=150.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +++|+++||||+++||++++++|+++|++|++++|+     +++.+.. +++ +.++..+++|++|+++++++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998     4444432 333 4568899999999999988775     


Q ss_pred             --CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 --QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                        ++|++|||||......    ...-++...+.                     |....+..+|..+..+.++.+     
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~v---------------------N~~~~~~~~~~~~p~m~~~~~-----  130 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEI---------------------NLTGVFIGMKTVIPAMKDAGG-----  130 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----
T ss_pred             cCCccEEEecCccccccccccccccccchhhhH---------------------HhhHHHHHHHHHHHHHhhcCC-----
Confidence              7999999999865211    11112222221                     224567778888877776654     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      |+++|++|..             +..+..+...|.++|.+...++|.++.||++++||||+|+||+..++.....    .
T Consensus       131 G~II~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~----~  193 (254)
T d1hdca_         131 GSIVNISSAA-------------GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET----G  193 (254)
T ss_dssp             EEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH----T
T ss_pred             Ceecccccch-------------hcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhc----C
Confidence            8888877776             5555667788999999998899999999999999999999998877543321    1


Q ss_pred             HcCCCeeEEecccccccccCCCC-CCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLS-QPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~  259 (263)
                      ...      ........+++|++ +|+|+|.
T Consensus       194 ~~~------~~~~~~~~pl~R~g~~PedvA~  218 (254)
T d1hdca_         194 IRQ------GEGNYPNTPMGRVGNEPGEIAG  218 (254)
T ss_dssp             CCC------STTSCTTSTTSSCB-CHHHHHH
T ss_pred             HHH------HHHHHhCCCCCCCCCCHHHHHH
Confidence            111      12344567899997 6888764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.93  E-value=3.7e-27  Score=191.22  Aligned_cols=214  Identities=19%  Similarity=0.153  Sum_probs=152.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .+|++|||||+++||+++++.|+++|++|++++|+     +++.+ ..+++.  +.++..+++|++|+++++++++    
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   75 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999998     44433 222222  3468889999999999988775    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHH-HHHcCCCE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRA-VEAEGIPY  147 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~-~~~~~~~~  147 (263)
                         ++|++|||||......    ..+-++...+.                     |....++.+|..+..+ +++.+   
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~p~~~~~~~~---  131 (257)
T d2rhca1          76 RYGPVDVLVNNAGRPGGGATAELADELWLDVVET---------------------NLTGVFRVTKQVLKAGGMLERG---  131 (257)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHTTTSHHHHT---
T ss_pred             HhCCCCEEEecccccCCCChHHcCHHHHHHHHHH---------------------HhhhhhHHHHHHhHHHHHHhcC---
Confidence               6999999999765221    11112222221                     2245566677776642 22222   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                       .|+++|+.+..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++....+...
T Consensus       132 -~g~Ii~i~S~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  197 (257)
T d2rhca1         132 -TGRIVNIASTG-------------GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH  197 (257)
T ss_dssp             -EEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHH
T ss_pred             -Ccccccccccc-------------cccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhh
Confidence             46777666655             5556677788999999988899999999999999999999999888776555433


Q ss_pred             H-HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 V-EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      . ...+..............+++|+++|+|+|.
T Consensus       198 ~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~  230 (257)
T d2rhca1         198 YSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE  230 (257)
T ss_dssp             HHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             hhhhcccChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            2 2233333223333445678999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.7e-27  Score=189.62  Aligned_cols=206  Identities=16%  Similarity=0.144  Sum_probs=149.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   78 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++.+... ..++..+.+|++|+++++++++   ++|
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~l~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~g~iD   78 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVRE-CPGIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEEeCCCHHHHHHHHHHhCCce
Confidence            368999999999999999999999999999999998     4444432221 2467889999999999998886   689


Q ss_pred             EEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           79 VVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        79 ~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ++|||||......    ..+-++...+.+                     ....+..+|..+..++++.+    .|+++|
T Consensus        79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vn---------------------l~~~~~~~~~~~~~~~~~~~----~g~Ii~  133 (244)
T d1pr9a_          79 LLVNNAAVALLQPFLEVTKEAFDRSFEVN---------------------LRAVIQVSQIVARGLIARGV----PGAIVN  133 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----CEEEEE
T ss_pred             EEEeccccccccchhhhhHHHHHHHHHHh---------------------hhhhhHHHHHhhhHHHHhCC----cceEee
Confidence            9999999875221    112222222222                     14456778888888777654    477777


Q ss_pred             chhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCC
Q 044721          155 HGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIP  234 (263)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +++..             +..+......|..+|.+...++|.++.||++++||||+|+||+..++.........+     
T Consensus       134 isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~-----  195 (244)
T d1pr9a_         134 VSSQC-------------SQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH-----  195 (244)
T ss_dssp             ECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHH-----
T ss_pred             ccccc-------------ccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChH-----
Confidence            77666             555666778899999999889999999999999999999999877664322110000     


Q ss_pred             eeEEecccccccccCCCCCCCCCCC
Q 044721          235 YTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                         .........+++|+++|+|+|.
T Consensus       196 ---~~~~~~~~~pl~R~~~peevA~  217 (244)
T d1pr9a_         196 ---KAKTMLNRIPLGKFAEVEHVVN  217 (244)
T ss_dssp             ---HHHHHHTTCTTCSCBCHHHHHH
T ss_pred             ---HHHHHHhcCCCCCCcCHHHHHH
Confidence               0011233457899999998764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=2.3e-27  Score=191.55  Aligned_cols=207  Identities=16%  Similarity=0.164  Sum_probs=143.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     .++.+ ..+++   .+.++..+.+|++|+++++++++  
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   77 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999998     33322 11222   24568889999999999888775  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||......    ..+-++...+.                     |....+..+|..+..+.++.+  
T Consensus        78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~--  134 (251)
T d1vl8a_          78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV---------------------NLFGTYYVCREAFSLLRESDN--  134 (251)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHTTCSS--
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHh---------------------hhhhhhhhhhhhhhccccccc--
Confidence                 6999999999764211    11112222221                     224456667777766554443  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|+.|...            ...+..+...|..+|++...++|.++.||++++||||+|+||+..++.......
T Consensus       135 ---G~Ii~i~S~~~------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~  199 (251)
T d1vl8a_         135 ---PSIINIGSLTV------------EEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS  199 (251)
T ss_dssp             ---CEEEEECCGGG------------TCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT
T ss_pred             ---ccccccccchh------------ccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC
Confidence               56666554431            233455667788888888889999999999999999999999887766543321


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .-+.        ........+++|+++|+|+|.
T Consensus       200 ~~~~--------~~~~~~~~pl~R~~~pedvA~  224 (251)
T d1vl8a_         200 DPEK--------LDYMLKRIPLGRTGVPEDLKG  224 (251)
T ss_dssp             CHHH--------HHHHHHTCTTSSCBCGGGGHH
T ss_pred             CHHH--------HHHHHhcCCCCCCCCHHHHHH
Confidence            1000        011233468899999999874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=3.8e-27  Score=188.57  Aligned_cols=196  Identities=17%  Similarity=0.144  Sum_probs=142.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+...             ..++..+++|++|+++++++++      
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998432             1346778999999999888775      


Q ss_pred             -CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||.......    .+-++...+                     .|....+..+|..+..+.++.+     |
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~---------------------vNl~~~~~~~~~~~~~m~~~~~-----g  125 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVIN---------------------ANLTGAFRVAQRASRSMQRNKF-----G  125 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHH---------------------HHTHHHHHHHHHHHHHHHHTTC-----E
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHH---------------------hhhhhhhhhhhhhhhcccccCC-----C
Confidence             69999999997652211    111222222                     2224567778888888776664     7


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||...++....+......
T Consensus       126 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~  192 (237)
T d1uzma1         126 RMIFIGSVS-------------GLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQ  192 (237)
T ss_dssp             EEEEECCCC-------------C-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHH
T ss_pred             ceEEEcchh-------------hccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHH
Confidence            877776655             4455567788999999998899999999999999999999999877654432211111


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                                ......+++|+++|+|+|.
T Consensus       193 ----------~~~~~~pl~R~~~pedvA~  211 (237)
T d1uzma1         193 ----------GALQFIPAKRVGTPAEVAG  211 (237)
T ss_dssp             ----------HHGGGCTTCSCBCHHHHHH
T ss_pred             ----------HHHhcCCCCCCcCHHHHHH
Confidence                      1233468899999998864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-27  Score=189.11  Aligned_cols=208  Identities=18%  Similarity=0.173  Sum_probs=148.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+.+.+. .+++..+.+|++|+++++++++      
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998     5555433332 2467889999999999988775      


Q ss_pred             -CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 -QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 -~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                       ++|++|||||....     +...+-++...+.                     |....+..+|..+..+.+. +     
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~-~-----  130 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLEL---------------------NLLGTYTLTKLALPYLRKS-Q-----  130 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHH-T-----
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHH---------------------hhhhHHHHHHHhhHHHHhC-C-----
Confidence             69999999996531     1111222222222                     2245567788877766543 3     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      |+++|++|..             +..+......|..+|++...++|.++.||++++||||+|+||+..++....+...  
T Consensus       131 G~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~--  195 (250)
T d1ydea1         131 GNVINISSLV-------------GAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL--  195 (250)
T ss_dssp             CEEEEECCHH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT--
T ss_pred             CCCccccccc-------------ccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhc--
Confidence            6788877776             3344566789999999999999999999999999999999998877654332110  


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       .+- ............+++|+++|+|+|.
T Consensus       196 -~~~-~~~~~~~~~~~~pl~R~g~p~eva~  223 (250)
T d1ydea1         196 -MPD-PRASIREGMLAQPLGRMGQPAEVGA  223 (250)
T ss_dssp             -SSS-HHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred             -CCC-HHHHHHHHHhcCCCCCCCCHHHHHH
Confidence             000 0000112334558899999998864

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.2e-26  Score=186.28  Aligned_cols=206  Identities=17%  Similarity=0.151  Sum_probs=146.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---CcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---QVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d   78 (263)
                      +++|++|||||+++||+++++.|+++|++|++++|+     +++.+.+... ..++..+.+|++|+++++++++   ++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~g~iD   76 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAKE-CPGIEPVCVDLGDWDATEKALGGIGPVD   76 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence            468999999999999999999999999999999998     4444432221 2468889999999999999887   689


Q ss_pred             EEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           79 VVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        79 ~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ++|||||......    ...-++...+.+                     ....+..+|.....++++..    .|+++|
T Consensus        77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vn---------------------l~~~~~~~~~~~~~~~~~~~----~g~ii~  131 (242)
T d1cyda_          77 LLVNNAALVIMQPFLEVTKEAFDRSFSVN---------------------LRSVFQVSQMVARDMINRGV----PGSIVN  131 (242)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----CEEEEE
T ss_pred             EEEECCccccchhHHHHHHHHHHHHHHHH---------------------hccchHHHHHhchhhhhhcc----cCcccc
Confidence            9999999765221    111122222221                     13456668877777665543    267777


Q ss_pred             chhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCC
Q 044721          155 HGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIP  234 (263)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +++..             +..+..+...|..+|++...++|.++.||++++||||+|+||+..++........   .   
T Consensus       132 isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~---~---  192 (242)
T d1cyda_         132 VSSMV-------------AHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD---P---  192 (242)
T ss_dssp             ECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC---H---
T ss_pred             cchhh-------------ccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC---H---
Confidence            66655             4555667788999999988899999999999999999999998877643322100   0   


Q ss_pred             eeEEecccccccccCCCCCCCCCCC
Q 044721          235 YTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                        ..........+++|+++|+|+|.
T Consensus       193 --~~~~~~~~~~pl~R~~~peeva~  215 (242)
T d1cyda_         193 --EFARKLKERHPLRKFAEVEDVVN  215 (242)
T ss_dssp             --HHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             --HHHHHHHhcCCCCCCcCHHHHHH
Confidence              00011223357899999998764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.92  E-value=4.2e-27  Score=190.96  Aligned_cols=208  Identities=16%  Similarity=0.153  Sum_probs=143.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+    ++.+ ..+.+.  +.++..+++|++|+++++++++   
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~----~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE----DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999842    1222 222221  3467889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||......    ..+-++...+.                     |....+..+|..+..+.++..-  
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~~~m~~~~~g--  137 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDT---------------------NLTGAFLGSREAIKYFVENDIK--  137 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHTTCC--
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHH---------------------hcccchhHHHHHhhhhcccccc--
Confidence                7999999999865211    11112222222                     2244566688877777765431  


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                        +.++|+++..             +..+..+...|..+|++...++|.++.||++++||||+|+||+..++........
T Consensus       138 --~~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~  202 (261)
T d1geea_         138 --GTVINMSSVH-------------EKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD  202 (261)
T ss_dssp             --CEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS
T ss_pred             --ccccccccch-------------hcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC
Confidence              2244444443             4455667788888998888899999999999999999999998877664332211


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      -+..        .......+++|+++|+|+|.
T Consensus       203 ~~~~--------~~~~~~~pl~R~~~pediA~  226 (261)
T d1geea_         203 PEQR--------ADVESMIPMGYIGEPEEIAA  226 (261)
T ss_dssp             HHHH--------HHHHTTCTTSSCBCHHHHHH
T ss_pred             HHHH--------HHHHhcCCCCCCCCHHHHHH
Confidence            0000        11223458899999998864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=7e-27  Score=189.07  Aligned_cols=204  Identities=15%  Similarity=0.139  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc----
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+     +++.+. .+++.  +.++..+++|++|+++++++++    
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999998     444332 22222  4568889999999998887765    


Q ss_pred             ---CcCEEEEcCCCccchh---HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           76 ---QVDVVISTVGHTLLGD---QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~---~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                         ++|++|||||......   ...-++...+                     .|....+..+|..+..+.++.+     
T Consensus        85 ~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~---------------------vNl~~~~~~~~~~~~~m~~~~~-----  138 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYE---------------------LNVFSFFHLSQLVAPEMEKNGG-----  138 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH---------------------HHTHHHHHHHHHHHHHHHHHTC-----
T ss_pred             HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHH---------------------HHHHHhhhhHHHHHhhhccccc-----
Confidence               7999999999764211   1111222222                     2224567778888888887765     


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHH
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVE  229 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~  229 (263)
                      |+++|+++..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++.......   
T Consensus       139 g~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---  202 (255)
T d1fmca_         139 GVILTITSMA-------------AENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---  202 (255)
T ss_dssp             EEEEEECCGG-------------GTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC---
T ss_pred             cccccccccc-------------hhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC---
Confidence            6777766655             555667788999999999999999999999999999999999877654321100   


Q ss_pred             HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          230 AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ++      .........+++|+++|+|+|.
T Consensus       203 ~e------~~~~~~~~~pl~R~g~pedvA~  226 (255)
T d1fmca_         203 PE------IEQKMLQHTPIRRLGQPQDIAN  226 (255)
T ss_dssp             HH------HHHHHHHTCSSCSCBCHHHHHH
T ss_pred             HH------HHHHHHhcCCCCCCcCHHHHHH
Confidence            00      0011223457899999998764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.92  E-value=1e-26  Score=188.66  Aligned_cols=209  Identities=17%  Similarity=0.189  Sum_probs=147.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+ ..+++.  +.++..+.+|++|+++++++++   
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998     44433 223332  3457788999999998887663   


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||......    ..+-++...+.                     |....+..+|.....+.++.+  
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~--  137 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI---------------------NFEAAYHLSVLAHPFLKASER--  137 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHTSS--
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHHHHHhc---------------------ccceeEEEEeeccchhhhhcc--
Confidence                 4899999999765221    11112222222                     224556677877766666554  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|++|..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++.......
T Consensus       138 ---G~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  201 (259)
T d2ae2a_         138 ---GNVVFISSVS-------------GALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ  201 (259)
T ss_dssp             ---EEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT
T ss_pred             ---cccccccccc-------------cccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhh
Confidence               7888877766             555666778899999999889999999999999999999999887765433221


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .....+     .........+++|+++|+|+|.
T Consensus       202 ~~~~~~-----~~~~~~~~~pl~R~g~pedvA~  229 (259)
T d2ae2a_         202 DPEQKE-----NLNKLIDRCALRRMGEPKELAA  229 (259)
T ss_dssp             SHHHHH-----HHHHHHHTSTTCSCBCHHHHHH
T ss_pred             chhhHH-----HHHHHHhcCCCCCCcCHHHHHH
Confidence            111000     0011223468899999998764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.92  E-value=7e-27  Score=187.88  Aligned_cols=202  Identities=21%  Similarity=0.153  Sum_probs=147.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh--ccCCcEEEEccCCCHHHHHHHhc------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF--KKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      ++++||||+++||+++++.|+++|++|++.+++.    ++..+.+ +.+  .+.++..+++|++|+++++++++      
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999877653    2233222 222  14567889999999999888765      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.                     |....+..+|..++.|.++.+     |
T Consensus        78 g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~v---------------------Nl~~~~~~~~~~~~~m~~~~~-----G  131 (244)
T d1edoa_          78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDL---------------------NLTGVFLCTQAATKIMMKKRK-----G  131 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----E
T ss_pred             CCCCccccccccccccchhccchHHHHHHHhh---------------------hhhhHHHHHHHHHHHHHHcCC-----c
Confidence             6999999999875221    11222222222                     224567779998888887765     8


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      +++|++|..             +..+..+...|..+|.+...++|.++.||++++||||+|+||+..++....+.....+
T Consensus       132 ~IVnisS~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~  198 (244)
T d1edoa_         132 RIINIASVV-------------GLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEK  198 (244)
T ss_dssp             EEEEECCTH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHH
T ss_pred             EEEEEcChh-------------hcCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHH
Confidence            999988877             3445566788999999999999999999999999999999998877654332111111


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                                ......+++|+++|+|+|.
T Consensus       199 ----------~~~~~~pl~R~~~p~dvA~  217 (244)
T d1edoa_         199 ----------KILGTIPLGRTGQPENVAG  217 (244)
T ss_dssp             ----------HHHTSCTTCSCBCHHHHHH
T ss_pred             ----------HHHhcCCCCCCcCHHHHHH
Confidence                      1223467899999998764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=2.8e-26  Score=185.91  Aligned_cols=205  Identities=17%  Similarity=0.160  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++ ..+.+.  ..++..+.+|++++++++++++   
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN-----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998     44433 222222  3468889999999988877663   


Q ss_pred             -----CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           .+|++|||||.......    .+-++...+                     .|....+..+|.....+.++.+  
T Consensus        81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~---------------------vNl~g~~~~~~~~~~~m~~~~~--  137 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS---------------------TNLESAYHLSQLAHPLLKASGC--  137 (259)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHSS--
T ss_pred             HHhCCCcccccccccccCCCchhhCCHHHHHHHHH---------------------HHhhhheeeehhhhhccccccc--
Confidence                 48999999997642111    111111111                     1113456678877776666554  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++|+++..             +..+......|.++|.+...++|.++.||++++||||+|+||+..++...... 
T Consensus       138 ---G~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~-  200 (259)
T d1xq1a_         138 ---GNIIFMSSIA-------------GVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-  200 (259)
T ss_dssp             ---CEEEEEC-----------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------
T ss_pred             ---cccccccccc-------------ccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc-
Confidence               7777777666             44444556679999999888999999999999999999999988776543221 


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                        ..+      .........+++|+++|+|+|.
T Consensus       201 --~~~------~~~~~~~~~pl~R~~~pedvA~  225 (259)
T d1xq1a_         201 --DDE------FKKVVISRKPLGRFGEPEEVSS  225 (259)
T ss_dssp             -------------------------CCGGGGHH
T ss_pred             --hHH------HHHHHHhCCCCCCCcCHHHHHH
Confidence              111      1112233468999999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=5.9e-26  Score=182.21  Aligned_cols=201  Identities=19%  Similarity=0.134  Sum_probs=137.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+...+  ..++..+.+|++|+++++++++      
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREAAE--AVGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--TTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH--HcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            478999999999999999999999999999999998     444443222  3367889999999999988775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.+                     ....+..+|..+..+.++.+     +
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN---------------------l~~~~~~~~~~~~~m~~~~~-----~  129 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVN---------------------LTGSFLVAKAASEAMREKNP-----G  129 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHTTTCC-----E
T ss_pred             CCceEEEECCcccccCchhhCcchhhhcccccc---------------------chhhhhhhhhcccccccccc-----c
Confidence             6999999999765211    111122222111                     13456667776666554433     3


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      ++.+.++              ....+..+...|.++|.+...++|.++.||++++||||+|+||+..++.......... 
T Consensus       130 ~i~~~ss--------------~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~-  194 (242)
T d1ulsa_         130 SIVLTAS--------------RVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR-  194 (242)
T ss_dssp             EEEEECC--------------GGGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH-
T ss_pred             eeeeecc--------------ccccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH-
Confidence            3332222              1233445567788888888889999999999999999999999876654321111111 


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                               .......+++|+++|+|+|.
T Consensus       195 ---------~~~~~~~pl~R~~~pedia~  214 (242)
T d1ulsa_         195 ---------EKAIAATPLGRAGKPLEVAY  214 (242)
T ss_dssp             ---------HHHHHTCTTCSCBCHHHHHH
T ss_pred             ---------HHHHhcCCCCCCCCHHHHHH
Confidence                     11223457889999988764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.92  E-value=2.6e-26  Score=187.95  Aligned_cols=212  Identities=17%  Similarity=0.119  Sum_probs=142.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++.+....+.++..+.+|++++++++++++      
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS-----AERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999998     555443332235578899999999998888765      


Q ss_pred             -CcCEEEEcCCCccch---------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 -QVDVVISTVGHTLLG---------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~---------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                       ++|++|||||.....         .....++...+.                     |....+..+|..+..+.++.  
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~~--  134 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHI---------------------NVKGYIHAVKACLPALVASR--  134 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHT--
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHH---------------------hhHHHHHHHHHHHHHHHhcC--
Confidence             799999999975311         111112222222                     22455677888887776654  


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHH
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIR  225 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~  225 (263)
                          |++++..+..             +..+..+...|.++|++...++|.++.||++. ||||+|+||+..++...+..
T Consensus       135 ----g~iI~i~S~~-------------~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~  196 (276)
T d1bdba_         135 ----GNVIFTISNA-------------GFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSS  196 (276)
T ss_dssp             ----CEEEEECCGG-------------GTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGG
T ss_pred             ----CCceeeeech-------------hccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccc
Confidence                3444443333             34455667789999999988999999999975 99999999987665321111


Q ss_pred             HHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          226 RAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .....+...............+++|+++|+|+|.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~  230 (276)
T d1bdba_         197 LGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTG  230 (276)
T ss_dssp             GC---------CHHHHHTTTCTTSSCCCGGGGSH
T ss_pred             hhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            0000000000001111223468999999999875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.91  E-value=3.8e-26  Score=185.45  Aligned_cols=216  Identities=16%  Similarity=0.155  Sum_probs=144.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|++|||||+++||+++++.|+++|++|++++|+..... +..+.+....+.++..+++|++|+++++++++      
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~-~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV-EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH-HHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999999954321 11111111124678899999999999888775      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.+                     ....+..+|..+..++++.+    .+
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N---------------------~~g~~~~~~~~~~~m~~~~~----~g  140 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVN---------------------VFGVFNTCRAVAKLWLQKQQ----KG  140 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC----CE
T ss_pred             CCCcEecccccccccCCHHHhcccccccccccc---------------------ccchhhhhhhhccccccccc----ce
Confidence             6999999999764221    111122222222                     24456778888888876654    24


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      ++.+..+.......      ........+...|.++|++...++|.++.||++++||||+|+||+..++....+......
T Consensus       141 ~i~~~~s~~~~~~~------~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~  214 (260)
T d1h5qa_         141 SIVVTSSMSSQIIN------QSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD  214 (260)
T ss_dssp             EEEEECCGGGTSCC------EEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH
T ss_pred             EEEEeecccccccc------ccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHH
Confidence            44433222210000      001123345678999999999999999999999999999999998776553322111110


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                                ......+++|+++|+|+|.
T Consensus       215 ----------~~~~~~pl~R~g~pedvA~  233 (260)
T d1h5qa_         215 ----------HQASNIPLNRFAQPEEMTG  233 (260)
T ss_dssp             ----------HHHHTCTTSSCBCGGGGHH
T ss_pred             ----------HHHhcCCCCCCcCHHHHHH
Confidence                      1123458899999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.91  E-value=7.2e-26  Score=182.74  Aligned_cols=206  Identities=15%  Similarity=0.099  Sum_probs=144.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+.+ +.+. ..++..+.+|++|+++++++++    
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998     4444432 2332 3468899999999998888775    


Q ss_pred             ---CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 ---QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                         ++|++|||||......    ...-++...+.                     |....+..+|..+..+.++..    
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~v---------------------nl~g~~~~~~~~~~~m~~~~~----  133 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAV---------------------NLDGVFFGTRLGIQRMKNKGL----  133 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHTTSSS----
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccc---------------------cccccchhHHHHHHHHHhcCC----
Confidence               6899999999864211    11112222221                     224456667877777665432    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCC--CCCCccccccCCCCCcchhcHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSE--FGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                      -++++|+++..             +..+..+...|..+|.+...++|.++.|  +++++||||+|+||...++.......
T Consensus       134 gg~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~  200 (251)
T d1zk4a1         134 GASIINMSSIE-------------GFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG  200 (251)
T ss_dssp             CEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT
T ss_pred             CCceEeeeccc-------------eeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC
Confidence            14666666655             4455566778888998888899999988  57899999999999887765433211


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .-+..         ......+++|+++|+|+|.
T Consensus       201 ~~~~~---------~~~~~~pl~R~~~pedvA~  224 (251)
T d1zk4a1         201 AEEAM---------SQRTKTPMGHIGEPNDIAY  224 (251)
T ss_dssp             HHHHH---------TSTTTCTTSSCBCHHHHHH
T ss_pred             HHHHH---------HHHhCCCCCCCcCHHHHHH
Confidence            11111         1223468899999999864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=3.2e-25  Score=181.21  Aligned_cols=212  Identities=14%  Similarity=0.117  Sum_probs=144.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-----cCCcEEEEccCCCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-----KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-----~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++.. +++.     ..++..+.+|++|+++++++++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN   76 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHH
Confidence            468999999999999999999999999999999998     4443322 2221     2357889999999999888775


Q ss_pred             -------CcCEEEEcCCCccch------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHH
Q 044721           76 -------QVDVVISTVGHTLLG------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus        76 -------~~d~vv~~a~~~~~~------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                             ++|++|||||.....      ...+.++...+.+                     ....+..+|.....+.++
T Consensus        77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vN---------------------l~~~~~~~~~~~~~m~~~  135 (274)
T d1xhla_          77 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN---------------------FQAVIEMTQKTKEHLIKT  135 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhc---------------------cccccccccccccccccc
Confidence                   689999999965311      1122223222222                     244566788888777665


Q ss_pred             cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          143 EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       143 ~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      .+     +++.+.++..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++...
T Consensus       136 ~~-----g~ii~~ss~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~  197 (274)
T d1xhla_         136 KG-----EIVNVSSIVA-------------GPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG  197 (274)
T ss_dssp             TC-----EEEEECCGGG-------------SSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHH
T ss_pred             cc-----ccccchhhhh-------------ccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhh
Confidence            54     5555444433             44556677889999999888999999999999999999999988765433


Q ss_pred             HHHH-HHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          223 KIRR-AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       223 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .... ........  ..........|++|+++|+|+|.
T Consensus       198 ~~~~~~~~~~~~~--~~~~~~~~~iPlgR~g~pediA~  233 (274)
T d1xhla_         198 AMGLPETASDKLY--SFIGSRKECIPVGHCGKPEEIAN  233 (274)
T ss_dssp             HTTCCHHHHHHHH--HHHHHCTTTCTTSSCBCHHHHHH
T ss_pred             hhcccchhhHHHH--HHHHHHHcCCCCCCCcCHHHHHH
Confidence            2210 00000000  00001123358899999999874

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=6.4e-27  Score=190.49  Aligned_cols=221  Identities=15%  Similarity=0.135  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh-----ccCCcEEEEccCCCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF-----KKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|+++||||+++||++++++|+++|++|++++|+     .++++. .+++     ...++..+.+|++|+++++++++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~   77 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILS   77 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999999999999999     444332 2222     12357889999999999888775


Q ss_pred             -------CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 -------QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 -------~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                             ++|++|||||.................. +++            ....|...++..+|..+..+.+..+    
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~-~~~------------~~~vNl~~~~~~~~~~~p~m~~~~g----  140 (264)
T d1spxa_          78 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES-YDA------------TLNLNLRSVIALTKKAVPHLSSTKG----  140 (264)
T ss_dssp             HHHHHHSCCCEEEECCC-------------CCHHH-HHH------------HHHHHTHHHHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHhCCCCEeecccccccCCccccccccCCHHH-HHH------------HHHHhHHHHHHHHhhhCCccccccC----
Confidence                   7999999999753221111111100000 111            1112224556668877766544432    


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                        +++++.+..            .+..+..+...|..+|.+...++|.++.||++++||||+|+||+..++........-
T Consensus       141 --~iI~~~S~~------------~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~  206 (264)
T d1spxa_         141 --EIVNISSIA------------SGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE  206 (264)
T ss_dssp             --EEEEECCTT------------SSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------
T ss_pred             --cceeeeeec------------cccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcH
Confidence              222222221            023456677889999999988999999999999999999999988776543221110


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      + ....+...........+++|+++|+|+|.
T Consensus       207 ~-~~~~~~~~~~~~~~~~Pl~R~g~pedvA~  236 (264)
T d1spxa_         207 E-TSKKFYSTMATMKECVPAGVMGQPQDIAE  236 (264)
T ss_dssp             -------HHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred             H-HHHHHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            0 00000000111223468899999998864

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-23  Score=163.71  Aligned_cols=143  Identities=23%  Similarity=0.280  Sum_probs=116.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |.||||+||||||+||++++++|+++|++|++++|++     ++.+   .....+++++.+|++|.+++.++++++|+||
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~-----~~~~---~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi   72 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-----SRLP---SEGPRPAHVVVGDVLQAADVDKTVAGQDAVI   72 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG-----GGSC---SSSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcCh-----hhcc---cccccccccccccccchhhHHHHhcCCCEEE
Confidence            6788999999999999999999999999999999994     3322   2224678999999999999999999999999


Q ss_pred             EcCCCcc--------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           82 STVGHTL--------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        82 ~~a~~~~--------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                      |++|...        ...++++++++.+++ ++++++ |+.+...+..........|+..|...|+++++.+++|++.|.
T Consensus        73 ~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp  151 (205)
T d1hdoa_          73 VLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMP  151 (205)
T ss_dssp             ECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             EEeccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEec
Confidence            9998753        345789999999999 999885 665554333222223456788999999999999999999885


Q ss_pred             c
Q 044721          153 L  153 (263)
Q Consensus       153 ~  153 (263)
                      .
T Consensus       152 ~  152 (205)
T d1hdoa_         152 P  152 (205)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-25  Score=185.11  Aligned_cols=208  Identities=18%  Similarity=0.175  Sum_probs=142.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh-------ccCCcEEEEccCCCHHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF-------KKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-------~~~~~~~~~~D~~~~~~~~~   72 (263)
                      |+++|+++||||+++||+++++.|+++|++|++++|+     .++.+. .+++       .+.++..+.+|++|++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~-----~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~   83 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   83 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence            4678999999999999999999999999999999998     433321 1111       13468889999999999888


Q ss_pred             Hhc-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHH
Q 044721           73 AIK-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVE  141 (263)
Q Consensus        73 ~~~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~  141 (263)
                      +++       ++|++|||||......    ...-.+...+.+                     ....+..+|..+..+.+
T Consensus        84 ~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vN---------------------l~g~~~~~~~~~~~m~~  142 (297)
T d1yxma1          84 LVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETN---------------------LTGTFYMCKAVYSSWMK  142 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhccc---------------------ccchhhHHHHHHHhhcc
Confidence            775       7999999999764211    112222222222                     24456678887777776


Q ss_pred             HcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcH
Q 044721          142 AEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTK  221 (263)
Q Consensus       142 ~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~  221 (263)
                      +.+     ++++|.++              ...........|..+|++...++|.++.||++++||||+|+||+..++..
T Consensus       143 ~~~-----g~Ii~~ss--------------~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  203 (297)
T d1yxma1         143 EHG-----GSIVNIIV--------------PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA  203 (297)
T ss_dssp             HHC-----EEEEEECC--------------CCTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGG
T ss_pred             ccc-----cccccccc--------------cccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcch
Confidence            654     44443211              12334456677888888888899999999999999999999998776543


Q ss_pred             HHHHHHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          222 AKIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ........+      ..........+++|+++|+|+|.
T Consensus       204 ~~~~~~~~~------~~~~~~~~~~plgR~g~pedvA~  235 (297)
T d1yxma1         204 VENYGSWGQ------SFFEGSFQKIPAKRIGVPEEVSS  235 (297)
T ss_dssp             GTTSGGGGG------GGGTTGGGGSTTSSCBCTHHHHH
T ss_pred             hhhccccCH------HHHHHHHhcCCCCCCcCHHHHHH
Confidence            211110000      01122334568999999999874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=5.6e-26  Score=185.62  Aligned_cols=212  Identities=15%  Similarity=0.126  Sum_probs=141.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-----cCCcEEEEccCCCHHHHHHHhc
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-----KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-----~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++.. +.+.     ..++..+++|++|+++++++++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   77 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN   77 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999999999999998     4444322 2221     2357889999999999888775


Q ss_pred             -------CcCEEEEcCCCccch--------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHH
Q 044721           76 -------QVDVVISTVGHTLLG--------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        76 -------~~d~vv~~a~~~~~~--------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                             ++|++|||||.....        .....++...+.                     |....+..+|.....+.
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~v---------------------Nl~~~~~~~~~~~p~m~  136 (272)
T d1xkqa_          78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL---------------------NLQAVIEMTKKVKPHLV  136 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHh---------------------hhhHHHHHHHhhccccc
Confidence                   799999999976411        111112222211                     22445666787777766


Q ss_pred             HHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          141 EAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      ++.+     +.+.+.++..             +..+..+...|.++|++...++|.++.||++++||||+|+||+..++.
T Consensus       137 ~~~g-----~iI~~~Ss~a-------------~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  198 (272)
T d1xkqa_         137 ASKG-----EIVNVSSIVA-------------GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  198 (272)
T ss_dssp             HHTC-----EEEEECCGGG-------------SSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             ccCC-----ccccccchhc-------------cccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence            5543     2222222222             445666778899999998889999999999999999999999887665


Q ss_pred             HHHHHHHHH-HcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          221 KAKIRRAVE-AEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       221 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .......-+ ...  ............+++|+++|+|+|.
T Consensus       199 ~~~~~~~~~~~~~--~~~~~~~~~~~~PlgR~g~pediA~  236 (272)
T d1xkqa_         199 TNAMGMPDQASQK--FYNFMASHKECIPIGAAGKPEHIAN  236 (272)
T ss_dssp             HHHTTCCHHHHHH--HHHHHHHCTTTCTTSSCBCHHHHHH
T ss_pred             hhccCCchHHHHH--HHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            432210000 000  0000011223458899999999864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=3.8e-25  Score=176.75  Aligned_cols=199  Identities=13%  Similarity=0.118  Sum_probs=141.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-HHHHHHhcCcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-ESLVKAIKQVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~v   80 (263)
                      +++|++|||||+++||+++++.|+++|++|++++|+     +++.+      ......+.+|+++. +.+.+.+.++|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~-----~~~l~------~~~~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELLK------RSGHRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHH------HTCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHH------hcCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence            478999999999999999999999999999999998     44332      23456788999863 5566777899999


Q ss_pred             EEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCch
Q 044721           81 ISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHG  156 (263)
Q Consensus        81 v~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~  156 (263)
                      |||||......    ...-++...+.                     |....+..+|..+..+.++..     |+++++.
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~~~~~~---------------------n~~~~~~~~~~~~~~m~~~~~-----G~ii~i~  124 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFKEAIDS---------------------LFLNMIKIVRNYLPAMKEKGW-----GRIVAIT  124 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----EEEEEEC
T ss_pred             EecccccCCcchhhhhhHHHHHHhhh---------------------hhhhhhhhhhccccccccccc-----ccccccc
Confidence            99999764211    11111111111                     113456667877777766553     7777665


Q ss_pred             hHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCCCee
Q 044721          157 SLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGIPYT  236 (263)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      +..             +..+......|..+|.+...++|.++.||++++||||+|+||+..++...........      
T Consensus       125 S~~-------------~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~------  185 (234)
T d1o5ia_         125 SFS-------------VISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK------  185 (234)
T ss_dssp             CGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH------
T ss_pred             ccc-------------ccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHH------
Confidence            554             4455666778888888888899999999999999999999998877664432211100      


Q ss_pred             EEecccccccccCCCCCCCCCCC
Q 044721          237 YVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                         .......+++|+++|+|+|.
T Consensus       186 ---~~~~~~~pl~R~~~pediA~  205 (234)
T d1o5ia_         186 ---KQVESQIPMRRMAKPEEIAS  205 (234)
T ss_dssp             ---HHHHTTSTTSSCBCHHHHHH
T ss_pred             ---HHHHhcCCCCCCcCHHHHHH
Confidence               01223468899999998864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-26  Score=185.58  Aligned_cols=209  Identities=16%  Similarity=0.135  Sum_probs=140.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhh----ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF----KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~----~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|+++||||+++||+++++.|+++|++|++++|+     .++.+. ...+    ...++..+.+|++|+++++++++  
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV   76 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999999999999999     433332 1222    23457889999999999888775  


Q ss_pred             -----CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -----QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                           ++|++|||||........+.+    +.+                     ....+..++..+..+.++..-  ..|
T Consensus        77 ~~~~G~iDilVnnAg~~~~~~~~~~~----~~n---------------------~~~~~~~~~~~~~~m~~~~~~--~~g  129 (254)
T d2gdza1          77 VDHFGRLDILVNNAGVNNEKNWEKTL----QIN---------------------LVSVISGTYLGLDYMSKQNGG--EGG  129 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCSSSHHHHH----HHH---------------------THHHHHHHHHHHHHHCGGGTC--CCE
T ss_pred             HHHcCCcCeecccccccccccchhee----eee---------------------hhhHHHHHHHHHHHHHHhhcC--CCc
Confidence                 799999999987643322211    111                     123445566666665543210  126


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceee--ccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRF--FPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      +++|++|..             +..+..+...|.++|.+...++|+  ++.||++++||||+|+||+..++....+...-
T Consensus       130 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~  196 (254)
T d2gdza1         130 IIINMSSLA-------------GLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEE  196 (254)
T ss_dssp             EEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHH
T ss_pred             EEEeeccHh-------------hccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccc
Confidence            666666655             455566677888888888778886  78899999999999999988766543322111


Q ss_pred             HHc-CCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAE-GIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ... ...+   ........+++|+++|+|+|.
T Consensus       197 ~~~~~~~~---~~~~~~~~p~~r~~~pedvA~  225 (254)
T d2gdza1         197 NMGQYIEY---KDHIKDMIKYYGILDPPLIAN  225 (254)
T ss_dssp             HHGGGGGG---HHHHHHHHHHHCCBCHHHHHH
T ss_pred             cccccHHH---HHHHHhcCCCCCCcCHHHHHH
Confidence            111 1000   011122346788888888763

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.90  E-value=1.5e-24  Score=176.73  Aligned_cols=175  Identities=17%  Similarity=0.162  Sum_probs=128.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc-cCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-KLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      +++|+++||||+++||++++++|+++|++|++++|+     +++.+ ..+++. ...+..+.+|++|+++++++++    
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998     44444 223332 2347788999999999988775    


Q ss_pred             ---CcCEEEEcCCCccch------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 ---QVDVVISTVGHTLLG------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                         ++|++|||||.....      ...+-++...+.+                     ....+..+|..+..+.++.+  
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vN---------------------l~g~~~~~~~~~~~m~~~~~--  135 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN---------------------VYGAFLVAKHAARVMIPAKK--  135 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHGGGTC--
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHh---------------------hcchhhhhhhhcchHhhcCC--
Confidence               799999999975311      1112222222222                     24567778888888776654  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcc-cchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHT-LLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                         |+++|+.+..             +.. .......|.++|.+...++|.++.||++++||||+|+||+..++.
T Consensus       136 ---g~ii~iss~~-------------~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  194 (268)
T d2bgka1         136 ---GSIVFTASIS-------------SFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL  194 (268)
T ss_dssp             ---EEEEEECCGG-------------GTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred             ---CCcccccccc-------------ccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence               6666655544             222 223345688888998889999999999999999999999866543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.90  E-value=1.7e-25  Score=180.73  Aligned_cols=208  Identities=14%  Similarity=0.113  Sum_probs=145.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++.+.+....+.+...+.+|++|+++++++++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999998     555443333235678889999999998887765      


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||......    ...-++...+.                     |....+..+|..+..+ ++.+     |
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~v---------------------Nl~~~~~~~~~~~~~m-~~~~-----G  131 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKI---------------------NTESVFIGCQQGIAAM-KETG-----G  131 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHH-TTTC-----E
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHH---------------------hhhHHHHHHHHHHHHH-HhcC-----C
Confidence             6899999999764211    11112222222                     2245566788777765 4443     8


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCC--ccccccCCCCCcchhcHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGND--VDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      +++|++|..             +..+..+...|..+|.+...++|.++.||+++  +||||+|+||...++......   
T Consensus       132 ~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~---  195 (253)
T d1hxha_         132 SIINMASVS-------------SWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL---  195 (253)
T ss_dssp             EEEEECCGG-------------GTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS---
T ss_pred             ceecccchh-------------hhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhC---
Confidence            888877776             55556677889999999888999999999874  599999999987765432211   


Q ss_pred             HHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       ..+.... .........+++|+++|+|+|.
T Consensus       196 -~~~~~~~-~~~~~~~~~~~gr~~~pedvA~  224 (253)
T d1hxha_         196 -PKGVSKE-MVLHDPKLNRAGRAYMPERIAQ  224 (253)
T ss_dssp             -CTTCCHH-HHBCBTTTBTTCCEECHHHHHH
T ss_pred             -cchhhHH-HHHhCccccccCCCCCHHHHHH
Confidence             1111100 0111122346788888888764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.89  E-value=1.1e-24  Score=176.26  Aligned_cols=210  Identities=17%  Similarity=0.202  Sum_probs=139.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++ ..+.+.  ...+..+.+|++++++++++++   
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999     43333 222222  3457788999999998877764   


Q ss_pred             -----CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           .+|+++||||.......    .+-.+.+.+.                     +...++..+|.....+.++.+  
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~---------------------nl~~~~~~~~~~~~~m~~~~~--  135 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGT---------------------NFEAAYHLSQIAYPLLKASQN--  135 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTS--
T ss_pred             HHhCCCcEEEeccccccccCccccCCHHHHhhhhhh---------------------ccccccccccccccccccccc--
Confidence                 48999999998752111    1111111111                     113456667777776666654  


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRR  226 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~  226 (263)
                         |+++++++..             +..+......|..+|.+...++|.++.||++++||||+|+||+..++.......
T Consensus       136 ---g~ii~isS~~-------------~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~  199 (258)
T d1ae1a_         136 ---GNVIFLSSIA-------------GFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIK  199 (258)
T ss_dssp             ---EEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------
T ss_pred             ---cccccccccc-------------cccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhh
Confidence               6766666555             445556677888888888889999999999999999999999987765332211


Q ss_pred             HHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          227 AVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ....   . ...........+++|+++|+|+|.
T Consensus       200 ~~~~---~-~~~~~~~~~~~plgR~~~pediA~  228 (258)
T d1ae1a_         200 KNPH---Q-KEEIDNFIVKTPMGRAGKPQEVSA  228 (258)
T ss_dssp             -------C-HHHHHHHHHHSTTCSCBCHHHHHH
T ss_pred             hhhh---h-HHHHHHHHhcCCCCCCcCHHHHHH
Confidence            1000   0 000111223357899999988763

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.1e-24  Score=173.40  Aligned_cols=208  Identities=14%  Similarity=0.114  Sum_probs=141.2

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh---cCcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI---KQVD   78 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d   78 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     +++++.+.+  ..++....+|+.+.+.++..+   .++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~-----~~~l~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~id   76 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEK--YPGIQTRVLDVTKKKQIDQFANEVERLD   76 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGGGG--STTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHh--ccCCceeeeeccccccccccccccccce
Confidence            468999999999999999999999999999999998     555543332  356788889998877766654   4899


Q ss_pred             EEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           79 VVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        79 ~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ++|||+|.......    .+-++...+.                     +....+..++.....+.++.+     |++++
T Consensus        77 ~lVn~ag~~~~~~~~~~~~~~~~~~~~v---------------------n~~~~~~~~~~~~~~~~~~~~-----g~Ii~  130 (245)
T d2ag5a1          77 VLFNVAGFVHHGTVLDCEEKDWDFSMNL---------------------NVRSMYLMIKAFLPKMLAQKS-----GNIIN  130 (245)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----EEEEE
T ss_pred             eEEecccccCCCChhhCCHHHHHHHHHH---------------------hhccchhHHHhhCcccccCCC-----ceeee
Confidence            99999998753211    1111111111                     113456667777766666553     56555


Q ss_pred             chhHHHHhcccceEEEecCc-ccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHHcCC
Q 044721          155 HGSLVKAIKQVDVVISTVGH-TLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEAEGI  233 (263)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~~~~  233 (263)
                      +++..             +. .+......|..+|++...++|.++.||++++||||+|+||+..++........    ..
T Consensus       131 isS~~-------------~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~----~~  193 (245)
T d2ag5a1         131 MSSVA-------------SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA----RG  193 (245)
T ss_dssp             ECCSB-------------TTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH----SS
T ss_pred             eechh-------------hccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhh----hh
Confidence            54433             22 34566677888888877799999999999999999999998877554432221    11


Q ss_pred             CeeEEecccccccccCCCCCCCCCCC
Q 044721          234 PYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .............+++|+++|+|+|.
T Consensus       194 ~~~~~~~~~~~~~pl~R~~~pedva~  219 (245)
T d2ag5a1         194 NPEEARNDFLKRQKTGRFATAEEIAM  219 (245)
T ss_dssp             SHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             hhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            00001112233567889999888764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.88  E-value=8.6e-25  Score=175.31  Aligned_cols=201  Identities=15%  Similarity=0.079  Sum_probs=133.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+     .++.+......+.++..+++|++++++++++++      
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999999     444443222225678889999999999988775      


Q ss_pred             -CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       ++|++|||||.......    .+-++.+.+.+                     ....+..+|.....+ ++.+      
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~k~~~~~~-~~~~------  129 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVN---------------------LTGSFLVARKAGEVL-EEGG------  129 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHH---------------------HHHHHHHHHHHHHHC-CTTC------
T ss_pred             CCccEeccccccccccchhhhhccccccccccc---------------------ccccccccccccccc-cccc------
Confidence             69999999987642221    11111111111                     123445566544322 2211      


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHHHH
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAVEA  230 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~~~  230 (263)
                      .+              .+.+..+.....+...|..+|.+...++|.++.||++++||||||+||...++....+..... 
T Consensus       130 ~i--------------~~~ss~a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~-  194 (241)
T d2a4ka1         130 SL--------------VLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAW-  194 (241)
T ss_dssp             EE--------------EEECCCTTCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHH-
T ss_pred             ce--------------eeccccccccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHH-
Confidence            00              111222334445677788888888889999999999999999999999876654321111000 


Q ss_pred             cCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          231 EGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                               .......+++|+++|+|+|.
T Consensus       195 ---------~~~~~~~p~~r~~~p~dva~  214 (241)
T d2a4ka1         195 ---------EQEVGASPLGRAGRPEEVAQ  214 (241)
T ss_dssp             ---------HHHHHTSTTCSCBCHHHHHH
T ss_pred             ---------HHHHhCCCCCCCcCHHHHHH
Confidence                     01222357788888888764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.88  E-value=6.8e-25  Score=177.94  Aligned_cols=214  Identities=14%  Similarity=0.145  Sum_probs=135.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +.+|++|||||+++||+++++.|+++|++|++.+|+.    .+..+. .+.+.  +.++..+.+|++|+++++++++   
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~----~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   79 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCC----hHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999887763    222221 12221  4568889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||......    ...-.+......                     ....+..+|...+.+. +.    
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~m~-~~----  133 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLN---------------------TRGQFFVAQQGLKHCR-RG----  133 (259)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHEE-EE----
T ss_pred             HHcCCCcEEEeccccccccccccchHHHHHHHHhhc---------------------cceeeeehhhhhhhhh-cC----
Confidence                6999999999875221    111112111111                     1334555666665542 21    


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                        +++.++.+...            ...+..+...|..+|.+...++|.++.+|++++||||+|+||+..++........
T Consensus       134 --g~~iii~s~~~------------~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~  199 (259)
T d1ja9a_         134 --GRIILTSSIAA------------VMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWH  199 (259)
T ss_dssp             --EEEEEECCGGG------------TCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGG
T ss_pred             --Ccccccccccc------------cccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhh
Confidence              22222212110            1234456677778887877799999999999999999999998876654432111


Q ss_pred             HHHc---CCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 VEAE---GIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ....   ......+........+++|+++|+|+|.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~  234 (259)
T d1ja9a_         200 YAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR  234 (259)
T ss_dssp             TSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred             hhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHH
Confidence            1100   1111111112234468899999988763

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=2.9e-24  Score=174.00  Aligned_cols=204  Identities=14%  Similarity=0.078  Sum_probs=130.4

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      +++|+++||||+|  +||++++++|+++|++|++.+|+.     ...+..+..  ...+...+++|++|+++++++++  
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcH-----HHHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            3689999999987  899999999999999999988873     222211111  13467889999999999888765  


Q ss_pred             -----CcCEEEEcCCCccchhH--------HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHH
Q 044721           76 -----QVDVVISTVGHTLLGDQ--------VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEA  142 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~~--------~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~  142 (263)
                           ++|++|||||.......        ..-.+...+.                     +....+..+|..... +++
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~v---------------------n~~~~~~~~~~~~~~-~~~  138 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV---------------------SAYSLVAVARRAEPL-LRE  138 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHTTT-EEE
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhh---------------------hHHHHHHHHHHHHHH-hcc
Confidence                 69999999997541110        0001111111                     112233334443322 111


Q ss_pred             cCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          143 EGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       143 ~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                            -|+++|+++..             +..+..+...|..+|++...++|.++.||++++||||+|+||+..++...
T Consensus       139 ------~G~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~  199 (256)
T d1ulua_         139 ------GGGIVTLTYYA-------------SEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR  199 (256)
T ss_dssp             ------EEEEEEEECGG-------------GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             ------CCEEEEEeehH-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecccc
Confidence                  36666665554             45566677889999999888999999999999999999999987654332


Q ss_pred             HHHHHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          223 KIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      .....-+        .........+++|+++|+|+|.
T Consensus       200 ~~~~~~~--------~~~~~~~~~pl~R~~~pedvA~  228 (256)
T d1ulua_         200 SIPGFTK--------MYDRVAQTAPLRRNITQEEVGN  228 (256)
T ss_dssp             ----CHH--------HHHHHHHHSTTSSCCCHHHHHH
T ss_pred             chhhhHH--------HHHHHHhcCCCCCCcCHHHHHH
Confidence            2110000        0011223457899999998864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.87  E-value=2.3e-24  Score=178.10  Aligned_cols=207  Identities=13%  Similarity=0.109  Sum_probs=126.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhh---ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      ++|+++||||+|+||+++++.|+++|++|++++|+     .++.+ ..+++   .+.++..+.+|++++++++++++   
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~-----~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   98 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK-----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   98 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence            46999999999999999999999999999999999     43322 12222   24568889999999999877664   


Q ss_pred             ----CcCEEEEcCCCccchhH----HHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGDQ----VKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~~----~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||.......    ..-........                     ....+...+..+..+.....   
T Consensus        99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~~~~~~~---  154 (294)
T d1w6ua_          99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV---------------------LNGTAFVTLEIGKQLIKAQK---  154 (294)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHTTC---
T ss_pred             hhccccchhhhhhhhccccccccchhhhhhhheeee---------------------cccchhhhhhhhcccccccc---
Confidence                79999999997652110    00000000000                     01122223333333332222   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                       .+.+.+..+..             +.....+...|..+|.+...++|.++.+|++.+||||+|+||+..++......  
T Consensus       155 -~~~i~~~ss~~-------------~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~--  218 (294)
T d1w6ua_         155 -GAAFLSITTIY-------------AETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL--  218 (294)
T ss_dssp             -CEEEEEECCTH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C--
T ss_pred             -cccccccccch-------------hhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc--
Confidence             12222221211             12233455667777777777899999999999999999999987765432211  


Q ss_pred             HHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          228 VEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                       ...    ...........+++|+++|+|+|.
T Consensus       219 -~~~----~~~~~~~~~~~pl~R~~~pediA~  245 (294)
T d1w6ua_         219 -DPT----GTFEKEMIGRIPCGRLGTVEELAN  245 (294)
T ss_dssp             -CTT----SHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred             -CCc----HHHHHHHhhcCCCCCCCCHHHHHH
Confidence             000    001122334468899999988864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.87  E-value=5.6e-24  Score=173.75  Aligned_cols=214  Identities=15%  Similarity=0.132  Sum_probs=128.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+..    +..+ ..+.+.  ..++..+++|++|+++++++++   
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~----~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST----ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCch----HHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998742    2222 122221  4568889999999999888775   


Q ss_pred             ----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||+|......    ...-.+...+.+                     ....+..+|..+..+.++     
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~n---------------------l~~~~~~~~~~~~~m~~~-----  145 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN---------------------TRGQFFVAREAYKHLEIG-----  145 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHSCTT-----
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhc---------------------cceeeeeccccccccccc-----
Confidence                6899999999775211    011111111111                     022333444444443222     


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHH
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRA  227 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~  227 (263)
                        |++.++.+...            ..........|..+|++...++|.++.+|++++||||+|+||+..++....+...
T Consensus       146 --g~~i~i~s~~~------------~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~  211 (272)
T d1g0oa_         146 --GRLILMGSITG------------QAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCRE  211 (272)
T ss_dssp             --CEEEEECCGGG------------TCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGG
T ss_pred             --ccccccccccc------------ccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHh
Confidence              11111111110            1112334445555666655588889999999999999999999877654332211


Q ss_pred             HHHc--CCCeeEE-ecccccccccCCCCCCCCCCC
Q 044721          228 VEAE--GIPYTYV-ASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       228 ~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ....  ....... ........+++|+++|+|+|.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~  246 (272)
T d1g0oa_         212 YIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR  246 (272)
T ss_dssp             GSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHH
T ss_pred             hhhcccccchHHHHHHHHHccCCCCCCcCHHHHHH
Confidence            1100  1110000 001223467899999998874

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.87  E-value=9e-23  Score=163.27  Aligned_cols=172  Identities=11%  Similarity=0.081  Sum_probs=129.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCC-------EEEEEcCCCCCCcchhhh-hhhhc--cCCcEEEEccCCCHHHHHHHh
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHP-------TFVLVRESTLSAPSKSQL-LDHFK--KLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      +++|||||+++||+++++.|+++|++       |++.+|+     .++++. .+++.  +.++..+.+|++|++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~   76 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRLT   76 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999998       8888888     444432 22232  345778999999999888877


Q ss_pred             c-------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           75 K-------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        75 ~-------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                      +       ++|++|||||......    ...-++...+.                     |...++..+|..+..+.++.
T Consensus        77 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~v---------------------Nl~g~~~~~~~~~~~m~~~~  135 (240)
T d2bd0a1          77 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNT---------------------NLKGTFFLTQALFALMERQH  135 (240)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCE---------------------eehHHHHHHHHHhHHHHhcC
Confidence            5       6999999999765221    11222222222                     22456777888888777766


Q ss_pred             CCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          144 GIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       144 ~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +     |+++|++|..             +..+..+...|.++|.+...++|.++.|+++++||||+|+||+..++.
T Consensus       136 ~-----G~Ii~isS~~-------------~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~  194 (240)
T d2bd0a1         136 S-----GHIFFITSVA-------------ATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM  194 (240)
T ss_dssp             C-----EEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred             C-----CceEEEechh-------------hcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence            4     8888777766             555666778899999998889999999999999999999999876543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.8e-24  Score=171.26  Aligned_cols=205  Identities=17%  Similarity=0.125  Sum_probs=136.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhh-hhhhc----cCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK----KLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ++|++|||||+++||+++++.|+++|++|++++|+     +++.+. .+++.    ..++..+.+|++|+++++++++  
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            57999999999999999999999999999999998     444432 22222    2357788999999998888765  


Q ss_pred             -----CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           76 -----QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                           ++|++|||||......    ..+-++...+.+                     ....+..++..+..+.+...- 
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~n---------------------l~~~~~~~~~~~~~~~~~~~~-  141 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVN---------------------VLALSICTREAYQSMKERNVD-  141 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhh---------------------hhHHHHHHHHHHHHHHHhccC-
Confidence                 7999999999865221    122222222222                     134455577666666554310 


Q ss_pred             EEEEeccCchhHHHHhcccceEEEecCc--ccchhHHHHHHHHHhcCCceeeccCCC--CCCccccccCCCCCcchhcHH
Q 044721          147 YTYGDVLNHGSLVKAIKQVDVVISTVGH--TLLADQVKIIAAIKEAGNVKRFFPSEF--GNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       147 ~~~gr~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vn~v~pg~~~~~~~~  222 (263)
                        -|+++++++..             +.  .+..+...|..+|.+...++|.++.||  +..+|+||+|+||...++...
T Consensus       142 --~g~Ii~isS~~-------------~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~  206 (257)
T d1xg5a_         142 --DGHIININSMS-------------GHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  206 (257)
T ss_dssp             --SCEEEEECCGG-------------GTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             --CCceEEEechH-------------hcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh
Confidence              14455444443             22  234567789999999989999999998  889999999999987765543


Q ss_pred             HHHHHHHHcCCCeeEEecccccccccCCCCCCCCCCC
Q 044721          223 KIRRAVEAEGIPYTYVASNFFAGYFLPNLSQPGATAP  259 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  259 (263)
                      ....    ..      .......++++|+++|+|+|.
T Consensus       207 ~~~~----~~------~~~~~~~~~~~r~~~pedvA~  233 (257)
T d1xg5a_         207 KLHD----KD------PEKAAATYEQMKCLKPEDVAE  233 (257)
T ss_dssp             HHTT----TC------HHHHHHHHC---CBCHHHHHH
T ss_pred             hcCh----hh------HHHHHhcCCCCCCcCHHHHHH
Confidence            3211    00      011233456788888887763

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.86  E-value=9e-24  Score=170.50  Aligned_cols=167  Identities=15%  Similarity=0.058  Sum_probs=120.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-------CcC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-------QVD   78 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   78 (263)
                      +++||||+++||+++++.|+++|++|++.+|+.     ++.+.++...   .....+|++|.++++++++       ++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~-----~~~~~~~~~~---~~~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESF-----KQKDELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG-----GSHHHHHHHH---HHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHhhh---CcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999983     3333222221   1233577777666655543       799


Q ss_pred             EEEEcCCCcc-chh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           79 VVISTVGHTL-LGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        79 ~vv~~a~~~~-~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                      ++|||||... ...    ...-++...+.                     |....+..+|..+..+.++.+     |+++
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~v---------------------nl~~~~~~~~~~~~~m~~~~~-----G~IV  127 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEA---------------------LQIRPFALVNAVASQMKKRKS-----GHII  127 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHH---------------------HTHHHHHHHHHHHHHHHHHTC-----CEEE
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHH---------------------HhHHHHHHHHHHHHhhccccc-----ceee
Confidence            9999998643 111    11112222211                     124567778888888777654     7777


Q ss_pred             CchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          154 NHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       154 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      |+++..             +..+..+...|..+|.+...++|.++.||++++||||+|+||+..++
T Consensus       128 ~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~  180 (252)
T d1zmta1         128 FITSAT-------------PFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSE  180 (252)
T ss_dssp             EECCST-------------TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCB
T ss_pred             cccccc-------------cccccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCc
Confidence            776665             55566677889999999988999999999999999999999986654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=2.1e-23  Score=172.32  Aligned_cols=177  Identities=16%  Similarity=0.088  Sum_probs=129.8

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCC----cchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc-
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA----PSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.....    .+..+ ..+++ ......+.+|+.|.++++++++ 
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI-RRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHH-HHTTCEEEEECCCGGGHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHH-hhcccccccccchHHHHHHHHHH
Confidence            46899999999999999999999999999999998754211    12222 22222 2345567789988777666554 


Q ss_pred             ------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            ++|++|||||......    ...-++.+.+.                     |....+..+|..+..+.++.+ 
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~v---------------------Nl~g~~~~~~~~~p~m~~~~~-  141 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRV---------------------HLRGSFQVTRAAWDHMKKQNY-  141 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhce---------------------eehhhHHHHHHhHHHHHhCCC-
Confidence                  7999999999875221    11112222222                     224567778988888877764 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcch
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAF  218 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~  218 (263)
                          |+++|++|..             +..+..+...|.++|++...+++.++.|+++++||||+|+||....
T Consensus       142 ----G~IV~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t  197 (302)
T d1gz6a_         142 ----GRIIMTASAS-------------GIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR  197 (302)
T ss_dssp             ----EEEEEECCHH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST
T ss_pred             ----cEEEEeCChh-------------hcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCc
Confidence                8999988877             4445567789999999999999999999999999999999996543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.4e-22  Score=160.09  Aligned_cols=173  Identities=14%  Similarity=0.124  Sum_probs=131.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhh--ccCCcEEEEccCCCHHHHHHHhc---
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF--KKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      .++|+++||||+++||+++++.|+++|++|++++|+     +++++.+ +++  .+.++..+.+|++|+++++++++   
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999     5444322 222  24578899999999999888775   


Q ss_pred             ----CcCEEEEcCCCccc----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCE
Q 044721           76 ----QVDVVISTVGHTLL----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPY  147 (263)
Q Consensus        76 ----~~d~vv~~a~~~~~----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~  147 (263)
                          ++|++|||||....    +......+.+.+.+                     ....+..++..+..+.++..   
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN---------------------~~g~~~l~~~~lp~m~~~~~---  135 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVN---------------------VLAHFWTTKAFLPAMTKNNH---  135 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHTTC---
T ss_pred             HHcCCCceeEeeccccccccccccchhHHHhhccee---------------------eeccHHHHHHHhhhHHhcCC---
Confidence                69999999998752    22222233332222                     24556778888887766653   


Q ss_pred             EEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCC---CccccccCCCCCcch
Q 044721          148 TYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGN---DVDRVNAVEPAKSAF  218 (263)
Q Consensus       148 ~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~vn~v~pg~~~~  218 (263)
                        |+++|++|..             +..+..+...|.++|.+...+++.++.|+++   ++|+||+|+||+..+
T Consensus       136 --G~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T  194 (244)
T d1yb1a_         136 --GHIVTVASAA-------------GHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT  194 (244)
T ss_dssp             --EEEEEECCCC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred             --ceEEEeecch-------------hcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCC
Confidence              7887776666             6667788899999999998999999999865   689999999996544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=5.2e-21  Score=161.88  Aligned_cols=151  Identities=19%  Similarity=0.250  Sum_probs=112.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhh---hhccCCcEEEEccCCCHHHHHHHhc--CcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD---HFKKLGVNLVIGDVLNHESLVKAIK--QVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~   79 (263)
                      |++||||||||||++++++|+++|++|++++|..+.....+.+.+.   .....++.++++|++|.++++++++  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            7899999999999999999999999999999965332122222111   1124578999999999999999998  4599


Q ss_pred             EEEcCCCcc---------------chhHHHHHHHHHHhCCcc---eeee-cc---ccCC----CCccccCCCCchHHHHH
Q 044721           80 VISTVGHTL---------------LGDQVKIIAAIKEAGNIK---RFFP-SE---FGND----VDRVHAVEPAKSAFATK  133 (263)
Q Consensus        80 vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~---~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k  133 (263)
                      |+|+|+..+               +.++.++++++.+.+ ++   ++|+ ||   ||..    .+|+.+.+|.++|+.+|
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK  160 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHH
Confidence            999998754               345789999999887 54   5764 43   5543    35667778899999999


Q ss_pred             HHHHHHHH----HcCCCEEEEeccCch
Q 044721          134 AKIRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       134 ~~~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      .++|++++    +.++++++.|+.|+.
T Consensus       161 ~~~E~~~~~~~~~~~l~~~ilR~~~vy  187 (357)
T d1db3a_         161 LYAYWITVNYRESYGMYACNGILFNHE  187 (357)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecccc
Confidence            99999885    458999999987653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.8e-20  Score=157.39  Aligned_cols=149  Identities=19%  Similarity=0.346  Sum_probs=115.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |||||||||||||++|++.|+++|++|++++|-.... .......+.....++.++++|++|.+.+.++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            6799999999999999999999999999998754322 222222333445689999999999999999998  8999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC-----CccccCCCCchHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV-----DRVHAVEPAKSAFATKAKIRR  138 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~-----~~~~~~~~~~~~~~~k~~~e~  138 (263)
                      +|+...               +.+++++++++.+.+ ++++|+ |+   |+...     ++....+|...|+.+|...|+
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~  158 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence            998754               345689999999999 999885 43   33221     223344678899999999999


Q ss_pred             HHHH-----cCCCEEEEeccCc
Q 044721          139 AVEA-----EGIPYTYGDVLNH  155 (263)
Q Consensus       139 ~~~~-----~~~~~~~gr~~n~  155 (263)
                      ++.+     .++++++.|..+.
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v  180 (338)
T d1udca_         159 ILTDLQKAQPDWSIALLRYFNP  180 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEECEE
T ss_pred             HHHHHHhhccCCeEEEEeeccE
Confidence            8853     4788888876653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.84  E-value=6.5e-22  Score=159.53  Aligned_cols=176  Identities=16%  Similarity=0.101  Sum_probs=128.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh-hccCCcEEEEccCC-CHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKKLGVNLVIGDVL-NHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~-~~~~~~~~~~----   75 (263)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+.  .+..+.+.. ....++..+.+|++ +.++++++++    
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN--PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC--HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc--HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999988543  112221122 22346788999998 5666766554    


Q ss_pred             ---CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEec
Q 044721           76 ---QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDV  152 (263)
Q Consensus        76 ---~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~  152 (263)
                         ++|+||||||....+..    +.+.+.+                     ....+..++..++.+.++..-+  .|++
T Consensus        81 ~~g~iDilvnnAG~~~~~~~----~~~~~vN---------------------l~g~~~~~~~~~~~m~~~~~~~--~g~I  133 (254)
T d1sbya1          81 QLKTVDILINGAGILDDHQI----ERTIAIN---------------------FTGLVNTTTAILDFWDKRKGGP--GGII  133 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCH----HHHHHHH---------------------THHHHHHHHHHHHHHCGGGTCC--CEEE
T ss_pred             HcCCCCEEEeCCCCCCHHHH----HHHHHHH---------------------hHHHHHHHHHHHHHhhhcccCC--CceE
Confidence               79999999997653332    2222222                     1445667888887776653211  3666


Q ss_pred             cCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          153 LNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       153 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      +|+++..             +..+..+...|.++|++...+++.++.+|++++||||+|+||+..++
T Consensus       134 i~isS~~-------------~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~  187 (254)
T d1sbya1         134 ANICSVT-------------GFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             EEECCGG-------------GTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             EEEechh-------------hccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence            6666655             55566777889999999988999999999999999999999987654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=6.8e-20  Score=155.12  Aligned_cols=147  Identities=20%  Similarity=0.188  Sum_probs=115.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |.++|+|||||||||||++|++.|+++|++|++++|........        ......+..+|+.+.+.+.++++++|.|
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~V   83 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--------DMFCDEFHLVDLRVMENCLKVTEGVDHV   83 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--------GGTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh--------hcccCcEEEeechhHHHHHHHhhcCCeE
Confidence            56789999999999999999999999999999998764321111        1234678889999999999999999999


Q ss_pred             EEcCCCcc----------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC-----------CccccCCCCchH
Q 044721           81 ISTVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV-----------DRVHAVEPAKSA  129 (263)
Q Consensus        81 v~~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~-----------~~~~~~~~~~~~  129 (263)
                      ||+|+...                +..+.++++++.+.+ ++++|+ ||   ++...           .+..+..|.+.|
T Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y  162 (363)
T d2c5aa1          84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF  162 (363)
T ss_dssp             EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred             eecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHH
Confidence            99997665                234688999999999 999885 54   22211           123455678899


Q ss_pred             HHHHHHHHHHHH----HcCCCEEEEeccCch
Q 044721          130 FATKAKIRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       130 ~~~k~~~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      +.+|.++|++++    ..++++++.|+.+..
T Consensus       163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vy  193 (363)
T d2c5aa1         163 GLEKLATEELCKHYNKDFGIECRIGRFHNIY  193 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEe
Confidence            999999999885    458999999977754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.8e-22  Score=160.01  Aligned_cols=208  Identities=14%  Similarity=0.105  Sum_probs=139.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhc-----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      .++|+++||||+++||++++++|+++|++|++++|+.     ++.+ ..+++ ..+......|+.+.+.+++.+.     
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN-----SGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-----SSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHh-CCCcccccccccccccccccccccccc
Confidence            5789999999999999999999999999999999984     3333 22333 5677888999999877665543     


Q ss_pred             --CcCEEEEcCCCccchh----------HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc
Q 044721           76 --QVDVVISTVGHTLLGD----------QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE  143 (263)
Q Consensus        76 --~~d~vv~~a~~~~~~~----------~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~  143 (263)
                        ..|.++++++......          ...-.+.+.+                     .+....+..+|.....+....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------vnl~~~~~~~~~~~~~~~~~~  135 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD---------------------VNLMGTFNVIRLVAGEMGQNE  135 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHH---------------------HHTHHHHHHHHHHHHHHTTSC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHh---------------------HHHHHHHHHHHHhHHHHHHhh
Confidence              6799998877553110          0111111111                     122445677787777665431


Q ss_pred             C-CCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHH
Q 044721          144 G-IPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKA  222 (263)
Q Consensus       144 ~-~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~  222 (263)
                      . .....|+++|+++..             +..+..+...|..+|++...++|.++.||++++||||+|+||+..++...
T Consensus       136 ~~~~~~~G~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~  202 (248)
T d2o23a1         136 PDQGGQRGVIINTASVA-------------AFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT  202 (248)
T ss_dssp             CCTTSCCEEEEEECCTH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred             hhccCCceEEEEecchh-------------hccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh
Confidence            1 111247777777766             44455677889999999999999999999999999999999987766543


Q ss_pred             HHHHHHHHcCCCeeEEeccccccccc-CCCCCCCCCCC
Q 044721          223 KIRRAVEAEGIPYTYVASNFFAGYFL-PNLSQPGATAP  259 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~  259 (263)
                      .+...          .........++ +|+++|+|+|.
T Consensus       203 ~~~~~----------~~~~~~~~~pl~~R~g~peevA~  230 (248)
T d2o23a1         203 SLPEK----------VCNFLASQVPFPSRLGDPAEYAH  230 (248)
T ss_dssp             -----------------CHHHHTCSSSCSCBCHHHHHH
T ss_pred             cCCHH----------HHHHHHhcCCCCCCCcCHHHHHH
Confidence            32110          11112233444 89999998864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=5.1e-20  Score=155.05  Aligned_cols=148  Identities=20%  Similarity=0.298  Sum_probs=114.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+|||||||||||++|++.|+++|++|+++++..... .........+...+++++++|++|.++++++++  ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcc-hhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            6799999999999999999999999999998654322 122222233445679999999999999999887  8999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC--------CCccccCCCCchHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND--------VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~--------~~~~~~~~~~~~~~~~k~~  135 (263)
                      +|+...               +..+.++++++.+.+ ++++++ |+   ||..        .+++.+.+|.+.|+.+|..
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~  159 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  159 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence            999764               344689999999999 999884 43   4422        2345666788899999999


Q ss_pred             HHHHHHH------cCCCEEEEeccC
Q 044721          136 IRRAVEA------EGIPYTYGDVLN  154 (263)
Q Consensus       136 ~e~~~~~------~~~~~~~gr~~n  154 (263)
                      .|++++.      .++++++.|..+
T Consensus       160 ~E~~~~~~~~~~~~~~~~~~lR~~~  184 (347)
T d1z45a2         160 IENILNDLYNSDKKSWKFAILRYFN  184 (347)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEECE
T ss_pred             HHHHHHHHHHhhccCCcEEEEeecc
Confidence            9998853      367888887554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.82  E-value=3.4e-20  Score=149.04  Aligned_cols=81  Identities=17%  Similarity=0.270  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH---HCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASV---KAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~---~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      .||+||||||+++||+++++.|+   ++|++|++++|+.+.     .+.++++  ...++.++.+|++|+++++++++  
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i   75 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ-----AKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI   75 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS-----CHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHH-----HHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhh
Confidence            36899999999999999999997   468999999999543     2222222  24678999999999988876654  


Q ss_pred             -------CcCEEEEcCCCcc
Q 044721           76 -------QVDVVISTVGHTL   88 (263)
Q Consensus        76 -------~~d~vv~~a~~~~   88 (263)
                             ++|++|||||...
T Consensus        76 ~~~~~~~~iDiLvnNAg~~~   95 (248)
T d1snya_          76 EGVTKDQGLNVLFNNAGIAP   95 (248)
T ss_dssp             HHHHGGGCCSEEEECCCCCC
T ss_pred             HHHhhcCCcceEEeeccccc
Confidence                   5899999999753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-19  Score=144.46  Aligned_cols=138  Identities=18%  Similarity=0.186  Sum_probs=111.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |++|+||||||||+||++++++|+++|.  +|++++|++......+        ...+....+|+.+.+++.++++++|+
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~--------~~~i~~~~~D~~~~~~~~~~~~~~d~   83 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDV   83 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc--------cceeeeeeeccccccccccccccccc
Confidence            4568999999999999999999999994  7999999864432111        23567788999999999999999999


Q ss_pred             EEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCC
Q 044721           80 VISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIP  146 (263)
Q Consensus        80 vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~  146 (263)
                      +||++|...            +..+.++++.+.+.+ ++++++ |+.+....      +.+.|..+|..+|+.+++.+++
T Consensus        84 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~------~~~~Y~~~K~~~E~~l~~~~~~  156 (232)
T d2bkaa1          84 GFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS------SNFLYLQVKGEVEAKVEELKFD  156 (232)
T ss_dssp             EEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHHTTCCS
T ss_pred             ccccccccccccchhhhhhhcccccceeeecccccC-ccccccCCccccccC------ccchhHHHHHHhhhcccccccc
Confidence            999998764            334578999999999 999885 66655332      2567999999999999999986


Q ss_pred             -EEEEeccC
Q 044721          147 -YTYGDVLN  154 (263)
Q Consensus       147 -~~~gr~~n  154 (263)
                       +++.|...
T Consensus       157 ~~~IlRP~~  165 (232)
T d2bkaa1         157 RYSVFRPGV  165 (232)
T ss_dssp             EEEEEECCE
T ss_pred             ceEEecCce
Confidence             78888554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.82  E-value=3.9e-19  Score=149.54  Aligned_cols=151  Identities=20%  Similarity=0.243  Sum_probs=115.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ||+|||||||||||++|++.|++.|++|.++.++.... ......+..+...++.++.+|+.|.+.+.+++.+.|.++|+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~-~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-AGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT-TCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc-cccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            68999999999999999999999999877776653211 11222223444568999999999999999999999999999


Q ss_pred             CCCcc---------------chhHHHHHHHHHHhCCcceeeec---cccCC----------------CCccccCCCCchH
Q 044721           84 VGHTL---------------LGDQVKIIAAIKEAGNIKRFFPS---EFGND----------------VDRVHAVEPAKSA  129 (263)
Q Consensus        84 a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S---~~g~~----------------~~~~~~~~~~~~~  129 (263)
                      |+...               +.++.++++++...+ .+.++.|   .||..                ..+..+..|.+.|
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            98764               345689999999998 7766643   34421                1234556678899


Q ss_pred             HHHHHHHHHHHH----HcCCCEEEEeccCch
Q 044721          130 FATKAKIRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       130 ~~~k~~~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      +.+|.++|.+++    +.++++++.|+.+..
T Consensus       160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vy  190 (346)
T d1oc2a_         160 SSTKAASDLIVKAWVRSFGVKATISNCSNNY  190 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeeccee
Confidence            999999998884    468999999987754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=3.7e-21  Score=154.96  Aligned_cols=187  Identities=16%  Similarity=0.125  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc----
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      |++|+||||||+++||++++++|+++|+  .|++.+|+     .++.+.+.+....++.++.+|++|.++++++++    
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~-----~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD-----VEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS-----GGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCC-----HHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  58888888     445544444445678999999999998877664    


Q ss_pred             -----CcCEEEEcCCCccc-h----hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 -----QVDVVISTVGHTLL-G----DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 -----~~d~vv~~a~~~~~-~----~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                           ++|++|||||.... .    ....-++...+.                     |....+..++..+..+.+...-
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~v---------------------N~~g~~~l~~~~~p~l~~~~~~  134 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV---------------------NTTSVVLLTQKLLPLLKNAASK  134 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH---------------------HTHHHHHHHHHTHHHHHHHHHS
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHH---------------------HhhhHHHHHHHHHHHHHHhccC
Confidence                 38999999997531 1    111112222222                     2244566677777666543210


Q ss_pred             ------CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          146 ------PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       146 ------~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                            ....+++.+..+.....      ..............|..+|.+...+++.++.+|++.+|+||+|+||...++
T Consensus       135 ~~~~~~~~~~~~~i~~s~~~~~~------~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~  208 (250)
T d1yo6a1         135 ESGDQLSVSRAAVITISSGLGSI------TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN  208 (250)
T ss_dssp             SCSSCCCTTTCEEEEECCGGGCS------TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred             CCCccccceeccccccccccccc------cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC
Confidence                  00011222211111000      000011223344679999999999999999999999999999999987665


Q ss_pred             c
Q 044721          220 T  220 (263)
Q Consensus       220 ~  220 (263)
                      .
T Consensus       209 m  209 (250)
T d1yo6a1         209 L  209 (250)
T ss_dssp             -
T ss_pred             C
Confidence            4

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.2e-19  Score=147.70  Aligned_cols=151  Identities=21%  Similarity=0.273  Sum_probs=113.8

Q ss_pred             CeE-EEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh----hhhccCCcEEEEccCCCHHHHHHHhc--Cc
Q 044721            5 SKI-LFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL----DHFKKLGVNLVIGDVLNHESLVKAIK--QV   77 (263)
Q Consensus         5 ~~i-lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~--~~   77 (263)
                      ||| ||||||||||++++++|+++||+|++++|..+.....+.+.+    ......+++++.+|++|.+.+.+++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            567 999999999999999999999999999997643222222211    11113468899999999999999886  67


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcc---eeee-cc---ccCC----CCccccCCCCchHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIK---RFFP-SE---FGND----VDRVHAVEPAKSAFA  131 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~---~~i~-S~---~g~~----~~~~~~~~~~~~~~~  131 (263)
                      ++++|+++...               +.++.++++++.+.+ +.   ++|+ ||   ||..    .+|+.+.+|.++|+.
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~  159 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGA  159 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHH
Confidence            89999988764               235688999999987 53   5664 43   5542    356777888999999


Q ss_pred             HHHHHHHHHH----HcCCCEEEEeccCch
Q 044721          132 TKAKIRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       132 ~k~~~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      +|.++|+++.    +.++++++.|+.+..
T Consensus       160 sK~~aE~~~~~~~~~~~~~~~ilr~~~vy  188 (347)
T d1t2aa_         160 AKLYAYWIVVNFREAYNLFAVNGILFNHE  188 (347)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence            9999999984    458999999977643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1e-20  Score=152.98  Aligned_cols=83  Identities=17%  Similarity=0.175  Sum_probs=65.0

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      ++++|++|||||+|  +||+++++.|+++|++|++++|+..     ..+.++++  .......+..|+.+..++.+.+. 
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-----LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAE   76 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHHhhcCCcceeecccchHHHHHHHHHH
Confidence            57899999999998  8999999999999999999999842     22222221  13457788899999888777664 


Q ss_pred             ------CcCEEEEcCCCcc
Q 044721           76 ------QVDVVISTVGHTL   88 (263)
Q Consensus        76 ------~~d~vv~~a~~~~   88 (263)
                            .+|++||+++...
T Consensus        77 ~~~~~~~~d~~v~~a~~~~   95 (258)
T d1qsga_          77 LGKVWPKFDGFVHSIGFAP   95 (258)
T ss_dssp             HHTTCSSEEEEEECCCCCC
T ss_pred             hhhcccccceEEEeecccc
Confidence                  6799999998764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.4e-20  Score=152.81  Aligned_cols=178  Identities=15%  Similarity=0.092  Sum_probs=124.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCC-cchh-hhhhhh--ccCCcEEEEccCCCHHHHHHHhc----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-PSKS-QLLDHF--KKLGVNLVIGDVLNHESLVKAIK----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----   75 (263)
                      .|++|||||+++||+++++.|+++|++|+.+.+...... .++. +..+.+  ...++..+.+|++|+++++++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            467899999999999999999999988665544321110 1111 122222  23468899999999999988875    


Q ss_pred             -CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEE
Q 044721           76 -QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYG  150 (263)
Q Consensus        76 -~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~g  150 (263)
                       .+|++|||+|......    .....+...+.+                     ....+..++..+..+.++.+     |
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN---------------------~~g~~~~~~~~lp~m~~~~~-----G  135 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVN---------------------VVGTVRMLQAFLPDMKRRGS-----G  135 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHHTC-----E
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcc---------------------hhHHHHHHHHHHHHHHHcCC-----C
Confidence             5899999998775221    111222222222                     23456668877777776654     7


Q ss_pred             eccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhc
Q 044721          151 DVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       151 r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~  220 (263)
                      +++|++|..             +..+......|.++|++...+++.++.|+++++|+||+|+||+..++.
T Consensus       136 ~Iv~isS~~-------------g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~  192 (285)
T d1jtva_         136 RVLVTGSVG-------------GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (285)
T ss_dssp             EEEEEEEGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ceEEEechh-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence            777776665             555666777888999998889999999999999999999999876643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.80  E-value=3.8e-20  Score=150.91  Aligned_cols=85  Identities=14%  Similarity=0.121  Sum_probs=66.7

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc---
Q 044721            1 MASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         1 m~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      |+++|++|||||+|  +||+++++.|+++|++|++++|+...  .+..+.+... .....+...|+++.++++++++   
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~--~~~~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL--EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHhh-CCceeEeeecccchhhHHHHHHHHH
Confidence            67899999999876  89999999999999999999998421  1222222222 3567788999999988877764   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          .+|++|||+|...
T Consensus        79 ~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             HHTSCEEEEEECCCCCC
T ss_pred             HHcCCCCeEEeeccccc
Confidence                7999999999764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.80  E-value=1.4e-18  Score=143.25  Aligned_cols=156  Identities=51%  Similarity=0.783  Sum_probs=125.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      +++|||||||||+||++++++|+++|++|++++|+.......+.+....+...+++++++|+.|.+++.+.+.+++.+++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            45789999999999999999999999999999998655433444445555567899999999999999999999999999


Q ss_pred             cCCCcc----chhHHHHHHHHHHhCCcceeeeccccCCCCc-cccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchh
Q 044721           83 TVGHTL----LGDQVKIIAAIKEAGNIKRFFPSEFGNDVDR-VHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGS  157 (263)
Q Consensus        83 ~a~~~~----~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~-~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~  157 (263)
                      +++...    .....++++++.+.+..+++++|+++...+. ..+..+...++..+..++++.+..+++|++.|..++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g  161 (312)
T d1qyda_          82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG  161 (312)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred             hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence            987654    4456788888888873556667888765433 34455677888999999999999999999988776544


Q ss_pred             H
Q 044721          158 L  158 (263)
Q Consensus       158 ~  158 (263)
                      .
T Consensus       162 ~  162 (312)
T d1qyda_         162 Y  162 (312)
T ss_dssp             H
T ss_pred             C
Confidence            3

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.79  E-value=1.2e-18  Score=147.34  Aligned_cols=149  Identities=22%  Similarity=0.319  Sum_probs=108.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      |+|||||||||||++|++.|++.|++|++..++....  ...+.+..+ ...+++++++|++|...+.++++  ++|+||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc--ccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            5899999999999999999999999866554432211  111112222 24578999999999999999887  689999


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHhC--------Ccceeee-cc---ccCCC--------------Ccc
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEAG--------NIKRFFP-SE---FGNDV--------------DRV  120 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~~--------~~~~~i~-S~---~g~~~--------------~~~  120 (263)
                      |+|+...               +.++.++++++.+.+        .++++++ ||   ||...              .+.
T Consensus        79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~  158 (361)
T d1kewa_          79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence            9998765               234678888887764        0346764 43   44321              133


Q ss_pred             ccCCCCchHHHHHHHHHHHHH----HcCCCEEEEeccCc
Q 044721          121 HAVEPAKSAFATKAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       121 ~~~~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      .+.+|.+.|+.+|.+.|.++.    +.++++++.|+.+.
T Consensus       159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~v  197 (361)
T d1kewa_         159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNN  197 (361)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCce
Confidence            455678889999999999985    46999999998764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.79  E-value=1.3e-18  Score=145.94  Aligned_cols=151  Identities=17%  Similarity=0.161  Sum_probs=118.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh----hhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL----DHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      ++|+|||||||||||++++++|.++|++|++++|..... .......    ......++.++.+|..|.........+.+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            468999999999999999999999999999999754321 1111111    11123568899999999999999999999


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~  135 (263)
                      .++|+++...               +.++.+++++|.+.+ ++++|+ |+   ||..    .+|+.+.+|.+.|+.+|.+
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~  172 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV  172 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHH
Confidence            9999988654               345789999999999 988885 43   4432    3567788899999999999


Q ss_pred             HHHHHH----HcCCCEEEEeccCc
Q 044721          136 IRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       136 ~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      .|++++    +.++++++.|+.++
T Consensus       173 ~E~~~~~~~~~~~i~~~ilR~~~v  196 (341)
T d1sb8a_         173 NELYADVFSRCYGFSTIGLRYFNV  196 (341)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCE
T ss_pred             HHHHHHHHHHHhCCCeEEEEecee
Confidence            999884    45899999997664

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.79  E-value=1.2e-20  Score=154.68  Aligned_cols=196  Identities=15%  Similarity=0.079  Sum_probs=110.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEE-----------------EEccCCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL-----------------VIGDVLN   66 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~D~~~   66 (263)
                      +.+++||||+++||+++++.|+++|++|++++|+.........+.+..........                 ..+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            45789999999999999999999999999988874211001111112111222333                 3456888


Q ss_pred             HHHHHHHhc-------CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee--ccccCCCCccccCCCCchHHHHHHHHH
Q 044721           67 HESLVKAIK-------QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP--SEFGNDVDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        67 ~~~~~~~~~-------~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~--S~~g~~~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      .++++++++       ++|++|||||........+.-+.    . ......  .............+...+|+.+|....
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  156 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED----G-HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  156 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC------------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHH----H-hhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccc
Confidence            888887764       79999999997642110000000    0 000000  000000000000111345556666555


Q ss_pred             HHHHHcCC-CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCc
Q 044721          138 RAVEAEGI-PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKS  216 (263)
Q Consensus       138 ~~~~~~~~-~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~  216 (263)
                      .+...... .-..+++.+..+..             ...+..+...|..+|++...++|.++.+|++++||||+|+||+.
T Consensus       157 ~~~~~~~~~~~~~~~ii~~~s~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         157 RVAGTPAKHRGTNYSIINMVDAM-------------TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTT-------------TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             hhhhhHHHhcCCCCccccccccc-------------ccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence            44321100 00012222222221             33456677899999999999999999999999999999999964


Q ss_pred             c
Q 044721          217 A  217 (263)
Q Consensus       217 ~  217 (263)
                      .
T Consensus       224 ~  224 (284)
T d1e7wa_         224 V  224 (284)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.79  E-value=1.3e-18  Score=148.64  Aligned_cols=151  Identities=20%  Similarity=0.199  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEc------------CCCCCCcch---hhhhhhhccCCcEEEEccCCCHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR------------ESTLSAPSK---SQLLDHFKKLGVNLVIGDVLNHE   68 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r------------~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~   68 (263)
                      ||+|||||||||||+++++.|+++||+|++++.            .........   ......+...+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            689999999999999999999999999999861            100000111   11222333567999999999999


Q ss_pred             HHHHHhc--CcCEEEEcCCCcc------------------chhHHHHHHHHHHhCCcce-eee-cc---ccCCC------
Q 044721           69 SLVKAIK--QVDVVISTVGHTL------------------LGDQVKIIAAIKEAGNIKR-FFP-SE---FGNDV------  117 (263)
Q Consensus        69 ~~~~~~~--~~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~~~~~-~i~-S~---~g~~~------  117 (263)
                      .++++++  ++|+|||+|+...                  +.++.++++++.+.+ +++ +++ |+   |+...      
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~~  159 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEG  159 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc-cccceeeccccccccccccccccc
Confidence            9999998  5799999998643                  345789999999998 665 443 33   22111      


Q ss_pred             -----------CccccCCCCchHHHHHHHHHHHH----HHcCCCEEEEeccCc
Q 044721          118 -----------DRVHAVEPAKSAFATKAKIRRAV----EAEGIPYTYGDVLNH  155 (263)
Q Consensus       118 -----------~~~~~~~~~~~~~~~k~~~e~~~----~~~~~~~~~gr~~n~  155 (263)
                                 ++..+..|.+.|+.+|..+|.++    ++.++++++.|..+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v  212 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVV  212 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccc
Confidence                       11234567788999999999988    466899998886654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.79  E-value=3e-18  Score=142.30  Aligned_cols=147  Identities=19%  Similarity=0.201  Sum_probs=113.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      |+|||||||||||++++++|+++||+|++++|..........   +.+ ..+++.++.+|++|.+.+.+.+.  ..++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL---RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH---HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH---HHhcccCCcEEEEccccChHHhhhhhccccccccc
Confidence            689999999999999999999999999999998643222222   222 23568999999999999998776  567888


Q ss_pred             EcCCCcc---------------chhHHHHHHHHHHhCCcc-eeee-cc---ccCC----CCccccCCCCchHHHHHHHHH
Q 044721           82 STVGHTL---------------LGDQVKIIAAIKEAGNIK-RFFP-SE---FGND----VDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        82 ~~a~~~~---------------~~~~~~l~~~~~~~~~~~-~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      |+++...               +.++.++++++.+.+ ++ ++++ |+   ++..    .+|..+.+|.+.|+.+|.+.|
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  156 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH  156 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhC-CCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHH
Confidence            8887664               345688999999998 55 5554 32   3322    245667788999999999999


Q ss_pred             HHHH----HcCCCEEEEeccCc
Q 044721          138 RAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       138 ~~~~----~~~~~~~~gr~~n~  155 (263)
                      ++++    +.++++++.|+.|.
T Consensus       157 ~~~~~~~~~~~~~~~~lr~~~v  178 (321)
T d1rpna_         157 WITVNYRESFGLHASSGILFNH  178 (321)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCE
T ss_pred             HHHHHHHhhcCCcEEEEEEecc
Confidence            9985    46899999998764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.78  E-value=2.1e-20  Score=151.89  Aligned_cols=83  Identities=19%  Similarity=0.177  Sum_probs=65.2

Q ss_pred             CCCCCeEEEEcCC--ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchh-hhhhhhccCCcEEEEccCCCHHHHHHHhc--
Q 044721            1 MASKSKILFIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         1 m~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ||++|+++||||+  .+||+++++.|+++|++|++++|+.     ++. +.+.+....+...+++|++++++++++++  
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~-----~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-----LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSC-----HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCCh-----HHHHHHHHHHcCCceeeEeeecccccccccccchh
Confidence            6889999999964  5799999999999999999999983     332 22333335667889999999877666543  


Q ss_pred             --------CcCEEEEcCCCcc
Q 044721           76 --------QVDVVISTVGHTL   88 (263)
Q Consensus        76 --------~~d~vv~~a~~~~   88 (263)
                              .+|+++||+|...
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~   98 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMP   98 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCC
T ss_pred             hhccccCCCcceeeecccccC
Confidence                    4799999999653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=2.6e-18  Score=143.69  Aligned_cols=153  Identities=20%  Similarity=0.281  Sum_probs=109.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh----hhhccCCcEEEEccCCCHHHHHHHhc--Cc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL----DHFKKLGVNLVIGDVLNHESLVKAIK--QV   77 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~--~~   77 (263)
                      .|++||||||||||++|++.|+++||+|++++|..+.....+...+    .......+.++.+|+.+.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            4789999999999999999999999999999997543222222211    11223457889999999999999886  78


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhC----Ccceeee-cc---ccC---CCCccccCCCCchHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAG----NIKRFFP-SE---FGN---DVDRVHAVEPAKSAFA  131 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~----~~~~~i~-S~---~g~---~~~~~~~~~~~~~~~~  131 (263)
                      |+|||+|+...               ...+.++++++....    ...+++. |+   ++.   ..+|+.+..|.+.|+.
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            99999999865               223456666665543    0223443 32   121   2356777888999999


Q ss_pred             HHHHHHHHH----HHcCCCEEEEeccCch
Q 044721          132 TKAKIRRAV----EAEGIPYTYGDVLNHG  156 (263)
Q Consensus       132 ~k~~~e~~~----~~~~~~~~~gr~~n~~  156 (263)
                      +|...|+++    +..++++++.|+.+..
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vy  189 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHE  189 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence            999999987    4568999999987753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2.2e-20  Score=151.11  Aligned_cols=177  Identities=14%  Similarity=0.093  Sum_probs=119.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHH---CCCCEEEEEcCCCCCCcchhhhh-hhh----ccCCcEEEEccCCCHHHHHHH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVK---AGHPTFVLVRESTLSAPSKSQLL-DHF----KKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      +++|+++||||+++||+++++.|++   +|++|++++|+     .++++.+ +++    .+.++..+.+|++|+++++++
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l   78 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            4688999999999999999999986   79999999998     4444422 222    133578899999999998887


Q ss_pred             hc-----------CcCEEEEcCCCccc-------hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHH
Q 044721           74 IK-----------QVDVVISTVGHTLL-------GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        74 ~~-----------~~d~vv~~a~~~~~-------~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~  135 (263)
                      ++           .+|++|||||....       .....-++.+.+.+                     ...++..++..
T Consensus        79 ~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN---------------------~~~~~~l~~~~  137 (259)
T d1oaaa_          79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALN---------------------LTSMLCLTSGT  137 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHH---------------------THHHHHHHHHH
T ss_pred             HHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHh---------------------hhhhHHHHHHH
Confidence            63           46799999986431       00111122222221                     13345556655


Q ss_pred             HHHHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCC
Q 044721          136 IRRAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAK  215 (263)
Q Consensus       136 ~e~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~  215 (263)
                      ...+.++.+   ..|+++|+++..             +..+..+...|.++|++...++|.++.|  ..+||||+|+||+
T Consensus       138 ~~~m~~~~~---~~g~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~  199 (259)
T d1oaaa_         138 LNAFQDSPG---LSKTVVNISSLC-------------ALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGP  199 (259)
T ss_dssp             HHTSCCCTT---CEEEEEEECCGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCS
T ss_pred             HHHHHhcCC---Cccccccccccc-------------ccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCC
Confidence            554433321   134555555544             4455566677888888877788888887  5789999999999


Q ss_pred             cchhcHH
Q 044721          216 SAFVTKA  222 (263)
Q Consensus       216 ~~~~~~~  222 (263)
                      ..++...
T Consensus       200 i~T~~~~  206 (259)
T d1oaaa_         200 LDNDMQQ  206 (259)
T ss_dssp             BSSHHHH
T ss_pred             CCCHHHH
Confidence            8876543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.3e-18  Score=141.94  Aligned_cols=150  Identities=21%  Similarity=0.270  Sum_probs=112.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCC-----CCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--Cc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTL-----SAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QV   77 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~   77 (263)
                      |||||||||||||++|++.|+++|++|+++++....     ......+........++.++++|++|.+.+++++.  .+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            799999999999999999999999999999863221     11222333344456789999999999999999886  46


Q ss_pred             CEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC-----CccccCCCCchHHHHH
Q 044721           78 DVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV-----DRVHAVEPAKSAFATK  133 (263)
Q Consensus        78 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~-----~~~~~~~~~~~~~~~k  133 (263)
                      ++++|+|+..+               +.++.++++++.+.+ ++++++ |+   ++...     .+.....+.++|+.+|
T Consensus        83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccccccccccccCChHHHHH
Confidence            68999999765               344688999999999 999885 32   33322     1122334577899999


Q ss_pred             HHHHHHHHH-----cCCCEEEEeccCc
Q 044721          134 AKIRRAVEA-----EGIPYTYGDVLNH  155 (263)
Q Consensus       134 ~~~e~~~~~-----~~~~~~~gr~~n~  155 (263)
                      ...|+.+++     .+++++..|..+.
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v  188 (346)
T d1ek6a_         162 FFIEEMIRDLCQADKTWNAVLLRYFNP  188 (346)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHhccCCceEEEeecce
Confidence            999988753     4888888876654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.77  E-value=2.9e-18  Score=142.73  Aligned_cols=149  Identities=19%  Similarity=0.285  Sum_probs=113.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEE------EEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTF------VLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      |+||||||||+||+++++.|+++|++|.      .+++...........  ......++.++.+|+.+..........+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA--PVDADPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG--GGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh--hhhcCCCeEEEEeccccchhhhccccccc
Confidence            6899999999999999999999998654      333322111111111  11124578999999999999999999999


Q ss_pred             EEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-cc---ccCC----CCccccCCCCchHHHHHHH
Q 044721           79 VVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGND----VDRVHAVEPAKSAFATKAK  135 (263)
Q Consensus        79 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~----~~~~~~~~~~~~~~~~k~~  135 (263)
                      .|+|+|+...               +..+.++++++.+.+ ++++|+ |+   |+..    .+|+.+..|.+.|+.+|..
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            9999998764               345789999999999 998885 43   4432    3567778889999999999


Q ss_pred             HHHHHH----HcCCCEEEEeccCch
Q 044721          136 IRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       136 ~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      .|.+++    +.++++++.|+.+..
T Consensus       158 ~E~~~~~~~~~~~~~~~~lR~~~vy  182 (322)
T d1r6da_         158 SDLVARAYHRTYGLDVRITRCCNNY  182 (322)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEE
Confidence            999884    558999999977753

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.77  E-value=3.9e-18  Score=139.77  Aligned_cols=154  Identities=61%  Similarity=0.912  Sum_probs=126.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCC-cchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-PSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++||||||||||+||++++++|+++|++|++++|++.... ..+...+..+...++.++.+|+.+..++.+.+++++.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            5789999999999999999999999999999999865432 223333445556678999999999999999999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccCchh
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLNHGS  157 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n~~~  157 (263)
                      |+++........++++++...+ +++++ .|+++...++.....+...+...+...+.++++.++++++.|..+..+
T Consensus        82 ~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g  157 (307)
T d1qyca_          82 STVGSLQIESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG  157 (307)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHH
T ss_pred             ecccccccchhhHHHHHHHHhc-cccceeeeccccccccccccccccccccccccccchhhccCCCceecccceecC
Confidence            9999888888889999999998 77666 477777665555555556677788899999999999999999777644

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1e-19  Score=147.95  Aligned_cols=174  Identities=13%  Similarity=0.082  Sum_probs=119.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hh---hccCCcEEEEccCCCHHHHHHHhc-
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DH---FKKLGVNLVIGDVLNHESLVKAIK-   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~~~~D~~~~~~~~~~~~-   75 (263)
                      |+++|+++|||||++||+++++.|+++|++|++++|+     .++++.+ ++   .....+..+.+|..+.+.+...++ 
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   85 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ   85 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH
Confidence            5688999999999999999999999999999999999     5444422 11   223457788899998877665443 


Q ss_pred             ------CcCEEEEcCCCccchh----HHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           76 ------QVDVVISTVGHTLLGD----QVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        76 ------~~d~vv~~a~~~~~~~----~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                            .+|+++||||......    ...-++...+.+                     ....+..++.....+.+. + 
T Consensus        86 ~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN---------------------~~~~~~~~~~~lp~m~~~-~-  142 (269)
T d1xu9a_          86 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN---------------------FLSYVVLTVAALPMLKQS-N-  142 (269)
T ss_dssp             HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHHHH-T-
T ss_pred             HHHHhCCccccccccccccccccccCCHHHhhhheeee---------------------hhhHHHHHHHHHHHHHhc-C-
Confidence                  6899999998764111    111111111111                     133455566666555333 2 


Q ss_pred             CEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCC--CccccccCCCCCcchh
Q 044721          146 PYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGN--DVDRVNAVEPAKSAFV  219 (263)
Q Consensus       146 ~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vn~v~pg~~~~~  219 (263)
                          |+++|+++..             +..+..+...|.++|++...+++.++.|+++  .+|+||+|+||+..++
T Consensus       143 ----G~ii~isS~~-------------~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~  201 (269)
T d1xu9a_         143 ----GSIVVVSSLA-------------GKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  201 (269)
T ss_dssp             ----CEEEEEEEGG-------------GTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             ----CcceEeccch-------------hcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence                4555544443             5556667778888888887789999999874  5799999999976654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.9e-19  Score=146.91  Aligned_cols=144  Identities=17%  Similarity=0.266  Sum_probs=102.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      .|+||||||+||||+++++.|+++|++|++++|..... .....  ......++.....|+     ++.++.++|+|||+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~-~~~~~--~~~~~~~~d~~~~~~-----~~~~~~~~d~Vihl   72 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNVE--HWIGHENFELINHDV-----VEPLYIEVDQIYHL   72 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGTG--GGTTCTTEEEEECCT-----TSCCCCCCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCC-HHHHH--HhcCCCceEEEehHH-----HHHHHcCCCEEEEC
Confidence            47999999999999999999999999999998754321 11111  111122344454444     34466789999999


Q ss_pred             CCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCCC---------CccccCCCCchHHHHHHHH
Q 044721           84 VGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGNDV---------DRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        84 a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~~---------~~~~~~~~~~~~~~~k~~~  136 (263)
                      |+...               +.++.++++++.+.+ ++.++.||   |+...         .+..+.+|.+.|+.+|.++
T Consensus        73 Aa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~  151 (312)
T d2b69a1          73 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  151 (312)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             cccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHH
Confidence            98754               234689999999998 86555554   44321         1224556788999999999


Q ss_pred             HHHHH----HcCCCEEEEeccCch
Q 044721          137 RRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       137 e~~~~----~~~~~~~~gr~~n~~  156 (263)
                      |.+++    +.++++++.|+.+..
T Consensus       152 E~~~~~~~~~~~~~~~~lR~~~vy  175 (312)
T d2b69a1         152 ETMCYAYMKQEGVEVRVARIFNTF  175 (312)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEE
T ss_pred             HHHHHHHHHHhCCcEEEEEeeeEE
Confidence            99984    558999999977754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=7.4e-20  Score=146.29  Aligned_cols=198  Identities=19%  Similarity=0.124  Sum_probs=124.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc------Cc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK------QV   77 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~   77 (263)
                      .|++|||||+++||+++++.|+++|++|++++|+.+.              .+....++|+++......+..      ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhhccccc
Confidence            4899999999999999999999999999999998431              235667899998776665543      44


Q ss_pred             CEEEEcCCCccch--------hHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHc-CCCEE
Q 044721           78 DVVISTVGHTLLG--------DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAE-GIPYT  148 (263)
Q Consensus        78 d~vv~~a~~~~~~--------~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~-~~~~~  148 (263)
                      +.++++++.....        ......+...+.+                     ....+..++.....+.+.. ...-.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~~~~~~~~~~~~  125 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVN---------------------LLGTFNVLRLAAWAMRENPPDAEGQ  125 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHH---------------------THHHHHHHHHHHHHHTTCCCCTTSC
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHH---------------------hhhhHHHHHHHHHHhhhhhhhcccC
Confidence            5666665543200        0001111111111                     0122223333333221110 01111


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchhcHHHHHHHH
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFVTKAKIRRAV  228 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~~~~~~~~~~  228 (263)
                      .|+++|++|..             +..+..+...|..+|.+...++|.++.||++++||||+|+||+..++.........
T Consensus       126 ~G~Ii~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~  192 (241)
T d1uaya_         126 RGVIVNTASVA-------------AFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA  192 (241)
T ss_dssp             SEEEEEECCTH-------------HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH
T ss_pred             ceeeeeecchh-------------hccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH
Confidence            47777776666             34455677899999999999999999999999999999999988765433221111


Q ss_pred             HHcCCCeeEEeccccccc-ccCCCCCCCCCCC
Q 044721          229 EAEGIPYTYVASNFFAGY-FLPNLSQPGATAP  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~  259 (263)
                      ...          ..... +.+|+++|+|+|.
T Consensus       193 ~~~----------~~~~~~~~~R~g~pedvA~  214 (241)
T d1uaya_         193 KAS----------LAAQVPFPPRLGRPEEYAA  214 (241)
T ss_dssp             HHH----------HHTTCCSSCSCCCHHHHHH
T ss_pred             HHH----------HHhcCCCCCCCcCHHHHHH
Confidence            110          11122 3478888888764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.1e-17  Score=140.09  Aligned_cols=142  Identities=22%  Similarity=0.331  Sum_probs=105.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH-HhcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK-AIKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vv~   82 (263)
                      |||||||||||||++++++|+++| ++|+++++...     ...  .....++++++++|+++.+++.+ +++++|+|||
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~-----~~~--~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih   73 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD-----AIS--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG-----GGG--GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc-----chh--hhccCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence            589999999999999999999999 48999887632     211  11124679999999998766544 7778999999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCCCC-----------ccccCCCCchHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGNDVD-----------RVHAVEPAKSAFATK  133 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~~~-----------~~~~~~~~~~~~~~k  133 (263)
                      +|+...               +.++.++++++.+.+ ++.++.|+   |+....           +.....|...|+.+|
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK  152 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             ccccccccccccCCcccccccccccccccccccccc-ccccccccccccccccccccccccccccccccCCCcchhhhcc
Confidence            999865               345789999999998 88777543   333211           112234567799999


Q ss_pred             HHHHHHHH----HcCCCEEEEeccC
Q 044721          134 AKIRRAVE----AEGIPYTYGDVLN  154 (263)
Q Consensus       134 ~~~e~~~~----~~~~~~~~gr~~n  154 (263)
                      ..+|++++    +.++++++.|..+
T Consensus       153 ~~~E~~~~~~~~~~~~~~~i~r~~~  177 (342)
T d2blla1         153 QLLDRVIWAYGEKEGLQFTLFRPFN  177 (342)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECS
T ss_pred             cchhhhhhhhhcccCceeEEeeccc
Confidence            99999884    4589999887554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.76  E-value=2.3e-19  Score=144.73  Aligned_cols=197  Identities=15%  Similarity=0.082  Sum_probs=110.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh--------c
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI--------K   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~   75 (263)
                      ||+|+||||+++||+++++.|+++|++|++++|+...                   ...|+.+.+......        .
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998321                   134666655444332        2


Q ss_pred             CcCEEEEcCCCccchh------------H----HHHHHHHHHhCCcceee-ecc-ccCCCCccccCCCCchHHHHHHHHH
Q 044721           76 QVDVVISTVGHTLLGD------------Q----VKIIAAIKEAGNIKRFF-PSE-FGNDVDRVHAVEPAKSAFATKAKIR  137 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~------------~----~~l~~~~~~~~~~~~~i-~S~-~g~~~~~~~~~~~~~~~~~~k~~~e  137 (263)
                      .+|+++||||......            .    ....+...+.. ..... ++. ........     ...+.....   
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---  132 (257)
T d1fjha_          62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFD-----KNPLALALE---  132 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGG-----GCTTHHHHH---
T ss_pred             CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhh-----hhhhhhhcc---
Confidence            5899999998654111            1    11222222222 22222 111 11100000     011111100   


Q ss_pred             HHHHHcCCCEEEEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcc
Q 044721          138 RAVEAEGIPYTYGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSA  217 (263)
Q Consensus       138 ~~~~~~~~~~~~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~  217 (263)
                                 .|++.++.+...            ..........|..+|++...++|.++.||++++||||+|+||+..
T Consensus       133 -----------~g~~~~i~s~~~------------~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~  189 (257)
T d1fjha_         133 -----------AGEEAKARAIVE------------HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATE  189 (257)
T ss_dssp             -----------HTCHHHHHHHHH------------TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--
T ss_pred             -----------CCcEEEEeeehh------------ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcC
Confidence                       023333333221            112334567799999999899999999999999999999999877


Q ss_pred             hhcHHHHHHHHHHcCCCeeEEeccccc-ccccCCCCCCCCCCC
Q 044721          218 FVTKAKIRRAVEAEGIPYTYVASNFFA-GYFLPNLSQPGATAP  259 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~  259 (263)
                      ++.....   .......     ..... ..+++|+++|+|+|.
T Consensus       190 T~~~~~~---~~~~~~~-----~~~~~~~~PlgR~g~p~eva~  224 (257)
T d1fjha_         190 TPLLQAG---LQDPRYG-----ESIAKFVPPMGRRAEPSEMAS  224 (257)
T ss_dssp             ---------------------------CCCSTTSCCCTHHHHH
T ss_pred             ChhHHhh---cCCHHHH-----HHHHhcCCCCCCCcCHHHHHH
Confidence            6543322   1111111     11111 248999999999864

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=7.3e-19  Score=140.08  Aligned_cols=165  Identities=13%  Similarity=0.020  Sum_probs=110.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-------hc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-------IK   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-------~~   75 (263)
                      ++|+|+||||+|+||+++++.|+++|++|++++++....            ......+..|..+.++.+..       +.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            479999999999999999999999999999999874321            11122334555544443322       22


Q ss_pred             --CcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEE
Q 044721           76 --QVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYT  148 (263)
Q Consensus        76 --~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  148 (263)
                        ++|++|||||....     ......++...+.+ +                    ...+..+|.....+ ++      
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n-~--------------------~~~~~~~~~~~~~m-~~------  120 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQS-I--------------------WTSTISSHLATKHL-KE------  120 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHH-H--------------------HHHHHHHHHHHHHE-EE------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHc-c--------------------hHHHHHHHHHHHhc-cc------
Confidence              58999999985421     11222223222222 0                    22344455544433 22      


Q ss_pred             EEeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCC--CCccccccCCCCCcchhc
Q 044721          149 YGDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFG--NDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       149 ~gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vn~v~pg~~~~~~  220 (263)
                      -|+++|+++..             +..+..+...|.++|++...++|.++.||+  +.+||||+|+||+..++.
T Consensus       121 ~G~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~  181 (236)
T d1dhra_         121 GGLLTLAGAKA-------------ALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  181 (236)
T ss_dssp             EEEEEEECCGG-------------GGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             ccceeEEccHH-------------HcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc
Confidence            36777766655             445566778899999998889999999998  589999999999877654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.73  E-value=6.2e-17  Score=137.72  Aligned_cols=152  Identities=20%  Similarity=0.284  Sum_probs=110.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEcCCC-----CCCcchhhhh---hh-------hccCCcEEEEccCCCH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVK-AGHPTFVLVREST-----LSAPSKSQLL---DH-------FKKLGVNLVIGDVLNH   67 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~-----~~~~~~~~~~---~~-------~~~~~~~~~~~D~~~~   67 (263)
                      .|+||||||+||||++|+++|++ .|++|+++++-..     .....+.+..   ..       .......++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            57999999999999999999996 6899999874111     0001111111   10       1123578899999999


Q ss_pred             HHHHHHhc---CcCEEEEcCCCcc---------------chhHHHHHHHHHHhCCcceeee-c---cccCC---------
Q 044721           68 ESLVKAIK---QVDVVISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFP-S---EFGND---------  116 (263)
Q Consensus        68 ~~~~~~~~---~~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-S---~~g~~---------  116 (263)
                      +.++++++   ++|+|||+|+...               ...+.++++++.+.+ ++++++ |   .++..         
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccccccccccccccc
Confidence            99999885   6799999999764               344688999999999 888873 2   22211         


Q ss_pred             --CCccccCCCCchHHHHHHHHHHHHH----HcCCCEEEEeccCch
Q 044721          117 --VDRVHAVEPAKSAFATKAKIRRAVE----AEGIPYTYGDVLNHG  156 (263)
Q Consensus       117 --~~~~~~~~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n~~  156 (263)
                        ..++.+.+|.+.|+.+|...|++++    ..++++++.|..+..
T Consensus       161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vy  206 (383)
T d1gy8a_         161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC  206 (383)
T ss_dssp             CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred             cccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceee
Confidence              1234556788999999999999985    458999999977743

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.72  E-value=6.7e-18  Score=141.69  Aligned_cols=134  Identities=19%  Similarity=0.192  Sum_probs=99.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-----ccCCcEEEEccCCCHHHHHHHhcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-----KKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      .++|+||||||+||||+++++.|+++|++|+++.|+     ..+...+...     .......+.+|+.|.+++.+++.+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   83 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC-----chhHHHHHHhhhccccccccEEEeccccchhhhhhhccc
Confidence            357999999999999999999999999999999998     3333222111     112244577999999999999999


Q ss_pred             cCEEEEcCCCcc------------chhHHHHHHHHHHhCCcceeee-ccccCCC--------------------------
Q 044721           77 VDVVISTVGHTL------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDV--------------------------  117 (263)
Q Consensus        77 ~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~--------------------------  117 (263)
                      +|.++|+++...            +.++.++++++.+.+.++++++ ||.....                          
T Consensus        84 ~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  163 (342)
T d1y1pa1          84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             chhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccc
Confidence            999999998764            3457899999988633888885 5532110                          


Q ss_pred             -CccccCCCCchHHHHHHHHHHHH
Q 044721          118 -DRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus       118 -~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                       .+..+.+|..+|+.+|...|.++
T Consensus       164 ~~e~~~~~p~~~Y~~sK~~~E~~~  187 (342)
T d1y1pa1         164 LPESDPQKSLWVYAASKTEAELAA  187 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCcCcccchhHhHHHHH
Confidence             11223345667999999999865

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.72  E-value=6.1e-17  Score=134.90  Aligned_cols=145  Identities=17%  Similarity=0.235  Sum_probs=105.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcC--cCEEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQ--VDVVIS   82 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~vv~   82 (263)
                      ||||||||||||+++++.|+++|++|+++++-...   .....+..+ ...+++++.+|++|.+++.+++++  +|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~---~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK---GATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCST---THHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcc---cchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            79999999999999999999999999998753221   111112222 245789999999999999999974  699999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceee-eccccC---CC---------------------Ccccc
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFF-PSEFGN---DV---------------------DRVHA  122 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~---~~---------------------~~~~~  122 (263)
                      +|+...               +.++.++++++.+.+ +++++ +||...   ..                     .+..+
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ  157 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCc
Confidence            998765               345789999999999 76654 443221   10                     12234


Q ss_pred             CCCCchHHHHHHHHHHHHH----HcCCCEEEEeccC
Q 044721          123 VEPAKSAFATKAKIRRAVE----AEGIPYTYGDVLN  154 (263)
Q Consensus       123 ~~~~~~~~~~k~~~e~~~~----~~~~~~~~gr~~n  154 (263)
                      ..|...|+.+|...|.++.    ..+......+..+
T Consensus       158 ~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~  193 (338)
T d1orra_         158 LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSS  193 (338)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             cccccccccccchhhhhhhhhhhccCcccccccccc
Confidence            4567889999999988763    4566666655443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.72  E-value=2.5e-19  Score=145.26  Aligned_cols=196  Identities=19%  Similarity=0.125  Sum_probs=102.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC----HHHHHHH-------
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN----HESLVKA-------   73 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~-------   73 (263)
                      .++|||||+++||+++++.|+++|++|++++|+.+...+...+.+......+......|..+    .+.++++       
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999843210111112222224456666665543    3334333       


Q ss_pred             hcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEecc
Q 044721           74 IKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVL  153 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~  153 (263)
                      +.++|++|||||.................  ........    .......+....+...+.....+.......-..+.+.
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAA--DAKPIDAQ----VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  155 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-------------CHHHH----HHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             hCCCCEEEECCccCCCCcccccccccchh--cccccccc----cccccccccccccchhhhhccccccccccccccccch
Confidence            34799999999976421100000000000  00000000    0000000000011111111111100000000001111


Q ss_pred             CchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCCCCccccccCCCCCcchh
Q 044721          154 NHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVNAVEPAKSAFV  219 (263)
Q Consensus       154 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vn~v~pg~~~~~  219 (263)
                      +..             ...+.....+...|..+|.+...++|.++.+|++++||||+|+||+..++
T Consensus       156 ~~~-------------~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~  208 (266)
T d1mxha_         156 NLC-------------DAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  208 (266)
T ss_dssp             EEC-------------CGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             hhh-------------hccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecc
Confidence            111             11234566678899999999989999999999999999999999986654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=2.3e-17  Score=136.63  Aligned_cols=129  Identities=15%  Similarity=0.154  Sum_probs=98.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      +|+|||||||||||++|+++|+++|+.|+++++..                      ..|+.|.+.+.++++  .+|.++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~d~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhcCCCEEE
Confidence            57999999999999999999999999887655431                      258899999988876  689999


Q ss_pred             EcCCCcc----------------chhHHHHHHHHHHhCCcceeee-cc---ccCCC----Cccc-----cCCCCchHHHH
Q 044721           82 STVGHTL----------------LGDQVKIIAAIKEAGNIKRFFP-SE---FGNDV----DRVH-----AVEPAKSAFAT  132 (263)
Q Consensus        82 ~~a~~~~----------------~~~~~~l~~~~~~~~~~~~~i~-S~---~g~~~----~~~~-----~~~~~~~~~~~  132 (263)
                      |+|+...                +..+.++++++.+.+ ++++|+ ||   ||...    +|+.     +..+..+|+.+
T Consensus        60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~s  138 (315)
T d1e6ua_          60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIA  138 (315)
T ss_dssp             ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHH
T ss_pred             EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHH
Confidence            9997653                345689999999999 998885 54   44321    1221     11223569999


Q ss_pred             HHHHHHHHH----HcCCCEEEEeccCc
Q 044721          133 KAKIRRAVE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       133 k~~~e~~~~----~~~~~~~~gr~~n~  155 (263)
                      |.++|++++    +.++++++.|+.+.
T Consensus       139 K~~~E~~~~~~~~~~gl~~~ilR~~~v  165 (315)
T d1e6ua_         139 KIAGIKLCESYNRQYGRDYRSVMPTNL  165 (315)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeccE
Confidence            999999884    55899999997664

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.7e-19  Score=143.92  Aligned_cols=80  Identities=19%  Similarity=0.265  Sum_probs=64.5

Q ss_pred             CCe-EEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCCCCCCcchhh-hhhhhc--cCCcEEEEccCCCHHHHHHHhc---
Q 044721            4 KSK-ILFIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQ-LLDHFK--KLGVNLVIGDVLNHESLVKAIK---   75 (263)
Q Consensus         4 ~~~-ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---   75 (263)
                      +|+ ++||||+++||+++++.|+++ |++|++.+|+     .++.+ ..+++.  ..++.++++|++|.++++++++   
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~   76 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR   76 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHH
Confidence            444 589999999999999999986 8999999999     44443 223332  4578899999999999887765   


Q ss_pred             ----CcCEEEEcCCCcc
Q 044721           76 ----QVDVVISTVGHTL   88 (263)
Q Consensus        76 ----~~d~vv~~a~~~~   88 (263)
                          ++|++|||||...
T Consensus        77 ~~~g~iDiLVnNAGi~~   93 (275)
T d1wmaa1          77 KEYGGLDVLVNNAGIAF   93 (275)
T ss_dssp             HHHSSEEEEEECCCCCC
T ss_pred             HhcCCcEEEEEcCCcCC
Confidence                7999999999864

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.71  E-value=2.8e-16  Score=132.04  Aligned_cols=149  Identities=17%  Similarity=0.205  Sum_probs=108.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      ++|+|||||||||||+++++.|+++|++|++++|+.... +...+.. . ..++++.+.+|++|++.+.++++  .+|++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~-~~~~~~~-~-~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLFETA-R-VADGMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHHHHT-T-TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc-HHHHhhh-h-cccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence            479999999999999999999999999999999986432 1111111 1 13578999999999999999887  67999


Q ss_pred             EEcCCCcc---------------chhHHHHHHHHHHhCCcceeeecccc---C------CCCccccCCCCchHHHHHHHH
Q 044721           81 ISTVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSEFG---N------DVDRVHAVEPAKSAFATKAKI  136 (263)
Q Consensus        81 v~~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~~g---~------~~~~~~~~~~~~~~~~~k~~~  136 (263)
                      +|+|+...               +.++.++++++.+.+..+.+++++..   .      ...+..+..|..+|+.+|...
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~  163 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA  163 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccc
Confidence            99999764               33468899999888724444443211   1      113345566788899999998


Q ss_pred             HHHHH-------------HcCCCEEEEeccC
Q 044721          137 RRAVE-------------AEGIPYTYGDVLN  154 (263)
Q Consensus       137 e~~~~-------------~~~~~~~~gr~~n  154 (263)
                      |..++             ..++.+++.|..+
T Consensus       164 e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  194 (356)
T d1rkxa_         164 ELVTSSYRNSFFNPANYGQHGTAVATVRAGN  194 (356)
T ss_dssp             HHHHHHHHHHHSCGGGHHHHCCEEEEEECCC
T ss_pred             hhhhhHHhhhcccchhccccCceEEeccCCC
Confidence            87764             3456777777555

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.70  E-value=9.4e-18  Score=133.50  Aligned_cols=164  Identities=20%  Similarity=0.112  Sum_probs=109.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH-------Hh--
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK-------AI--   74 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------~~--   74 (263)
                      ..+|+||||+++||+++++.|+++|++|++++|+.....            .....+.+|..+.+....       .+  
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------------cccceeccccCchhHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999853211            112334455554433222       22  


Q ss_pred             cCcCEEEEcCCCccc-----hhHHHHHHHHHHhCCcceeeeccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEE
Q 044721           75 KQVDVVISTVGHTLL-----GDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTY  149 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~-----~~~~~l~~~~~~~~~~~~~i~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~  149 (263)
                      .++|+||||||....     ......++.+.+.+                     ....+..+|.....+ ++      -
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n---------------------~~~~~~~~~~~~~~m-~~------~  121 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQS---------------------VWSSAIAAKLATTHL-KP------G  121 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHE-EE------E
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhH---------------------HHHHHHHhhhccccc-cc------c
Confidence            368999999996431     11122233222222                     023345566655543 22      2


Q ss_pred             EeccCchhHHHHhcccceEEEecCcccchhHHHHHHHHHhcCCceeeccCCCC--CCccccccCCCCCcchhc
Q 044721          150 GDVLNHGSLVKAIKQVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFFPSEFG--NDVDRVNAVEPAKSAFVT  220 (263)
Q Consensus       150 gr~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vn~v~pg~~~~~~  220 (263)
                      |+++|+++..             +..+..+...|.++|.+...+++.++.||+  +.++++|+|+||...++.
T Consensus       122 g~Iv~isS~~-------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         122 GLLQLTGAAA-------------AMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             EEEEEECCGG-------------GGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             eEEEEeccHH-------------hcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence            6666665554             445566778899999998889999999998  588999999999766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.69  E-value=7e-16  Score=129.49  Aligned_cols=144  Identities=19%  Similarity=0.203  Sum_probs=109.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-HHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-ESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vv   81 (263)
                      ++|+|+||||||+||+++++.|+++||+|+++.|+.++.   +...+.  ..++++++++|+.|. +.+..+++++|.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~---~~~~~~--~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---IAEELQ--AIPNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---HHHHHH--TSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh---hhhhhc--ccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            468999999999999999999999999999999985431   111111  235789999999985 45778999999998


Q ss_pred             EcCCCcc---chhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHHHHHHHHHHHcCCCEEEEeccC
Q 044721           82 STVGHTL---LGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGDVLN  154 (263)
Q Consensus        82 ~~a~~~~---~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~~~~~gr~~n  154 (263)
                      ++.....   .....++++++.+.+ +++++ +|+++.....  ...+...++.+|...+.++++.+.+|++.|...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~--~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~  150 (350)
T d1xgka_          77 INTTSQAGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLY--GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI  150 (350)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGT--SSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECE
T ss_pred             eecccccchhhhhhhHHHHHHHHhC-CCceEEEeeccccccC--CcccchhhhhhHHHHHHHHHhhccCceeeeece
Confidence            8765443   556789999999999 66554 6776543221  122345678899999999999999999877443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=3.6e-16  Score=122.15  Aligned_cols=132  Identities=16%  Similarity=0.235  Sum_probs=97.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~   79 (263)
                      ++|+||||||||+||++++++|+++|+  +|++.+|++...            .+.   +..+..|..++.+. ...+|.
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~---~~~~~~d~~~~~~~~~~~~d~   65 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPR---LDNPVGPLAELLPQLDGSIDT   65 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTT---EECCBSCHHHHGGGCCSCCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------ccc---ccccccchhhhhhccccchhe
Confidence            358999999999999999999999997  566666663211            111   23444455544443 346899


Q ss_pred             EEEcCCCcc-------------chhHHHHHHHHHHhCCcceeee-ccccCCCCccccCCCCchHHHHHHHHHHHHHHcCC
Q 044721           80 VISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGI  145 (263)
Q Consensus        80 vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~~~~~~~~~~~~~~~~k~~~e~~~~~~~~  145 (263)
                      +||++|...             +..+.++++++.+.+ ++++++ |+.+....      +.+.|..+|..+|+.+++.++
T Consensus        66 vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~------~~~~y~~~K~~~E~~l~~~~~  138 (212)
T d2a35a1          66 AFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK------SSIFYNRVKGELEQALQEQGW  138 (212)
T ss_dssp             EEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHTTSCC
T ss_pred             eeeeeeeeccccccccccccchhhhhhhccccccccc-ccccccccccccccc------cccchhHHHHHHhhhcccccc
Confidence            999998763             344688999999999 999885 77665432      256788999999999999888


Q ss_pred             C-EEEEeccCch
Q 044721          146 P-YTYGDVLNHG  156 (263)
Q Consensus       146 ~-~~~gr~~n~~  156 (263)
                      + |++.|...+.
T Consensus       139 ~~~~I~Rp~~v~  150 (212)
T d2a35a1         139 PQLTIARPSLLF  150 (212)
T ss_dssp             SEEEEEECCSEE
T ss_pred             ccceeeCCccee
Confidence            6 8888876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=1.4e-15  Score=120.35  Aligned_cols=143  Identities=20%  Similarity=0.247  Sum_probs=107.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC--EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP--TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +|++||||||||+||+++++.|+++|++  |+.+.|+     +++..   .+ ..+++++.+|+++.+++.++++++|.+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~-----~~~~~---~~-~~~~~~~~~d~~~~~~~~~~~~~~d~v   72 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKE---KI-GGEADVFIGDITDADSINPAFQGIDAL   72 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESC-----HHHHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCC-----HHHHH---hc-cCCcEEEEeeeccccccccccccceee
Confidence            5789999999999999999999999976  5556676     33332   12 457899999999999999999999999


Q ss_pred             EEcCCCcc----------------------------chhHHHHHHHHHHhCCcceeee-ccccCCC-CccccCCCCchHH
Q 044721           81 ISTVGHTL----------------------------LGDQVKIIAAIKEAGNIKRFFP-SEFGNDV-DRVHAVEPAKSAF  130 (263)
Q Consensus        81 v~~a~~~~----------------------------~~~~~~l~~~~~~~~~~~~~i~-S~~g~~~-~~~~~~~~~~~~~  130 (263)
                      ||+++...                            +..+.+++....... .+...+ |+.+... ...........|.
T Consensus        73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~  151 (252)
T d2q46a1          73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNIL  151 (252)
T ss_dssp             EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGGGGGGCCHH
T ss_pred             EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccccccccchh
Confidence            99998653                            234678888888887 777664 4444322 1122222345677


Q ss_pred             HHHHHHHHHHHHcCCCEEEEeccCc
Q 044721          131 ATKAKIRRAVEAEGIPYTYGDVLNH  155 (263)
Q Consensus       131 ~~k~~~e~~~~~~~~~~~~gr~~n~  155 (263)
                      ..+...+.+.+..++++++.|..++
T Consensus       152 ~~~~~~~~~~~~~~~~~~ilRp~~v  176 (252)
T d2q46a1         152 VWKRKAEQYLADSGTPYTIIRAGGL  176 (252)
T ss_dssp             HHHHHHHHHHHHSSSCEEEEEECEE
T ss_pred             hhhhhhhhhhhcccccceeecceEE
Confidence            7888888888999999999987654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.65  E-value=8.9e-16  Score=124.59  Aligned_cols=127  Identities=20%  Similarity=0.143  Sum_probs=99.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |||||||||||||++++++|.++|++|++++|+                       .+|+.|.++++++++  ++|+|||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~-----------------------~~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech-----------------------hccCCCHHHHHHHHHHcCCCEEEe
Confidence            679999999999999999999999999998887                       148999999999987  6799999


Q ss_pred             cCCCccch---------------hHHHHHHHHHHhCCcceeeeccc---cCC----CCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTLLG---------------DQVKIIAAIKEAGNIKRFFPSEF---GND----VDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~~~---------------~~~~l~~~~~~~~~~~~~i~S~~---g~~----~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +|+.....               ....+.+.+.... ...++.|+.   +..    ..+.++.++...|..+|...|+++
T Consensus        59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~  137 (281)
T d1vl0a_          59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  137 (281)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             eccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHH
Confidence            99887621               2245555666665 445554432   221    244556677888999999999999


Q ss_pred             HHcCCCEEEEeccCc
Q 044721          141 EAEGIPYTYGDVLNH  155 (263)
Q Consensus       141 ~~~~~~~~~gr~~n~  155 (263)
                      ++.+.++++.|..+.
T Consensus       138 ~~~~~~~~i~R~~~v  152 (281)
T d1vl0a_         138 KALNPKYYIVRTAWL  152 (281)
T ss_dssp             HHHCSSEEEEEECSE
T ss_pred             HHhCCCccccceeEE
Confidence            999999999987764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.64  E-value=6.3e-19  Score=147.24  Aligned_cols=35  Identities=14%  Similarity=0.042  Sum_probs=31.6

Q ss_pred             CCCeEEEEc--CCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIG--GTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtG--atG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|++||||  ++++||+++++.|+++|++|++.+++
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~   37 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence            368999999  66799999999999999999998876

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.62  E-value=8.7e-16  Score=125.47  Aligned_cols=126  Identities=21%  Similarity=0.210  Sum_probs=95.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv~   82 (263)
                      |+|||||||||||+++++.|.+.|+.| .++++...                   +.+|++|.+.++++++  ++|+|||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-------------------ccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            689999999999999999999998744 44554210                   2479999999999987  5699999


Q ss_pred             cCCCcc---------------chhHHHHHHHHHHhCCcceeeecc---ccCC----CCccccCCCCchHHHHHHHHHHHH
Q 044721           83 TVGHTL---------------LGDQVKIIAAIKEAGNIKRFFPSE---FGND----VDRVHAVEPAKSAFATKAKIRRAV  140 (263)
Q Consensus        83 ~a~~~~---------------~~~~~~l~~~~~~~~~~~~~i~S~---~g~~----~~~~~~~~~~~~~~~~k~~~e~~~  140 (263)
                      +||...               ...+.++++++.+.+ .+.+++|+   ++..    .+|..+..|.+.|+.+|...|.++
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_          61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             ecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhH
Confidence            998765               234578888888887 77666543   2211    245666778899999999999999


Q ss_pred             HHcCCCEEEEe
Q 044721          141 EAEGIPYTYGD  151 (263)
Q Consensus       141 ~~~~~~~~~gr  151 (263)
                      +.....+...+
T Consensus       140 ~~~~~~~~~~~  150 (298)
T d1n2sa_         140 QDNCPKHLIFR  150 (298)
T ss_dssp             HHHCSSEEEEE
T ss_pred             Hhhhccccccc
Confidence            87766665444

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.61  E-value=1.7e-15  Score=121.90  Aligned_cols=132  Identities=16%  Similarity=0.222  Sum_probs=91.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhhc--cCCcEEEEccCCCHHHHHHHhc-----
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFK--KLGVNLVIGDVLNHESLVKAIK-----   75 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-----   75 (263)
                      +.++|||||+|+||+++++.|+++|++ |++++|+.... ....+.++++.  +.++.++.+|++|+++++++++     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCH-HHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            468999999999999999999999985 88888874322 11122222222  3568889999999999998876     


Q ss_pred             -CcCEEEEcCCCcc-------------------chhHHHHHHHHHHhCCcceee-eccccCCCCccccCCCCchHHHHHH
Q 044721           76 -QVDVVISTVGHTL-------------------LGDQVKIIAAIKEAGNIKRFF-PSEFGNDVDRVHAVEPAKSAFATKA  134 (263)
Q Consensus        76 -~~d~vv~~a~~~~-------------------~~~~~~l~~~~~~~~~~~~~i-~S~~g~~~~~~~~~~~~~~~~~~k~  134 (263)
                       ++|.||||+|...                   +....++.+.+...+ ..+++ +||.......    .....|..+|.
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~----~~~~~YaAaka  162 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA----PGLGGYAPGNA  162 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC----TTCTTTHHHHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCC----cccHHHHHHHH
Confidence             4799999999875                   122345666665555 66776 4553221111    11456889999


Q ss_pred             HHHHHHH
Q 044721          135 KIRRAVE  141 (263)
Q Consensus       135 ~~e~~~~  141 (263)
                      .++.+.+
T Consensus       163 ~l~~la~  169 (259)
T d2fr1a1         163 YLDGLAQ  169 (259)
T ss_dssp             HHHHHHH
T ss_pred             hHHHHHH
Confidence            8887764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.60  E-value=2.4e-16  Score=129.45  Aligned_cols=36  Identities=14%  Similarity=0.079  Sum_probs=33.4

Q ss_pred             CCCCeEEEEcCCC--hhHHHHHHHHHHCCCCEEEEEcC
Q 044721            2 ASKSKILFIGGTG--YIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         2 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +++|++|||||+|  +||++++++|+++|++|++.+|+
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~   43 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            4689999999876  99999999999999999999986

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.45  E-value=7.3e-14  Score=107.05  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=67.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-cCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-KLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +++|+++||||+|+||+.+++.|+++|++|++++|+     .++.+.+ +.+. ..++....+|++|.+++++++.++|+
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDi   95 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHF   95 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccc-----hHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCe
Confidence            468999999999999999999999999999999999     4444322 2221 23566788999999999999999999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      ||||||..
T Consensus        96 lin~Ag~g  103 (191)
T d1luaa1          96 VFTAGAIG  103 (191)
T ss_dssp             EEECCCTT
T ss_pred             eeecCccc
Confidence            99999864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=5.4e-13  Score=108.88  Aligned_cols=138  Identities=18%  Similarity=0.196  Sum_probs=91.8

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHH-HHH-----hcCcCE
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESL-VKA-----IKQVDV   79 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~-----~~~~d~   79 (263)
                      |||||||||||+++++.|+++|+ +|+++++-..   ..+.....   ...    ..|..+...+ ...     +..++.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~---~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD---GTKFVNLV---DLN----IADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS---GGGGHHHH---TSC----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCC---cchhhccc---ccc----hhhhccchHHHHHHhhhhcccchhh
Confidence            89999999999999999999996 6888764321   11111111   111    1233332222 222     246899


Q ss_pred             EEEcCCCcc-------------chhHHHHHHHHHHhCCcceeeeccccC---C----CCccccCCCCchHHHHHHHHHHH
Q 044721           80 VISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFFPSEFGN---D----VDRVHAVEPAKSAFATKAKIRRA  139 (263)
Q Consensus        80 vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i~S~~g~---~----~~~~~~~~~~~~~~~~k~~~e~~  139 (263)
                      ++|.|+...             +..+.++++++...+ ++.++.|+...   .    ..+..+..|.+.|+.+|...|.+
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~  150 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY  150 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             hhhhccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccchhhhh
Confidence            999997654             345678888999998 98887643221   1    12234456788999999999998


Q ss_pred             HH----HcCCCEEEEeccCc
Q 044721          140 VE----AEGIPYTYGDVLNH  155 (263)
Q Consensus       140 ~~----~~~~~~~~gr~~n~  155 (263)
                      ++    +.+++++..|..+.
T Consensus       151 ~~~~~~~~~~~~~~~r~~~v  170 (307)
T d1eq2a_         151 VRQILPEANSQIVGFRYFNV  170 (307)
T ss_dssp             HHHHGGGCSSCEEEEEECEE
T ss_pred             ccccccccccccccccceeE
Confidence            86    46899998887764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.76  E-value=6.3e-08  Score=68.71  Aligned_cols=95  Identities=18%  Similarity=0.262  Sum_probs=73.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++++     +++.+.+..  ..+..++.+|.+|++.++++ ++.+|.++.+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d-----~~~~~~~~~--~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCC-----hhhhhhhhh--hhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            68999997 999999999999999999999999     655554332  12678999999999999987 6789999987


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceeee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .....  ....+...++..+ +++++.
T Consensus        73 t~~d~--~N~~~~~~~k~~~-~~~iI~   96 (132)
T d1lssa_          73 TGKEE--VNLMSSLLAKSYG-INKTIA   96 (132)
T ss_dssp             CSCHH--HHHHHHHHHHHTT-CCCEEE
T ss_pred             CCcHH--HHHHHHHHHHHcC-CceEEE
Confidence            66532  2223344556777 777663

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.49  E-value=8.8e-07  Score=62.62  Aligned_cols=95  Identities=20%  Similarity=0.312  Sum_probs=69.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      |+++|.|. |.+|+++++.|.+.|++|++++.+     +++.+.+.   .....++.+|.++++.++++ +.++|.+|-+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d-----~~~~~~~~---~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKVNAYA---SYATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHHHHTT---TTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCc-----HHHHHHHH---HhCCcceeeecccchhhhccCCccccEEEEE
Confidence            56888885 999999999999999999999998     55554332   34567889999999999887 7889998887


Q ss_pred             CCCccchhHHHHHHHHHHhCCcceeee
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .+... .....+....+..+ ..+++.
T Consensus        72 ~~~~~-~~~~~~~~~~~~~~-~~~iia   96 (134)
T d2hmva1          72 IGANI-QASTLTTLLLKELD-IPNIWV   96 (134)
T ss_dssp             CCSCH-HHHHHHHHHHHHTT-CSEEEE
T ss_pred             cCchH-HhHHHHHHHHHHcC-CCcEEe
Confidence            76542 11122223344555 566653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.46  E-value=1.2e-06  Score=64.75  Aligned_cols=90  Identities=18%  Similarity=0.220  Sum_probs=66.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      .|+|+|.|| |++|+.+++.|.+.|++|++++|+     .++.+.+..- .........+..+.......+...|.++.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~-----~~~a~~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVISL   74 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHTT-CTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----hHHHHHHHhc-ccccccccccccchhhhHhhhhccceeEee
Confidence            589999996 999999999999999999999999     6565543332 233455556777778888888899998877


Q ss_pred             CCCccchhHHHHHHHHHHhC
Q 044721           84 VGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ....   ........+.+.+
T Consensus        75 ~~~~---~~~~~~~~~~~~~   91 (182)
T d1e5qa1          75 IPYT---FHATVIKSAIRQK   91 (182)
T ss_dssp             SCGG---GHHHHHHHHHHHT
T ss_pred             ccch---hhhHHHHHHHhhc
Confidence            6543   3344555666655

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.22  E-value=8.4e-06  Score=58.13  Aligned_cols=96  Identities=17%  Similarity=0.133  Sum_probs=64.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCC-cEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLG-VNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ||.|+||+|.+|++++..|+.+|.  ++++++.+     +.+.+.+ ++.... ..... ......+..+.++++|+||.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~-----~~~~~a~-Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVi   74 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA-----HTPGVAA-DLSHIETRATVK-GYLGPEQLPDCLKGCDVVVI   74 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS-----SHHHHHH-HHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecc-----ccchhhH-HHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEE
Confidence            799999999999999999998884  58888876     3333322 221111 11111 12235566778899999999


Q ss_pred             cCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|...             ....+.+++.+.+++ .+-++
T Consensus        75 tag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~-p~~ii  113 (144)
T d1mlda1          75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMI  113 (144)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred             CCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCeEE
Confidence            999754             223467788888887 66554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.15  E-value=1.1e-05  Score=57.67  Aligned_cols=95  Identities=18%  Similarity=0.315  Sum_probs=63.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhh--h--hhh--hccCCcEEEEccCCCHHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQ--L--LDH--FKKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~--~~~--~~~~~~~~~~~D~~~~~~~~~   72 (263)
                      |.+.|||.|.|+ |++|+.++..|+.+|  .+++++++++     ++.+  .  +.+  ..........+|+       +
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~-----~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~   68 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK-----DRTKGDALDLEDAQAFTAPKKIYSGEY-------S   68 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH-----HHHHHHHHHHHGGGGGSCCCEEEECCG-------G
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeeccc-----chhHHHHHHHhccccccCCceEeeccH-------H
Confidence            567789999995 999999999999988  5799999883     3322  1  111  1122344455554       2


Q ss_pred             HhcCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           73 AIKQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .++++|++|.++|....             ...+.+.+.+.+.+ .+-++
T Consensus        69 ~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aiv  117 (146)
T d1ez4a1          69 DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIF  117 (146)
T ss_dssp             GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEE
T ss_pred             HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEE
Confidence            46789999999987651             12356677777776 55554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.14  E-value=9.1e-07  Score=66.44  Aligned_cols=33  Identities=30%  Similarity=0.480  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |||.|+||+|.+|+++++.|++.||+|++.+|+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            689999999999999999999999999999999

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.07  E-value=6.6e-06  Score=61.19  Aligned_cols=78  Identities=15%  Similarity=0.183  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      ++.+++|+||+|.+|+..++.....|++|++++++     +++.+.+..+ +....+..-|-...+.+.+...  ++|++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~-----~~~~~~~~~~-Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQI-GFDAAFNYKTVNSLEEALKKASPDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT-TCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCC-----HHHHHHHHhh-hhhhhcccccccHHHHHHHHhhcCCCcee
Confidence            46799999999999999999999999999999988     5565544444 1111122223223344444333  79999


Q ss_pred             EEcCCC
Q 044721           81 ISTVGH   86 (263)
Q Consensus        81 v~~a~~   86 (263)
                      +++.|.
T Consensus       103 ~D~vG~  108 (182)
T d1v3va2         103 FDNVGG  108 (182)
T ss_dssp             EESSCH
T ss_pred             EEecCc
Confidence            999984

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.02  E-value=7.3e-06  Score=60.33  Aligned_cols=75  Identities=20%  Similarity=0.257  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+++++|+||+|.+|...++.+...|++|++++++     +++.+.+.++   ++..+ .|..+...-.....++|++|.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~-----~~~~~~~~~l---Ga~~~-i~~~~~~~~~~~~~g~D~v~d   97 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLAL---GAEEA-ATYAEVPERAKAWGGLDLVLE   97 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHHT---TCSEE-EEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccc-----cccccccccc---cccee-eehhhhhhhhhcccccccccc
Confidence            46789999999999999999999999999999988     5555544444   22222 255554333334568999999


Q ss_pred             cCCC
Q 044721           83 TVGH   86 (263)
Q Consensus        83 ~a~~   86 (263)
                      +.|.
T Consensus        98 ~~G~  101 (171)
T d1iz0a2          98 VRGK  101 (171)
T ss_dssp             CSCT
T ss_pred             ccch
Confidence            8873

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=3.7e-05  Score=54.71  Aligned_cols=91  Identities=18%  Similarity=0.337  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC----CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ||+|.|.||||++|+.+++.|+++.    .+++...++....  ...   . ......  ...+..+.+    .++++|+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g--~~~---~-~~~~~~--~~~~~~~~~----~~~~~Di   68 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAP---S-FGGTTG--TLQDAFDLE----ALKALDI   68 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCC---G-GGTCCC--BCEETTCHH----HHHTCSE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccc--ccc---c-ccCCce--eeecccchh----hhhcCcE
Confidence            5689999999999999999888753    2466555543211  011   0 001111  122333433    3568999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      +|.+++.   +....+.+.+.+.| .+.+++
T Consensus        69 vF~a~~~---~~s~~~~~~~~~~g-~~~~VI   95 (146)
T d1t4ba1          69 IVTCQGG---DYTNEIYPKLRESG-WQGYWI   95 (146)
T ss_dssp             EEECSCH---HHHHHHHHHHHHTT-CCCEEE
T ss_pred             EEEecCc---hHHHHhhHHHHhcC-CCeecc
Confidence            9999974   34567788888888 765554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=3.8e-05  Score=50.26  Aligned_cols=88  Identities=23%  Similarity=0.295  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      .++|+|+|.|. |..|.++++.|.+.|++|++.+.+....   ..   +.+ ......+.+.. +..    .+.++|.+|
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~---~~---~~~-~~~~~~~~~~~-~~~----~~~~~d~vi   69 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP---GL---DKL-PEAVERHTGSL-NDE----WLMAADLIV   69 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT---TG---GGS-CTTSCEEESBC-CHH----HHHHCSEEE
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch---hH---HHH-hhccceeeccc-chh----hhccCCEEE
Confidence            35789999996 9999999999999999999999865321   11   111 23344554443 222    345789999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcc
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      ..-|...   ...++..+.+.+ ++
T Consensus        70 ~SPGi~~---~~~~~~~a~~~g-i~   90 (93)
T d2jfga1          70 ASPGIAL---AHPSLSAAADAG-IE   90 (93)
T ss_dssp             ECTTSCT---TSHHHHHHHHTT-CE
T ss_pred             ECCCCCC---CCHHHHHHHHcC-CC
Confidence            9988763   345777788877 65

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=7.6e-06  Score=60.35  Aligned_cols=75  Identities=12%  Similarity=0.176  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHH---HHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLV---KAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~--~~   77 (263)
                      ++.+|||+||+|.+|...++.+...|++|++++++     +++.+.+..+   ++.. ..|..+++..+   +...  ++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~-----~~~~~~~~~~---Ga~~-vi~~~~~~~~~~i~~~t~~~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQN---GAHE-VFNHREVNYIDKIKKYVGEKGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccc-----cccccccccc---Cccc-ccccccccHHHHhhhhhccCCc
Confidence            46789999999999999999999999999999987     5565554444   2222 23666644333   3332  68


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |+++.+.|.
T Consensus        99 d~v~d~~g~  107 (174)
T d1yb5a2          99 DIIIEMLAN  107 (174)
T ss_dssp             EEEEESCHH
T ss_pred             eEEeecccH
Confidence            999999874

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=4.6e-05  Score=54.73  Aligned_cols=90  Identities=14%  Similarity=0.229  Sum_probs=66.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchh-hhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~   82 (263)
                      -+++|.|. |.+|+.+++.|.+.|++|+++..+     +++. +........++.++.+|.+|++.++++ ++.+|.+|-
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d-----~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNL-----PEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECC-----CHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEecc-----chhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEE
Confidence            36888985 999999999999999999999988     4332 233444456899999999999998774 678999999


Q ss_pred             cCCCccchhHHHHHHHHHHh
Q 044721           83 TVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~  102 (263)
                      +.+...  ....++..+++.
T Consensus        78 ~~~~d~--~n~~~~~~~r~~   95 (153)
T d1id1a_          78 LSDNDA--DNAFVVLSAKDM   95 (153)
T ss_dssp             CSSCHH--HHHHHHHHHHHH
T ss_pred             ccccHH--HHHHHHHHHHHh
Confidence            876532  223334445554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.90  E-value=1.5e-05  Score=57.88  Aligned_cols=83  Identities=22%  Similarity=0.321  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|.|+ |.+|+.+++.|.+.|+ +++++.|+     .++.+.+ ..+   +..+     .+.+++.+.+.++|+|
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt-----~~ka~~l~~~~---~~~~-----~~~~~~~~~l~~~Div   88 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELARDL---GGEA-----VRFDELVDHLARSDVV   88 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHHHH---TCEE-----CCGGGHHHHHHTCSEE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCc-----HHHHHHHHHhh---hccc-----ccchhHHHHhccCCEE
Confidence            5789999997 9999999999999997 58888888     5454422 222   2222     2345677788899999


Q ss_pred             EEcCCCccchhHHHHHHHH
Q 044721           81 ISTVGHTLLGDQVKIIAAI   99 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~   99 (263)
                      |++.+....-.....++..
T Consensus        89 i~atss~~~ii~~~~i~~~  107 (159)
T d1gpja2          89 VSATAAPHPVIHVDDVREA  107 (159)
T ss_dssp             EECCSSSSCCBCHHHHHHH
T ss_pred             EEecCCCCccccHhhhHHH
Confidence            9999876533334444433

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=9.3e-06  Score=51.10  Aligned_cols=43  Identities=21%  Similarity=0.294  Sum_probs=36.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhh
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH   51 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~   51 (263)
                      +++++|+||+|++|...++.+...|++|++++++     +++.+.+..
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s-----~~k~~~~~~   74 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKS   74 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECC-----HHHHHHHHH
Confidence            5689999999999999999988999999999998     556554443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=2.5e-05  Score=57.95  Aligned_cols=82  Identities=11%  Similarity=0.217  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhh-hhhhhc-cCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFK-KLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      ++++++|.|+ |+.|++++..|.+.|. +++++.|+.+..  ++.. ..+.+. .........|+.+.+.+.+.+..+|+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFF--DKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTH--HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHH--HHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            4689999995 9999999999999996 688889985432  1111 122221 22345667899999999999999999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      |||+.+..
T Consensus        94 iIN~Tp~G  101 (182)
T d1vi2a1          94 LTNGTKVG  101 (182)
T ss_dssp             EEECSSTT
T ss_pred             eccccCCc
Confidence            99998754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=3.7e-05  Score=54.69  Aligned_cols=98  Identities=15%  Similarity=0.122  Sum_probs=58.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CC--CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVK-AG--HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |||.|+|++|.+|++++..|.. .+  .++++.+..+. . .....-+.+............-.+    .+.+++.|++|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~-~g~a~Dl~h~~~~~~~~~~~~~~~----~~~~~~aDvvv   74 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-T-PGVAVDLSHIPTAVKIKGFSGEDA----TPALEGADVVL   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-H-HHHHHHHHTSCSSCEEEEECSSCC----HHHHTTCSEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-c-hhHHHHHHCCccccCCcEEEcCCC----ccccCCCCEEE
Confidence            6899999999999999998864 34  57888886521 1 111111112111111111112222    24678999999


Q ss_pred             EcCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .++|...             ....+.+.+.+.+.. .+.++
T Consensus        75 itaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~-p~aiv  114 (145)
T d2cmda1          75 ISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACI  114 (145)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred             ECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC-CCcEE
Confidence            9999764             122456677777776 55544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.89  E-value=6.8e-05  Score=53.52  Aligned_cols=92  Identities=22%  Similarity=0.405  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh-h---hhh---hccCCcEEEEccCCCHHHHHHHh
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ-L---LDH---FKKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~---~~~---~~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      ++||.|+|+ |++|+.++..|+..|.  ++++++++     +++.+ .   +.+   +......+...|+       +.+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~-----~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l   72 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDAN-----ESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDC   72 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGT
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeec-----cccccchhccHhhCccccCCCeEEEECCH-------HHh
Confidence            568999996 9999999999999884  69999988     33322 1   111   1122344444443       357


Q ss_pred             cCcCEEEEcCCCcc-------------chhHHHHHHHHHHhCCcceee
Q 044721           75 KQVDVVISTVGHTL-------------LGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        75 ~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++|++|.++|...             ....+.+++.+.+.. .+.++
T Consensus        73 ~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~~  119 (148)
T d1ldna1          73 RDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLF  119 (148)
T ss_dssp             TTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEE
T ss_pred             ccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhC-CCceE
Confidence            78999999999765             122356667777776 55443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=1.5e-05  Score=58.90  Aligned_cols=76  Identities=18%  Similarity=0.181  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHhc--Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAIK--QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~   77 (263)
                      .+.+|+|+||+|.+|...++.+...|++|++++++     +++.+.+..+.   +.. ..|..+++   .+.++-.  ++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s-----~~k~~~~~~lG---a~~-vi~~~~~d~~~~v~~~t~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKAG---AWQ-VINYREEDLVERLKEITGGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHHT---CSE-EEETTTSCHHHHHHHHTTTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccc-----hHHHHHHHhcC---CeE-EEECCCCCHHHHHHHHhCCCCe
Confidence            46799999999999999999999999999999999     66666555552   222 23666543   3334333  68


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |+++.+.+..
T Consensus        99 d~v~d~~g~~  108 (179)
T d1qora2          99 RVVYDSVGRD  108 (179)
T ss_dssp             EEEEECSCGG
T ss_pred             EEEEeCccHH
Confidence            9999999854

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=5.2e-06  Score=60.05  Aligned_cols=83  Identities=11%  Similarity=0.041  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCC----C-EEEEEcCCCCCCcchhhhh-hhhc---cCCcEEEEccCCCHHHHH
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGH----P-TFVLVRESTLSAPSKSQLL-DHFK---KLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~----~-V~~~~r~~~~~~~~~~~~~-~~~~---~~~~~~~~~D~~~~~~~~   71 (263)
                      |.+++||.|+||+|++|++++..|+..+.    . +..-.-..... .++.+.. ..+.   ......+...    ....
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   75 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA-MKALEGVVMELEDCAFPLLAGLEAT----DDPK   75 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHTTTCTTEEEEEEE----SCHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccc-hhhHcCchhhhhccccccccccccC----Cchh
Confidence            56678999999999999999999998752    1 21111111000 2222211 1111   1122222222    2234


Q ss_pred             HHhcCcCEEEEcCCCcc
Q 044721           72 KAIKQVDVVISTVGHTL   88 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~~   88 (263)
                      +.++++|++|.++|...
T Consensus        76 ~~~~~advViitaG~~~   92 (154)
T d1y7ta1          76 VAFKDADYALLVGAAPR   92 (154)
T ss_dssp             HHTTTCSEEEECCCCCC
T ss_pred             hhcccccEEEeecCcCC
Confidence            67889999999999875

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.84  E-value=0.00013  Score=51.76  Aligned_cols=97  Identities=23%  Similarity=0.227  Sum_probs=60.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhh----hhhhh---ccCCcEEEEccCCCHHHHHHHhc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQ----LLDHF---KKLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      |||.|+||+|.+|+.++..|+.+|  .++.++++++..   .+.+    -+.+.   ...++.....--.|.    +.++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~---~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~   73 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSI---NKLEGLREDIYDALAGTRSDANIYVESDENL----RIID   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGH---HHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhh---HhhhcccccchhcccccccCCccccCCcchH----HHhc
Confidence            689999999999999999999998  479998987321   1111    11111   112233322211122    3677


Q ss_pred             CcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           76 QVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        76 ~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|++|.+||....             ...+.+++.+.+.. .+.++
T Consensus        74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~ii  119 (145)
T d1hyea1          74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF  119 (145)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_pred             cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEE
Confidence            89999999997651             12356667777776 55544

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.81  E-value=2.2e-05  Score=58.13  Aligned_cols=75  Identities=23%  Similarity=0.391  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHh--cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAI--KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~--~~~   77 (263)
                      ++.++||+||+|.+|...++.+...|++|++++++     +++.+.+..+   ++..+ .|..++   +.+.+..  +++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~-----~~~~~~l~~~---Ga~~v-i~~~~~~~~~~v~~~t~~~g~   95 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLSRL---GVEYV-GDSRSVDFADEILELTDGYGV   95 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHTT---CCSEE-EETTCSTHHHHHHHHTTTCCE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecc-----cccccccccc---ccccc-ccCCccCHHHHHHHHhCCCCE
Confidence            35789999999999999999999999999999988     5555544443   33322 355553   3444444  369


Q ss_pred             CEEEEcCCC
Q 044721           78 DVVISTVGH   86 (263)
Q Consensus        78 d~vv~~a~~   86 (263)
                      |+++.+.|.
T Consensus        96 d~v~d~~g~  104 (183)
T d1pqwa_          96 DVVLNSLAG  104 (183)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEecccc
Confidence            999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.80  E-value=1.5e-05  Score=58.83  Aligned_cols=76  Identities=16%  Similarity=0.224  Sum_probs=51.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-HHHHHHh--cCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-ESLVKAI--KQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~--~~~d~v   80 (263)
                      +.++||+||+|++|+..++.....|++|++++++     +++.+.+..+.   ...+ .|..+. +...+..  +++|++
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s-----~~k~~~~~~lG---a~~v-i~~~~~~~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK-----AAEHDYLRVLG---AKEV-LAREDVMAERIRPLDKQRWAAA  102 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----TTCHHHHHHTT---CSEE-EECC---------CCSCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCc-----hHHHHHHHhcc---ccee-eecchhHHHHHHHhhccCcCEE
Confidence            5689999999999999999999999999999998     55555544442   2221 133322 1222222  279999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      +.+.|...
T Consensus       103 id~vgg~~  110 (176)
T d1xa0a2         103 VDPVGGRT  110 (176)
T ss_dssp             EECSTTTT
T ss_pred             EEcCCchh
Confidence            99998664

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.77  E-value=4.5e-05  Score=55.70  Aligned_cols=77  Identities=23%  Similarity=0.318  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccC--CCHHHHHHHh-----c
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV--LNHESLVKAI-----K   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~-----~   75 (263)
                      .+.+++|+| +|.+|...++.+...|++|++++++     +++.+.+..+. ... .+..|-  .+...+.+.+     .
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~-----~~r~~~a~~~g-a~~-~~~~~~~~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARS-----PRRLEVAKNCG-ADV-TLVVDPAKEEESSIIERIRSAIGD   97 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-CSE-EEECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchH-----HHHHHHHHHcC-CcE-EEeccccccccchhhhhhhccccc
Confidence            357899998 6999999999999999999999999     77776655552 222 222222  2344443333     3


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|.++|..
T Consensus        98 g~D~vid~~g~~  109 (170)
T d1e3ja2          98 LPNVTIDCSGNE  109 (170)
T ss_dssp             CCSEEEECSCCH
T ss_pred             CCceeeecCCCh
Confidence            699999999864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.76  E-value=5.2e-06  Score=62.20  Aligned_cols=80  Identities=15%  Similarity=0.226  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-----cCCcEEEEccCCCHHHHHHHhc
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----KLGVNLVIGDVLNHESLVKAIK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~   75 (263)
                      ||.|++|.|.|+ |.-|++++..|++.|++|++.+|+     ++..+.+....     -+++.. .-++.-..+++++++
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~-----~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~   76 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYN   76 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHT
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEec-----HHHHHHHhhccccccccccccc-ccccccchhhhhccC
Confidence            677889999995 999999999999999999999998     44433222111     011111 112222245678899


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|.||.+.+..
T Consensus        77 ~ad~iiiavPs~   88 (189)
T d1n1ea2          77 GAEIILFVIPTQ   88 (189)
T ss_dssp             TCSCEEECSCHH
T ss_pred             CCCEEEEcCcHH
Confidence            999999987644

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=4.3e-05  Score=55.44  Aligned_cols=85  Identities=14%  Similarity=0.130  Sum_probs=53.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |||+|.|+ |.+|+.++..|++.|++|++++|++...     +...... ............+.    +.+..+|++|.+
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~   70 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY-----CSVNLVETDGSIFNESLTANDP----DFLATSDLLLVT   70 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE-----EEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEEC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh-----hhhccccCCccccccccccchh----hhhcccceEEEe
Confidence            79999997 9999999999999999999999985432     1111110 11111111111233    334579999999


Q ss_pred             CCCccchhHHHHHHHHHHh
Q 044721           84 VGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~  102 (263)
                      .....   +...++.+...
T Consensus        71 vka~~---~~~~~~~l~~~   86 (167)
T d1ks9a2          71 LKAWQ---VSDAVKSLAST   86 (167)
T ss_dssp             SCGGG---HHHHHHHHHTT
T ss_pred             ecccc---hHHHHHhhccc
Confidence            87654   33445554443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.75  E-value=0.00014  Score=51.54  Aligned_cols=90  Identities=20%  Similarity=0.360  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-C---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-H---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |||.|.||||++|+.+++.|++.. |   ++..++.+...  ....    .+.....  ...+..+.    ..++++|++
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~--gk~~----~~~~~~~--~~~~~~~~----~~~~~~Dvv   68 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAP----NFGKDAG--MLHDAFDI----ESLKQLDAV   68 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS--SBCC----CSSSCCC--BCEETTCH----HHHTTCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccc--cccc----ccCCcce--eeecccch----hhhccccEE
Confidence            689999999999999999888743 3   45544433211  1110    1101111  11122333    346789999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      |.+.+..   ....+.+.+.+.+ .+.+++
T Consensus        69 F~alp~~---~s~~~~~~l~~~g-~~~~VI   94 (147)
T d1mb4a1          69 ITCQGGS---YTEKVYPALRQAG-WKGYWI   94 (147)
T ss_dssp             EECSCHH---HHHHHHHHHHHTT-CCSEEE
T ss_pred             EEecCch---HHHHHhHHHHHcC-CceEEE
Confidence            9998753   4667888888888 775443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.74  E-value=3.9e-05  Score=56.66  Aligned_cols=90  Identities=16%  Similarity=0.122  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-----cCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----KLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      .|+|.|.|+ |.+|..++..|++.|++|.+++|+     +++.+.+....     .+.............++.+.++++|
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD   74 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCC
Confidence            379999996 999999999999999999999998     44443322211     1111111111111234567888999


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHh
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      ++|.+.....   ...+++.+...
T Consensus        75 ~iii~v~~~~---~~~~~~~i~~~   95 (184)
T d1bg6a2          75 VILIVVPAIH---HASIAANIASY   95 (184)
T ss_dssp             EEEECSCGGG---HHHHHHHHGGG
T ss_pred             EEEEEEchhH---HHHHHHHhhhc
Confidence            9999876543   44556655544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.71  E-value=5.2e-05  Score=54.36  Aligned_cols=36  Identities=31%  Similarity=0.509  Sum_probs=33.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .+++|.|.||.|.+|+.+++.|.+.||+|.+.+|+.
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            467999999999999999999999999999999883

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=0.00011  Score=56.25  Aligned_cols=74  Identities=18%  Similarity=0.220  Sum_probs=53.2

Q ss_pred             CCCCeEEEEcC----------------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC
Q 044721            2 ASKSKILFIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL   65 (263)
Q Consensus         2 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   65 (263)
                      +.+++||||+|                ||..|.+|++++..+|++|+++.-......           ...+..+.  +.
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~-----------p~~~~~~~--~~   70 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-----------PPFVKRVD--VM   70 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-----------CTTEEEEE--CC
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc-----------ccccccce--eh
Confidence            46789999975                799999999999999999999876543210           22344443  33


Q ss_pred             CHHH----HHHHhcCcCEEEEcCCCcc
Q 044721           66 NHES----LVKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        66 ~~~~----~~~~~~~~d~vv~~a~~~~   88 (263)
                      ..++    +.+.+...|++|++|+...
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhh
Confidence            4433    3445568999999999875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.68  E-value=9.9e-06  Score=59.33  Aligned_cols=73  Identities=19%  Similarity=0.218  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh-----cCcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI-----KQVD   78 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~d   78 (263)
                      +..|||+||+|++|...++.....|++|+.++++     ++|.+.+..+.   +..+ .|..  +...+..     +++|
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s-----~~k~~~~~~lG---ad~v-i~~~--~~~~~~~~~~~~~gvd   92 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN-----REAADYLKQLG---ASEV-ISRE--DVYDGTLKALSKQQWQ   92 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS-----SSTHHHHHHHT---CSEE-EEHH--HHCSSCCCSSCCCCEE
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecC-----HHHHHHHHhhc---ccce-Eecc--chhchhhhcccCCCce
Confidence            3479999999999999999988899999999998     55666555552   2222 1221  1111111     2689


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      +++.+.|..
T Consensus        93 ~vid~vgg~  101 (167)
T d1tt7a2          93 GAVDPVGGK  101 (167)
T ss_dssp             EEEESCCTH
T ss_pred             EEEecCcHH
Confidence            999998864

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=9.1e-05  Score=53.99  Aligned_cols=75  Identities=15%  Similarity=0.256  Sum_probs=57.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .+.+|+|.|+ |.+|...++.+...|+++++++++     +++.+.+..+.   ... ..|..+++......+++|++|.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~-----~~~~~~a~~lG---ad~-~i~~~~~~~~~~~~~~~D~vid   99 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTS-----EAKREAAKALG---ADE-VVNSRNADEMAAHLKSFDFILN   99 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHT---CSE-EEETTCHHHHHTTTTCEEEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccc-----hhHHHHHhccC---CcE-EEECchhhHHHHhcCCCceeee
Confidence            4678999986 999999999999999999998888     55555445442   222 2477777777777789999999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.|..
T Consensus       100 ~~g~~  104 (168)
T d1uufa2         100 TVAAP  104 (168)
T ss_dssp             CCSSC
T ss_pred             eeecc
Confidence            99865

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=0.00015  Score=48.99  Aligned_cols=85  Identities=12%  Similarity=0.324  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vv   81 (263)
                      ..+|.|.|| |++|+-++....+.|+++++++.++...  . .       .-.-..+.+|+.|.+.+.++..  ++|+|-
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~P--A-~-------~va~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAP--A-M-------HVAHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCG--G-G-------GGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCc--h-h-------hcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            468999995 9999999999999999999999875421  1 0       0113567899999999988774  679985


Q ss_pred             EcCCCccchhHHHHHHHHHHhC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      .-.=...    ...++.+.+.+
T Consensus        80 ~E~EnI~----~~~L~~le~~g   97 (111)
T d1kjqa2          80 PEIEAIA----TDMLIQLEEEG   97 (111)
T ss_dssp             ECSSCSC----HHHHHHHHHTT
T ss_pred             EEecCcC----HHHHHHHHHCC
Confidence            5433222    23455555554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=5.1e-05  Score=55.57  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|+|+|.|+ |+.+++++..|.+.|.+|+++.|+     .++.+.+.............++.+.     ....+|++||
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt-----~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN   85 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIIN   85 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccch-----HHHHHHHHHHHhhcccccccccccc-----cccccceeec
Confidence            5789999995 999999999999999999999998     5554433222111112222233221     1246899999


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus        86 ~Tp~G   90 (170)
T d1nyta1          86 ATSSG   90 (170)
T ss_dssp             CCSCG
T ss_pred             ccccC
Confidence            98655

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.63  E-value=0.00026  Score=51.19  Aligned_cols=33  Identities=30%  Similarity=0.327  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |++|.+.| .|.+|+.+++.|++.||+|.+.+|+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~   33 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV   33 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECc
Confidence            46899998 6999999999999999999999998

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.62  E-value=7.2e-05  Score=54.57  Aligned_cols=75  Identities=20%  Similarity=0.211  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC-CHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL-NHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vv   81 (263)
                      .+.+++|.|+ |.+|...++.+...|++|++++++     +++.+....+.   +..+. |.. +.+..+...+++|.++
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~-----~~k~~~a~~lG---a~~~i-~~~~~~~~~~~~~~~~d~vi   96 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRS-----SRKREDAMKMG---ADHYI-ATLEEGDWGEKYFDTFDLIV   96 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHHT---CSEEE-EGGGTSCHHHHSCSCEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccc-----hhHHHHhhccC---CcEEe-eccchHHHHHhhhcccceEE
Confidence            4678999996 999999999888899999999998     55666555552   22221 332 2333455566899999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.+..
T Consensus        97 ~~~~~~  102 (168)
T d1piwa2          97 VCASSL  102 (168)
T ss_dssp             ECCSCS
T ss_pred             EEecCC
Confidence            987754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.61  E-value=0.00012  Score=52.47  Aligned_cols=95  Identities=21%  Similarity=0.155  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhhh------ccCCcEEEEccCCCHHHHHHHh
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHF------KKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~------~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      +.+||.|.|+ |.+|+.++..|+..+ .++++++.++.     +.+ ...++      ........ .    ..+.++++
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~-----~~~g~a~Dl~~~~~~~~~~~~~~-~----~~~~~~~~   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKG-----MPEGKALDLSHVTSVVDTNVSVR-A----EYSYEAAL   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS-----HHHHHHHHHHHHHHHTTCCCCEE-E----ECSHHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccc-----cchhHHHHHhhhccccCCeeEEe-c----cCchhhhh
Confidence            4679999997 999999999988888 47888888743     222 11111      11111111 1    12224577


Q ss_pred             cCcCEEEEcCCCccc------------------hhHHHHHHHHHHhCCcceee
Q 044721           75 KQVDVVISTVGHTLL------------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~------------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++|+++.++|....                  ...+.+++.+.+.+ .+-++
T Consensus        75 ~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aiv  126 (154)
T d1pzga1          75 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFI  126 (154)
T ss_dssp             TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred             cCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEE
Confidence            899999999986531                  12356677777777 55554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.58  E-value=4.9e-05  Score=55.87  Aligned_cols=92  Identities=11%  Similarity=-0.012  Sum_probs=53.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC---C----CEEEEEcCCCCCCcchhhhh----hhhccCCcEEEEccCCCHHHHHHH
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG---H----PTFVLVRESTLSAPSKSQLL----DHFKKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g---~----~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      .+|.|+||+|+||++++..|++..   .    .+++++.+..   ..+.+-+    ++...+....+.  .  ..+..+.
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~---~~~l~g~~mdl~d~a~~~~~~~~--~--~~~~~~~   97 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS---FQALEGVAMELEDSLYPLLREVS--I--GIDPYEV   97 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEE--E--ESCHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc---cchhcchhhhhcccccccccCcc--c--cccchhh
Confidence            479999999999999999998753   2    2344443311   1222211    111111221111  1  1233578


Q ss_pred             hcCcCEEEEcCCCccc-------------hhHHHHHHHHHHhC
Q 044721           74 IKQVDVVISTVGHTLL-------------GDQVKIIAAIKEAG  103 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~  103 (263)
                      ++++|++|..+|...-             ...+.+.+++.+..
T Consensus        98 ~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1          98 FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            8999999999998751             12356666776653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.57  E-value=0.00012  Score=54.04  Aligned_cols=75  Identities=16%  Similarity=0.319  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC--HHH----HHHHhc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN--HES----LVKAIK   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~----~~~~~~   75 (263)
                      .+.+|+|+|+ |.+|...++.+...|+ +|++++++     +++.+.+.++. .. .++  |..+  ..+    +.+...
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~-----~~~~~~a~~lG-a~-~vi--~~~~~~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGS-----PNRLKLAEEIG-AD-LTL--NRRETSVEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESC-----HHHHHHHHHTT-CS-EEE--ETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccc-----ccccccccccc-ce-EEE--eccccchHHHHHHHHHhhC
Confidence            3578999996 9999999999999997 69999998     66776655552 11 222  3432  222    222222


Q ss_pred             --CcCEEEEcCCCc
Q 044721           76 --QVDVVISTVGHT   87 (263)
Q Consensus        76 --~~d~vv~~a~~~   87 (263)
                        ++|++|.+.|..
T Consensus        98 ~~g~Dvvid~vG~~  111 (182)
T d1vj0a2          98 GRGADFILEATGDS  111 (182)
T ss_dssp             TSCEEEEEECSSCT
T ss_pred             CCCceEEeecCCch
Confidence              699999999865

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.55  E-value=0.00065  Score=45.78  Aligned_cols=87  Identities=15%  Similarity=0.125  Sum_probs=61.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++++++|.|+ |.+|.+-++.|++.|++|++.+....   ++..   ......++.+...++.+.     .+.+++.++.
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~---~~~~---~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~   78 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI---PQFT---VWANEGMLTLVEGPFDET-----LLDSCWLAIA   78 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC---HHHH---HHHTTTSCEEEESSCCGG-----GGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC---hHHH---HHHhcCCceeeccCCCHH-----HhCCCcEEee
Confidence            5799999995 99999999999999999999886632   1111   111234677777666542     3667888887


Q ss_pred             cCCCccchhHHHHHHHHHHhC
Q 044721           83 TVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +.+..  .....+.+.+++.+
T Consensus        79 at~d~--~~n~~i~~~a~~~~   97 (113)
T d1pjqa1          79 ATDDD--TVNQRVSDAAESRR   97 (113)
T ss_dssp             CCSCH--HHHHHHHHHHHHTT
T ss_pred             cCCCH--HHHHHHHHHHHHcC
Confidence            76543  33456778888776

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.55  E-value=0.00027  Score=49.93  Aligned_cols=97  Identities=14%  Similarity=0.120  Sum_probs=58.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhh--hhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLL--DHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |||.|+|+ |.+|+.++..|+..|  .+++++++++...........  .........+...  .|.    +.++++|++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence            68999996 999999999999988  479999988432100111100  0111123333321  122    346799999


Q ss_pred             EEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |.++|....             ...+.+++.+.+.. .+-++
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~-p~aiv  114 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPII  114 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEE
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC-CCeEE
Confidence            999997641             12356666777766 54443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.53  E-value=6.3e-05  Score=53.44  Aligned_cols=84  Identities=17%  Similarity=0.200  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC---CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .++|.|.||||++|+.+++.|.+++|   ++..++.+.+.     .+.+..   ..-.....++.     ...+.++|++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-----Gk~i~~---~~~~~~~~~~~-----~~~~~~~d~v   68 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-----GQRMGF---AESSLRVGDVD-----SFDFSSVGLA   68 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-----TCEEEE---TTEEEECEEGG-----GCCGGGCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-----Ccceee---ccccchhccch-----hhhhccceEE
Confidence            57999999999999999999987653   56665544211     110010   01111111221     1235679999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhC
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      |.+++..   ....+.+.+.+.+
T Consensus        69 f~a~p~~---~s~~~~~~~~~~g   88 (144)
T d2hjsa1          69 FFAAAAE---VSRAHAERARAAG   88 (144)
T ss_dssp             EECSCHH---HHHHHHHHHHHTT
T ss_pred             EecCCcc---hhhhhccccccCC
Confidence            9988643   4456666777776

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.52  E-value=0.00043  Score=48.81  Aligned_cols=96  Identities=16%  Similarity=0.144  Sum_probs=56.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhc-cCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK-KLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +||.|.|+ |.+|+.++..|+.++.  +++++++++.....+..+..+... ........+|       .+.++++|++|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            58899997 9999999999999883  699999886433111221111111 1122222222       23577899999


Q ss_pred             EcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .+||....             ...+.+++.+.+.+ .+-++
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~  113 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVI  113 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEE
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccC-CCceE
Confidence            99997751             22356667777776 55443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.50  E-value=4.1e-05  Score=55.70  Aligned_cols=79  Identities=14%  Similarity=0.142  Sum_probs=52.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCc-EEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGV-NLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |+|.|.| .|.+|+.+++.|.+.|++|++.+|+     ++..+.+.+.   ++ ....-+       .+.++++|+||-+
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~-----~~~~~~a~~~---~~~~~~~~~-------~~~~~~~DiIila   64 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQ-----QSTCEKAVER---QLVDEAGQD-------LSLLQTAKIIFLC   64 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHT---TSCSEEESC-------GGGGTTCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----chHHHHHHHh---hccceeeee-------ccccccccccccc
Confidence            6899998 5999999999999999999999998     4444322221   21 111111       1356789999987


Q ss_pred             CCCccchhHHHHHHHHHHh
Q 044721           84 VGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~  102 (263)
                      ...   .....+++.+...
T Consensus        65 vp~---~~~~~vl~~l~~~   80 (165)
T d2f1ka2          65 TPI---QLILPTLEKLIPH   80 (165)
T ss_dssp             SCH---HHHHHHHHHHGGG
T ss_pred             CcH---hhhhhhhhhhhhh
Confidence            753   3445566665544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.46  E-value=0.00023  Score=50.17  Aligned_cols=96  Identities=19%  Similarity=0.177  Sum_probs=59.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhh-ccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHF-KKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |||.|.|+ |.+|+.++..|+.++  .+++++++++.....+........ ..........|.       +.++++|++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence            68999996 999999999999887  479998888321100111111111 122344443332       3477899999


Q ss_pred             EcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           82 STVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        82 ~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      .++|....             ...+.+++.+.+.. .+-++
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~-p~aiv  112 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIV  112 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcC-CCcEE
Confidence            99988651             12355666777766 55443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.43  E-value=0.00068  Score=47.68  Aligned_cols=94  Identities=15%  Similarity=0.113  Sum_probs=58.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh--h--hhh-h-ccCCcEEEEccCCCHHHHHHHhcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ--L--LDH-F-KKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~--~~~-~-~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      .||.|+||+|.+|+.++..|..++.  ++++++.+..   +++.+  .  +.+ . ......+...|+   +    .+++
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~---~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~   70 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK---EDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAG   70 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG---HHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTT
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCc---ccccceeecchhhcccccCCceEeeCCH---H----Hhhh
Confidence            3799999999999999999999984  5887775421   11111  1  111 1 123344444444   2    3579


Q ss_pred             cCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           77 VDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        77 ~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +|+||.+||....             ...+.+.+.+.+.+ .+-++
T Consensus        71 aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i~  115 (142)
T d1o6za1          71 SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYIS  115 (142)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEE
T ss_pred             cCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC-CCceE
Confidence            9999999997651             12355666666665 54443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.41  E-value=0.00032  Score=50.56  Aligned_cols=32  Identities=38%  Similarity=0.485  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |+|.|.| .|.+|+.+++.|++.|++|++.+|+
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~   32 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN   32 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCC
Confidence            5799999 6999999999999999999999998

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=6.4e-05  Score=55.38  Aligned_cols=73  Identities=22%  Similarity=0.195  Sum_probs=50.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vv~~   83 (263)
                      .+++|+||+|++|...++.....|++|++++|+     +++.+.+..+   +...+ .|..+.+..+.+-+ ..|.+|.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~-----~~k~~~~~~l---Gad~v-i~~~~~~~~~~l~~~~~~~vvD~  103 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKSL---GASRV-LPRDEFAESRPLEKQVWAGAIDT  103 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHHH---TEEEE-EEGGGSSSCCSSCCCCEEEEEES
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecc-----hhHHHHHHhh---ccccc-cccccHHHHHHHHhhcCCeeEEE
Confidence            479999999999999999999999999999998     6666555544   23222 23333222111222 46889998


Q ss_pred             CCC
Q 044721           84 VGH   86 (263)
Q Consensus        84 a~~   86 (263)
                      .+.
T Consensus       104 Vgg  106 (177)
T d1o89a2         104 VGD  106 (177)
T ss_dssp             SCH
T ss_pred             cch
Confidence            874

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.38  E-value=5.3e-05  Score=55.98  Aligned_cols=92  Identities=20%  Similarity=0.223  Sum_probs=51.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEE-cCCCCCCcchhh-hhhhhcc-CCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLV-RESTLSAPSKSQ-LLDHFKK-LGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |++|.|.||||++|+.+++.|.+.. .++..+. ++.....-++.. ....+.. ......  +..+.   ...+.++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQ--PMSDV---RDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEE--EESCG---GGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccc--cchhh---hhhhcccce
Confidence            5799999999999999999999874 5665443 332221111111 1111111 111111  11111   223457999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhC
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +|.+.+..   ....+.....+.+
T Consensus        76 vf~alp~~---~s~~~~~~~~~~~   96 (179)
T d2g17a1          76 VFLATAHE---VSHDLAPQFLQAG   96 (179)
T ss_dssp             EEECSCHH---HHHHHHHHHHHTT
T ss_pred             eeccccch---hHHHHhhhhhhcC
Confidence            99998753   3445566666666

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.36  E-value=0.0011  Score=46.91  Aligned_cols=75  Identities=27%  Similarity=0.337  Sum_probs=47.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhh--hccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDH--FKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |||.|+|+ |++|+.++..|+.+|  .++++.+++......+.....+.  ...........|.       +.++++|++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            78999995 999999999999987  37888888732110001111111  1122234444443       346789999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      |.+||..
T Consensus        74 VitaG~~   80 (146)
T d1hyha1          74 ISTLGNI   80 (146)
T ss_dssp             EECCSCG
T ss_pred             EEecccc
Confidence            9999964

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.34  E-value=0.00019  Score=52.60  Aligned_cols=75  Identities=19%  Similarity=0.162  Sum_probs=43.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |++|.|.||||++|+.+++.|.+.. .++..+..+...  -.+.. ....+.    ........+.+.   ..+++|++|
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~a--G~~i~~~~p~~~----~~~~~~~~~~~~---~~~~~dvvf   71 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYA--GKKLEEIFPSTL----ENSILSEFDPEK---VSKNCDVLF   71 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT--TSBHHHHCGGGC----CCCBCBCCCHHH---HHHHCSEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccC--CCcccccCchhh----ccccccccCHhH---hccccceEE
Confidence            5699999999999999999998764 455555433211  11111 111111    111122234443   345799999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      .+.+..
T Consensus        72 ~a~p~~   77 (176)
T d1vkna1          72 TALPAG   77 (176)
T ss_dssp             ECCSTT
T ss_pred             EccccH
Confidence            988765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.34  E-value=0.00027  Score=51.72  Aligned_cols=75  Identities=19%  Similarity=0.237  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC---HHHHHHHhc--C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN---HESLVKAIK--Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~--~   76 (263)
                      .+.+|+|.|+ |.+|...++.+...|+ +|++++++     +++.+..+++. . -++  .|..+   .+.+.+...  +
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~-----~~r~~~a~~lG-a-~~~--i~~~~~~~~~~v~~~t~g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR-----PICVEAAKFYG-A-TDI--LNYKNGHIEDQVMKLTNGKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC-----HHHHHHHHHHT-C-SEE--ECGGGSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccch-----hhhHHHHHhhC-c-ccc--ccccchhHHHHHHHHhhccC
Confidence            3578999986 9999999999999997 68888888     66666655552 1 122  24433   344445443  5


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|.++|..
T Consensus        97 ~D~vid~~g~~  107 (174)
T d1jqba2          97 VDRVIMAGGGS  107 (174)
T ss_dssp             EEEEEECSSCT
T ss_pred             cceEEEccCCH
Confidence            99999999865

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.33  E-value=0.0012  Score=48.12  Aligned_cols=75  Identities=20%  Similarity=0.237  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      ..+|.|.| -|.+|+.+++.|++.|++|++.+|+     +++.+.+......... .. .....+++.+.+..+|.++.+
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~~~-~~-~a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTK-VL-GAHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSS-CE-ECSSHHHHHHHBCSSCEEEEC
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHHhcccccc-cc-chhhhhhhhhhhcccceEEEe
Confidence            35789999 5999999999999999999999999     5454432211000000 00 123455666666677777666


Q ss_pred             CCC
Q 044721           84 VGH   86 (263)
Q Consensus        84 a~~   86 (263)
                      ...
T Consensus        74 ~~~   76 (176)
T d2pgda2          74 VKA   76 (176)
T ss_dssp             SCT
T ss_pred             cCc
Confidence            543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00082  Score=48.77  Aligned_cols=77  Identities=14%  Similarity=0.180  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-----C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-----Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~   76 (263)
                      .+.+++|.|+ |.+|...+..+...|+ +|++++++     +++.+..+++. .. .++..+-.+.....+.+.     +
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~-----~~rl~~a~~~G-a~-~~~~~~~~~~~~~~~~~~~~~g~g   97 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS-----ATRLSKAKEIG-AD-LVLQISKESPQEIARKVEGQLGCK   97 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHTT-CS-EEEECSSCCHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCC-----HHHHHHHHHhC-Cc-ccccccccccccccccccccCCCC
Confidence            3578999986 9999999999999998 69988988     67776655552 11 233334445544444432     6


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|.+.|..
T Consensus        98 ~Dvvid~~G~~  108 (171)
T d1pl8a2          98 PEVTIECTGAE  108 (171)
T ss_dssp             CSEEEECSCCH
T ss_pred             ceEEEeccCCc
Confidence            89999999864

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.31  E-value=0.0017  Score=45.63  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=57.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh-h---hhhh--ccCCcEEEEccCCCHHHHHHHhcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ-L---LDHF--KKLGVNLVIGDVLNHESLVKAIKQ   76 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~---~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   76 (263)
                      .||.|+|+ |.+|++++..|+.+|.  ++++++++     +++.+ .   +++.  ..........  .+.    +.+++
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~-----~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~----~~~~d   69 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIA-----KERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRD   69 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec-----cccchhHHHHHHhccccCCCceeecC--CCH----HHhhC
Confidence            58999996 9999999999999984  69998888     33322 1   1111  0112222221  111    24668


Q ss_pred             cCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           77 VDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        77 ~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +|++|.+||....             ...+.+++.+.+.+ .+.++
T Consensus        70 aDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~-p~ai~  114 (143)
T d1llda1          70 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIY  114 (143)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred             CcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhC-CCeEE
Confidence            9999999998751             12355666677776 55443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.30  E-value=0.0004  Score=50.45  Aligned_cols=77  Identities=13%  Similarity=0.176  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH-HHHHHHh--cCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH-ESLVKAI--KQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~--~~~d~   79 (263)
                      +.+++|+|++|.+|...+..+...|. +|++++++     +++.+.+.++. .. ..+..+-.|. +.+.+..  .++|+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~-----~~~~~~~~~~G-a~-~~i~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRAG-AD-YVINASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHHT-CS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccc-----hhhHHHHHHcC-Cc-eeeccCCcCHHHHHHHHhhcccchh
Confidence            56899999999999999999998885 78888888     66666655552 11 2232222222 2333332  25899


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|.++|..
T Consensus       101 vid~~g~~  108 (170)
T d1jvba2         101 VIDLNNSE  108 (170)
T ss_dssp             EEESCCCH
T ss_pred             hhcccccc
Confidence            99999864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.28  E-value=0.0014  Score=42.63  Aligned_cols=86  Identities=21%  Similarity=0.197  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChhH-HHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIG-KFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      +.+++.+.|- |++| +++|+.|.++|++|...++...    ...   +.+...++.+..++-  ++    .++++|.||
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~----~~~---~~L~~~Gi~v~~g~~--~~----~i~~~d~vV   72 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADG----VVT---QRLAQAGAKIYIGHA--EE----HIEGASVVV   72 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCS----HHH---HHHHHTTCEEEESCC--GG----GGTTCSEEE
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCC----hhh---hHHHHCCCeEEECCc--cc----cCCCCCEEE
Confidence            4678999995 7777 7789999999999999988732    122   222234565554333  22    245789999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcc
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      ...+...-  .. -+..+.+.+ ++
T Consensus        73 ~S~AI~~~--np-el~~A~~~g-ip   93 (96)
T d1p3da1          73 VSSAIKDD--NP-ELVTSKQKR-IP   93 (96)
T ss_dssp             ECTTSCTT--CH-HHHHHHHTT-CC
T ss_pred             ECCCcCCC--CH-HHHHHHHcC-CC
Confidence            98886531  11 245566666 54

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.00015  Score=52.98  Aligned_cols=72  Identities=21%  Similarity=0.291  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhc-cCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-KLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      ++++++|.|+ |+.+++++..|.+.+.+|+++.|+     .++.+.+ +.+. ..++.....|-.       .+..+|++
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~-----~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~dii   83 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLV   83 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccch-----HHHHHHHHHHHhhccccchhhhccc-------ccccccee
Confidence            5689999995 999999999999988899999999     5554433 2221 123334443322       24578999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      ||+.+..
T Consensus        84 IN~tp~g   90 (171)
T d1p77a1          84 INATSAG   90 (171)
T ss_dssp             EECCCC-
T ss_pred             eeccccc
Confidence            9998765

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.27  E-value=0.00063  Score=48.95  Aligned_cols=76  Identities=20%  Similarity=0.269  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      +-+++|.|+ |-.|..-++.....|..|++++.+     .++.+.++......++.   -..+.+.+++.++++|+||.+
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~-----~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~~aDivI~a  102 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGA  102 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCc-----HHHHHHHHHhhccccee---ehhhhhhHHHhhccCcEEEEe
Confidence            458999996 999999999999999999999998     66666555554444443   356778899999999999999


Q ss_pred             CCCcc
Q 044721           84 VGHTL   88 (263)
Q Consensus        84 a~~~~   88 (263)
                      +-.+.
T Consensus       103 alipG  107 (168)
T d1pjca1         103 VLVPG  107 (168)
T ss_dssp             CCCTT
T ss_pred             eecCC
Confidence            87664

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.25  E-value=0.0021  Score=46.01  Aligned_cols=92  Identities=17%  Similarity=0.116  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh-h---hhh---hccCCcEEEEccCCCHHHHHHHh
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ-L---LDH---FKKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~---~~~---~~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      .+||.|.|+ |.+|+.++..|+.+|.  ++++++++.     ++.+ .   +++   +..........|+       +.+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~-----~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~   86 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLE-----DKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVT   86 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH-----HHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGG
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc-----chhHHHHHHHhccccccCCCeEEeccch-------hhc
Confidence            469999996 9999999999999984  699888873     3322 1   111   1111111222233       246


Q ss_pred             cCcCEEEEcCCCccc-------------hhHHHHHHHHHHhCCcceee
Q 044721           75 KQVDVVISTVGHTLL-------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        75 ~~~d~vv~~a~~~~~-------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +++|+||..||....             ...+.+++.+.+.+ .+-++
T Consensus        87 ~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~-p~aii  133 (160)
T d1i0za1          87 ANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCII  133 (160)
T ss_dssp             TTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred             ccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC-CCcEE
Confidence            789999999998751             22356677777776 55544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.24  E-value=9.7e-05  Score=54.54  Aligned_cols=91  Identities=16%  Similarity=0.174  Sum_probs=57.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc-cCC--cEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-KLG--VNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~--~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |+|.|.|+ |..|.+++..|++.|++|.+.+|...   ++..+.+.... .+.  ......++.-.++++++++++|.|+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~---~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii   76 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD---TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL   76 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG---HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc---HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhh
Confidence            68999995 99999999999999999999988521   11111111110 011  1111112333567888999999999


Q ss_pred             EcCCCccchhHHHHHHHHHHh
Q 044721           82 STVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      .+.....   .+.+++.+...
T Consensus        77 ~avps~~---~~~~~~~l~~~   94 (180)
T d1txga2          77 LGVSTDG---VLPVMSRILPY   94 (180)
T ss_dssp             ECSCGGG---HHHHHHHHTTT
T ss_pred             cccchhh---hHHHHHhhccc
Confidence            9887543   34455554443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.23  E-value=6.9e-05  Score=53.90  Aligned_cols=79  Identities=15%  Similarity=0.042  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCC-----C--CEEEEEcCCCCCCcchhhhhh----hhccCCcEEEEccCCCHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAG-----H--PTFVLVRESTLSAPSKSQLLD----HFKKLGVNLVIGDVLNHESLV   71 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~   71 (263)
                      +++||.|+||+|.+|++++..|+..+     .  ++++.+.+..   ..+.+.+.    .........+.  ..  .+..
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~---~~~~~~l~~~~~~~~~~~~~~~~--~~--~~~~   74 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLLKDVI--AT--DKEE   74 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTEEEEE--EE--SCHH
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc---hhhhhhhhhhhcccccccccccc--cC--cccc
Confidence            56899999999999999999998754     1  2344333311   22222111    11111222221  11  1234


Q ss_pred             HHhcCcCEEEEcCCCcc
Q 044721           72 KAIKQVDVVISTVGHTL   88 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~~   88 (263)
                      +.++++|++|.++|...
T Consensus        75 ~~~~~~dvVVitag~~~   91 (154)
T d5mdha1          75 IAFKDLDVAILVGSMPR   91 (154)
T ss_dssp             HHTTTCSEEEECCSCCC
T ss_pred             cccCCceEEEEecccCC
Confidence            67889999999999865

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.22  E-value=0.001  Score=48.79  Aligned_cols=36  Identities=19%  Similarity=0.232  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +.++++.|.| .|.||+.+++.|..-|.+|++.+|.+
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccCceEEEec-cccccccceeeeeccccccccccccc
Confidence            3578999999 59999999999999999999998875

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.21  E-value=0.0015  Score=45.92  Aligned_cols=71  Identities=17%  Similarity=0.141  Sum_probs=47.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhh----hhh---hccCCcEEEE-ccCCCHHHHHHHh
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQL----LDH---FKKLGVNLVI-GDVLNHESLVKAI   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~----~~~---~~~~~~~~~~-~D~~~~~~~~~~~   74 (263)
                      |||.|.|+ |.+|+.++..|+.+|  .++++++++     +++.+-    +++   .......+.. .|+       +.+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~-----~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~   67 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLL   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecc-----cchhhHHHHHHhhhccccCCCCccccCCCH-------HHh
Confidence            68999996 999999999999887  369999888     333221    111   1111222222 233       357


Q ss_pred             cCcCEEEEcCCCcc
Q 044721           75 KQVDVVISTVGHTL   88 (263)
Q Consensus        75 ~~~d~vv~~a~~~~   88 (263)
                      ++.|++|..||...
T Consensus        68 ~~adiVvitag~~~   81 (142)
T d1ojua1          68 KGSEIIVVTAGLAR   81 (142)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             ccccEEEEeccccC
Confidence            78999999999764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.20  E-value=0.00051  Score=47.47  Aligned_cols=86  Identities=20%  Similarity=0.285  Sum_probs=61.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA-IKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vv~~   83 (263)
                      |.++|.| .|.+|+.+++.|.  |++|+++..+     +++.+.+   ...++.++.+|.++++.++++ +++++.++-+
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d-----~~~~~~~---~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAED-----ENVRKKV---LRSGANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESC-----TTHHHHH---HHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcc-----hHHHHHH---HhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            5688888 5999999999994  6678888877     4443322   245789999999999998874 6789999987


Q ss_pred             CCCccchhHHHHHHHHHHhC
Q 044721           84 VGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ....  .....++..+++..
T Consensus        70 ~~~d--~~n~~~~~~~r~~~   87 (129)
T d2fy8a1          70 LESD--SETIHCILGIRKID   87 (129)
T ss_dssp             CSSH--HHHHHHHHHHHHHC
T ss_pred             ccch--hhhHHHHHHHHHHC
Confidence            7643  22333444555554

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00059  Score=48.90  Aligned_cols=71  Identities=18%  Similarity=0.221  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |+.+|+++|.| .|.||+.+++.|...|.+|+++.++     +.+.  +++. -.+..        ...+++++...|++
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d-----p~~a--l~A~-~dG~~--------v~~~~~a~~~adiv   83 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEID-----PINA--LQAA-MEGYE--------VTTMDEACQEGNIF   83 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHH--HHHH-HTTCE--------ECCHHHHTTTCSEE
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecc-----cchh--HHhh-cCceE--------eeehhhhhhhccEE
Confidence            45789999999 8999999999999999999999988     3221  1222 11222        22456778889999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |-+.|..+
T Consensus        84 vtaTGn~~   91 (163)
T d1li4a1          84 VTTTGCID   91 (163)
T ss_dssp             EECSSCSC
T ss_pred             EecCCCcc
Confidence            99988765

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.17  E-value=0.00078  Score=48.60  Aligned_cols=75  Identities=17%  Similarity=0.196  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~d~   79 (263)
                      .+.+++|.|+ |.+|...++.+...|++|++++++     +++.+...++   +...+ .|..+.   +.+.+...+.|.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~-----~~~~~~a~~~---Ga~~~-i~~~~~~~~~~~~~~~~g~~~   96 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDID-----DAKLELARKL---GASLT-VNARQEDPVEAIQRDIGGAHG   96 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEE-EETTTSCHHHHHHHHHSSEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecch-----hhHHHhhhcc---Ccccc-ccccchhHHHHHHHhhcCCcc
Confidence            4678999986 999999999888899999999998     6666655554   22211 244433   334444556676


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|-+++..
T Consensus        97 ~i~~~~~~  104 (166)
T d1llua2          97 VLVTAVSN  104 (166)
T ss_dssp             EEECCSCH
T ss_pred             cccccccc
Confidence            66666643

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.17  E-value=0.00041  Score=51.31  Aligned_cols=73  Identities=22%  Similarity=0.270  Sum_probs=46.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEE-EcCCCCCCcchhhhh-hhhccCCcEEEEccCCCH---HHHHHHh-cCcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNH---ESLVKAI-KQVD   78 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d   78 (263)
                      .+|||+||+|.+|+..++.....|+++++. +++     +++...+ ..+   +.. ...|..++   +.+++.. +++|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-----~e~~~~l~~~~---gad-~vi~~~~~~~~~~~~~~~~~GvD  102 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-----QEKCLFLTSEL---GFD-AAVNYKTGNVAEQLREACPGGVD  102 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-----HHHHHHHHHHS---CCS-EEEETTSSCHHHHHHHHCTTCEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccch-----HHHHhhhhhcc---cce-EEeeccchhHHHHHHHHhccCce
Confidence            679999999999999999988899876554 444     3333222 222   222 22355543   3333333 3799


Q ss_pred             EEEEcCCC
Q 044721           79 VVISTVGH   86 (263)
Q Consensus        79 ~vv~~a~~   86 (263)
                      +++.+.|.
T Consensus       103 vv~D~vGg  110 (187)
T d1vj1a2         103 VYFDNVGG  110 (187)
T ss_dssp             EEEESSCH
T ss_pred             EEEecCCc
Confidence            99999984

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.15  E-value=0.00024  Score=50.81  Aligned_cols=68  Identities=22%  Similarity=0.224  Sum_probs=48.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |+|.+.| +|.+|+++++.|.+.|+++++..|+     +++.+.+....  ++..       ..+.+++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~-----~~~~~~l~~~~--g~~~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAEQL--ALPY-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHHHH--TCCB-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcCh-----HHhHHhhcccc--ceee-------echhhhhhhccceeeeec
Confidence            6899998 6999999999999999999999988     55554332211  1111       123456677999999887


Q ss_pred             CCc
Q 044721           85 GHT   87 (263)
Q Consensus        85 ~~~   87 (263)
                      -+.
T Consensus        66 kp~   68 (152)
T d2ahra2          66 KPQ   68 (152)
T ss_dssp             CGG
T ss_pred             chH
Confidence            643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.0012  Score=47.25  Aligned_cols=73  Identities=18%  Similarity=0.143  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhh-hhhhh------ccCCcEEEEccCCCHHHHHHH
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ-LLDHF------KKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~~~~~------~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      +..||.|+|+ |.+|+.++..|+..|.  ++++++++     +++.+ ...++      ..........|+       +.
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~-----~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~   84 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDAD-----TDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NV   84 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSC-----HHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GG
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCC-----chhhhccHHHHhCcchhcCCCeEEeccch-------hh
Confidence            3458999996 9999999999999884  69998887     33322 11111      111222223333       34


Q ss_pred             hcCcCEEEEcCCCcc
Q 044721           74 IKQVDVVISTVGHTL   88 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~   88 (263)
                      ++++|++|.+||...
T Consensus        85 ~~~adivvitag~~~   99 (159)
T d2ldxa1          85 SANSKLVIITAGARM   99 (159)
T ss_dssp             GTTEEEEEECCSCCC
T ss_pred             hccccEEEEeccccc
Confidence            568999999999865

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.06  E-value=0.0011  Score=46.60  Aligned_cols=76  Identities=17%  Similarity=0.228  Sum_probs=46.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhh--hhhhccCCcEEE-EccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL--LDHFKKLGVNLV-IGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +||.|+|+ |.+|+.++..|+..+ .++++++.++.....+....  ...+......+. ..|+       +.+++.|++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCEE
Confidence            68999996 999999999999887 48888888743211111111  011111122222 2333       235689999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |.+||...
T Consensus        74 vitag~~~   81 (142)
T d1uxja1          74 VVTSGAPR   81 (142)
T ss_dssp             EECCSCC-
T ss_pred             EEeeeccC
Confidence            99999764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.06  E-value=0.00062  Score=49.37  Aligned_cols=68  Identities=21%  Similarity=0.344  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ++++|+|.|+ |+.+++++..|.+.|. +|.++.|+     .++.+.+....  +...+  +..+       ...+|+||
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~-----~~ka~~L~~~~--~~~~~--~~~~-------~~~~DliI   78 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARN-----VKTGQYLAALY--GYAYI--NSLE-------NQQADILV   78 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSC-----HHHHHHHHHHH--TCEEE--SCCT-------TCCCSEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeccc-----HHHHHHHHHhh--hhhhh--hccc-------ccchhhhe
Confidence            4678999995 9999999999999996 79999998     55554333321  11211  1111       13689999


Q ss_pred             EcCCCc
Q 044721           82 STVGHT   87 (263)
Q Consensus        82 ~~a~~~   87 (263)
                      |+.+..
T Consensus        79 NaTpiG   84 (167)
T d1npya1          79 NVTSIG   84 (167)
T ss_dssp             ECSSTT
T ss_pred             eccccC
Confidence            987643

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.03  E-value=0.00091  Score=46.13  Aligned_cols=30  Identities=23%  Similarity=0.310  Sum_probs=26.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVL   34 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   34 (263)
                      |+|.|.|++|..|+.+.+.+.++|++++..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            589999999999999999999999887654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.00  E-value=0.0053  Score=43.34  Aligned_cols=98  Identities=19%  Similarity=0.234  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhh--hhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL--LDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .+||.|.|+ |.+|+.++..|...+ .++.++++++..........  ...+......+...|  +    .+.+++.|++
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advv   75 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVV   75 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEE
Confidence            568999995 999999998888887 47888888743210011111  111112223333222  1    1356789999


Q ss_pred             EEcCCCccc------------------hhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLL------------------GDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~------------------~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +.++|....                  ...+.+.+.+.+.. .+-++
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aiv  121 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFI  121 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEE
Confidence            999996541                  11356666777776 55544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.95  E-value=0.0019  Score=47.09  Aligned_cols=32  Identities=19%  Similarity=0.290  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |+|.|.| .|.+|+.+++.|++.||+|.+.+|+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~   33 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRT   33 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECC
Confidence            5799999 7999999999999999999999998

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.95  E-value=0.00037  Score=49.73  Aligned_cols=67  Identities=21%  Similarity=0.248  Sum_probs=46.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTV   84 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a   84 (263)
                      |||.|.| .|.+|+.+++.|++.|++|++.+|+..     +....... +.++  .       ++..++++.+|+||.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~-----~~~~~~~~-~~~~--~-------~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRS-----PSTIERAR-TVGV--T-------ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCC-----HHHHHHHH-HHTC--E-------ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchh-----HHHHHhhh-cccc--c-------ccHHHHHhhcCeEEEEe
Confidence            5799998 699999999999999999998877632     22111111 1111  1       12345678899999998


Q ss_pred             CCc
Q 044721           85 GHT   87 (263)
Q Consensus        85 ~~~   87 (263)
                      ...
T Consensus        65 ~~~   67 (152)
T d1i36a2          65 TPG   67 (152)
T ss_dssp             CGG
T ss_pred             cCc
Confidence            754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.94  E-value=0.00019  Score=53.07  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=44.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcC-CCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRE-STLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      +++.+|.|.||||+.|+.+++.|.+.. .++..+..+ ...  ....+....+...      .+.......+..++++|+
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Dv   74 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAG--EQFGSVFPHLITQ------DLPNLVAVKDADFSNVDA   74 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTT--SCHHHHCGGGTTS------CCCCCBCGGGCCGGGCSE
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCC--Ccccccccccccc------ccccchhhhhhhhcccce
Confidence            456689999999999999999999864 355554422 211  1111111111110      111111222334568999


Q ss_pred             EEEcCCCc
Q 044721           80 VISTVGHT   87 (263)
Q Consensus        80 vv~~a~~~   87 (263)
                      +|.+.+..
T Consensus        75 vf~alp~~   82 (183)
T d2cvoa1          75 VFCCLPHG   82 (183)
T ss_dssp             EEECCSSS
T ss_pred             eeeccccc
Confidence            99988765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.94  E-value=0.0012  Score=47.97  Aligned_cols=76  Identities=16%  Similarity=0.187  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEE--ccCCC-HHHHHHHh--cC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI--GDVLN-HESLVKAI--KQ   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~D~~~-~~~~~~~~--~~   76 (263)
                      .+.+++|.|+ |++|...+..+...|. +|++++++     +++.+....+   +...+.  .|-.+ .....+..  .+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~-----~~k~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G   98 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDIN-----KDKFAKAKEV---GATECVNPQDYKKPIQEVLTEMSNGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCc-----HHHHHHHHHh---CCeeEEecCCchhHHHHHHHHHhcCC
Confidence            3578999998 7899999999999985 78888888     6666554444   222221  22222 22223333  37


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|.+.|..
T Consensus        99 ~D~vid~~G~~  109 (176)
T d2jhfa2          99 VDFSFEVIGRL  109 (176)
T ss_dssp             BSEEEECSCCH
T ss_pred             CCEEEecCCch
Confidence            99999999875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.89  E-value=0.00034  Score=52.46  Aligned_cols=74  Identities=22%  Similarity=0.302  Sum_probs=48.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEcc-------------CCCHHHHH
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD-------------VLNHESLV   71 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-------------~~~~~~~~   71 (263)
                      |+|.|.| .|++|..++..|++.|++|++.+.+     +++.+.+..-   .....+-+             +.-..++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n-----~~~i~~ln~g---~~p~~e~~~~~~l~~~~~~~~~~~~~~~~   71 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS-----STKIDLINQG---KSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHTT---CCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCC-----HHHHHHhccc---CCcccchhhhhhhhhhhcccccccCCCHH
Confidence            6899998 6999999999999999999999987     4443322211   11111100             01112345


Q ss_pred             HHhcCcCEEEEcCCCc
Q 044721           72 KAIKQVDVVISTVGHT   87 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~   87 (263)
                      ++++.+|+++.+.+.+
T Consensus        72 ~~i~~~d~i~i~VpTP   87 (202)
T d1mv8a2          72 KAVLDSDVSFICVGTP   87 (202)
T ss_dssp             HHHHTCSEEEECCCCC
T ss_pred             HHHhhCCEEEEecCcc
Confidence            5667899999998865

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.84  E-value=0.0014  Score=47.38  Aligned_cols=80  Identities=18%  Similarity=0.167  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccC--CCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDV--LNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~~~d~v   80 (263)
                      .+|+++|.|.|.-+|+.++..|+++|++|+.+..+...    .........  -......|+  ...+.+++....+|++
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~lk~~~~~aDIv  101 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ----KFTRGESLK--LNKHHVEDLGEYSEDLLKKCSLDSDVV  101 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE----EEESCCCSS--CCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc----cccccccee--eeeeccccccccchhHHhhccccCCEE
Confidence            57999999999999999999999999999876654211    000000000  011122233  3466788888899999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |..+|...
T Consensus       102 IsavG~p~  109 (171)
T d1edza1         102 ITGVPSEN  109 (171)
T ss_dssp             EECCCCTT
T ss_pred             EEccCCCc
Confidence            99998754

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.82  E-value=0.0019  Score=46.99  Aligned_cols=77  Identities=14%  Similarity=0.162  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC--HHHHHHHh--cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN--HESLVKAI--KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~--~~~   77 (263)
                      .+.+++|.|+ |.||...++.+...|+. |++.+++     +++.+..+++..  -.++...-.|  ...+.+..  .++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~-----~~r~~~a~~~Ga--~~~i~~~~~~~~~~~~~~~~~~~G~   99 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDIN-----GEKFPKAKALGA--TDCLNPRELDKPVQDVITELTAGGV   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHTTC--SEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccc-----hHHHHHHHHhCC--CcccCCccchhhhhhhHhhhhcCCC
Confidence            3578999985 99999999999999984 7777777     666666565521  1222211112  23333322  389


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|.+.|..
T Consensus       100 d~vie~~G~~  109 (174)
T d1e3ia2         100 DYSLDCAGTA  109 (174)
T ss_dssp             SEEEESSCCH
T ss_pred             cEEEEecccc
Confidence            9999999965

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.81  E-value=0.0015  Score=46.96  Aligned_cols=74  Identities=18%  Similarity=0.233  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC---HHHHHHHhcCcCE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN---HESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~d~   79 (263)
                      .+.+++|.|+ |.+|...++.+...|++|++++++     +++.+.++.+   ++..+. |..+   .+.+.+...+.|.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~-----~~r~~~~k~~---Ga~~~~-~~~~~~~~~~~~~~~~~~~~   96 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAKEL---GADLVV-NPLKEDAAKFMKEKVGGVHA   96 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHT---TCSEEE-CTTTSCHHHHHHHHHSSEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCC-----HHHhhhhhhc---Ccceec-ccccchhhhhcccccCCCce
Confidence            3578999875 999999999999999999999888     6666555554   333332 3332   3445566677777


Q ss_pred             EEEcCCC
Q 044721           80 VISTVGH   86 (263)
Q Consensus        80 vv~~a~~   86 (263)
                      +|.+++.
T Consensus        97 ~v~~~~~  103 (168)
T d1rjwa2          97 AVVTAVS  103 (168)
T ss_dssp             EEESSCC
T ss_pred             EEeecCC
Confidence            7777764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.78  E-value=0.0033  Score=45.74  Aligned_cols=78  Identities=14%  Similarity=0.144  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-HHHHHHHh--cCcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-HESLVKAI--KQVD   78 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~--~~~d   78 (263)
                      .+.+|+|+|+ |++|...++.+...|+ +|++++++     +++++....+.. ...+-.-|-.+ .+.+.+..  .++|
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~-----~~kl~~Ak~~GA-~~~in~~~~~~~~~~~~~~~~g~G~d  101 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLN-----KDKFEKAMAVGA-TECISPKDSTKPISEVLSEMTGNNVG  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHHTC-SEEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCc-----HHHHHHHHhcCC-cEEECccccchHHHHHHHHhccccce
Confidence            3568999985 9999999999999995 79999998     777776666522 11111122222 23333433  3799


Q ss_pred             EEEEcCCCc
Q 044721           79 VVISTVGHT   87 (263)
Q Consensus        79 ~vv~~a~~~   87 (263)
                      ++|.+.|..
T Consensus       102 ~vi~~~g~~  110 (176)
T d1d1ta2         102 YTFEVIGHL  110 (176)
T ss_dssp             EEEECSCCH
T ss_pred             EEEEeCCch
Confidence            999999865

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00076  Score=50.07  Aligned_cols=99  Identities=16%  Similarity=0.286  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh---hhhhhccCCc-E----------EEEccCCCH
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ---LLDHFKKLGV-N----------LVIGDVLNH   67 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~-~----------~~~~D~~~~   67 (263)
                      |+-++|.|.|+ |.+|+.++..++..|++|++.+++++........   .+..+...+. .          .....+.-.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~   80 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS   80 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence            44589999996 9999999999999999999999984221000000   0011100000 0          000011112


Q ss_pred             HHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHh
Q 044721           68 ESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEA  102 (263)
Q Consensus        68 ~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~  102 (263)
                      .++.++++++|.|+-+.... ....+.++..+.+.
T Consensus        81 ~d~~~a~~~ad~ViEav~E~-l~~K~~v~~~l~~~  114 (192)
T d1f0ya2          81 TDAASVVHSTDLVVEAIVEN-LKVKNELFKRLDKF  114 (192)
T ss_dssp             SCHHHHTTSCSEEEECCCSC-HHHHHHHHHHHTTT
T ss_pred             chhHhhhcccceehhhcccc-hhHHHHHHHHHhhh
Confidence            23456777899999987643 45556666666554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.77  E-value=0.0027  Score=46.02  Aligned_cols=75  Identities=13%  Similarity=0.244  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEE-EEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHH---HHHHHhc-Cc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHE---SLVKAIK-QV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~-~~   77 (263)
                      .+.+++|.|+ |.+|...++.+...|++++ +++++     +++.+.++++..  .+++  |..+++   .+.++.. ++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~-----~~k~~~a~~~Ga--~~~i--~~~~~~~~~~i~~~t~gg~   97 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV-----ESRLELAKQLGA--THVI--NSKTQDPVAAIKEITDGGV   97 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC-----HHHHHHHHHHTC--SEEE--ETTTSCHHHHHHHHTTSCE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccH-----HHHHHHHHHcCC--eEEE--eCCCcCHHHHHHHHcCCCC
Confidence            3568999997 9999999999988898654 45566     666666565521  2333  444432   3333333 69


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|.+.|..
T Consensus        98 D~vid~~G~~  107 (174)
T d1f8fa2          98 NFALESTGSP  107 (174)
T ss_dssp             EEEEECSCCH
T ss_pred             cEEEEcCCcH
Confidence            9999999864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0041  Score=43.88  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   37 (263)
                      ||+|.|.|+||-||.....-+.+.  .++|.+++-+
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            578999999999999999999886  3678877654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.75  E-value=0.0019  Score=46.80  Aligned_cols=77  Identities=16%  Similarity=0.150  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCCCCCCcchhhhhhhhccCCcEEEEc-cC-CCHHHHHHHh--cCc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIG-DV-LNHESLVKAI--KQV   77 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~-~~~~~~~~~~--~~~   77 (263)
                      .+.+++|.|+ |++|...++.+...|+. |++++++     +++.+....+...  +++.. +- .+.....+..  .++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~-----~~k~~~ak~lGa~--~~i~~~~~~~~~~~~~~~~~~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN-----KDKFARAKEFGAT--ECINPQDFSKPIQEVLIEMTDGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHHTCS--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc-----HHHHHHHHHhCCc--EEEeCCchhhHHHHHHHHHcCCCC
Confidence            3578999997 78999999999999975 5555566     5666655555211  22211 11 1222222222  379


Q ss_pred             CEEEEcCCCc
Q 044721           78 DVVISTVGHT   87 (263)
Q Consensus        78 d~vv~~a~~~   87 (263)
                      |++|.+.|..
T Consensus       100 D~vid~~G~~  109 (176)
T d2fzwa2         100 DYSFECIGNV  109 (176)
T ss_dssp             SEEEECSCCH
T ss_pred             cEeeecCCCH
Confidence            9999999864

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.73  E-value=0.0025  Score=45.37  Aligned_cols=71  Identities=18%  Similarity=0.268  Sum_probs=53.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      |+.+|+++|.| -|.+|+.++++|...|.+|+++..+     |-+  .+++. -.+.++        ..++++++..|++
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D-----Pi~--alqA~-mdGf~v--------~~~~~a~~~aDi~   82 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEID-----PIC--AIQAV-MEGFNV--------VTLDEIVDKGDFF   82 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHH--HHHHH-TTTCEE--------CCHHHHTTTCSEE
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecC-----chh--hHHHH-hcCCcc--------CchhHccccCcEE
Confidence            56789999999 7999999999999999999999888     322  22332 123332        3446788889999


Q ss_pred             EEcCCCcc
Q 044721           81 ISTVGHTL   88 (263)
Q Consensus        81 v~~a~~~~   88 (263)
                      |-+.|..+
T Consensus        83 vTaTGn~~   90 (163)
T d1v8ba1          83 ITCTGNVD   90 (163)
T ss_dssp             EECCSSSS
T ss_pred             EEcCCCCc
Confidence            99998765

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.72  E-value=0.00056  Score=49.59  Aligned_cols=91  Identities=10%  Similarity=0.069  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ||+|+|.| .|.+|..+++.|.+.|+  +|++.+|+     ++..+.+...  ........+.   +  ......+|.++
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-----~~~~~~a~~~--~~~~~~~~~~---~--~~~~~~~dlIi   67 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISKAVDL--GIIDEGTTSI---A--KVEDFSPDFVM   67 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHHHT--TSCSEEESCG---G--GGGGTCCSEEE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-----hHHHHHHHHh--hcchhhhhhh---h--hhhcccccccc
Confidence            46899998 59999999999999996  57777777     4443322222  1111111111   1  11233689999


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .+..+.   ...++++.....-....++.
T Consensus        68 la~p~~---~~~~vl~~l~~~~~~~~ii~   93 (171)
T d2g5ca2          68 LSSPVR---TFREIAKKLSYILSEDATVT   93 (171)
T ss_dssp             ECSCHH---HHHHHHHHHHHHSCTTCEEE
T ss_pred             ccCCch---hhhhhhhhhhcccccccccc
Confidence            888753   44556666555431344443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.70  E-value=0.0008  Score=49.66  Aligned_cols=92  Identities=14%  Similarity=0.128  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhh-hhhccCCc-EEEEccCCCHHHHHH---------
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKKLGV-NLVIGDVLNHESLVK---------   72 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~-~~~~~D~~~~~~~~~---------   72 (263)
                      -++|.|.|+ |.+|+.++..++..|++|++.++++     +..+.. +... ..+ ..+......+....+         
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~-----~~l~~~~~~i~-~~l~~~~~~~~~~~~~~~~~~~~i~~~~   76 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE-----HGIEQGLAEAA-KLLVGRVDKGRMTPAKMAEVLNGIRPTL   76 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH-----HHHHHHHHHHH-HHHHHHHTTTSSCHHHHHHHHHHEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH-----HHHhhhhhhhh-hhHHhhhcccccchhhhhhhhceeeccc
Confidence            468999996 9999999999999999999999984     322211 0000 000 000001111222221         


Q ss_pred             ---HhcCcCEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           73 ---AIKQVDVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        73 ---~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                         .+.++|.|+-+... .....+.++..+.+.-
T Consensus        77 ~~~~~~~adlViEav~E-~l~~K~~lf~~l~~~~  109 (186)
T d1wdka3          77 SYGDFGNVDLVVEAVVE-NPKVKQAVLAEVENHV  109 (186)
T ss_dssp             SSTTGGGCSEEEECCCS-CHHHHHHHHHHHHTTS
T ss_pred             ccccccccceeeeeecc-hHHHHHHHHHHHHhhc
Confidence               23468999996554 4666677887777664

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.67  E-value=0.0065  Score=43.06  Aligned_cols=83  Identities=19%  Similarity=0.298  Sum_probs=46.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCC---EEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      -+|.|.||||++|+.+++.|.+..+.   +..++.+.     ...+...   ...-.....+..+     ..+.++|.++
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~-----s~G~~~~---~~~~~~~~~~~~~-----~~~~~~d~~f   68 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-----SAGKSLK---FKDQDITIEETTE-----TAFEGVDIAL   68 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGG-----GTTCEEE---ETTEEEEEEECCT-----TTTTTCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccc-----ccccccc---ccCCcccccccch-----hhhhhhhhhh
Confidence            37999999999999999999887643   33333221     1110000   0111111222222     2355789999


Q ss_pred             EcCCCccchhHHHHHHHHHHhC
Q 044721           82 STVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      .+++..   ....+.....+.+
T Consensus        69 ~~~~~~---~s~~~~~~~~~~~   87 (154)
T d2gz1a1          69 FSAGSS---TSAKYAPYAVKAG   87 (154)
T ss_dssp             ECSCHH---HHHHHHHHHHHTT
T ss_pred             hccCcc---chhhHHhhhcccc
Confidence            888753   3445566666665

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.63  E-value=0.0046  Score=44.65  Aligned_cols=76  Identities=16%  Similarity=0.192  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--CcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--QVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   80 (263)
                      +.+++|.|+ |.+|...++.+...|. .|++++++     +++.+....+.  ..+++.-+-.+.+.+.+...  ++|++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~-----~~k~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK-----EEKLKLAERLG--ADHVVDARRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS-----HHHHHHHHHTT--CSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch-----hHHHHHHhhcc--cceeecCcccHHHHHHHhhCCCCceEE
Confidence            568999985 9999999999988886 56667777     66666555542  12333222112233333333  69999


Q ss_pred             EEcCCCc
Q 044721           81 ISTVGHT   87 (263)
Q Consensus        81 v~~a~~~   87 (263)
                      |.++|..
T Consensus       105 id~~g~~  111 (172)
T d1h2ba2         105 MDFVGSQ  111 (172)
T ss_dssp             EESSCCH
T ss_pred             EEecCcc
Confidence            9999964

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.61  E-value=0.0013  Score=48.98  Aligned_cols=71  Identities=17%  Similarity=0.205  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~v   80 (263)
                      .++++++|-| .|.+|+++++.|.+.|++|++.+.+     ..+......   .+...+     +.   ++++. .+|++
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d-----~~~~~~~~~---~g~~~~-----~~---~~~~~~~~DI~   87 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD-----TERVAHAVA---LGHTAV-----AL---EDVLSTPCDVF   87 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTCEEC-----CG---GGGGGCCCSEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch-----HHHHHHHHh---hccccc-----Cc---cccccccceee
Confidence            3678999999 7999999999999999999988877     444332222   222222     22   23444 79999


Q ss_pred             EEcCCCccc
Q 044721           81 ISTVGHTLL   89 (263)
Q Consensus        81 v~~a~~~~~   89 (263)
                      +-||-...+
T Consensus        88 iPcA~~~~I   96 (201)
T d1c1da1          88 APCAMGGVI   96 (201)
T ss_dssp             EECSCSCCB
T ss_pred             ecccccccc
Confidence            999865543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.54  E-value=0.0016  Score=49.91  Aligned_cols=34  Identities=21%  Similarity=0.418  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .++|+|.|| |..|...+..|+++|++|+++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            578999996 9999999999999999999999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.53  E-value=0.0014  Score=48.45  Aligned_cols=80  Identities=14%  Similarity=0.264  Sum_probs=48.7

Q ss_pred             CCeEEE-EcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcE-EEEc---cCCCH-HHHHHHh---
Q 044721            4 KSKILF-IGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVN-LVIG---DVLNH-ESLVKAI---   74 (263)
Q Consensus         4 ~~~ilV-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~---D~~~~-~~~~~~~---   74 (263)
                      +.+++| +||+|.+|...++.....|++|+++.|+.... +++.+.+.++   +.. ++.-   |..+. +.+.+..   
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~-~~~~~~~~~l---Gad~vi~~~~~~~~~~~~~v~~~~~~~  104 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL-DEVVASLKEL---GATQVITEDQNNSREFGPTIKEWIKQS  104 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH-HHHHHHHHHH---TCSEEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc-chHHhhhhhc---cccEEEeccccchhHHHHHHHHHHhhc
Confidence            455666 69999999999999888999999999875322 1222223333   222 2221   22221 2233332   


Q ss_pred             -cCcCEEEEcCCCc
Q 044721           75 -KQVDVVISTVGHT   87 (263)
Q Consensus        75 -~~~d~vv~~a~~~   87 (263)
                       .++|+++.+.|..
T Consensus       105 g~~vdvv~D~vg~~  118 (189)
T d1gu7a2         105 GGEAKLALNCVGGK  118 (189)
T ss_dssp             TCCEEEEEESSCHH
T ss_pred             cCCceEEEECCCcc
Confidence             3699999998844

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.49  E-value=0.0015  Score=48.59  Aligned_cols=66  Identities=21%  Similarity=0.166  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|++.++...     ....     .        +....++++++++.+|+|+.
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~-----~~~~-----~--------~~~~~~~l~~~l~~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN-----PELE-----K--------KGYYVDSLDDLYKQADVISL  102 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC-----HHHH-----H--------TTCBCSCHHHHHHHCSEEEE
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccc-----cccc-----c--------ceeeeccccccccccccccc
Confidence            468999999 699999999999999999998876521     1110     0        01122456777888898888


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +....
T Consensus       103 ~~plt  107 (197)
T d1j4aa1         103 HVPDV  107 (197)
T ss_dssp             CSCCC
T ss_pred             cCCcc
Confidence            77654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.00053  Score=49.42  Aligned_cols=96  Identities=20%  Similarity=0.220  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +.++|+|.|++|.+|+.+++.+.+. +.+++.. +|............+......++ .+..|      ++..++.+|++
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~-~~~~~------~~~~~~~~DVi   75 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV-TVQSS------LDAVKDDFDVF   75 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSC-CEESC------STTTTTSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCc-eeecc------HHHHhcccceE
Confidence            4578999999999999999999886 5565443 34322110000000000001111 11222      23456688999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      |-...+   ......++.+.+.+ ++.++
T Consensus        76 IDFs~p---~~~~~~~~~a~~~~-~~~Vi  100 (162)
T d1diha1          76 IDFTRP---EGTLNHLAFCRQHG-KGMVI  100 (162)
T ss_dssp             EECSCH---HHHHHHHHHHHHTT-CEEEE
T ss_pred             EEeccH---HHHHHHHHHHHhcc-ceeEE
Confidence            887554   45677788888887 55544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.47  E-value=0.0036  Score=46.32  Aligned_cols=75  Identities=19%  Similarity=0.256  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCH---HHHHHHhc--C
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNH---ESLVKAIK--Q   76 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~   76 (263)
                      .+.+++|.|+ |.+|...+..+...|. +|++++++     +++++....+   +...+. |..+.   +.+.++..  +
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~-----~~rl~~a~~~---Ga~~~~-~~~~~~~~~~i~~~t~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN-----PARLAHAKAQ---GFEIAD-LSLDTPLHEQIAALLGEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHT---TCEEEE-TTSSSCHHHHHHHHHSSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc-----chhhHhhhhc---cccEEE-eCCCcCHHHHHHHHhCCCC
Confidence            4678999985 9999888888877886 67787887     6676655554   344332 33332   34445444  6


Q ss_pred             cCEEEEcCCCc
Q 044721           77 VDVVISTVGHT   87 (263)
Q Consensus        77 ~d~vv~~a~~~   87 (263)
                      +|++|.+.|..
T Consensus        95 ~D~vid~vG~~  105 (195)
T d1kola2          95 VDCAVDAVGFE  105 (195)
T ss_dssp             EEEEEECCCTT
T ss_pred             cEEEEECcccc
Confidence            89999998854

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.47  E-value=0.013  Score=41.13  Aligned_cols=34  Identities=18%  Similarity=0.297  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC--CCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA--GHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   37 (263)
                      +|+|.|.|+||-||....+-+.+.  .++|.+++-+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            689999999999999999999875  4788887755

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.47  E-value=9.5e-05  Score=54.42  Aligned_cols=33  Identities=15%  Similarity=0.222  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|+++|.|+ |+.+++++..|.+.| +|+++.|+
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~   49 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRT   49 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhh
Confidence            5789999995 999999999998776 89999998

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.42  E-value=0.00066  Score=50.43  Aligned_cols=68  Identities=13%  Similarity=0.109  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|...++.....   ...   .          .++...++++++++.+|+|+.
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~---~----------~~~~~~~~l~~ll~~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDG---VER---A----------LGLQRVSTLQDLLFHSDCVTL  110 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTT---HHH---H----------HTCEECSSHHHHHHHCSEEEE
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCccccc---chh---h----------hccccccchhhccccCCEEEE
Confidence            478999999 69999999999999999999988764321   110   0          011112355666777777766


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +....
T Consensus       111 ~~plt  115 (193)
T d1mx3a1         111 HCGLN  115 (193)
T ss_dssp             CCCCC
T ss_pred             eeccc
Confidence            66544

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.38  E-value=0.017  Score=41.50  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=50.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      |++.++.|.| +|.+|+..++.|.+. +.+++.+ +|+...     .        .......     ..+...+.+++|+
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~-----~--------~~~~~~~-----~~~~~~~~~~~D~   61 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL-----D--------TKTPVFD-----VADVDKHADDVDV   61 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC-----S--------SSSCEEE-----GGGGGGTTTTCSE
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc-----c--------ccccccc-----chhhhhhccccce
Confidence            4567899999 699999999999875 4666554 444221     1        0111111     1122334568999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhC
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ++.+.+..   ....++..+.++|
T Consensus        62 Vvi~tp~~---~h~~~a~~aL~aG   82 (170)
T d1f06a1          62 LFLCMGSA---TDIPEQAPKFAQF   82 (170)
T ss_dssp             EEECSCTT---THHHHHHHHHTTT
T ss_pred             EEEeCCCc---ccHHHHHHHHHCC
Confidence            99887765   3456677777777

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.38  E-value=0.012  Score=42.46  Aligned_cols=75  Identities=15%  Similarity=0.076  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCC--C--HHHHHHHh--c
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVL--N--HESLVKAI--K   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~--~~~~~~~~--~   75 (263)
                      .+.+++|.|+ |.+|...++.+...|+ +|++++++     +++++....+   +...+ .|..  |  .+......  .
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~-----~~kl~~a~~l---Ga~~~-i~~~~~d~~~~~~~~~~~~~   96 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTH-----KDKFPKAIEL---GATEC-LNPKDYDKPIYEVICEKTNG   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHT---TCSEE-ECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCCh-----HHHHHHHHHc---CCcEE-EcCCCchhHHHHHHHHhcCC
Confidence            3578999995 9999999999999996 58888888     6677665555   22222 2332  2  22333333  2


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|++|.+.|..
T Consensus        97 G~d~vid~~g~~  108 (174)
T d1p0fa2          97 GVDYAVECAGRI  108 (174)
T ss_dssp             CBSEEEECSCCH
T ss_pred             CCcEEEEcCCCc
Confidence            799999999864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.35  E-value=0.0034  Score=42.65  Aligned_cols=36  Identities=25%  Similarity=0.466  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      ..++++|.|| |++|-.++..|.++|.+|+++.|.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3578999995 99999999999999999999998853

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.34  E-value=0.0029  Score=42.65  Aligned_cols=34  Identities=29%  Similarity=0.463  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |++|..++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478999996 9999999999999999999999884

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.30  E-value=0.021  Score=41.15  Aligned_cols=98  Identities=20%  Similarity=0.252  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC-----------HHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN-----------HESLV   71 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----------~~~~~   71 (263)
                      .++|.|-| .|.||+.+++.|.++. .+++.+.-...   ......   +...+...+..+...           ...+.
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~---~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP---DFEAYR---AKELGIPVYAASEEFIPRFEKEGFEVAGTLN   74 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC---SHHHHH---HHHTTCCEEESSGGGHHHHHHHTCCCSCBHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC---hHHHHH---hhhcCceeecccccceeeecccCccccchhh
Confidence            46899999 6999999999998764 45554432211   111111   111122233222221           22344


Q ss_pred             HHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           72 KAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      .++.++|+|+-|.|...   +..-++.-.++| +++++.|.
T Consensus        75 ~~~~~vDvViEcTG~f~---~~~~~~~hl~~G-~k~Vi~s~  111 (172)
T d2czca2          75 DLLEKVDIIVDATPGGI---GAKNKPLYEKAG-VKAIFQGG  111 (172)
T ss_dssp             HHHTTCSEEEECCSTTH---HHHHHHHHHHHT-CEEEECTT
T ss_pred             hhhccCCEEEECCCCCC---CHHHHHHHHHcC-CCEEEECC
Confidence            55668999999999763   334445556788 88888653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.0055  Score=44.12  Aligned_cols=36  Identities=6%  Similarity=0.072  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ..+|+++|.|.|.-+|+.++..|+++|++|+++...
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~   72 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK   72 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEecc
Confidence            358999999999999999999999999999987665

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.20  E-value=0.008  Score=43.62  Aligned_cols=79  Identities=13%  Similarity=0.180  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEE-------E----------ccC--
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLV-------I----------GDV--   64 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~----------~D~--   64 (263)
                      +-+++|.|| |-.|..-++.....|+.|.+++.+     ..+.+.++.+....+...       +          -++  
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~-----~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~  102 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVR-----AATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK  102 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----STTHHHHHHTTCEECCC-----------------------C
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHH
Confidence            348999996 999999999999999999999998     445554444422111100       0          011  


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCCcc
Q 044721           65 LNHESLVKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~~~   88 (263)
                      ...+.+.+.++++|+||-.+-...
T Consensus       103 ~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         103 KQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             CHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHhhhhheeeeecCC
Confidence            124566777889999999987664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.20  E-value=0.0039  Score=42.45  Aligned_cols=34  Identities=35%  Similarity=0.454  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            578999995 9999999999999999999998874

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.0034  Score=44.93  Aligned_cols=58  Identities=22%  Similarity=0.295  Sum_probs=44.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      ..+|+++|.|.|.-+|+.++..|.++|++|+++.....                             .+.+..++.|++|
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-----------------------------~l~~~~~~ADivI   85 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-----------------------------NLRHHVENADLLI   85 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-----------------------------CHHHHHHHCSEEE
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhccccccccccc-----------------------------hhHHHHhhhhHhh
Confidence            35899999999999999999999999999987654411                             1233445688888


Q ss_pred             EcCCCcc
Q 044721           82 STVGHTL   88 (263)
Q Consensus        82 ~~a~~~~   88 (263)
                      ..+|...
T Consensus        86 ~a~G~p~   92 (166)
T d1b0aa1          86 VAVGKPG   92 (166)
T ss_dssp             ECSCCTT
T ss_pred             hhccCcc
Confidence            8888654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.18  E-value=0.0033  Score=42.80  Aligned_cols=34  Identities=24%  Similarity=0.357  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |+||..++..|.+.|.+|+++.|++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            578999995 9999999999999999999999874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.17  E-value=0.0088  Score=44.00  Aligned_cols=35  Identities=11%  Similarity=0.095  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|...++..
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccc
Confidence            468999999 59999999999999999999888764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.15  E-value=0.013  Score=40.48  Aligned_cols=29  Identities=21%  Similarity=0.282  Sum_probs=24.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCCEEEE
Q 044721            6 KILFIGGTGYIGKFIVEASVKA-GHPTFVL   34 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~   34 (263)
                      ||.|.|++|..|+.+++.+.+. ++++...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            6899999999999999998875 4666543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.09  E-value=0.0041  Score=42.27  Aligned_cols=33  Identities=24%  Similarity=0.313  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999996 999999999999999999999876

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.0039  Score=41.94  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            478999995 9999999999999999999999874

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.04  E-value=0.0047  Score=41.76  Aligned_cols=34  Identities=26%  Similarity=0.269  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |+||-.++..|.+.|.+|+++.|..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            578999995 9999999999999999999999885

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.02  E-value=0.0051  Score=45.20  Aligned_cols=69  Identities=12%  Similarity=0.055  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|...+|.....   ...  ...          .+....+++++++.+|+|+.
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~--~~~----------~~~~~~~l~~~l~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPE---SVE--KEL----------NLTWHATREDMYPVCDVVTL  106 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCH---HHH--HHH----------TCEECSSHHHHGGGCSEEEE
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccc---ccc--ccc----------cccccCCHHHHHHhccchhh
Confidence            467899999 69999999999999999999988864221   110  000          11123455667777887766


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +....
T Consensus       107 ~~plt  111 (188)
T d2naca1         107 NCPLH  111 (188)
T ss_dssp             CSCCC
T ss_pred             ccccc
Confidence            66544

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0047  Score=45.42  Aligned_cols=65  Identities=22%  Similarity=0.189  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|...++......            ...  .     ..++++++++..|+|+.
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~------------~~~--~-----~~~~l~ell~~sDii~i  102 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL------------GNA--T-----QVQHLSDLLNMSDVVSL  102 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC------------TTC--E-----ECSCHHHHHHHCSEEEE
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchh------------hhh--h-----hhhhHHHHHhhccceee
Confidence            467899998 699999999999999999999887632110            000  0     11256677778888877


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       103 ~~plt  107 (188)
T d1sc6a1         103 HVPEN  107 (188)
T ss_dssp             CCCSS
T ss_pred             cccCC
Confidence            76655

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.99  E-value=0.004  Score=42.00  Aligned_cols=34  Identities=24%  Similarity=0.516  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .++++|.|| |++|-.++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            578999996 9999999999999999999999874

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.99  E-value=0.0045  Score=45.97  Aligned_cols=65  Identities=22%  Similarity=0.179  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|++.++......           ....     +   ..+++++++.+|+|+.
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------~~~~-----~---~~~l~~l~~~~D~v~~  103 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-----------HPDF-----D---YVSLEDLFKQSDVIDL  103 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC-----------CTTC-----E---ECCHHHHHHHCSEEEE
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchhh-----------hcch-----h---HHHHHHHHHhccccee
Confidence            368999999 699999999999999999999887643210           0111     1   1245667777888877


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +....
T Consensus       104 ~~plt  108 (199)
T d1dxya1         104 HVPGI  108 (199)
T ss_dssp             CCCCC
T ss_pred             eeccc
Confidence            76654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.90  E-value=0.0035  Score=44.34  Aligned_cols=66  Identities=26%  Similarity=0.421  Sum_probs=45.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |+|.+.|+ |.+|+++++.|++.| ++|.+.+|+     +++.+.+...  .++... .|..       .++++|+||-+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~-----~~~~~~l~~~--~~~~~~-~~~~-------~v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRG-----AEKRERLEKE--LGVETS-ATLP-------ELHSDDVLILA   64 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSS-----HHHHHHHHHH--TCCEEE-SSCC-------CCCTTSEEEEC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCC-----hhHHHHhhhh--cccccc-cccc-------cccccceEEEe
Confidence            68999995 999999999999887 899999998     5554433221  123322 2221       24568999887


Q ss_pred             CCC
Q 044721           84 VGH   86 (263)
Q Consensus        84 a~~   86 (263)
                      .-+
T Consensus        65 vkP   67 (152)
T d1yqga2          65 VKP   67 (152)
T ss_dssp             SCH
T ss_pred             cCH
Confidence            653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.005  Score=42.00  Aligned_cols=34  Identities=21%  Similarity=0.414  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |+||-.++..|.+.|.+|+++.|+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478999996 9999999999999999999999984

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.85  E-value=0.034  Score=39.91  Aligned_cols=97  Identities=19%  Similarity=0.276  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEcc-----------CCCHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGD-----------VLNHESLV   71 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----------~~~~~~~~   71 (263)
                      |++|.|-| .|.||+.+++.|.+++ .+|+.+.....   ......+.   ..+......+           +.-...+.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~---~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRP---DFEARMAL---KKGYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSC---SHHHHHHH---HTTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCc---HHHHHHHH---hcCCceEecccccceeecccCcccCCChh
Confidence            57899998 7999999999998876 45554443211   11111111   1111121111           11111344


Q ss_pred             HHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           72 KAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        72 ~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      .+++++|+|+-|.|...   .+.-++.-.++| +|.++.+
T Consensus        74 ~~~~~vDvViEcTG~f~---~~~~~~~hl~~G-~K~vi~~  109 (171)
T d1cf2o1          74 DMLDEADIVIDCTPEGI---GAKNLKMYKEKG-IKAIFQG  109 (171)
T ss_dssp             HHHHTCSEEEECCSTTH---HHHHHHHHHHTT-CEEEECT
T ss_pred             HhhcCCCEEEEccCCCC---CHHHHHHHHHcC-CCEEEEC
Confidence            55668999999999863   233345555678 8766653

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.038  Score=36.90  Aligned_cols=91  Identities=18%  Similarity=0.249  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCC----------ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHH
Q 044721            3 SKSKILFIGGT----------GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVK   72 (263)
Q Consensus         3 ~~~~ilVtGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (263)
                      ..+++||.|+.          -+-+.+.+++|.+.|++++++.-|+......         ..-..-+.+.....+.+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd---------~d~aD~lYfeplt~e~v~~   73 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD---------YDTSDRLYFEPVTLEDVLE   73 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS---------TTSSSEEECCCCSHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC---------hhhcCceEEccCCHHHHHH
Confidence            46899999973          3778899999999999999988885432111         1123445666777888888


Q ss_pred             Hhc--CcCEEEEcCCCccchhHHHHHHHHHHhCCcc
Q 044721           73 AIK--QVDVVISTVGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        73 ~~~--~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      .++  ++|.|+-..|.-   ...++...+.+.| ++
T Consensus        74 Ii~~E~p~~ii~~~GGQ---talnla~~L~~~g-v~  105 (121)
T d1a9xa4          74 IVRIEKPKGVIVQYGGQ---TPLKLARALEAAG-VP  105 (121)
T ss_dssp             HHHHHCCSEEECSSSTH---HHHTTHHHHHHTT-CC
T ss_pred             HHHHhCCCEEEeehhhh---hHHHHHHHHHHcC-Cc
Confidence            765  899988877643   3456677777777 65

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.80  E-value=0.0041  Score=43.90  Aligned_cols=34  Identities=24%  Similarity=0.406  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|++||.|| |.+|..-++.|++.|++|++++..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5799999997 999999999999999999998754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.80  E-value=0.0051  Score=41.25  Aligned_cols=34  Identities=29%  Similarity=0.429  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |++|-.++..|.+.|++|+++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            578999995 9999999999999999999998874

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.80  E-value=0.0053  Score=41.65  Aligned_cols=34  Identities=26%  Similarity=0.483  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .++++|.|| |++|-.++..|.+.|++|+++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            368999996 9999999999999999999998874

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.66  E-value=0.0079  Score=44.00  Aligned_cols=67  Identities=16%  Similarity=0.228  Sum_probs=46.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      .++++.|.| .|.||+.+++.|..-|.+|+..++...     .... ..   ..+.        ..+++++++.+|+|+.
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~-----~~~~-~~---~~~~--------~~~l~ell~~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS-----PARA-AQ---LGIE--------LLSLDDLLARADFISV  104 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC-----HHHH-HH---HTCE--------ECCHHHHHHHCSEEEE
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC-----hhHH-hh---cCce--------eccHHHHHhhCCEEEE
Confidence            467899999 699999999999999999998877632     1110 00   0111        1245677888898877


Q ss_pred             cCCCc
Q 044721           83 TVGHT   87 (263)
Q Consensus        83 ~a~~~   87 (263)
                      +.+..
T Consensus       105 ~~Plt  109 (184)
T d1ygya1         105 HLPKT  109 (184)
T ss_dssp             CCCCS
T ss_pred             cCCCC
Confidence            77655

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.66  E-value=0.024  Score=44.32  Aligned_cols=34  Identities=12%  Similarity=0.144  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++++++|-| .|.+|+++++.|.+.|++|+.++-+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            468999999 6999999999999999999887643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.66  E-value=0.008  Score=41.43  Aligned_cols=36  Identities=28%  Similarity=0.548  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      ..++++|.|| |++|-.++..|.+.|.+|+++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3678999995 99999999999999999999998753

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.65  E-value=0.037  Score=37.68  Aligned_cols=84  Identities=15%  Similarity=0.164  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCC---ChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcC
Q 044721            3 SKSKILFIGGT---GYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVD   78 (263)
Q Consensus         3 ~~~~ilVtGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   78 (263)
                      +.++|+|.|+|   +..|..+.+.|.+.| ++|+.+..+..     ..        .+.. ..-++.|.      =..+|
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~-----~i--------~G~~-~y~sl~dl------p~~vD   66 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEE-----EV--------QGVK-AYKSVKDI------PDEID   66 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCS-----EE--------TTEE-CBSSTTSC------SSCCS
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcc-----cc--------CCeE-eecchhhc------CCCCc
Confidence            56899999998   899999999988766 57776544311     00        0111 12233332      22689


Q ss_pred             EEEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           79 VVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        79 ~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      .++-+....   ....+++.+.+.| ++.+++
T Consensus        67 lvvi~vp~~---~~~~~~~~~~~~g-~~~~vi   94 (129)
T d2csua1          67 LAIIVVPKR---FVKDTLIQCGEKG-VKGVVI   94 (129)
T ss_dssp             EEEECSCHH---HHHHHHHHHHHHT-CCEEEE
T ss_pred             eEEEecChH---HhHHHHHHHHHcC-CCEEEE
Confidence            988887643   4556889999999 898764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.62  E-value=0.0076  Score=45.63  Aligned_cols=73  Identities=11%  Similarity=0.056  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEE
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVV   80 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~v   80 (263)
                      +++++++|-| .|.+|+++++.|.+.|++|++.+.+     ..........  .+...     .+++   +++. .||++
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~-----~~~~~~~~~~--~g~~~-----~~~~---~~~~~~cDIl  100 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN-----KAAVSAAVAE--EGADA-----VAPN---AIYGVTCDIF  100 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHH--HCCEE-----CCGG---GTTTCCCSEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc-----HHHHHHHHHh--cCCcc-----cCCc---ccccccccEe
Confidence            3578999999 6999999999999999999988776     3333322221  12222     1222   2333 79999


Q ss_pred             EEcCCCccch
Q 044721           81 ISTVGHTLLG   90 (263)
Q Consensus        81 v~~a~~~~~~   90 (263)
                      +-||-...++
T Consensus       101 ~PcA~~~~I~  110 (230)
T d1leha1         101 APCALGAVLN  110 (230)
T ss_dssp             EECSCSCCBS
T ss_pred             cccccccccC
Confidence            9999766433

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.56  E-value=0.0054  Score=41.69  Aligned_cols=34  Identities=29%  Similarity=0.377  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |+||-.++..|.+.|.+|+++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            578999996 9999999999999999999999885

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.47  E-value=0.018  Score=41.39  Aligned_cols=75  Identities=20%  Similarity=0.232  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCC----HHHHHHHh--c
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLN----HESLVKAI--K   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~--~   75 (263)
                      .+.+++|.|+ |.+|...+..+...|. .|++++++     +++++...++   ++..+ .|..+    .+.+.+..  .
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~-----~~rl~~a~~~---GAd~~-in~~~~~~~~~~~~~~~~~~   97 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN-----PDKFEKAKVF---GATDF-VNPNDHSEPISQVLSKMTNG   97 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCCEE-ECGGGCSSCHHHHHHHHHTS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecch-----HHHHHHHHHc---CCcEE-EcCCCcchhHHHHHHhhccC
Confidence            3568999996 7788888888888876 57777777     6666655555   22222 23322    23333333  3


Q ss_pred             CcCEEEEcCCCc
Q 044721           76 QVDVVISTVGHT   87 (263)
Q Consensus        76 ~~d~vv~~a~~~   87 (263)
                      ++|+++.+.|..
T Consensus        98 G~d~vid~~G~~  109 (175)
T d1cdoa2          98 GVDFSLECVGNV  109 (175)
T ss_dssp             CBSEEEECSCCH
T ss_pred             CcceeeeecCCH
Confidence            799999999864

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.36  E-value=0.044  Score=39.54  Aligned_cols=96  Identities=16%  Similarity=0.225  Sum_probs=53.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhhhhhccCCcEEEE----------ccCCCHHHHHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVI----------GDVLNHESLVK   72 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~D~~~~~~~~~   72 (263)
                      |-||.|-| .|.||+.+++.|.+++ .+|+.+.....   ......+  + ......+.          ..+.-...+..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~---~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~   73 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSP---NYEAFIA--H-RRGIRIYVPQQSIKKFEESGIPVAGTVED   73 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSC---SHHHHHH--H-HTTCCEECCGGGHHHHHTTTCCCCCCHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCC---cHHHHHh--c-ccCcceeccCccceeccccceecCCchhh
Confidence            34899999 7999999999999875 56666543321   1111100  0 00111110          01111123344


Q ss_pred             HhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           73 AIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++.++|+|+-|.|...   .++-++...+.+ .|.++.
T Consensus        74 ~~~~vDiViecTG~f~---~~e~a~~hl~~G-~KvIi~  107 (178)
T d1b7go1          74 LIKTSDIVVDTTPNGV---GAQYKPIYLQLQ-RNAIFQ  107 (178)
T ss_dssp             HHHHCSEEEECCSTTH---HHHHHHHHHHTT-CEEEEC
T ss_pred             hhhcCCEEEECCCCcC---CHHHHHHHHHcC-CEEEEE
Confidence            5568999999999752   334455666777 655553

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.29  E-value=0.01  Score=43.18  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   38 (263)
                      ++||+|.|| |..|...+..|.+.|+ +|+++.|+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            689999996 9999999999999998 599998874

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.29  E-value=0.18  Score=37.98  Aligned_cols=102  Identities=16%  Similarity=0.164  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC--------------Ccchhhhhhh-h--ccCCcEEEEccCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQLLDH-F--KKLGVNLVIGDVL   65 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~-~--~~~~~~~~~~D~~   65 (263)
                      .++|+|.| .|++|+.++..|++.|. ++++++.+.-..              -..|.+.+.+ +  ..+.+.+...+..
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~  108 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  108 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhh
Confidence            46899999 59999999999999996 688877553110              0112221111 1  1345555444432


Q ss_pred             -CHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           66 -NHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        66 -~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                       +.......+...|+++.+....  .....+-+.+.+.+ ++.+.
T Consensus       109 ~~~~~~~~~~~~~divid~~d~~--~~~~~in~~~~~~~-ip~i~  150 (247)
T d1jw9b_         109 LDDAELAALIAEHDLVLDCTDNV--AVRNQLNAGCFAAK-VPLVS  150 (247)
T ss_dssp             CCHHHHHHHHHTSSEEEECCSSH--HHHHHHHHHHHHHT-CCEEE
T ss_pred             hhhccccccccccceeeeccchh--hhhhhHHHHHHHhC-CCccc
Confidence             4555667778999999886543  33445556777887 77665

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.25  E-value=0.014  Score=39.27  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            578999995 9999999999999999999999874

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.20  E-value=0.011  Score=40.27  Aligned_cols=34  Identities=29%  Similarity=0.330  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +++++|.|| |+||..++..|.+.|.+|+++.|.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            578999996 9999999999999999999998874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=95.17  E-value=0.051  Score=41.27  Aligned_cols=35  Identities=14%  Similarity=0.216  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            2 ASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      +++++++|-| .|.+|+++++.|.+.|++|+.++-.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            3578999999 7999999999999999999877643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.13  E-value=0.12  Score=32.48  Aligned_cols=84  Identities=21%  Similarity=0.254  Sum_probs=54.1

Q ss_pred             CeEEEEcCCChhHH-HHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEc
Q 044721            5 SKILFIGGTGYIGK-FIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIST   83 (263)
Q Consensus         5 ~~ilVtGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~   83 (263)
                      |+|-+.|- |++|- +|++.|.++|++|...++...    +..   +.+...++.+..+  .+++    .++++|.||..
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~----~~t---~~L~~~Gi~i~~g--h~~~----~i~~~d~vV~S   67 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET----ERT---AYLRKLGIPIFVP--HSAD----NWYDPDLVIKT   67 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC----HHH---HHHHHTTCCEESS--CCTT----SCCCCSEEEEC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC----hhH---HHHHHCCCeEEee--eccc----ccCCCCEEEEe
Confidence            67888885 66665 789999999999999987732    222   2233445655443  1222    23579999999


Q ss_pred             CCCccchhHHHHHHHHHHhCCcc
Q 044721           84 VGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        84 a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      .+...-.   .-+.++++.+ ++
T Consensus        68 sAI~~~n---pel~~A~~~g-Ip   86 (89)
T d1j6ua1          68 PAVRDDN---PEIVRARMER-VP   86 (89)
T ss_dssp             TTCCTTC---HHHHHHHHTT-CC
T ss_pred             cCcCCCC---HHHHHHHHcC-CC
Confidence            8876321   2356667776 54

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.04  E-value=0.011  Score=45.57  Aligned_cols=31  Identities=29%  Similarity=0.385  Sum_probs=29.1

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|| |-.|..++.+|+++|++|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999996 9999999999999999999999864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.02  E-value=0.015  Score=42.14  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|+|+|.|| |-.|...+..|+++||+|+++.+++
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            4689999995 9999999999999999999999874

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.01  E-value=0.012  Score=46.70  Aligned_cols=35  Identities=26%  Similarity=0.537  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|+|+|.|| |.-|..+|..|++.|++|.++.++.
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3689999995 9999999999999999999998774

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.011  Score=36.49  Aligned_cols=34  Identities=15%  Similarity=0.379  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +|+|.|.|+ |++|+-++.+-.+.|+++++++.++
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            478999995 9999999999999999999988764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.062  Score=36.25  Aligned_cols=74  Identities=19%  Similarity=0.219  Sum_probs=54.7

Q ss_pred             CCeEEEEcC----------CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH
Q 044721            4 KSKILFIGG----------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         4 ~~~ilVtGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      .++|||.|+          .-+-+.+.+++|.+.|++++++.-|+......         ..-...+.+.....+++.+.
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd---------~d~aD~lYfePlt~e~v~~I   77 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD---------PEMADATYIEPIHWEVVRKI   77 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC---------GGGSSEEECSCCCHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC---------hhhcceeeeecCCHHHHHHH
Confidence            479999998          34678899999999999999988885432110         01134456777788998888


Q ss_pred             hc--CcCEEEEcCCC
Q 044721           74 IK--QVDVVISTVGH   86 (263)
Q Consensus        74 ~~--~~d~vv~~a~~   86 (263)
                      ++  ++|.++-..|.
T Consensus        78 i~~E~pd~il~~~GG   92 (127)
T d1a9xa3          78 IEKERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHCCSEEECSSSH
T ss_pred             HHHhCcCCeEEEeee
Confidence            76  89999887764

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.87  E-value=0.035  Score=37.05  Aligned_cols=82  Identities=21%  Similarity=0.316  Sum_probs=54.7

Q ss_pred             CeEEEEcCC---ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEE
Q 044721            5 SKILFIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv   81 (263)
                      |+|.|.|+|   +..|..+.+.|.+.||+|+.+..+.     +..        .+...+ -++      .++=..+|.++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~-----~~i--------~G~~~y-~sl------~~lp~~~D~vv   61 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-----DEI--------EGLKCY-RSV------RELPKDVDVIV   61 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-----SEE--------TTEECB-SSG------GGSCTTCCEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccc-----ccc--------cCcccc-ccc------hhccccceEEE
Confidence            689999997   6799999999999999987654331     000        011111 122      22223689888


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      -+.+..   ....+++.+.+.| ++.+++
T Consensus        62 i~vp~~---~~~~~l~~~~~~g-~k~v~~   86 (116)
T d1y81a1          62 FVVPPK---VGLQVAKEAVEAG-FKKLWF   86 (116)
T ss_dssp             ECSCHH---HHHHHHHHHHHTT-CCEEEE
T ss_pred             EEeCHH---HHHHHHHHHHhcC-CceEEe
Confidence            776643   4556788888999 998875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.70  E-value=0.041  Score=37.99  Aligned_cols=83  Identities=14%  Similarity=0.185  Sum_probs=56.4

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            4 KSKILFIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      .++|+|.|+|   +..|..+++.|.+.||+|+.+..+..     .      .  .+... .-++      .++-..+|.+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~-----~------i--~G~~~-~~sl------~dlp~~iD~v   78 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE-----E------V--LGRKC-YPSV------LDIPDKIEVV   78 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----E------E--TTEEC-BSSG------GGCSSCCSEE
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc-----c------c--CCCcc-cccc------cccCccceEE
Confidence            5789999998   78999999999999999877643311     0      0  01111 1122      2222368988


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      +-+....   ....+++.+.+.+ ++.+++
T Consensus        79 ~i~vp~~---~~~~~~~e~~~~g-~k~v~~  104 (139)
T d2d59a1          79 DLFVKPK---LTMEYVEQAIKKG-AKVVWF  104 (139)
T ss_dssp             EECSCHH---HHHHHHHHHHHHT-CSEEEE
T ss_pred             EEEeCHH---HHHHHHHHHHHhC-CCEEEE
Confidence            8877643   4566788888889 898876

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=94.69  E-value=0.13  Score=39.13  Aligned_cols=33  Identities=12%  Similarity=0.120  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR   36 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   36 (263)
                      ++++++|-| .|.+|+++++.|.+.|++|+.++-
T Consensus        35 ~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            578999999 699999999999999999887764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.63  E-value=0.014  Score=45.18  Aligned_cols=34  Identities=21%  Similarity=0.192  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +|||+|.|| |.-|...+.+|++.|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            489999995 9999999999999999999998763

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.62  E-value=0.019  Score=43.66  Aligned_cols=35  Identities=23%  Similarity=0.240  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +.+||+|.|| |-.|..++..|+++|++|+++.|++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4679999996 9999999999999999999999874

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.60  E-value=0.017  Score=46.02  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRES   38 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~   38 (263)
                      |..+|+|+|.|| |.-|..++..|+++|  ++|+++.|+.
T Consensus         1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            677899999996 999999999999877  5899998884

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.55  E-value=0.077  Score=37.93  Aligned_cols=89  Identities=18%  Similarity=0.133  Sum_probs=52.2

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHHC----CCCEEEEEcCCCCCCcchhhhh----hhh---ccCCcEEEEccCCCHHHH
Q 044721            4 KSKILFIGGTGYIGKF--IVEASVKA----GHPTFVLVRESTLSAPSKSQLL----DHF---KKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~----~~~---~~~~~~~~~~D~~~~~~~   70 (263)
                      .|||.|.|| |.+|..  +...|+..    +.++++++++     +++.+..    .+.   ......+.     ...+.
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~i~-----~~td~   70 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDID-----EERLDAILTIAKKYVEEVGADLKFE-----KTMNL   70 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSC-----HHHHHHHHHHHHHHHHHTTCCCEEE-----EESCH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCCeEEE-----EeCCh
Confidence            579999996 888865  34445542    3589999998     4443321    111   11122221     12335


Q ss_pred             HHHhcCcCEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           71 VKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +++++++|++++.++........+.-....+.+
T Consensus        71 ~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g  103 (171)
T d1obba1          71 DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYG  103 (171)
T ss_dssp             HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTT
T ss_pred             hhcccCCCeEeeecccccccceeeehhcchhhh
Confidence            678899999999999876544333333334444

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.51  E-value=0.5  Score=33.56  Aligned_cols=89  Identities=16%  Similarity=0.138  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcCCChhHHH-HHHHHHHCC--CCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc--
Q 044721            2 ASKSKILFIGGTGYIGKF-IVEASVKAG--HPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         2 ~~~~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      |++.++.|.| +|.+|+. .++.+.+.+  .+++.+ +++     +++.+......  +...+.   .|   ++++++  
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~-----~~~~~~~~~~~--~~~~~~---~~---~~ell~~~   66 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRT-----RSHAEEFAKMV--GNPAVF---DS---YEELLESG   66 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSS-----HHHHHHHHHHH--SSCEEE---SC---HHHHHHSS
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEecc-----Hhhhhhhhccc--ccccee---ee---eecccccc
Confidence            4556899999 6999987 467777644  456644 455     43433222111  111222   23   345554  


Q ss_pred             CcCEEEEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           76 QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        76 ~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      ++|+++-+....   .+..++..+.++|  ++++
T Consensus        67 ~id~v~I~tp~~---~h~~~~~~al~~g--k~V~   95 (181)
T d1zh8a1          67 LVDAVDLTLPVE---LNLPFIEKALRKG--VHVI   95 (181)
T ss_dssp             CCSEEEECCCGG---GHHHHHHHHHHTT--CEEE
T ss_pred             ccceeecccccc---ccccccccccccc--hhhh
Confidence            689998776543   4567778888887  4444

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=94.49  E-value=0.18  Score=35.99  Aligned_cols=102  Identities=22%  Similarity=0.261  Sum_probs=54.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCCCCCCcchhhhhhhhc------cCCcE------------EEEccC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK------KLGVN------------LVIGDV   64 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~------------~~~~D~   64 (263)
                      ++|.|-| -|.||+.+.+.+++++  ..+-++..+.... .+....+=...      ...+.            +....-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~-~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~   79 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGD-PKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN   79 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSC-HHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCC-hHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEec
Confidence            5789999 7999999999999754  2444444443211 22211110000      01111            111122


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           65 LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      .|++.+.=.--++|+|+-|.|....   +.-++.-.+.| ++++++|.
T Consensus        80 ~~p~~i~W~~~gvDiViEcTG~f~~---~~~a~~hl~~G-akkViiSA  123 (173)
T d1obfo1          80 RNPAQLPWGALKVDVVLECTGFFTT---KEKAGAHIKGG-AKKVIISA  123 (173)
T ss_dssp             SCGGGSCTTTTTCSEEEECSSSCCS---HHHHHHHHHHT-CSEEEESS
T ss_pred             CCHHHCcccccccceEEEecccccC---HHHHHHHhccC-CcceEEec
Confidence            3444332112379999999997642   22233334568 99999763

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.34  E-value=0.028  Score=39.52  Aligned_cols=35  Identities=14%  Similarity=0.302  Sum_probs=28.9

Q ss_pred             CCeEEEE-cCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFI-GGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++.++|. .+.|+||..++..|++.|++|+++.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            3456665 2459999999999999999999999874

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.28  E-value=0.14  Score=35.71  Aligned_cols=31  Identities=26%  Similarity=0.269  Sum_probs=25.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ||.+.| .|.+|+.+++.|++.|+.+ +..|+.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTF   32 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSST
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCH
Confidence            688999 5999999999999988765 456663

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.26  E-value=0.037  Score=41.85  Aligned_cols=33  Identities=18%  Similarity=0.322  Sum_probs=28.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEc
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVK-AGHPTFVLVR   36 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r   36 (263)
                      ++++++|-| .|.+|+++++.|.+ .|..|+.++-
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            578999998 79999999999975 5999887763

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.19  E-value=0.08  Score=37.26  Aligned_cols=76  Identities=21%  Similarity=0.275  Sum_probs=42.5

Q ss_pred             CCCCCeEEEEcCCChhHHHH-HHHHHHCC-CCEEEE-EcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHH--hc
Q 044721            1 MASKSKILFIGGTGYIGKFI-VEASVKAG-HPTFVL-VRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKA--IK   75 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l-~~~L~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~   75 (263)
                      |.++.++.|.| +|++|+.+ .+.|.+.. .+++++ +|+...   ......+.   .++...   ....+++.+.  +.
T Consensus         1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~---~~~~~a~~---~~i~~~---~~~~d~l~~~~~~~   70 (157)
T d1nvmb1           1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS---DGLARAQR---MGVTTT---YAGVEGLIKLPEFA   70 (157)
T ss_dssp             CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTC---HHHHHHHH---TTCCEE---SSHHHHHHHSGGGG
T ss_pred             CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhc---cchhhhhh---cCCccc---ccceeeeeeccccc
Confidence            66778999999 89999865 45554433 466655 455321   11111111   123322   2233444443  45


Q ss_pred             CcCEEEEcCCC
Q 044721           76 QVDVVISTVGH   86 (263)
Q Consensus        76 ~~d~vv~~a~~   86 (263)
                      ++|++|.+...
T Consensus        71 ~iDiVf~ATpa   81 (157)
T d1nvmb1          71 DIDFVFDATSA   81 (157)
T ss_dssp             GEEEEEECSCH
T ss_pred             ccCEEEEcCCc
Confidence            79999987653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.07  E-value=0.027  Score=40.04  Aligned_cols=35  Identities=17%  Similarity=0.231  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCC--CEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGH--PTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~   38 (263)
                      .+|+|+|.|| |++|-.++..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999996 9999999999999885  677777664

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.02  E-value=0.022  Score=43.92  Aligned_cols=33  Identities=18%  Similarity=0.340  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|+|.|| |.-|...+.+|+++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999996 9999999999999999999998763

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.95  E-value=0.02  Score=41.96  Aligned_cols=31  Identities=19%  Similarity=0.203  Sum_probs=26.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |+|.|.| .|++|..++..| ++|++|++.+-+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din   31 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL   31 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence            6899998 799999999755 579999999988

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.93  E-value=0.023  Score=44.57  Aligned_cols=35  Identities=23%  Similarity=0.343  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +.|+|+|.|| |-.|...+..|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3579999995 9999999999999999999998763

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.81  E-value=0.0049  Score=44.15  Aligned_cols=73  Identities=15%  Similarity=0.106  Sum_probs=44.1

Q ss_pred             CeEEEEcCCChhHHHHHHH-HHHC-----CCCEEEEEcCCCCCCcchhhhhhh----hccCCcEEEEccCCCHHHHHHHh
Q 044721            5 SKILFIGGTGYIGKFIVEA-SVKA-----GHPTFVLVRESTLSAPSKSQLLDH----FKKLGVNLVIGDVLNHESLVKAI   74 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~-L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~   74 (263)
                      |||.|.|| |.+|...+-. |++.     +.++++++.+     +++.+....    ..........   +  .+.++.+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did-----~~k~~~~~d~~~~~~~~~~~~~~---t--~~~~~~l   69 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDID-----EEKQKIVVDFVKRLVKDRFKVLI---S--DTFEGAV   69 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSC-----HHHHHHHHHHHHHHHTTSSEEEE---C--SSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecC-----cHHHHHHHHHHHhhhccCceEEE---e--cCccccc
Confidence            68999997 6577666543 3321     3579999988     444432221    1122233222   1  1235678


Q ss_pred             cCcCEEEEcCCCcc
Q 044721           75 KQVDVVISTVGHTL   88 (263)
Q Consensus        75 ~~~d~vv~~a~~~~   88 (263)
                      +++|+||..++...
T Consensus        70 ~~aDvVVita~~~~   83 (162)
T d1up7a1          70 VDAKYVIFQFRPGG   83 (162)
T ss_dssp             TTCSEEEECCCTTH
T ss_pred             CCCCEEEEecccCC
Confidence            89999999999875

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.54  E-value=0.18  Score=38.07  Aligned_cols=34  Identities=15%  Similarity=0.268  Sum_probs=28.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKA-GHPTFVLVRE   37 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~   37 (263)
                      ++++++|-| .|.+|+++++.|.++ |..|+.++-.
T Consensus        31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            578999999 599999999999865 8888776543

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=93.50  E-value=0.2  Score=35.56  Aligned_cols=99  Identities=16%  Similarity=0.098  Sum_probs=52.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC---CCEEEEEcCCCCCCcchhhh-hhh--hc---cCCcE------------EEEccC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQL-LDH--FK---KLGVN------------LVIGDV   64 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-~~~--~~---~~~~~------------~~~~D~   64 (263)
                      +|.|-| .|.||+.+.+.++++.   .+|+.+. +...  .+.... ++.  .-   ...+.            +....-
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaIN-d~~~--~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~   77 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIN-DLTD--TKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAE   77 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEE-CSSC--HHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECC
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEec-cCcc--HHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeC
Confidence            678888 7999999999998753   4454432 2111  222211 100  00   01111            111222


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           65 LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      .+++++.=.=.++|+|+-|.|....   ..-++.-.+.| ++++++|.
T Consensus        78 ~~p~~i~W~~~gvD~ViEcTG~f~t---~~~~~~hl~~G-akkViiSA  121 (169)
T d1hdgo1          78 PDPSKLPWKDLGVDFVIESTGVFRN---REKAELHLQAG-AKKVIITA  121 (169)
T ss_dssp             SSGGGSCHHHHTCCEEEECSSSCCB---HHHHTHHHHTT-CSEEEESS
T ss_pred             CChhhCCccccCCCEEEEecceecc---ccchhhhccCC-CceEEEec
Confidence            3444432111279999999998742   22233344568 99998764

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=93.48  E-value=0.32  Score=34.55  Aligned_cols=102  Identities=19%  Similarity=0.114  Sum_probs=52.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhh-hhh--h----c------cCCc------EEEEccC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL-LDH--F----K------KLGV------NLVIGDV   64 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~--~----~------~~~~------~~~~~D~   64 (263)
                      ++|.|-| -|.||+.+.+.++++. .++-++.-+.... .+.... ++.  .    .      +...      .+....-
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~-~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~   78 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGG-VKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD   78 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTC-HHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCC-HHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecC
Confidence            4788999 7999999999988754 2333333332211 111111 100  0    0      0000      1111122


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           65 LNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      .+++++.=.=.++|+|+-|.|.....   .-++.-.+.| ++++++|.
T Consensus        79 ~~p~~i~W~~~gvDiViEcTG~f~~~---~~~~~hl~~G-akkViiSA  122 (172)
T d1rm4a1          79 RNPVNLPWGDMGIDLVIEGTGVFVDR---DGAGKHLQAG-AKKVLITA  122 (172)
T ss_dssp             SCGGGSCHHHHTCCEEEECSSSCCBH---HHHHHHHHTT-CSCEEESS
T ss_pred             CChHHCChhhcCCCEEEecCceEccH---HHHHHHHhcC-CceEEeec
Confidence            34443211112799999999987422   2233334568 99998764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.39  E-value=0.052  Score=40.75  Aligned_cols=35  Identities=17%  Similarity=0.298  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +.++|+|.|| |..|...+..|+++|++|+++.++.
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            4579999996 9999999999999999999998764

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.26  E-value=0.33  Score=34.00  Aligned_cols=84  Identities=20%  Similarity=0.176  Sum_probs=49.5

Q ss_pred             CeEEEEcCCChhHHH-HHHHHHHC-CCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh-cCcCEEE
Q 044721            5 SKILFIGGTGYIGKF-IVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI-KQVDVVI   81 (263)
Q Consensus         5 ~~ilVtGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vv   81 (263)
                      +++.|.| .|.+|+. ..+.|.+. +.++++++++     +++.+......  +...+..|+   +   +++ .++|+|+
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~-----~~~~~~~~~~~--~~~~~~~~~---~---~ll~~~iD~V~   67 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRN-----PKVLGTLATRY--RVSATCTDY---R---DVLQYGVDAVM   67 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSC-----HHHHHHHHHHT--TCCCCCSST---T---GGGGGCCSEEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECC-----HHHHHHHHHhc--ccccccccH---H---Hhcccccceec
Confidence            5899999 5899976 56666655 3577766666     44443322211  111122233   2   233 3789988


Q ss_pred             EcCCCccchhHHHHHHHHHHhCCcc
Q 044721           82 STVGHTLLGDQVKIIAAIKEAGNIK  106 (263)
Q Consensus        82 ~~a~~~~~~~~~~l~~~~~~~~~~~  106 (263)
                      -+....   .+..++..+.+.| ..
T Consensus        68 I~tp~~---~H~~~~~~al~~g-k~   88 (167)
T d1xeaa1          68 IHAATD---VHSTLAAFFLHLG-IP   88 (167)
T ss_dssp             ECSCGG---GHHHHHHHHHHTT-CC
T ss_pred             cccccc---ccccccccccccc-cc
Confidence            776543   4567778888887 44

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=93.15  E-value=0.043  Score=42.18  Aligned_cols=31  Identities=19%  Similarity=0.276  Sum_probs=28.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ++|.|| |..|..++.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            789995 9999999999999999999999863

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.02  E-value=0.028  Score=40.24  Aligned_cols=89  Identities=16%  Similarity=0.103  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCChhHHH-HHHHHHHC-----CCCEEEEEcCCCCCCcchhhh----hhhh---ccCCcEEEEccCCCHHHH
Q 044721            4 KSKILFIGGTGYIGKF-IVEASVKA-----GHPTFVLVRESTLSAPSKSQL----LDHF---KKLGVNLVIGDVLNHESL   70 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~----~~~~---~~~~~~~~~~D~~~~~~~   70 (263)
                      ..||.|.|| |.+|.. ++..|+..     +.++++++.+     +++++.    ++..   .........     ..+.
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~   71 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDND-----KERQDRIAGACDVFIREKAPDIEFAA-----TTDP   71 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSC-----HHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCH
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCC-----hhHHHHHHHHHHHHHHHhCCCcceEe-----cCCh
Confidence            357999998 555554 44444442     1379999988     444431    1111   112222221     1234


Q ss_pred             HHHhcCcCEEEEcCCCccchhHHHHHHHHHHhC
Q 044721           71 VKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      +++++++|+||+++|.....+..+.-....++|
T Consensus        72 ~eal~~AD~Vvitag~~~~~g~~rd~~i~~~~G  104 (167)
T d1u8xx1          72 EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYG  104 (167)
T ss_dssp             HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTT
T ss_pred             hhccCCCCEEEECCCcCCCCceeHHHhhchhcC
Confidence            678899999999999886555444444455555

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.95  E-value=0.042  Score=43.06  Aligned_cols=34  Identities=15%  Similarity=0.326  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |..++|.|| |.-|..+|+.|++.|++|.++.+++
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            357999995 9999999999999999999998764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=92.94  E-value=0.19  Score=35.69  Aligned_cols=99  Identities=20%  Similarity=0.128  Sum_probs=56.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhc------cCCc------------EEEEccCCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK------KLGV------------NLVIGDVLN   66 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~------------~~~~~D~~~   66 (263)
                      ++|.|-| .|.||+.+.+.|..++.+|+++.-. ..  .+....+-...      ...+            .+....-.|
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~-~~--~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~   76 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL-TD--NKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD   76 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS-SC--HHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC-cc--hhhhhheeecccccCccccccccccceeEecceeEEEEecCC
Confidence            5788988 6999999999999999888775532 11  11111110000      0011            111122234


Q ss_pred             HHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeec
Q 044721           67 HESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPS  111 (263)
Q Consensus        67 ~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S  111 (263)
                      ++.+.=.-.++|+|+-|.|...-   .+.++.-.+.+ ++++++|
T Consensus        77 p~~i~W~~~gvdiViEcTG~f~~---~~~~~~hl~~g-akkViiS  117 (168)
T d2g82a1          77 PKEIPWAEAGVGVVIESTGVFTD---ADKAKAHLEGG-AKKVIIT  117 (168)
T ss_dssp             GGGCCTGGGTEEEEEECSSSCCB---HHHHTHHHHTT-CSEEEES
T ss_pred             hHHCcccccCCceeEeccccccc---hHHhhhhhccc-cceeeec
Confidence            44433222379999999997742   22344444568 9999976

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.86  E-value=0.049  Score=42.44  Aligned_cols=32  Identities=28%  Similarity=0.494  Sum_probs=28.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   38 (263)
                      .|+|.|| |-+|..++.+|+++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6899996 9999999999999996 699998874

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=92.85  E-value=0.37  Score=33.97  Aligned_cols=100  Identities=19%  Similarity=0.126  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhh--hc---cCCcE------------EEEccCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDH--FK---KLGVN------------LVIGDVL   65 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~--~~---~~~~~------------~~~~D~~   65 (263)
                      ++|.|-| .|.||+.+.+.+.++. .+|+++.-. ..  .+... .++.  .-   ...+.            +......
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~-~~--~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~   77 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDL-LD--ADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAER   77 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECS-SC--HHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCC-CC--HHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCC
Confidence            4788998 7999999999999875 455544322 11  22111 1110  00   01111            1111223


Q ss_pred             CHHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           66 NHESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        66 ~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +++.+.=--.++|+|+-|.|....   ..-++.-.+.| ++++++|.
T Consensus        78 ~p~~i~W~~~gvDiViEcTG~f~t---~~~~~~hl~~g-akkViiSa  120 (166)
T d1gado1          78 DPANLKWDEVGVDVVAEATGLFLT---DETARKHITAG-AKKVVMTG  120 (166)
T ss_dssp             SGGGGCHHHHTCSEEEECSSSCCS---HHHHTHHHHTT-CSEEEESS
T ss_pred             ChHHCCccccCCCEEEEccccccC---HHHHHHHhcCC-CceEEeec
Confidence            444332111279999999998742   22333445668 99999864

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=92.70  E-value=0.091  Score=35.44  Aligned_cols=87  Identities=15%  Similarity=0.160  Sum_probs=55.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-CCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhc-CcCEEEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIK-QVDVVIS   82 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vv~   82 (263)
                      .+++|.|| |.+|+++++.+.. .+++++++..+..    .+.-  ..  -.++.+.  +   .+.+++..+ .++..+.
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~----~k~G--~~--I~Gi~V~--~---~~~l~~~~~~~i~iai~   69 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDP----EKVG--RP--VRGGVIE--H---VDLLPQRVPGRIEIALL   69 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCT----TTTT--CE--ETTEEEE--E---GGGHHHHSTTTCCEEEE
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCch----HhcC--CE--ECCEEEe--c---HHHHHHHHhhcccEEEE
Confidence            47999995 9999999998754 4678777665422    1110  01  1234443  2   234555444 5677666


Q ss_pred             cCCCccchhHHHHHHHHHHhCCcceee
Q 044721           83 TVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        83 ~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +...   ...+.+++.+.+.+ ++.+.
T Consensus        70 ~i~~---~~~~~I~d~l~~~g-Ik~I~   92 (126)
T d2dt5a2          70 TVPR---EAAQKAADLLVAAG-IKGIL   92 (126)
T ss_dssp             CSCH---HHHHHHHHHHHHHT-CCEEE
T ss_pred             eCCH---HHHHHHHHHHHHcC-CCEEe
Confidence            6553   45678999999999 98775

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.65  E-value=0.13  Score=36.55  Aligned_cols=81  Identities=20%  Similarity=0.244  Sum_probs=45.9

Q ss_pred             CCeEEEEcC-CChhHHHHHHHHHHCC----CCEEEEEcCCCCCCcchhhhhhh-----hccCCcEEEEccCCCHHHHHHH
Q 044721            4 KSKILFIGG-TGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDH-----FKKLGVNLVIGDVLNHESLVKA   73 (263)
Q Consensus         4 ~~~ilVtGa-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~   73 (263)
                      .+||.|.|| +.+.+..++..+....    -++++++.++.   ..+.+.++.     ....+........+|.   .++
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~---~~~~~~~d~~~~~~~~~~~~~~~~~~~td~---~~a   74 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEG---KEKLEIVGALAKRMVEKAGVPIEIHLTLDR---RRA   74 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGG---HHHHHHHHHHHHHHHHHTTCCCEEEEESCH---HHH
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCcc---HHHHHHHHHHHHHHHHhcCCCceeeecCCc---hhh
Confidence            368999997 3355566665555432    37888888732   122322221     1112222222233343   457


Q ss_pred             hcCcCEEEEcCCCccch
Q 044721           74 IKQVDVVISTVGHTLLG   90 (263)
Q Consensus        74 ~~~~d~vv~~a~~~~~~   90 (263)
                      +++.|+||++++.....
T Consensus        75 l~gaDvVv~ta~~~~~~   91 (169)
T d1s6ya1          75 LDGADFVTTQFRVGGLE   91 (169)
T ss_dssp             HTTCSEEEECCCTTHHH
T ss_pred             cCCCCEEEEccccCCCC
Confidence            88999999999987533

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.63  E-value=0.07  Score=39.55  Aligned_cols=32  Identities=13%  Similarity=0.285  Sum_probs=29.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      -++|.| +|..|...|..|+++|++|.++.++.
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            489999 59999999999999999999999874

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.61  E-value=0.084  Score=37.59  Aligned_cols=35  Identities=11%  Similarity=0.215  Sum_probs=29.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .+++|+|.|| |.+|-.++..|.+.|++|.++.+..
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            3578999995 9999999999999998877766554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.60  E-value=1  Score=31.14  Aligned_cols=84  Identities=14%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             CeEEEEcCCChhHHH-HHHHHHHC-CCCEEEEE-cCCCCCCcchhhh-hhhhccCCcEEEEccCCCHHHHHHHhcCcCEE
Q 044721            5 SKILFIGGTGYIGKF-IVEASVKA-GHPTFVLV-RESTLSAPSKSQL-LDHFKKLGVNLVIGDVLNHESLVKAIKQVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~-l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   80 (263)
                      +++.|.| +|.+|+. ..+.|.+. +.+++.+. ++.     ++.+. .+.+   ++     ++.+  +++++.+++|+|
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~-----~~~~~~~~~~---~~-----~~~~--~~~~l~~~~D~V   65 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTR-----AKALPICESW---RI-----PYAD--SLSSLAASCDAV   65 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSC-----TTHHHHHHHH---TC-----CBCS--SHHHHHTTCSEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechh-----Hhhhhhhhcc---cc-----cccc--cchhhhhhcccc
Confidence            5899999 5999976 46666654 56766544 552     22221 1222   11     1222  234456789999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceee
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFF  109 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i  109 (263)
                      +-+....   .+..++..+.++| . +++
T Consensus        66 ~I~tp~~---~h~~~~~~al~~g-k-~V~   89 (164)
T d1tlta1          66 FVHSSTA---SHFDVVSTLLNAG-V-HVC   89 (164)
T ss_dssp             EECSCTT---HHHHHHHHHHHTT-C-EEE
T ss_pred             cccccch---hcccccccccccc-c-eee
Confidence            8876543   5567788888887 4 444

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.53  E-value=0.057  Score=41.71  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .+|+|.|| |-.|..++..|.+.|++|+++.|++
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            37999996 9999999999999999999999874

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.42  E-value=0.012  Score=44.32  Aligned_cols=26  Identities=23%  Similarity=0.322  Sum_probs=23.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPT   31 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V   31 (263)
                      |+|+|.|| |-+|..++..|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            68999996 999999999999999764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.076  Score=41.43  Aligned_cols=33  Identities=21%  Similarity=0.277  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ..+|+|.|| |.-|...+..|.++|++|+++-.+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            457999995 999999999999999999998765

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.70  E-value=0.13  Score=33.96  Aligned_cols=34  Identities=24%  Similarity=0.311  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---CCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVK---AGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~   38 (263)
                      +++++|.|| |++|-.++..|.+   .|.+|+++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999996 9999999987665   478999999874

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.48  E-value=0.1  Score=37.88  Aligned_cols=33  Identities=15%  Similarity=0.097  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEcCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG--HPTFVLVRES   38 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~   38 (263)
                      |||+|.|| |++|-.++..|.+.+  .+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999996 999999999999875  4688887764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.46  E-value=0.56  Score=33.33  Aligned_cols=84  Identities=13%  Similarity=0.078  Sum_probs=47.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHC-CCCEEEE-EcCCCCCCcchhhhh-hhhccCCcEEEEccCCCHHHHHHHh--cCcCE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLL-DHFKKLGVNLVIGDVLNHESLVKAI--KQVDV   79 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~   79 (263)
                      .++.|.| .|.+|+..++.|... +.+|+++ +++     +++.+.. +...-+....+   +.|   +++++  .++|+
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~-----~~~~~~~~~~~~~~~~~~~---~~~---~~~ll~~~~iD~   69 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRS-----LEKAKAFATANNYPESTKI---HGS---YESLLEDPEIDA   69 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSS-----HHHHHHHHHHTTCCTTCEE---ESS---HHHHHHCTTCCE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCC-----ccccccchhccccccceee---cCc---HHHhhhccccce
Confidence            5789999 599999999999875 5677654 455     3333322 22111111111   123   34444  36899


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhC
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAG  103 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~  103 (263)
                      ++-+....   .+..++..+.+.|
T Consensus        70 v~I~tp~~---~h~~~~~~~l~~g   90 (184)
T d1ydwa1          70 LYVPLPTS---LHVEWAIKAAEKG   90 (184)
T ss_dssp             EEECCCGG---GHHHHHHHHHTTT
T ss_pred             eeecccch---hhcchhhhhhhcc
Confidence            88776543   2334455555555

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=91.45  E-value=0.54  Score=33.26  Aligned_cols=99  Identities=21%  Similarity=0.220  Sum_probs=51.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhh-hhh--h---ccCCcE------------EEEccCCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL-LDH--F---KKLGVN------------LVIGDVLN   66 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~--~---~~~~~~------------~~~~D~~~   66 (263)
                      +|.|-| -|.||+.+.+.++++. .+|+.+  +... ..+.... ++.  .   ....+.            +....-.+
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaI--Nd~~-d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   78 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAV--NDLT-DANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERD   78 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEE--ECSS-CHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEE--cCCC-CHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCC
Confidence            678888 7999999999999774 444443  3211 1222111 100  0   001111            11112233


Q ss_pred             HHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           67 HESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        67 ~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ++++.=---++|+|+-|.|.....   .-++.-.+.| ++++++|.
T Consensus        79 p~~i~W~~~~vDiViEcTG~f~t~---~~~~~hl~~g-akkViiSa  120 (171)
T d3cmco1          79 PENLAWGEIGVDIVVESTGRFTKR---EDAAKHLEAG-AKKVIISA  120 (171)
T ss_dssp             GGGCCTGGGTCCEEEECSSSCCBH---HHHTHHHHTT-CSEEEESS
T ss_pred             HHHccccccCCcEEEEecCccCCH---HHHHHHHhCC-CceEEEec
Confidence            433211112799999999987422   2223334568 99998763

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.35  E-value=0.21  Score=34.80  Aligned_cols=34  Identities=15%  Similarity=0.418  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCC-EEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHP-TFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~   38 (263)
                      +++++|.|| |.+|.-.+..+.+.|++ |+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            468999996 99999999999999975 77777764

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.4  Score=34.96  Aligned_cols=32  Identities=25%  Similarity=0.282  Sum_probs=27.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |||++.| ++..|..+.+.|.+.|++|.++...
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTV   32 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcC
Confidence            6889998 6889999999999999998866543

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.32  E-value=0.51  Score=34.04  Aligned_cols=23  Identities=30%  Similarity=0.510  Sum_probs=20.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG   28 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g   28 (263)
                      ++|.|-| .|.||+.+.+.+.+++
T Consensus         3 ikigING-FGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           3 IKVGING-FGRIGRMVFQALCEDG   25 (190)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             eEEEEEC-CChHHHHHHHHHHHcC
Confidence            6899999 7999999999998875

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.19  E-value=0.29  Score=35.76  Aligned_cols=80  Identities=14%  Similarity=0.113  Sum_probs=45.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcch-hhhhhhh-ccCCcEEEE-ccCCCHHHHHHHhc-CcCEE
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK-SQLLDHF-KKLGVNLVI-GDVLNHESLVKAIK-QVDVV   80 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~~~-~D~~~~~~~~~~~~-~~d~v   80 (263)
                      |+|++.| ++..|..+.+.|.+.|++|..+.-.+....... ...+.++ ...++.++. .++.+++.++.+-+ ++|.+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            6788887 577899999999999999876553322100000 0000111 122344443 45666655544333 78988


Q ss_pred             EEcCC
Q 044721           81 ISTVG   85 (263)
Q Consensus        81 v~~a~   85 (263)
                      |....
T Consensus        80 i~~g~   84 (203)
T d2blna2          80 FSFYY   84 (203)
T ss_dssp             EEESC
T ss_pred             eeeec
Confidence            77654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.01  E-value=0.15  Score=38.68  Aligned_cols=34  Identities=29%  Similarity=0.223  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   38 (263)
                      +++|+|.|| |.-|..++..|.+.|. +|+++.|++
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            368999996 9999999999999995 888888874

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.91  E-value=0.12  Score=34.19  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHC---CCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKA---GHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~   38 (263)
                      +++++|.|| |++|-.++..|.+.   |.+|+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999996 99999999777654   45799998874

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.62  E-value=0.38  Score=40.70  Aligned_cols=102  Identities=13%  Similarity=0.125  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCC--------------CCcchhhh----hhhhccCCc--EEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQL----LDHFKKLGV--NLVIG   62 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--------------~~~~~~~~----~~~~~~~~~--~~~~~   62 (263)
                      ..+|+|.|+ |++|..+++.|+..|. ++++++.+.-.              ....+.+.    +..+ .+.+  ..+..
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~l-Np~v~i~~~~~  102 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-NSDVSGSFVEE  102 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTT-CTTSBCCEESS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHh-CCCCcEEEEcC
Confidence            368999996 8999999999999995 68887654211              00111111    1222 2333  23333


Q ss_pred             cCCCH-HHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee
Q 044721           63 DVLNH-ESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP  110 (263)
Q Consensus        63 D~~~~-~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~  110 (263)
                      ++.+. +.-.+.+++.|+||.+...  ......+-+.|.+.+ ++.+..
T Consensus       103 ~~~~~~~~~~~~~~~~dvVv~~~~~--~~~~~~l~~~c~~~~-ip~i~~  148 (529)
T d1yova1         103 SPENLLDNDPSFFCRFTVVVATQLP--ESTSLRLADVLWNSQ-IPLLIC  148 (529)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEESCC--HHHHHHHHHHHHHHT-CCEEEE
T ss_pred             CchhhhhhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEE
Confidence            22211 1112456789999987543  344556778888888 887764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.34  E-value=0.017  Score=40.46  Aligned_cols=65  Identities=20%  Similarity=0.246  Sum_probs=36.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEEcCCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVISTVGH   86 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~~a~~   86 (263)
                      |-+.| +|.+|+++++.|.+.++.+.+.+|+     +++.+.+.+.....    ..+.      .++++..|+||-+...
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~-----~~~~~~l~~~~~~~----~~~~------~~~~~~~DiVil~v~d   65 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRS-----IDRARNLAEVYGGK----AATL------EKHPELNGVVFVIVPD   65 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSS-----HHHHHHHHHHTCCC----CCSS------CCCCC---CEEECSCT
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCC-----hhhhcchhhccccc----ccch------hhhhccCcEEEEeccc
Confidence            34667 6999999999886654445677888     66655444332111    1122      2356678999988865


Q ss_pred             c
Q 044721           87 T   87 (263)
Q Consensus        87 ~   87 (263)
                      .
T Consensus        66 ~   66 (153)
T d2i76a2          66 R   66 (153)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.27  E-value=1.5  Score=34.52  Aligned_cols=105  Identities=13%  Similarity=0.098  Sum_probs=64.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHH---HHHHhcCcCEE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHES---LVKAIKQVDVV   80 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~d~v   80 (263)
                      +-+|+=.+ ...-|-...+.|+..|++|+=+-+.....  ...  ...+ ..+=..+..|+.+++.   +.++++++|++
T Consensus         6 girVld~~-~~~agp~~~~~lad~GA~VikvE~p~~~~--~~~--~~~~-nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~   79 (359)
T d1x74a1           6 GLRVVELA-GIGPGPHAAMILGDLGADVVRIDRPSSVD--GIS--RDAM-LRNRRIVTADLKSDQGLELALKLIAKADVL   79 (359)
T ss_dssp             TCEEEEEC-CSTHHHHHHHHHHHTTCEEEEEECC-------CC--CCGG-GCSCEEEECCTTSHHHHHHHHHHHTTCSEE
T ss_pred             CCEEEEcC-CchHHHHHHHHHHHhCCEEEEECCCCCCC--chh--hhhh-hCCCeEEEEeCcCHHHHHHHHHHHhhCCEE
Confidence            34555444 35667788889999999999876543210  000  0111 2344678899998754   56778899999


Q ss_pred             EEcCCCccchhHHHHHHHHHHhCCcceeee--ccccC
Q 044721           81 ISTVGHTLLGDQVKIIAAIKEAGNIKRFFP--SEFGN  115 (263)
Q Consensus        81 v~~a~~~~~~~~~~l~~~~~~~~~~~~~i~--S~~g~  115 (263)
                      |+|..+......---.+.+.+.+ .+.++.  |.||.
T Consensus        80 i~n~~pg~~~~lgl~~~~l~~~n-P~lI~~sisgfG~  115 (359)
T d1x74a1          80 IEGYRPGVTERLGLGPEECAKVN-DRLIYARMTGWGQ  115 (359)
T ss_dssp             EECSCTTHHHHHTCSHHHHHHHC-TTCEEEEEESSCS
T ss_pred             EecCCCCchhhcCCCHHHHHhhc-CCceEEEEeCCCC
Confidence            99987764222111245667777 666663  44554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.20  E-value=0.14  Score=38.15  Aligned_cols=32  Identities=19%  Similarity=0.366  Sum_probs=28.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGH-PTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   38 (263)
                      +|+|.|| |--|...+..|.++|+ +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6899996 9999999999999996 799998764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.10  E-value=0.1  Score=37.33  Aligned_cols=32  Identities=22%  Similarity=0.343  Sum_probs=26.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVR   36 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   36 (263)
                      ..+|+|.|| |++|-.++..|.+.|.++.++.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            457999995 99999999999999976555443

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=89.89  E-value=0.76  Score=33.38  Aligned_cols=83  Identities=17%  Similarity=0.185  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCC-cch---h-hhhhhhccCCcEEEEccCCCHHHHHHHhc--
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-PSK---S-QLLDHFKKLGVNLVIGDVLNHESLVKAIK--   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~---~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--   75 (263)
                      ..|+|+++| ++..+..+.+.|.+.|++|..+...+.... ...   . .........+......+..+.+...+.++  
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAEL   80 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhh
Confidence            468899998 588999999999999998776553321110 000   0 00011112345555555545455555554  


Q ss_pred             CcCEEEEcCCC
Q 044721           76 QVDVVISTVGH   86 (263)
Q Consensus        76 ~~d~vv~~a~~   86 (263)
                      ++|.++.....
T Consensus        81 ~~d~~v~~~~~   91 (206)
T d1fmta2          81 QADVMVVVAYG   91 (206)
T ss_dssp             TCSEEEEESCC
T ss_pred             cceEEEeeccc
Confidence            67877665443

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.72  E-value=0.18  Score=39.41  Aligned_cols=31  Identities=23%  Similarity=0.375  Sum_probs=28.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|| |.-|...+..|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789995 9999999999999999999998764

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.41  E-value=0.17  Score=35.36  Aligned_cols=31  Identities=19%  Similarity=0.240  Sum_probs=26.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      ||+|.|| |++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7899996 999999999986 477999988764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.28  E-value=0.15  Score=41.97  Aligned_cols=80  Identities=15%  Similarity=0.234  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCC--------------Ccchhhh----hhhhccC--CcEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQL----LDHFKKL--GVNLVIG   62 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~----~~~~~~~--~~~~~~~   62 (263)
                      ..+|||.|+ |++|+.+++.|+..|. ++++++.+.-..              ...|.+.    +..+ .+  ++..+..
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~-np~v~i~~~~~  114 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDR-VPNCNVVPHFN  114 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-STTCCCEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhh-CCCCceEeeec
Confidence            458999996 8899999999999996 789888763210              0112211    1111 23  3455555


Q ss_pred             cCCCHHHHHHHhcCcCEEEEcCCCc
Q 044721           63 DVLNHESLVKAIKQVDVVISTVGHT   87 (263)
Q Consensus        63 D~~~~~~~~~~~~~~d~vv~~a~~~   87 (263)
                      ++.+..  .+.+++.|+||.+.-..
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~~Dn~  137 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCGLDSI  137 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEECCSCH
T ss_pred             cccchH--HHHHHhcchheeccCcH
Confidence            554433  36788999999887643

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.28  E-value=0.68  Score=31.31  Aligned_cols=34  Identities=9%  Similarity=0.136  Sum_probs=29.2

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGT---GYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      .++|.|.|+|   +..|..+.+.|.+.|++++.+--+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            5789999997   579999999999999998876543

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=89.15  E-value=0.59  Score=32.98  Aligned_cols=100  Identities=16%  Similarity=0.174  Sum_probs=54.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhh--hc---cCCcE------------EEEccCCCH
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDH--FK---KLGVN------------LVIGDVLNH   67 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~--~~---~~~~~------------~~~~D~~~~   67 (263)
                      ||.|-| .|.||+.+.+.+++++.+|+.+--....  .+... .++.  .-   ...+.            +....-.++
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~--~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p   78 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIA--LEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP   78 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSC--HHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcC--HHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh
Confidence            678888 7999999999999998887765432111  11111 1110  00   01111            111122344


Q ss_pred             HHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           68 ESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        68 ~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +++.=.-.++|+|+-|.|.....   .-++.-.+.| ++++++|.
T Consensus        79 ~~i~W~~~gvD~ViEcTG~f~~~---~~~~~hl~~g-akkViisa  119 (169)
T d1dssg1          79 ENIPWSKAGAEYIVESTGVFTTI---EKASAHFKGG-AKKVIISA  119 (169)
T ss_dssp             GGCCHHHHTCCEEEECSSSCCSH---HHHGGGGTTT-CSEEEESS
T ss_pred             HHCCccccCCCEEEecCceEcCH---HHHHHHHhcC-CceEeecC
Confidence            43321112799999999987422   1122222447 89998763

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.07  E-value=1.5  Score=30.63  Aligned_cols=100  Identities=18%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhhhh-hh--h---ccCCcE------------EEEccCCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLL-DH--F---KKLGVN------------LVIGDVLN   66 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~--~---~~~~~~------------~~~~D~~~   66 (263)
                      +|.|-| .|.||+.+.+.++++. .+|+.+  +......+....+ +.  .   ....+.            +....-.|
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~I--Nd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~   78 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAI--NDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD   78 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEE--ECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEE--CCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCC
Confidence            678888 7999999999999763 455443  3211112222111 10  0   000111            11112234


Q ss_pred             HHHHHHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           67 HESLVKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        67 ~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      ++.+.=.-.++|+|+-|.|...-   .+.++.-.+.| ++++++|.
T Consensus        79 p~~i~W~~~gvdiViEcTG~f~~---~~~~~~hl~~g-akkViiSA  120 (166)
T d2b4ro1          79 PSQIPWGKCQVDVVCESTGVFLT---KELASSHLKGG-AKKVIMSA  120 (166)
T ss_dssp             GGGCCHHHHTCSEEEECSSSCCS---HHHHTHHHHTT-CSEEEESS
T ss_pred             hHHccccccCCCEEEEecccccc---hhhhhhhhccC-CCEEEEec
Confidence            44332111289999999998742   23344445678 99999764

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=89.02  E-value=0.21  Score=40.43  Aligned_cols=33  Identities=30%  Similarity=0.440  Sum_probs=26.0

Q ss_pred             CeEEEEcC------CChhH---HHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGG------TGYIG---KFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGa------tG~iG---~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ||||+.+.      +||+|   ..|+++|++.||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            67888764      57777   55689999999999998744

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.80  E-value=0.24  Score=33.63  Aligned_cols=34  Identities=29%  Similarity=0.465  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH----CCCCEEEEEcCC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVK----AGHPTFVLVRES   38 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~   38 (263)
                      .++++|.|| |++|-.++..|.+    .|.+|+++.+++
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            468999996 9999999998863    588999988865

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.70  E-value=0.17  Score=38.10  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            1 MASKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         1 m~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |.+..-|+|.|| |--|...+..|+++|.+|.++.+++
T Consensus         1 M~~~~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           1 MSQYSENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             CEEECSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            333446999996 9999999999999999999999884

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.59  E-value=0.16  Score=37.15  Aligned_cols=31  Identities=23%  Similarity=0.267  Sum_probs=25.2

Q ss_pred             CeEEEEcCCChhHH-----HHHHHHHHCCCCEEEEE
Q 044721            5 SKILFIGGTGYIGK-----FIVEASVKAGHPTFVLV   35 (263)
Q Consensus         5 ~~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~   35 (263)
                      |+++|||-..++|.     .|+..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999994337775     67888999999999876

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=88.55  E-value=4.2  Score=32.35  Aligned_cols=109  Identities=13%  Similarity=0.182  Sum_probs=66.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhh-hhhhhccCCcEEEEccCCCHHH---HHHHhcCcCE
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKKLGVNLVIGDVLNHES---LVKAIKQVDV   79 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~d~   79 (263)
                      +-+|+=.+ +..-|-...+.|+..|++|+=+-+..... ..+.. ..-.....+-..+..|+.+++.   +.++++.+|+
T Consensus        11 GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aDv   88 (402)
T d1xk7a1          11 GLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWAD-TIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDI   88 (402)
T ss_dssp             TCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCC-GGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCSE
T ss_pred             CCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCC-ccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcCC
Confidence            44666555 46668889999999999999877543111 10100 0111113455778899998754   5678889999


Q ss_pred             EEEcCCCccchhHHHHHHHHHHhCCcceeee--ccccC
Q 044721           80 VISTVGHTLLGDQVKIIAAIKEAGNIKRFFP--SEFGN  115 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~--S~~g~  115 (263)
                      +|+|.-+......---.+.+.+.+ .+.++.  |.||.
T Consensus        89 ~i~n~rpg~~~~lGl~~~~L~~~n-P~lI~~sisgfG~  125 (402)
T d1xk7a1          89 FIEASKGPAFARRGITDEVLWQHN-PKLVIAHLSGFGQ  125 (402)
T ss_dssp             EEEECSSSHHHHTTCCHHHHHHHC-TTCEEEEEESSCS
T ss_pred             ceeeecccccccccccccchhhcc-ccccceeeecccC
Confidence            999977653221111145666776 666653  55663

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=88.41  E-value=0.25  Score=39.28  Aligned_cols=30  Identities=30%  Similarity=0.307  Sum_probs=27.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |+|.| +|.-|..++.+|++.|++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78999 6999999999999999999999873

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.25  E-value=0.25  Score=31.96  Aligned_cols=36  Identities=11%  Similarity=0.097  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      .+|+|+|.|+ |.-|.-++..|++.+.+++...|+..
T Consensus        31 ~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          31 VGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             TTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            5789999994 99999999999988877766666643

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.19  E-value=0.52  Score=34.05  Aligned_cols=77  Identities=19%  Similarity=0.189  Sum_probs=54.3

Q ss_pred             CeEE-EEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh---ccCCcEEEEccCCCHHHHHHH--hcCcC
Q 044721            5 SKIL-FIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KKLGVNLVIGDVLNHESLVKA--IKQVD   78 (263)
Q Consensus         5 ~~il-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~--~~~~d   78 (263)
                      .+++ +|.|+|+...++++.+ . +.+|++++++     ++..+.....   ...++.++.++..+...+..-  +..+|
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d-----~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vd   97 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVD-----SEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVD   97 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESC-----HHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeech-----HHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcc
Confidence            3444 6788888888888776 3 4689999999     5444433221   145789999999887766554  35899


Q ss_pred             EEEEcCCCcc
Q 044721           79 VVISTVGHTL   88 (263)
Q Consensus        79 ~vv~~a~~~~   88 (263)
                      .|+.-.|...
T Consensus        98 gIl~DlGvSs  107 (192)
T d1m6ya2          98 GILMDLGVST  107 (192)
T ss_dssp             EEEEECSCCH
T ss_pred             eeeeccchhH
Confidence            9998888753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.16  E-value=0.27  Score=38.29  Aligned_cols=32  Identities=19%  Similarity=0.449  Sum_probs=29.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .|+|.|| |..|..++..|.+.|.+|+++.+++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            5999996 9999999999999999999998763

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.80  E-value=0.28  Score=36.57  Aligned_cols=32  Identities=22%  Similarity=0.455  Sum_probs=29.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      -|+|.|| |-.|...+..|++.|++|+++.+++
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3889996 9999999999999999999999874

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=86.69  E-value=4.1  Score=29.10  Aligned_cols=94  Identities=20%  Similarity=0.213  Sum_probs=57.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCC-CEEEEEcCCCCCCcchhhhhhhhccCCcEEEEc-----------c--------C
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIG-----------D--------V   64 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------D--------~   64 (263)
                      +||.|.| -|+-|..++.+|.+.|. .|-.+.-+..   .+.+.   ... ....+..+           |        .
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD---~~~L~---~~~-a~~ki~iG~~~t~G~G~g~~p~~g~~aa~   72 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTD---LQVLE---ASN-ADVKIQIGENITRGLGAGGRPEIGEQAAL   72 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESC---HHHHH---TCC-CSEEEECCTTTTTTSCCTTCHHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCC---HHHHh---cCC-cceEEecccccCCCcccccCchhhHhHHH
Confidence            4789999 59999999999999874 3544443321   11111   110 01111111           1        1


Q ss_pred             CCHHHHHHHhcCcCEEEEcCCCccch---hHHHHHHHHHHhCCcce
Q 044721           65 LNHESLVKAIKQVDVVISTVGHTLLG---DQVKIIAAIKEAGNIKR  107 (263)
Q Consensus        65 ~~~~~~~~~~~~~d~vv~~a~~~~~~---~~~~l~~~~~~~~~~~~  107 (263)
                      .+.+.+.+.+++.|.+|-+||...-.   ..--+.+.+++.+ ...
T Consensus        73 e~~~~I~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g-~lv  117 (194)
T d1w5fa1          73 ESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMG-ILT  117 (194)
T ss_dssp             HTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT-CEE
T ss_pred             HHHHHHHHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcC-Cce
Confidence            14567788888999999999887633   3456778888877 543

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=86.60  E-value=0.95  Score=31.84  Aligned_cols=99  Identities=16%  Similarity=0.134  Sum_probs=53.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCC-CCEEEEEcCCCCCCcchhh-hhhh--hc---cCCcE------------EEEccCC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDH--FK---KLGVN------------LVIGDVL   65 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~--~~---~~~~~------------~~~~D~~   65 (263)
                      -+|.|-| .|.||+.+.+.++++. .+++++.-....  .+... .++.  .-   ...+.            +......
T Consensus         2 ikIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~--~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~   78 (169)
T d1u8fo1           2 VKVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFID--LNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER   78 (169)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSC--HHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred             cEEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCcc--HHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECC
Confidence            3788998 7999999999999775 566554321111  12111 1110  00   00111            1111223


Q ss_pred             CHHHHHHHhc--CcCEEEEcCCCccchhHHHHHHHHHHhCCcceeeecc
Q 044721           66 NHESLVKAIK--QVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSE  112 (263)
Q Consensus        66 ~~~~~~~~~~--~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~S~  112 (263)
                      +++.+.  ++  ++|+|+-|.|.....   .-++.-.+.| ++++++|.
T Consensus        79 ~p~~i~--W~~~~vDiViEcTG~f~~~---~~~~~hl~~g-akkViiSa  121 (169)
T d1u8fo1          79 DPSKIK--WGDAGAEYVVESTGVFTTM---EKAGAHLQGG-AKRVIISA  121 (169)
T ss_dssp             SGGGCC--TTTTTCCEEEECSSSCCSH---HHHGGGGGGT-CSEEEESS
T ss_pred             ChhhCC--ccccCCCEEEEecceeccH---HHHHHHHhcC-CceEeecc
Confidence            444321  22  799999999987421   1222223457 89998764

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=86.49  E-value=0.3  Score=37.04  Aligned_cols=35  Identities=20%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChhHHH-----HHHHHHHCCCCEEEEEcCCC
Q 044721            4 KSKILFIGGTGYIGKF-----IVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~-----l~~~L~~~g~~V~~~~r~~~   39 (263)
                      |++|+|+| -|++|..     ++..|++.|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899998 8888865     55688899999999999864

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.40  E-value=0.37  Score=37.22  Aligned_cols=31  Identities=16%  Similarity=0.360  Sum_probs=28.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|+ |..|...+..|+++|.+|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899995 9999999999999999999998764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=86.39  E-value=0.63  Score=34.31  Aligned_cols=31  Identities=10%  Similarity=0.027  Sum_probs=21.9

Q ss_pred             eEEEEcCCChhHH-HHHHHHHHC-CCCEEE-EEcC
Q 044721            6 KILFIGGTGYIGK-FIVEASVKA-GHPTFV-LVRE   37 (263)
Q Consensus         6 ~ilVtGatG~iG~-~l~~~L~~~-g~~V~~-~~r~   37 (263)
                      +|.|.| .|.+|+ ++++.+... +.+|+. ++|+
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~   68 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGN   68 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            799999 599996 566666654 567664 4555

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.23  E-value=3.7  Score=28.13  Aligned_cols=104  Identities=20%  Similarity=0.205  Sum_probs=57.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEE-EEccCC---CHHHHHHHhc---
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNL-VIGDVL---NHESLVKAIK---   75 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~---~~~~~~~~~~---   75 (263)
                      +++++.|.+.+|+.|--++..+.+.|-++--+  +     ++..+.++.+..+.... -..|+.   +.+.+.++++   
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~-----~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~   74 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--E-----EKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLL   74 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--C-----HHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--C-----HHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHH
Confidence            47789999999999999999999999766432  2     22333333332222211 123332   4454545443   


Q ss_pred             ---CcCEEEEcCCC---c---cchhHHHHHHHHHHhCCcce-eeecccc
Q 044721           76 ---QVDVVISTVGH---T---LLGDQVKIIAAIKEAGNIKR-FFPSEFG  114 (263)
Q Consensus        76 ---~~d~vv~~a~~---~---~~~~~~~l~~~~~~~~~~~~-~i~S~~g  114 (263)
                         ++|.++.....   .   .......+++.+++.+ .++ ++.+..+
T Consensus        75 ~d~~vd~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kpv~~~~~~  122 (163)
T d2csua3          75 QDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVN-NEKPVLAMFMA  122 (163)
T ss_dssp             HSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHC-CCCCEEEEEEC
T ss_pred             cCCCcCEEEEeeccCCcccccHHHHHHHHHHHHHHhc-CCCcEEEEECC
Confidence               67876432221   1   1234456777777766 444 3334443

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.01  E-value=0.41  Score=33.94  Aligned_cols=68  Identities=19%  Similarity=0.227  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHhcCcCEEEE
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQVDVVIS   82 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vv~   82 (263)
                      ++|+|.|.| -|-.|.+=+..|...|.+|++--|..+..    .+..+   ..+.++        .++.++.+..|+|..
T Consensus        15 k~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s----~~~A~---~~Gf~v--------~~~~eA~~~aDiim~   78 (182)
T d1np3a2          15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSAT----VAKAE---AHGLKV--------ADVKTAVAAADVVMI   78 (182)
T ss_dssp             HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHH----HHHHH---HTTCEE--------ECHHHHHHTCSEEEE
T ss_pred             CCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCcc----HHHHh---hhcccc--------ccHHHHhhhcCeeee
Confidence            368999999 79999999999999999999977774321    11111   233333        456678889999999


Q ss_pred             cCCC
Q 044721           83 TVGH   86 (263)
Q Consensus        83 ~a~~   86 (263)
                      +.+-
T Consensus        79 L~PD   82 (182)
T d1np3a2          79 LTPD   82 (182)
T ss_dssp             CSCH
T ss_pred             ecch
Confidence            8873

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.69  E-value=1  Score=31.52  Aligned_cols=32  Identities=13%  Similarity=0.100  Sum_probs=22.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCC--CCEEEEEc
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAG--HPTFVLVR   36 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r   36 (263)
                      ..+|+|.| .|.+|+..++.|.+..  ..+.+.+.
T Consensus         7 k~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~   40 (172)
T d1lc0a1           7 KFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGF   40 (172)
T ss_dssp             SEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEE
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEec
Confidence            35899999 5999999888887543  23444443

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.42  E-value=1.4  Score=31.30  Aligned_cols=63  Identities=16%  Similarity=0.283  Sum_probs=45.4

Q ss_pred             HHHHHHCCCCEEEEEcCCCCCCcchhhhhhhhccCCcEEEEccCCCHHHHHHHh--cCcCEEEEcCCCcc
Q 044721           21 VEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAI--KQVDVVISTVGHTL   88 (263)
Q Consensus        21 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vv~~a~~~~   88 (263)
                      ++.+++++.+|++++|+     +...+........++..+..+..+.+.....+  .++|.|+.-.|...
T Consensus        33 s~~iL~~~~~viaiD~D-----~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQD-----PEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS   97 (182)
T ss_dssp             HHHHHHTTCEEEEEESC-----HHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             HHHHhcccCcEEEEhhh-----hhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence            34556667799999999     55555444444668899999998876654433  47999999888764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.35  E-value=0.47  Score=34.87  Aligned_cols=36  Identities=19%  Similarity=0.196  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCChhHH-----HHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGK-----FIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |++.|.|+|+.|++|.     +++..|++.|.+|.+++-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3568999999999987     56777888999999998653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.25  E-value=0.34  Score=37.58  Aligned_cols=27  Identities=30%  Similarity=0.321  Sum_probs=24.5

Q ss_pred             CCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721           12 GTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus        12 atG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      +||..|.+++++++.+|++|+++.+..
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            469999999999999999999998764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.18  E-value=0.41  Score=35.14  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChhHH-----HHHHHHHHCCCCEEEEEcCCC
Q 044721            4 KSKILFIGGTGYIGK-----FIVEASVKAGHPTFVLVREST   39 (263)
Q Consensus         4 ~~~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~r~~~   39 (263)
                      ||.|.|+++-|++|.     +++..|+++|.+|.+++-+..
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            578999999999886     567788889999999987743

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.20  E-value=1.2  Score=32.37  Aligned_cols=89  Identities=10%  Similarity=0.205  Sum_probs=57.0

Q ss_pred             CCCeEEEEc-CCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIG-GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .+++||=.| |+|+.-.++++.. ..| +|++++.+     +...+.+...  ...++..+..|..++......+..+|+
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis-----~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~  128 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYS-----AKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDL  128 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCC-----HHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCC-----HHHHHHHHHHhhccCCceEEEeeccCccccccccceEEE
Confidence            356788555 4777777777654 444 79998888     4444332221  235788999999998776666778899


Q ss_pred             EEEcCCCccchhHHHHHHHHH
Q 044721           80 VISTVGHTLLGDQVKIIAAIK  100 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~  100 (263)
                      +++.....  .....++..+.
T Consensus       129 v~~~~~~~--~~~~~~l~~~~  147 (209)
T d1nt2a_         129 IYQDIAQK--NQIEILKANAE  147 (209)
T ss_dssp             EEECCCST--THHHHHHHHHH
T ss_pred             EEecccCh--hhHHHHHHHHH
Confidence            88875443  23334444443

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.18  E-value=0.65  Score=35.17  Aligned_cols=36  Identities=14%  Similarity=0.288  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHH-----HHHHHHCCCCEEEEEcCCC
Q 044721            4 KSKILFIGGTGYIGKFI-----VEASVKAGHPTFVLVREST   39 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l-----~~~L~~~g~~V~~~~r~~~   39 (263)
                      +.+|+|+.|-|++|...     +..|+++|++|.+++-++.
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            56888888899999865     7889999999999999854

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.92  E-value=0.62  Score=33.79  Aligned_cols=30  Identities=20%  Similarity=0.294  Sum_probs=27.8

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|.|| |..|...+..+++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789996 999999999999999999999875

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=83.78  E-value=0.63  Score=35.36  Aligned_cols=32  Identities=13%  Similarity=0.196  Sum_probs=28.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHC-CCCEEEEEcCC
Q 044721            6 KILFIGGTGYIGKFIVEASVKA-GHPTFVLVRES   38 (263)
Q Consensus         6 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~   38 (263)
                      -|+|.|| |.-|...+..|+++ |++|+++.+++
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            3899996 99999999999985 99999999874

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.63  E-value=0.88  Score=28.33  Aligned_cols=32  Identities=19%  Similarity=0.144  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |||||.| +|+=-.+|+..|.+...+++++--|
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence            6999999 6888999999999998888876544

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.56  E-value=0.5  Score=36.87  Aligned_cols=32  Identities=19%  Similarity=0.319  Sum_probs=28.2

Q ss_pred             EEEEcCCChhHHHHHHHHHH-----CCCCEEEEEcCCC
Q 044721            7 ILFIGGTGYIGKFIVEASVK-----AGHPTFVLVREST   39 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~   39 (263)
                      |+|.|| |-.|..++..|++     .|++|+++.|++.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            899996 9999999999974     6999999998754

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=83.49  E-value=0.54  Score=37.29  Aligned_cols=30  Identities=33%  Similarity=0.464  Sum_probs=27.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      ++|.| +|.-|..++.+|++.|.+|.++-+-
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            88999 5999999999999999999999863

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.40  E-value=4.6  Score=29.03  Aligned_cols=104  Identities=15%  Similarity=0.142  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHH-HHHHH---HHCC-----CCEEEEEcCCCCCCcch-------------hhhhhhhccCCcEEEE
Q 044721            4 KSKILFIGGTGYIGKF-IVEAS---VKAG-----HPTFVLVRESTLSAPSK-------------SQLLDHFKKLGVNLVI   61 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~-l~~~L---~~~g-----~~V~~~~r~~~~~~~~~-------------~~~~~~~~~~~~~~~~   61 (263)
                      ..+++|.||||-+-+. |.++|   ...|     ..|++++|+.-..+.-+             ....+.+ ..++.++.
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f-~~~~~Y~~   98 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDF-FARNSYVA   98 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHH-HTTEECCB
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHH-HHhhcccc
Confidence            3469999999987754 55555   3344     45888888763210000             0001111 24678889


Q ss_pred             ccCCCHHHHHHHhc---------CcCEEEEcCCCccchhHHHHHHHHHHhC----Ccceeee
Q 044721           62 GDVLNHESLVKAIK---------QVDVVISTVGHTLLGDQVKIIAAIKEAG----NIKRFFP  110 (263)
Q Consensus        62 ~D~~~~~~~~~~~~---------~~d~vv~~a~~~~~~~~~~l~~~~~~~~----~~~~~i~  110 (263)
                      +|++|+++.+++-+         ....++..|=++.+  ...+.+.+.+.+    .+.|+|+
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvpP~~--f~~i~~~L~~~~l~~~~~~RiVv  158 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTV--YEAVTKNIHESCMSQIGWNRIIV  158 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSCHHH--HHHHHHHHHHHSCCSSSCEEEEE
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEecCHHH--HHHHHHHHHHhcCCccCceeEEE
Confidence            99999887665422         24578888766542  223444444443    1456665

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.59  E-value=4.7  Score=29.50  Aligned_cols=90  Identities=18%  Similarity=0.298  Sum_probs=55.8

Q ss_pred             CCCeEEEEcC-CChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIGG-TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .+++||=.|+ +|..-+++++. ... ..|++++.+     +...+.+...  ..+++..+.+|..++.........+|.
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS-----~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~  146 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYA-----PRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDV  146 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESC-----HHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCc-----HHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEE
Confidence            3678887765 78888888874 333 489999988     4443332222  235677888999888765554445677


Q ss_pred             EEEcCCCccchhHHHHHHHHHH
Q 044721           80 VISTVGHTLLGDQVKIIAAIKE  101 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~  101 (263)
                      +++.....  .....++..+..
T Consensus       147 i~~~~~~~--~~~~~~l~~~~r  166 (230)
T d1g8sa_         147 IYEDVAQP--NQAEILIKNAKW  166 (230)
T ss_dssp             EEECCCST--THHHHHHHHHHH
T ss_pred             eeccccch--HHHHHHHHHHHH
Confidence            77665433  344444554443

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.00  E-value=0.82  Score=33.32  Aligned_cols=35  Identities=29%  Similarity=0.356  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      .+|+|+|.| +|.-|-.++..|++.+.+++.+.|.+
T Consensus        31 ~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          31 SGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCEEEEEC-CCccHHHHHHHHHhhhcccccccccc
Confidence            579999999 59999999999999999988888874

>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Formyl-CoA transferase
species: Oxalobacter formigenes [TaxId: 847]

Probab=81.70  E-value=4.6  Score=32.38  Aligned_cols=110  Identities=15%  Similarity=0.107  Sum_probs=64.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCC-C----cchh---hhhhhhccCCcEEEEccCCCHHH---HHH
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-A----PSKS---QLLDHFKKLGVNLVIGDVLNHES---LVK   72 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~---~~~~~~~~~~~~~~~~D~~~~~~---~~~   72 (263)
                      +-+||=.+ ...-|-...+.|+..|++|+=+-+..... .    +...   ...-.....+=..+..|+.+++.   +.+
T Consensus         6 GirVld~~-~~~agp~~~~~LadlGAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~~~   84 (427)
T d2vjma1           6 GINVLDFT-HVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGKELLEQ   84 (427)
T ss_dssp             TCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCSGGGGSSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCcccccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHHHH
Confidence            44555444 35557788889999999999888542210 0    0000   00000112344678899998764   667


Q ss_pred             HhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee--ccccC
Q 044721           73 AIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP--SEFGN  115 (263)
Q Consensus        73 ~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~--S~~g~  115 (263)
                      +++.+|+||+|..+......---.+.+++.+ .+.++.  |.||.
T Consensus        85 Lv~~aDv~i~n~~pg~~~rlGL~~~~l~~~N-P~LI~~sisgfG~  128 (427)
T d2vjma1          85 MIKKADVMVENFGPGALDRMGFTWEYIQELN-PRVILASVKGYAE  128 (427)
T ss_dssp             HHHHCSEEEECCSTTHHHHTTCCHHHHHHHC-TTCEEEEEESSCT
T ss_pred             HHHhCCeeeECCCcchHHHcCCCchhhhhhC-Cccceeeeecccc
Confidence            8889999999987653221111245667776 666653  44554

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=81.29  E-value=0.69  Score=35.88  Aligned_cols=31  Identities=26%  Similarity=0.412  Sum_probs=28.4

Q ss_pred             EEEEcCCChhHHHHHHHHHHCCCCEEEEEcCC
Q 044721            7 ILFIGGTGYIGKFIVEASVKAGHPTFVLVRES   38 (263)
Q Consensus         7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (263)
                      |+|.|+ |..|...+..|+++|++|+++.+.+
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899994 9999999999999999999998764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.99  E-value=0.6  Score=36.24  Aligned_cols=33  Identities=18%  Similarity=0.256  Sum_probs=23.3

Q ss_pred             CeEEEEcC-CChh---HHHHHHHHHHCCCCEEEEEcC
Q 044721            5 SKILFIGG-TGYI---GKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         5 ~~ilVtGa-tG~i---G~~l~~~L~~~g~~V~~~~r~   37 (263)
                      |||+|++| |||-   +.+|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777654 4432   345889999999999887644

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=80.79  E-value=0.52  Score=33.55  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcC
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRE   37 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (263)
                      .+.++|.|| |-.|...+..|++.|.+|+++.|.
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            467999996 999999999999999999998765

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.68  E-value=3.9  Score=29.94  Aligned_cols=91  Identities=15%  Similarity=0.252  Sum_probs=59.2

Q ss_pred             CCCeEEEEc-CCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh--ccCCcEEEEccCCCHHHHHHHhcCcCE
Q 044721            3 SKSKILFIG-GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KKLGVNLVIGDVLNHESLVKAIKQVDV   79 (263)
Q Consensus         3 ~~~~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~   79 (263)
                      .+++||=.| |+|..-+++++..-.. -.|++++.+     +...+.+...  ...+...+..|..+++........+|+
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s-----~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~  146 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFS-----PRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDV  146 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESC-----HHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCc-----HHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEE
Confidence            367888555 4888888888755333 479999988     4444433222  134577889999988876666678899


Q ss_pred             EEEcCCCccchhHHHHHHHHHH
Q 044721           80 VISTVGHTLLGDQVKIIAAIKE  101 (263)
Q Consensus        80 vv~~a~~~~~~~~~~l~~~~~~  101 (263)
                      +++.....  .....+++.+..
T Consensus       147 i~~d~~~~--~~~~~~l~~~~~  166 (227)
T d1g8aa_         147 IFEDVAQP--TQAKILIDNAEV  166 (227)
T ss_dssp             EEECCCST--THHHHHHHHHHH
T ss_pred             EEEEcccc--chHHHHHHHHHH
Confidence            98876544  333445555543

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.63  E-value=2.1  Score=31.12  Aligned_cols=36  Identities=17%  Similarity=0.295  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH--------------------HCCC-CEEEEEcCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASV--------------------KAGH-PTFVLVREST   39 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~--------------------~~g~-~V~~~~r~~~   39 (263)
                      .+++++|.|+ |.++.-+++.|+                    +.|. +|++++|+..
T Consensus        38 ~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          38 SGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             cCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            4689999995 999999999887                    4664 6999998853

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=80.40  E-value=7.5  Score=30.93  Aligned_cols=108  Identities=12%  Similarity=0.082  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcch---------hh-hhhhhccCCcEEEEccCCCHHH---H
Q 044721            4 KSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK---------SQ-LLDHFKKLGVNLVIGDVLNHES---L   70 (263)
Q Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~-~~~~~~~~~~~~~~~D~~~~~~---~   70 (263)
                      +-+||=.+ ...-|-...+.|+..|++|+=+-+..... ..+         .. .... ...+=..+..|+.+++.   +
T Consensus         7 GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~R~~~~~~~~~~s~~~~~-~nr~K~si~lDL~~~~g~~~~   83 (417)
T d1q7ea_           7 GIKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGD-VTRHQLRDIPDIDALYFTM-LNSNKRSIELNTKTAEGKEVM   83 (417)
T ss_dssp             TCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCC-GGGTTTCSSTTSCCHHHHT-TCTTCEEEECCTTSHHHHHHH
T ss_pred             CCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCC-chhccCCCCCCCccHHHHH-hCCCCeEEEEeCcCHHHHHHH
Confidence            44555444 45667788889999999999887542110 000         00 0011 12345678899998755   4


Q ss_pred             HHHhcCcCEEEEcCCCccchhHHHHHHHHHHhCCcceeee--ccccC
Q 044721           71 VKAIKQVDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFP--SEFGN  115 (263)
Q Consensus        71 ~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~~~~~i~--S~~g~  115 (263)
                      .++++++|++|+|.-+......---.+.+.+.+ .+.++.  |.||.
T Consensus        84 ~~Li~~aDv~i~n~~pg~~~rlGl~~~~l~~~n-P~lI~~sisgfG~  129 (417)
T d1q7ea_          84 EKLIREADILVENFHPGAIDHMGFTWEHIQEIN-PRLIFGSIKGFDE  129 (417)
T ss_dssp             HHHHHHCSEEEECCCC-------CCHHHHHHHC-TTCEEEEEESSCT
T ss_pred             HHHHhcCcccEeccCCCcHhhcCCCHHHHHhhC-CCEEEEeeecccc
Confidence            577889999999987654322211245666776 566653  45554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=80.15  E-value=1.3  Score=31.05  Aligned_cols=76  Identities=8%  Similarity=-0.031  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHHCCCCEEEEEcCCCCCCcchhhhhhhh----------------ccCCcEEEEccCCC
Q 044721            3 SKSKILFIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF----------------KKLGVNLVIGDVLN   66 (263)
Q Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~   66 (263)
                      ++++||..|..  .|+ .+..|+++|++|++++.+     +...+..+..                ......++.+|..+
T Consensus        20 ~~~rvLd~GCG--~G~-~a~~la~~G~~V~gvD~S-----~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   91 (201)
T d1pjza_          20 PGARVLVPLCG--KSQ-DMSWLSGQGYHVVGAELS-----EAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   91 (201)
T ss_dssp             TTCEEEETTTC--CSH-HHHHHHHHCCEEEEEEEC-----HHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             CCCEEEEecCc--CCH-HHHHHHHcCCceEeeccc-----HHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence            46789999852  333 555888889999999988     3333322221                12345677788876


Q ss_pred             HHHHHHHhcCcCEEEEcCCCcc
Q 044721           67 HESLVKAIKQVDVVISTVGHTL   88 (263)
Q Consensus        67 ~~~~~~~~~~~d~vv~~a~~~~   88 (263)
                      ....  .....|.|+......+
T Consensus        92 l~~~--~~~~~D~i~~~~~l~~  111 (201)
T d1pjza_          92 LTAR--DIGHCAAFYDRAAMIA  111 (201)
T ss_dssp             STHH--HHHSEEEEEEESCGGG
T ss_pred             cccc--cccceeEEEEEeeeEe
Confidence            4431  1225677776554443