Citrus Sinensis ID: 044824

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
MAASCLPCTWLPAFELDHALEPLLLLSSNRRKTTAVSAKSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAVHK
ccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccHHHHHHHHHcccccccccccccccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHcHHcccccccccccccccccccccccccccEEEEEEcccHHHHHcccEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEcccccccccEEEEEEEcc
cccccccccEEEEcccccHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEccEccHHHHHHHHHHccccEEEccccccccccccEEEccccccHHHHccHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHccHcccccHHHHHcccHHHHHHHHHHcccccEEcEccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccHHHHHHHHHcccEccccccHHHcccccEcccccEcEEcEEEEEEEEEHHHHHHHcccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccHHHccEEEccccccHHHHHHHHHHHHHHHHHHHHccEEEcHHHHcEcHHHHHHHHHHHHHHHHHHcEEccEcccccEccccccEEcEcccEEcccccEEEEEEEEcccEEEEEEEEccc
maasclpctwlpafeldhalEPLLLLSSNRRKTTAVsaksekvapevKRRVVVTGlgavtplgddaHLFYTKLLEgvsgisqiegfdcselptRIAGEIKTLltdglvppkhakradNYLIYALIAGKKAladagiteqvsgelnknrcGVLIGTAMGSMRALKDGIDAIKISykkmspfsvpysmTSMASAIIAMDlewmgpnyaissacatsnccilTAANHIikgdadlmlcggsdgviipeGIAGFiacnnlsrrnsdptkasrpwdsdrdgfvmgeGAGVILLEELEHAKRRGAEIYAEfmggsftcdayhksesrldglGAVACMEKAltnsgvsredvnyinahatstrvgdpreFKAVMHcfgqnpelrmnstkSMTGHLLGAAGAVEAIATVKAIqtgwihpninlenpdkdvdtrvlvgpkkerLDIKVAMsnsfgfgghnsSILFAVHK
MAASCLPCTWLPAFELDHALEPLLLlssnrrkttavsaksekvapevkrrvVVTGlgavtplgddAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITeqvsgelnknrCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNnlsrrnsdptkasrpwdsdrdgfVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALtnsgvsredvnYINAHatstrvgdpreFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWihpninlenpdkdvdTRVLVGPKKERLDIKVAMsnsfgfgghnssilfavhk
MAASCLPCTWLPAFEldhalepllllSSNRRKTTAVSAKSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMsnsfgfgghnssILFAVHK
****CLPCTWLPAFELDHALEPLLLLS*******************VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNL*******************GFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQN**********MTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENP**DVDTRVLV********************************
**************************************************VVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAVHK
MAASCLPCTWLPAFELDHALEPLLLLSSNR**************PEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRR***********DSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAVHK
****CLPCTWLPAFELDHALEPLLLLSSNRR****************KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAVHK
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAASCLPCTWLPAFELDHALEPLLLLSSNRRKTTAVSAKSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAVHK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query460 2.2.26 [Sep-21-2011]
Q9C9P4541 3-oxoacyl-[acyl-carrier-p yes no 0.993 0.844 0.636 1e-177
P52410473 3-oxoacyl-[acyl-carrier-p no no 0.976 0.949 0.487 1e-127
P23902462 3-oxoacyl-[acyl-carrier-p N/A no 0.895 0.891 0.502 1e-124
P73283416 3-oxoacyl-[acyl-carrier-p N/A no 0.889 0.983 0.440 5e-90
Q9KQH9414 3-oxoacyl-[acyl-carrier-p yes no 0.882 0.980 0.436 5e-90
Q83E37414 3-oxoacyl-[acyl-carrier-p yes no 0.882 0.980 0.427 9e-89
P55338415 3-oxoacyl-[acyl-carrier-p yes no 0.876 0.971 0.439 5e-88
O34340413 3-oxoacyl-[acyl-carrier-p yes no 0.882 0.983 0.417 5e-85
Q8NXE1414 3-oxoacyl-[acyl-carrier-p yes no 0.854 0.949 0.404 4e-80
Q6GAU2414 3-oxoacyl-[acyl-carrier-p yes no 0.854 0.949 0.404 4e-80
>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1 Back     alignment and function desciption
 Score =  622 bits (1603), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/482 (63%), Positives = 375/482 (77%), Gaps = 25/482 (5%)

Query: 1   MAASCL---PCTWLPAFELDHALEPLL------LLSSNRRKTTAVS-------------A 38
           +  SCL   PCT    +  ++AL  L       L  + RR   A S             A
Sbjct: 63  LVTSCLDFGPCT---HYNNNNALSSLFGSNSVSLNRNQRRLNRAASSGGAMAVMEMEKEA 119

Query: 39  KSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGE 98
              K  P  +RRVVVTG+G  T LG D H FY  LL+G SGISQIE FDCSE PTRIAGE
Sbjct: 120 AVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGE 179

Query: 99  IKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMG 158
           IK+  T+G V PK +KR D +++Y L AGKKALAD G+T++V  E +K +CGVLIG+AMG
Sbjct: 180 IKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMG 239

Query: 159 SMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCI 218
            M+   D I+A++ISYKKM+PF VP++ T+M SA++AMDL WMGPNY+IS+ACATSN CI
Sbjct: 240 GMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 299

Query: 219 LTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFV 278
           L +ANHIIKG+AD+MLCGGSD VIIP G+ GF+AC  LS+RN+DPTKASRPWD++RDGFV
Sbjct: 300 LNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFV 359

Query: 279 MGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNS 338
           MGEGAGV+LLEELEHAK+RGA IYAEF+GGSFTCDAYH +E   DG G + C+E+AL ++
Sbjct: 360 MGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASA 419

Query: 339 GVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAI 398
           G+S+E +NYINAHATST  GD +E++A+ HCFGQNPEL++NSTKSM GHLLGAAGAVEA+
Sbjct: 420 GISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEAV 479

Query: 399 ATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAV 458
           ATV+AI+TGW+HPNINLENPD  VDT++LVGPKKERLDIK A+SNSFGFGGHNSSI+FA 
Sbjct: 480 ATVQAIRTGWVHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAP 539

Query: 459 HK 460
           +K
Sbjct: 540 YK 541
Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1
>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2 Back     alignment and function description
>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1 Back     alignment and function description
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1 Back     alignment and function description
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 Back     alignment and function description
>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 Back     alignment and function description
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 Back     alignment and function description
>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 Back     alignment and function description
>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1 Back     alignment and function description
>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query460
19698877541 putative 3-ketoacyl-ACP synthase [Arabid 0.993 0.844 0.634 0.0
255550355554 46 kDa ketoavyl-ACP synthase [Ricinus co 0.897 0.745 0.709 1e-180
294666535 chloroplast beta-ketoacyl-ACP synthase p 0.897 0.771 0.709 1e-180
224068526493 predicted protein [Populus trichocarpa] 0.984 0.918 0.649 1e-179
225444641555 PREDICTED: 3-oxoacyl-[acyl-carrier-prote 1.0 0.828 0.629 1e-179
297738522517 unnamed protein product [Vitis vinifera] 0.973 0.866 0.645 1e-179
210110425548 beta-ketoacyl-ACP synthase II-1 [Arachis 0.932 0.782 0.696 1e-177
297742964546 unnamed protein product [Vitis vinifera] 0.919 0.774 0.708 1e-176
359482462 600 PREDICTED: 3-oxoacyl-[acyl-carrier-prote 0.919 0.705 0.708 1e-176
9651933543 beta-ketoacyl-acyl carrier protein synth 0.895 0.758 0.696 1e-176
>gi|19698877|gb|AAL91174.1| putative 3-ketoacyl-ACP synthase [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/482 (63%), Positives = 374/482 (77%), Gaps = 25/482 (5%)

Query: 1   MAASCL---PCTWLPAFELDHALEPLL------LLSSNRRKTTAVS-------------A 38
           +  SCL   PCT    +  ++AL  L       L  + RR   A S             A
Sbjct: 63  LVTSCLDFGPCT---HYNNNNALSSLFGSNSVSLNRNQRRLNRAASSGGAMAVMEMEKEA 119

Query: 39  KSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGE 98
              K  P  +RRVVVTG+G  T LG D H FY  LL+G SGISQIE FDCSE PTRIAGE
Sbjct: 120 AVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGE 179

Query: 99  IKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMG 158
           IK+  T+G V PK +KR D +++Y L AGKKALAD G+T++V  E +K +CGVLIG+AMG
Sbjct: 180 IKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMG 239

Query: 159 SMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCI 218
            M+   D I+A++ISYKKM+PF VP++ T+M SA++AMDL WMGPNY+IS+ACATSN CI
Sbjct: 240 GMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 299

Query: 219 LTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFV 278
           L +ANHIIKG+AD+MLCGGSD VIIP G+ GF+AC  LS+RN+DPTKASRPWD++RDGFV
Sbjct: 300 LNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFV 359

Query: 279 MGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNS 338
           MGEGAGV+LLEELEHAK+RGA IYAEF+GGSFTCDAYH +E   DG G + C+E+AL ++
Sbjct: 360 MGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASA 419

Query: 339 GVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAI 398
           G+S+E +NYINAHATST  GD +E++A+ HCFGQNPEL++NSTKSM GHLLG AGAVEA+
Sbjct: 420 GISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGVAGAVEAV 479

Query: 399 ATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILFAV 458
           ATV+AI+TGW+HPNINLENPD  VDT++LVGPKKERLDIK A+SNSFGFGGHNSSI+FA 
Sbjct: 480 ATVQAIRTGWVHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAP 539

Query: 459 HK 460
           +K
Sbjct: 540 YK 541

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] Back     alignment and taxonomy information
>gi|294666|gb|AAA33872.1| chloroplast beta-ketoacyl-ACP synthase precursor [Ricinus communis] gi|148645269|gb|ABR01158.1| plastid 3-keto-acyl-ACP synthase II [Ricinus communis] Back     alignment and taxonomy information
>gi|224068526|ref|XP_002326139.1| predicted protein [Populus trichocarpa] gi|222833332|gb|EEE71809.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225444641|ref|XP_002276214.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738522|emb|CBI27767.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|210110425|gb|ACJ07142.1| beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|297742964|emb|CBI35831.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482462|ref|XP_002272201.2| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|9651933|gb|AAF91318.1|AF242848_1 beta-ketoacyl-acyl carrier protein synthase [Brassica napus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query460
TAIR|locus:2027252541 FAB1 "fatty acid biosynthesis 0.919 0.781 0.664 1.3e-157
TIGR_CMR|SO_2774412 SO_2774 "3-oxoacyl-(acyl-carri 0.810 0.905 0.452 7.6e-80
UNIPROTKB|Q9KQH9414 fabF "3-oxoacyl-[acyl-carrier- 0.839 0.932 0.441 5.4e-79
TIGR_CMR|VC_2019414 VC_2019 "3-oxoacyl-(acyl-carri 0.839 0.932 0.441 5.4e-79
TIGR_CMR|GSU_1605410 GSU_1605 "3-oxoacyl-(acyl-carr 0.878 0.985 0.429 6.8e-79
TIGR_CMR|CBU_0497414 CBU_0497 "3-oxoacyl-acyl carri 0.839 0.932 0.423 1.3e-77
TIGR_CMR|CPS_2299412 CPS_2299 "3-oxoacyl-[acyl-carr 0.830 0.927 0.429 6.3e-76
UNIPROTKB|P0AAI5413 fabF "FabF" [Escherichia coli 0.810 0.903 0.415 2.1e-75
TIGR_CMR|ECH_0882422 ECH_0882 "3-oxoacyl-(acyl-carr 0.808 0.881 0.402 5.9e-73
TIGR_CMR|CHY_1445412 CHY_1445 "3-oxoacyl-(acyl-carr 0.845 0.944 0.392 1.6e-72
TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
 Identities = 281/423 (66%), Positives = 344/423 (81%)

Query:    38 AKSEKVAPEVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAG 97
             A   K  P  +RRVVVTG+G  T LG D H FY  LL+G SGISQIE FDCSE PTRIAG
Sbjct:   119 AAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG 178

Query:    98 EIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAM 157
             EIK+  T+G V PK +KR D +++Y L AGKKALAD G+T++V  E +K +CGVLIG+AM
Sbjct:   179 EIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAM 238

Query:   158 GSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCC 217
             G M+   D I+A++ISYKKM+PF VP++ T+M SA++AMDL WMGPNY+IS+ACATSN C
Sbjct:   239 GGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFC 298

Query:   218 ILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGF 277
             IL +ANHIIKG+AD+MLCGGSD VIIP G+ GF+AC  LS+RN+DPTKASRPWD++RDGF
Sbjct:   299 ILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGF 358

Query:   278 VMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTN 337
             VMGEGAGV+LLEELEHAK+RGA IYAEF+GGSFTCDAYH +E   DG G + C+E+AL +
Sbjct:   359 VMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALAS 418

Query:   338 SGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEA 397
             +G+S+E +NYINAHATST  GD +E++A+ HCFGQNPEL++NSTKSM GHLLGAAGAVEA
Sbjct:   419 AGISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEA 478

Query:   398 IATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMXXXXXXXXXXXXILFA 457
             +ATV+AI+TGW+HPNINLENPD  VDT++LVGPKKERLDIK A+            I+FA
Sbjct:   479 VATVQAIRTGWVHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSIIFA 538

Query:   458 VHK 460
              +K
Sbjct:   539 PYK 541
GO:0003824 "catalytic activity" evidence=IEA
GO:0004312 "fatty acid synthase activity" evidence=ISS
GO:0006633 "fatty acid biosynthetic process" evidence=IEA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0009058 "biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA;TAS
GO:0004315 "3-oxoacyl-[acyl-carrier-protein
GO:0009536 "plastid" evidence=ISS
GO:0009631 "cold acclimation" evidence=IMP
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016049 "cell growth" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030243 "cellulose metabolic process" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0042335 "cuticle development" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2299 CPS_2299 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q83E37FABF_COXBU2, ., 3, ., 1, ., 1, 7, 90.42710.88260.9806yesno
P0AAI8FABF_SHIFL2, ., 3, ., 1, ., 1, 7, 90.40920.87820.9782yesno
Q9NWU1OXSM_HUMAN2, ., 3, ., 1, ., 4, 10.39090.88910.8910yesno
Q8NXE1FABF_STAAW2, ., 3, ., 1, ., 1, 7, 90.40470.85430.9492yesno
P0AAI6FABF_ECOL62, ., 3, ., 1, ., 1, 7, 90.40920.87820.9782yesno
P57193FABB_BUCAI2, ., 3, ., 1, ., 4, 10.35430.86080.9753yesno
O94297OXSM_SCHPO2, ., 3, ., 1, ., 4, 10.37610.85210.9201yesno
O34340FABF_BACSU2, ., 3, ., 1, ., 1, 7, 90.41720.88260.9830yesno
Q9KQH9FABF_VIBCH2, ., 3, ., 1, ., 1, 7, 90.43680.88260.9806yesno
Q5TKS0FABF_STAAU2, ., 3, ., 1, ., 1, 7, 90.40520.84780.9677yesno
Q9CBS7FAB1_MYCLE2, ., 3, ., 1, ., 4, 10.34350.82170.9086yesno
P63456FAB2_MYCTU2, ., 3, ., 1, ., 4, 10.36710.85650.9448yesno
P63457FAB2_MYCBO2, ., 3, ., 1, ., 4, 10.36710.85650.9448yesno
Q99VA6FABF_STAAM2, ., 3, ., 1, ., 1, 7, 90.40470.85430.9492yesno
Q5HHA1FABF_STAAC2, ., 3, ., 1, ., 1, 7, 90.40470.85430.9492yesno
P55338FABF_VIBHA2, ., 3, ., 1, ., 1, 7, 90.43960.87600.9710yesno
P39525CEM1_YEAST2, ., 3, ., 1, ., 4, 10.33560.88040.9162yesno
Q0VCA7OXSM_BOVIN2, ., 3, ., 1, ., 4, 10.38670.89340.8934yesno
Q7A6F8FABF_STAAN2, ., 3, ., 1, ., 1, 7, 90.40470.85430.9492yesno
P63454FAB1_MYCTU2, ., 3, ., 1, ., 4, 10.34350.82170.9086yesno
Q6GIA3FABF_STAAR2, ., 3, ., 1, ., 1, 7, 90.40570.85210.9468yesno
P56902FABF_RHIME2, ., 3, ., 1, ., 1, 7, 90.41760.87600.9572yesno
Q9D404OXSM_MOUSE2, ., 3, ., 1, ., 4, 10.38470.88690.8888yesno
Q6GAU2FABF_STAAS2, ., 3, ., 1, ., 1, 7, 90.40470.85430.9492yesno
P23902KASC1_HORVU2, ., 3, ., 1, ., 4, 10.50240.89560.8917N/Ano
Q8KA28FABB_BUCAP2, ., 3, ., 1, ., 4, 10.36160.86730.9803yesno
Q89AY4FABB_BUCBP2, ., 3, ., 1, ., 4, 10.37220.86300.9754yesno
P43710FABB_HAEIN2, ., 3, ., 1, ., 4, 10.37640.850.9630yesno
Q9C9P4KASC2_ARATH2, ., 3, ., 1, ., 4, 10.63690.99340.8447yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
PLN02787540 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei 0.0
cd00834406 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot 0.0
TIGR03150407 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei 1e-179
PRK06333424 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei 1e-172
PRK07314411 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei 1e-170
COG0304412 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy 1e-155
PTZ00050421 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein 1e-126
PRK08722414 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei 1e-110
PLN02836437 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei 1e-109
PRK08439406 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei 1e-108
PRK07967406 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei 6e-94
PRK07910418 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei 1e-92
PRK09116405 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei 3e-78
PRK06501425 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei 6e-75
cd00828407 cd00828, elong_cond_enzymes, "elongating" condensi 2e-73
PRK14691342 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei 8e-72
PRK07103410 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl 1e-68
pfam00109243 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, 6e-59
PRK05952381 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei 3e-58
cd00825332 cd00825, decarbox_cond_enzymes, decarboxylating co 2e-52
cd00833421 cd00833, PKS, polyketide synthases (PKSs) polymeri 5e-52
PRK09185392 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei 3e-49
cd00832399 cd00832, CLF, Chain-length factor (CLF) is a facto 2e-39
pfam02801119 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase 9e-36
COG3321 1061 COG3321, COG3321, Polyketide synthase modules and 4e-33
cd00327254 cd00327, cond_enzymes, Condensing enzymes; Family 7e-25
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 2e-23
smart00825298 smart00825, PKS_KS, Beta-ketoacyl synthase 3e-12
smart00825298 smart00825, PKS_KS, Beta-ketoacyl synthase 3e-06
PRK06519398 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei 0.001
PRK06147348 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protei 0.002
>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information 
 Score =  706 bits (1823), Expect = 0.0
 Identities = 306/435 (70%), Positives = 362/435 (83%), Gaps = 6/435 (1%)

Query: 32  KTTAVSAKSEKVAPEVK------RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEG 85
           K  AV+ + EK     K      RRVVVTG+G V+PLG D  +FY  LLEGVSGIS+IE 
Sbjct: 106 KAMAVAVQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIER 165

Query: 86  FDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELN 145
           FDCS+ PTRIAGEIK+  TDG V PK +KR D +++Y L AGKKALAD GITE V  EL+
Sbjct: 166 FDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELD 225

Query: 146 KNRCGVLIGTAMGSMRALKDGIDAIKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNY 205
           K +CGVLIG+AMG M+   D I+A++ISY+KM+PF VP++ T+M SA++AMDL WMGPNY
Sbjct: 226 KTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 285

Query: 206 AISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTK 265
           +IS+ACATSN CIL AANHII+G+AD+MLCGGSD  IIP G+ GF+AC  LS+RN DPTK
Sbjct: 286 SISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTK 345

Query: 266 ASRPWDSDRDGFVMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGL 325
           ASRPWD +RDGFVMGEGAGV+LLEELEHAK+RGA IYAEF+GGSFTCDAYH +E   +G 
Sbjct: 346 ASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGA 405

Query: 326 GAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMT 385
           G + C+EKAL  SGVS+EDVNYINAHATST+ GD +E++A+M CFGQNPELR+NSTKSM 
Sbjct: 406 GVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMI 465

Query: 386 GHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSF 445
           GHLLGAAGAVEAIATV+AI+TGW+HPNINLENP+  VDT+VLVGPKKERLDIKVA+SNSF
Sbjct: 466 GHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSF 525

Query: 446 GFGGHNSSILFAVHK 460
           GFGGHNSSILFA +K
Sbjct: 526 GFGGHNSSILFAPYK 540

Length = 540
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase Back     alignment and domain information
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase Back     alignment and domain information
>gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 460
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 100.0
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 100.0
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 100.0
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
cd00832399 CLF Chain-length factor (CLF) is a factor required 100.0
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 100.0
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 100.0
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 100.0
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 100.0
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 100.0
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 100.0
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 100.0
COG3321 1061 Polyketide synthase modules and related proteins [ 100.0
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 100.0
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 100.0
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 100.0
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 100.0
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 100.0
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 100.0
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 100.0
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 100.0
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.95
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.95
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.95
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.95
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.94
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.94
PRK09051394 beta-ketothiolase; Provisional 99.94
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.94
PRK05790393 putative acyltransferase; Provisional 99.93
PF02801119 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina 99.93
PRK07516389 acetyl-CoA acetyltransferase; Provisional 99.93
PLN02287452 3-ketoacyl-CoA thiolase 99.93
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.93
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.93
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.93
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 99.92
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.92
PRK07851406 acetyl-CoA acetyltransferase; Provisional 99.92
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.92
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 99.92
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.92
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.92
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.92
PLN02644394 acetyl-CoA C-acetyltransferase 99.91
PRK08256391 lipid-transfer protein; Provisional 99.91
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 99.91
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.91
PRK06158384 thiolase; Provisional 99.91
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.91
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 99.91
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 99.91
PRK08131401 acetyl-CoA acetyltransferase; Provisional 99.91
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 99.91
PRK06365430 acetyl-CoA acetyltransferase; Provisional 99.91
PRK06059399 lipid-transfer protein; Provisional 99.91
PRK06366388 acetyl-CoA acetyltransferase; Provisional 99.9
PRK06065392 acetyl-CoA acetyltransferase; Provisional 99.9
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.9
PRK06157398 acetyl-CoA acetyltransferase; Validated 99.9
PRK06289403 acetyl-CoA acetyltransferase; Provisional 99.9
PRK08142388 acetyl-CoA acetyltransferase; Provisional 99.9
PRK06504390 acetyl-CoA acetyltransferase; Provisional 99.89
PRK08170426 acetyl-CoA acetyltransferase; Provisional 99.89
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 99.89
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.88
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 99.88
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.88
PRK06066385 acetyl-CoA acetyltransferase; Provisional 99.88
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 99.87
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.86
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.86
PRK07855386 lipid-transfer protein; Provisional 99.85
PRK09268427 acetyl-CoA acetyltransferase; Provisional 99.85
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 99.84
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.84
PRK07937352 lipid-transfer protein; Provisional 99.83
PRK08257498 acetyl-CoA acetyltransferase; Validated 99.82
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.81
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.8
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 99.8
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.79
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 99.79
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 99.78
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 99.77
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 99.76
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 99.74
PRK06840339 hypothetical protein; Validated 99.74
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.7
cd00827324 init_cond_enzymes "initiating" condensing enzymes 99.69
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 99.68
PRK04262347 hypothetical protein; Provisional 99.67
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 99.65
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 99.65
PLN03172393 chalcone synthase family protein; Provisional 99.64
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 99.62
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.62
PLN03169391 chalcone synthase family protein; Provisional 99.58
PLN03171399 chalcone synthase-like protein; Provisional 99.57
PLN03170401 chalcone synthase; Provisional 99.55
PLN03173391 chalcone synthase; Provisional 99.5
PLN03168389 chalcone synthase; Provisional 99.49
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.48
PLN02854521 3-ketoacyl-CoA synthase 99.46
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 99.46
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 99.44
PLN02377502 3-ketoacyl-CoA synthase 99.42
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 99.34
PRK08304337 stage V sporulation protein AD; Validated 99.34
PLN02577 459 hydroxymethylglutaryl-CoA synthase 99.27
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 99.27
TIGR01833 454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 99.21
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 99.2
PLN02192511 3-ketoacyl-CoA synthase 99.17
PLN02932478 3-ketoacyl-CoA synthase 99.16
PRK12404334 stage V sporulation protein AD; Provisional 99.16
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 99.13
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 99.11
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 98.75
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 98.64
PLN00415466 3-ketoacyl-CoA synthase 98.63
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 98.43
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 98.39
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.11
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 97.63
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 97.1
KOG1393 462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 90.44
PRK08170 426 acetyl-CoA acetyltransferase; Provisional 87.05
PRK06065 392 acetyl-CoA acetyltransferase; Provisional 85.37
PRK06205 404 acetyl-CoA acetyltransferase; Provisional 84.81
PRK07937 352 lipid-transfer protein; Provisional 84.76
PRK12578 385 acetyl-CoA acetyltransferase; Provisional 84.26
PLN02644 394 acetyl-CoA C-acetyltransferase 83.54
PRK06059 399 lipid-transfer protein; Provisional 83.45
PRK09051 394 beta-ketothiolase; Provisional 83.06
PRK05790 393 putative acyltransferase; Provisional 82.2
PRK06157 398 acetyl-CoA acetyltransferase; Validated 82.0
PRK06365 430 acetyl-CoA acetyltransferase; Provisional 81.8
PRK06158 384 thiolase; Provisional 81.63
cd00327 254 cond_enzymes Condensing enzymes; Family of enzymes 80.74
PRK07801 382 acetyl-CoA acetyltransferase; Provisional 80.54
PRK06445 394 acetyl-CoA acetyltransferase; Provisional 80.34
PRK07855 386 lipid-transfer protein; Provisional 80.29
PRK05656 393 acetyl-CoA acetyltransferase; Provisional 80.11
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-93  Score=655.87  Aligned_cols=412  Identities=49%  Similarity=0.780  Sum_probs=391.6

Q ss_pred             CCceEEEecceecCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccccccCCCCChHHhhhcCHHHHHHHHHH
Q 044824           48 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAG  127 (460)
Q Consensus        48 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~~~~~~l~l~a~  127 (460)
                      ++||||||||+++|+|.+++++|++|.+|+++|+.++.++.+.+|...+|+|+.|+.+.|+++...|+|+.+.+|++.++
T Consensus        23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa  102 (440)
T KOG1394|consen   23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA  102 (440)
T ss_pred             ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence            78999999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCcCCCcEEEEEeccCCchhHHHHHHHHH-HhhhccCCCCCccccccchHHHHHHHhhcCCcceee
Q 044824          128 KKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAI-KISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYA  206 (460)
Q Consensus       128 ~~Al~dAGl~~~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~  206 (460)
                      ++||+||+|.+..+++.+..++||.+|+++++++.+....+.+ +.++++++|+++|..+.|+.++++++.+|++||+.+
T Consensus       103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs  182 (440)
T KOG1394|consen  103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS  182 (440)
T ss_pred             HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence            9999999998876677788999999999999998887766677 777999999999999999999999999999999999


Q ss_pred             cCCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcChHHHHHHHhcccccccCCCCCCCCCCCCCCCCCccccceeEEE
Q 044824          207 ISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVI  286 (460)
Q Consensus       207 v~~acaS~~~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal  286 (460)
                      ++++|++|..+|..|++.|+.|++|++|+||+|..++|..+.+|.+.+.|++++++|...+||||.+|||||+|||++++
T Consensus       183 vSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagvl  262 (440)
T KOG1394|consen  183 VSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGVL  262 (440)
T ss_pred             hHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccHHHHhcCCeeEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q 044824          287 LLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREFKAV  366 (460)
Q Consensus       287 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~~~~al~~Agl~~~dId~v~~h~tgt~~~D~~E~~al  366 (460)
                      |||++|+|++||++||+++.||+.++|.+|++.|.|++.+...||+++|++||+.|+||+||++|+|+|+.+|..|.+|+
T Consensus       263 vlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai  342 (440)
T KOG1394|consen  263 VLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAI  342 (440)
T ss_pred             ehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCc-cccccccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCcccccCCcccc----cCCcEEE
Q 044824          367 MHCFGQNPEL-RMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKER----LDIKVAM  441 (460)
Q Consensus       367 ~~~f~~~~~~-~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l  441 (460)
                      +++|+++... .|+|+|+.+||.+||+|+++.|..+++++++++||++|+++|++.+++++ ++....+    .+++++|
T Consensus       343 ~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~-~~~~~~~~~~~~~~~val  421 (440)
T KOG1394|consen  343 KRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDY-VPLKASEKKGGNKVRVAL  421 (440)
T ss_pred             HHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccccccc-cccccccccccccceEEE
Confidence            9999987443 79999999999999999999999999999999999999999999988875 3333222    4578999


Q ss_pred             EEcccccceeeeEEEeecC
Q 044824          442 SNSFGFGGHNSSILFAVHK  460 (460)
Q Consensus       442 ~~s~g~gG~~~~~il~~~~  460 (460)
                      +|||||||+|+++++.+++
T Consensus       422 sNSFGFGGtNaSl~fa~~~  440 (440)
T KOG1394|consen  422 SNSFGFGGTNASLCFAKFK  440 (440)
T ss_pred             ecccccCCcchhheeeecC
Confidence            9999999999999999874

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
1j3n_A408 Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei 3e-88
1e5m_A416 Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas 2e-83
2gqd_A437 The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii 5e-74
1b3n_A412 Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta 1e-71
2gfw_A427 Structure Of Wild Type E. Coli Fabf (Kasii) Length 1e-71
2gfy_A427 Structure Of E. Coli Fabf(K335a) Mutant With Covale 6e-71
3hnz_A427 Structure Of E. Coli Fabf(C163a) In Complex With Pl 1e-70
2gfv_A427 Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng 2e-70
1ox0_A430 The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie 5e-69
3o04_A413 Crystal Structure Of The Beta-Keto-Acyl Carrier Pro 5e-68
2alm_A431 Crystal Structure Analysis Of A Mutant Beta-Ketoacy 7e-68
2rjt_A428 Crystal Structure Analysis Of A Surface Entropy Red 1e-67
1w0i_A431 Arabidopsis Thaliana Mitochondrial Kas Length = 431 5e-67
2iwy_A438 Human Mitochondrial Beta-ketoacyl Acp Synthase Leng 6e-67
2c9h_A444 Structure Of Mitochondrial Beta-Ketoacyl Synthase L 1e-65
4ddo_A451 Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei 1e-65
4f32_A451 Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei 2e-64
3kzu_A428 Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei 6e-62
3e60_A424 Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei 1e-60
1dd8_A406 Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr 7e-57
1fj4_A406 The Structure Of Beta-Ketoacyl-[acyl Carrier Protei 3e-56
2byw_A418 Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C 4e-56
1h4f_A406 E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha 5e-56
2byz_A418 Structure Of E. Coli Kas I H298q Mutant In Complex 2e-55
2byy_A418 E. Coli Kas I H298e Mutation Length = 418 3e-55
3lrf_A428 Crystal Structure Of Beta-Ketoacyl Synthase From Br 6e-53
3u0f_A411 The Structure Of Beta-Ketoacyl Synthase From Brucel 1e-52
1f91_A406 Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In 1e-51
1ek4_A418 Beta-Ketoacyl [acyl Carrier Protein] Synthase I In 1e-51
2vb7_C406 Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap 4e-51
2gp6_A434 X-Ray Crystal Structure Of Mycobacterium Tuberculos 2e-49
2wgd_A416 Crystal Structure Of Kasa Of Mycobacterium Tubercul 6e-48
1tqy_A424 The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le 7e-48
3oyt_A410 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo 2e-47
2wgf_A416 Crystal Structure Of Mycobacterium Tuberculosis C17 1e-46
4ewg_A412 Crystal Structure Of A Beta-Ketoacyl Synthase From 3e-44
1tqy_B415 The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le 1e-22
2qo3_A 915 Crystal Structure Of [ks3][at3] Didomain From Modul 3e-21
2hg4_A 917 Structure Of The Ketosynthase-acyltransferase Didom 7e-21
3hhd_A 965 Structure Of The Human Fatty Acid Synthase Ks-Mat D 5e-19
2vz8_A 2512 Crystal Structure Of Mammalian Fatty Acid Synthase 5e-17
3zen_D3089 Cryo-em Structure Of The Mycobacterial Fatty Acid S 2e-15
2uv9_A 1878 Crystal Structure Of Fatty Acid Synthase From Therm 4e-07
2pff_A 1688 Structural Insights Of Yeast Fatty Acid Synthase Le 3e-05
2uv8_A 1887 Crystal Structure Of Yeast Fatty Acid Synthase With 3e-05
2vkz_A 1887 Structure Of The Cerulenin-Inhibited Fungal Fatty A 3e-05
>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 Back     alignment and structure 
Iteration: 1

 Score =  322 bits (825), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 178/390 (45%), Positives = 243/390 (62%), Gaps = 6/390 (1%)
Query: 49  RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLV 108
           RRVVVTGLGA+TP+G     F+   L G SG+  I  FD S LP RIA E+  +     +
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVD-VDPGAYL 60
Query: 109 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGID 168
             K  +R D ++ YALIA + AL DAG+  +   +L+  R G L+GT +G M   +    
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 169 A-IKISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIK 227
             ++    ++SPF +P  + +MASA IAM   + GP+  + +ACAT    + +A   I  
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 228 GDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVIL 287
           G+ADL+L GG++  I P  I  F     LS RN +P KASRP+   RDGFVMGEGAGV++
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 288 LEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNY 347
           LE  EHAK+RGA IYAE +G   + DA+H +E   +G GA   M +AL ++G++ E V Y
Sbjct: 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGY 297
Query: 348 INAHATSTRVGDPREFKAVMHCFGQNPE-LRMNSTKSMTGHLLGAAGAVEAIATVKAIQT 406
           INAH TST VGD  E  A+   FG + + L ++STKSM GHLLGAAGAVEAIATV+A+  
Sbjct: 298 INAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYH 357
Query: 407 GWIHPNINLENPDKDVDTRVLVGPKKERLD 436
           G I P INLE+PD ++D   +  P++ ++D
Sbjct: 358 GVIPPTINLEDPDPELDLDFVPEPREAKVD 387
>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 Back     alignment and structure
>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 Back     alignment and structure
>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 Back     alignment and structure
>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 Back     alignment and structure
>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 Back     alignment and structure
>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 Back     alignment and structure
>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 Back     alignment and structure
>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 Back     alignment and structure
>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 Back     alignment and structure
>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 Back     alignment and structure
>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 Back     alignment and structure
>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 Back     alignment and structure
>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 Back     alignment and structure
>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 Back     alignment and structure
>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 Back     alignment and structure
>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 Back     alignment and structure
>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 Back     alignment and structure
>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 Back     alignment and structure
>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 Back     alignment and structure
>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 Back     alignment and structure
>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 Back     alignment and structure
>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 Back     alignment and structure
>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 Back     alignment and structure
>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 Back     alignment and structure
>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 Back     alignment and structure
>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 Back     alignment and structure
>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 Back     alignment and structure
>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 Back     alignment and structure
>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 Back     alignment and structure
>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 Back     alignment and structure
>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 Back     alignment and structure
>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 Back     alignment and structure
>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 Back     alignment and structure
>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 Back     alignment and structure
>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 Back     alignment and structure
>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 Back     alignment and structure
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 Back     alignment and structure
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 Back     alignment and structure
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 Back     alignment and structure
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 Back     alignment and structure
>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 Back     alignment and structure
>pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Alpha Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 1878 Back     alignment and structure
>pdb|2PFF|A Chain A, Structural Insights Of Yeast Fatty Acid Synthase Length = 1688 Back     alignment and structure
>pdb|2UV8|A Chain A, Crystal Structure Of Yeast Fatty Acid Synthase With Stalled Acyl Carrier Protein At 3.1 Angstrom Resolution Length = 1887 Back     alignment and structure
>pdb|2VKZ|A Chain A, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid Synthase Type I Multienzyme Complex Length = 1887 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 0.0
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 0.0
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 0.0
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 0.0
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 0.0
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 0.0
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 0.0
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 0.0
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 0.0
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 0.0
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 0.0
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 0.0
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 0.0
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 1e-179
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 1e-176
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 1e-173
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 1e-173
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 1e-111
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 3e-63
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 1e-86
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 2e-44
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 2e-77
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 1e-45
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 1e-38
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 2e-27
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 3e-26
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 3e-26
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 Back     alignment and structure
 Score =  525 bits (1354), Expect = 0.0
 Identities = 157/419 (37%), Positives = 243/419 (57%), Gaps = 12/419 (2%)

Query: 48  KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGL 107
             RVVVTG+G V+PLG    L + +L+ G SG+ ++      EL  ++ G ++ +  D  
Sbjct: 23  TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPE 82

Query: 108 --------VPPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGS 159
                   VP K  ++ D ++  A++A  +ALA+AG       E  + R   ++ + +G 
Sbjct: 83  GGFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWA--PEAEQQRERTATVVASGIGG 140

Query: 160 MRALKDGIDAIKIS-YKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCI 218
              L + +   +    +++SPF++P+ ++++A+  I++   + GP     +ACA S   I
Sbjct: 141 FPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAI 200

Query: 219 LTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLS-RRNSDPTKASRPWDSDRDGF 277
             A   I  G+AD++L GG++       + GF A   LS   + +P +ASRP+D DRDGF
Sbjct: 201 GDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGF 260

Query: 278 VMGEGAGVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTN 337
           VMGEGA ++++E L+HA  RGA   AE +G   T DAYH +    DG GA+  M+ AL  
Sbjct: 261 VMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRM 320

Query: 338 SGVSREDVNYINAHATSTRVGDPREFKAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEA 397
             V+ E V+Y+NAHATST VGD  E +A+   FG      ++STKS TGHLLGAAGA+EA
Sbjct: 321 GDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEA 380

Query: 398 IATVKAIQTGWIHPNINLENPDKDVDTRVLVGPKKERLDIKVAMSNSFGFGGHNSSILF 456
             ++ A++ G +   +NLE+PD   D   L+GP    + +++A+SN FGFGG N+S+LF
Sbjct: 381 AFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLF 439
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query460
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 100.0
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 100.0
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 100.0
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 100.0
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 100.0
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 100.0
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 100.0
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 100.0
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 100.0
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 100.0
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 100.0
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 100.0
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 100.0
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 100.0
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 100.0
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 100.0
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 100.0
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 100.0
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 100.0
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 100.0
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 100.0
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 100.0
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 100.0
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 100.0
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 100.0
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 100.0
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 100.0
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 100.0
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 100.0
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 100.0
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 100.0
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 100.0
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 100.0
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.97
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.97
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 99.97
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 99.96
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 99.96
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 99.95
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 99.95
1u0m_A382 Putative polyketide synthase; type III polyketide 99.94
4egv_A520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.94
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 99.94
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 99.93
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 99.91
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 99.9
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 99.9
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 99.86
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 99.85
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.83
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 99.83
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 99.82
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 99.81
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 99.81
1xes_A413 Dihydropinosylvin synthase; native structure, tran 99.81
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 99.8
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 99.8
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 99.8
3awk_A402 Chalcone synthase-like polyketide synthase; type I 99.79
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 99.78
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 99.78
3oit_A387 OS07G0271500 protein; type III polyketide synthase 99.77
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.77
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 99.75
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 99.75
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 99.74
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 99.72
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 99.71
3v7i_A413 Putative polyketide synthase; type III polyketide 99.61
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 99.61
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 99.6
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.54
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 99.53
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 99.5
2wya_A 460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 99.35
4e1l_A 395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 82.99
4dd5_A 396 Acetyl-COA acetyltransferase; structural genomics, 82.25
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
Probab=100.00  E-value=2.5e-80  Score=624.55  Aligned_cols=405  Identities=32%  Similarity=0.490  Sum_probs=381.1

Q ss_pred             CCCceEEEecceecCCCCCHHHHHHHHHcCCCcceeCCCCCCC-CCCccccccccccccCCCCChHHhhhcCHHHHHHHH
Q 044824           47 VKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCS-ELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALI  125 (460)
Q Consensus        47 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~-~~~~~~~~~v~~fd~~~~i~~~~~~~~~~~~~l~l~  125 (460)
                      .|++|+|||||+++|.|.+.++||++|++|++++++++.|+.. .++.++.+.+++||+.+++++++.+.||++++|+++
T Consensus         4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~   83 (412)
T 4ewg_A            4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR   83 (412)
T ss_dssp             CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred             CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence            3578999999999999999999999999999999999988765 678888999999999999999999999999999999


Q ss_pred             HHHHHHHHcCC-CCcccCCcCCCcEEEEEeccCCchhHHHHHHHHH-HhhhccCCCCCccccccchHHHHHHHhhcCCcc
Q 044824          126 AGKKALADAGI-TEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAI-KISYKKMSPFSVPYSMTSMASAIIAMDLEWMGP  203 (460)
Q Consensus       126 a~~~Al~dAGl-~~~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp  203 (460)
                      ++++||+|||+ +++   +++..++||++|++.+++...+++++.+ ..+...++|+.++....+..+.++++.||++||
T Consensus        84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp  160 (412)
T 4ewg_A           84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR  160 (412)
T ss_dssp             HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence            99999999999 554   4567899999999999999988888877 667778899999999999999999999999999


Q ss_pred             eeecCCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcChHHHHHHHhcccccccCCCCCCCCCCCCCCCCCcccccee
Q 044824          204 NYAISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGA  283 (460)
Q Consensus       204 ~~~v~~acaS~~~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGa  283 (460)
                      +++|+++|+|++.||.+|+++|++|+||++||||+|. +++.....|..++.++....+|+..|||||.+++|+++|||+
T Consensus       161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGA  239 (412)
T 4ewg_A          161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA  239 (412)
T ss_dssp             EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEE
T ss_pred             cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeE
Confidence            9999999999999999999999999999999999999 889999999999999987778889999999999999999999


Q ss_pred             EEEEEeccHHHHhcCCeeEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHH
Q 044824          284 GVILLEELEHAKRRGAEIYAEFMGGSFTCDAYHKSESRLDGLGAVACMEKALTNSGVSREDVNYINAHATSTRVGDPREF  363 (460)
Q Consensus       284 aalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~~~~al~~Agl~~~dId~v~~h~tgt~~~D~~E~  363 (460)
                      +++||+++++|+++|++||++|+|++.++|+++.+.|  .+.++.++++++|++||++|+||||||+|||||+.+|..|.
T Consensus       240 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~  317 (412)
T 4ewg_A          240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAES  317 (412)
T ss_dssp             EEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHH
T ss_pred             EEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHH
Confidence            9999999999999999999999999999999987765  67889999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCccccccccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CcccccCCcccccCCcEEEE
Q 044824          364 KAVMHCFGQNPELRMNSTKSMTGHLLGAAGAVEAIATVKAIQTGWIHPNINLENPDKDV-DTRVLVGPKKERLDIKVAMS  442 (460)
Q Consensus       364 ~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~  442 (460)
                      +++.++|+..  ++|++.|+++||++||||++++++++++|+++++||++|+++|+|.+ ++++ ++.+.++++++++++
T Consensus       318 ~al~~~~~~~--~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~-v~~~~~~~~~~~~~~  394 (412)
T 4ewg_A          318 QATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDY-IRGEARAIDAEYVMS  394 (412)
T ss_dssp             HHHHHHHCTT--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEE-CCSSCEECCCSEEEE
T ss_pred             HHHHHHcCCC--CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccc-ccCcccCCCCCEEEE
Confidence            9999999864  88999999999999999999999999999999999999999999999 7886 777788889999999


Q ss_pred             EcccccceeeeEEEeecC
Q 044824          443 NSFGFGGHNSSILFAVHK  460 (460)
Q Consensus       443 ~s~g~gG~~~~~il~~~~  460 (460)
                      |||||||+|+|+||++++
T Consensus       395 ~sfgfGG~na~~vl~~~~  412 (412)
T 4ewg_A          395 NNFAFGGINTSLIFRRVR  412 (412)
T ss_dssp             EEEEGGGEEEEEEEECCC
T ss_pred             eeecCCcceEEEEEeeCC
Confidence            999999999999999985
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 460
d1j3na1249 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { 2e-66
d2gfva1250 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { 1e-62
d1e5ma1250 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { 5e-58
d1ox0a1256 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II 5e-53
d2vbaa1253 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E 5e-50
d2ix4a1270 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II 1e-47
d1tqya2205 c.95.1.1 (A:219-423) Actinorhodin polyketide putat 1e-44
d2ix4a2161 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II 2e-38
d1tqyb2194 c.95.1.1 (B:210-403) Actinorhodin polyketide putat 2e-37
d1e5ma2161 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II 3e-33
d2gfva2161 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II 3e-32
d1j3na2159 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II 3e-30
d2vbaa2151 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I 4e-29
d1tqya1216 c.95.1.1 (A:3-218) Actinorhodin polyketide putativ 5e-29
d1ox0a2158 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II 1e-28
d1tqyb1208 c.95.1.1 (B:2-209) Actinorhodin polyketide putativ 3e-23
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  211 bits (538), Expect = 2e-66
 Identities = 110/252 (43%), Positives = 148/252 (58%), Gaps = 5/252 (1%)

Query: 49  RRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLV 108
           RRVVVTGLGA+TP+G     F+   L G SG+  I  FD S LP RIA E+        +
Sbjct: 2   RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAY-L 60

Query: 109 PPKHAKRADNYLIYALIAGKKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGID 168
             K  +R D ++ YALIA + AL DAG+  +   +L+  R G L+GT +G M   +    
Sbjct: 61  DRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117

Query: 169 AI-KISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYAISSACATSNCCILTAANHIIK 227
              +    ++SPF +P  + +MASA IAM   + GP+  + +ACAT    + +A   I  
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177

Query: 228 GDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVIL 287
           G+ADL+L GG++  I P  I  F     LS RN +P KASRP+   RDGFVMGEGAGV++
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237

Query: 288 LEELEHAKRRGA 299
           LE  EHAK+RGA
Sbjct: 238 LEAYEHAKKRGA 249
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 Back     information, alignment and structure
>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 Back     information, alignment and structure
>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 Back     information, alignment and structure
>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 Back     information, alignment and structure
>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 Back     information, alignment and structure
>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 Back     information, alignment and structure
>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 Back     information, alignment and structure
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query460
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 100.0
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 100.0
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 100.0
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 100.0
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 100.0
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 100.0
d1e5ma2161 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 100.0
d1ox0a2158 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 100.0
d2gfva2161 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 100.0
d1j3na2159 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 100.0
d2ix4a2161 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 100.0
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d2vbaa2151 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 100.0
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 99.7
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.45
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.43
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.42
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.41
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 99.35
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 99.29
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 99.22
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.21
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 99.19
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 99.19
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 99.09
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 99.07
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 99.05
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.04
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 99.02
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 97.37
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 96.97
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 96.73
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 96.32
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 95.44
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 94.33
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 94.24
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 92.77
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 85.29
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 80.59
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 80.42
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-49  Score=368.87  Aligned_cols=249  Identities=40%  Similarity=0.707  Sum_probs=234.9

Q ss_pred             CCceEEEecceecCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccccccCCCCChHHhhhcCHHHHHHHHHH
Q 044824           48 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAG  127 (460)
Q Consensus        48 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~~~~~~l~l~a~  127 (460)
                      ++||||||||+++|+|.+.++||++|.+|+++++++++|+...++..+++.+++|+....+++++.+++++++++++.++
T Consensus         1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa   80 (250)
T d2gfva1           1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG   80 (250)
T ss_dssp             CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred             CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999999999999888889999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCcCCCcEEEEEeccCCchhHHHHHHHHH-HhhhccCCCCCccccccchHHHHHHHhhcCCcceee
Q 044824          128 KKALADAGITEQVSGELNKNRCGVLIGTAMGSMRALKDGIDAI-KISYKKMSPFSVPYSMTSMASAIIAMDLEWMGPNYA  206 (460)
Q Consensus       128 ~~Al~dAGl~~~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~  206 (460)
                      .+||+|||+..+   +.++.++||++|++.++....+..+..+ ......++|..++..+.+.++++|++.||++||+++
T Consensus        81 ~~Al~dAg~~~~---~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t  157 (250)
T d2gfva1          81 VQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS  157 (250)
T ss_dssp             HHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred             HHHHHhcCCCcc---ccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence            999999999865   5567899999999999988888777776 667788999999999999999999999999999999


Q ss_pred             cCCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcChHHHHHHHhcccccccCCCCCCCCCCCCCCCCCccccceeEEE
Q 044824          207 ISSACATSNCCILTAANHIIKGDADLMLCGGSDGVIIPEGIAGFIACNNLSRRNSDPTKASRPWDSDRDGFVMGEGAGVI  286 (460)
Q Consensus       207 v~~acaS~~~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal  286 (460)
                      |+++|+|++.||.+|+++|++|++|++||||+|..++|..+..|..++.|+..+.+|+..|||||++++|+++|||++++
T Consensus       158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGaa~l  237 (250)
T d2gfva1         158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML  237 (250)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEEE
T ss_pred             cccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEEEEE
Confidence            99999999999999999999999999999999999999999999999999988777888999999999999999999999


Q ss_pred             EEeccHHHHhcCC
Q 044824          287 LLEELEHAKRRGA  299 (460)
Q Consensus       287 vL~~~~~A~~~g~  299 (460)
                      |||++++|++||+
T Consensus       238 VLE~~~~A~~rGA  250 (250)
T d2gfva1         238 VLEEYEHAKKRGA  250 (250)
T ss_dssp             EEEEHHHHHHHTC
T ss_pred             EECcHHHHHHCcC
Confidence            9999999999985
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure