Citrus Sinensis ID: 044828

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
QHKIFSLSFLPLFPKKQTPLLFFSLVSLSYFTLTDTAQSKMNNNNNNNMNVNLSSSSSSSNSINMDHSAWLGFSLSNNNLQTSSTSDPESSHICLFEAFTTAATATTASGSNINLARGRGGEATGIASATDLSIFTGSPKLEDFLGGSCTATPPQPPQVQLGHHHLSSATTAHEIYDSELKTIAASFLRGFATEQTDSHHQQQQQQHLKHHHQQQQQLVPLVAQPAPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGKYSGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELEDMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGITGKSKNSSESVSDCKSLDGGSRSDDRDISSASSHLAAFASSHPATSTLSFALPIKQDPSADYWSNLLGYQNNTTATPLTNAKSLSIAPTYLQSPTSSPSFNVDFAANPSSGVNESSNNGLFNVGNYLQQQQQQQQGGVSNSTTTTTTSAHTGSSNIPFATPIGLNSNSYESWISPSLHSFQTAKPSLSVFQTPIFGME
ccccEEcccccccccccccccEEEccEEEccccccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEccccccEEEEEcccccccccccccccEEEccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEECccccccccEEEEccccccEEcccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
**KIFSLSFLPLFPKKQTPLLFFSLVSLSYFTLT***********************************WL********************HICLFEAFTTAATATTASGSNI**********TGIASATDLSIFTGSPKLEDFLG************************TAHEIYDSELKTIAASFLRGF********************************************QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGKYSGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELEDMKNM******************GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPI****************************************************FALPIK***SADYWSNLLGYQNNTTAT**********************************************************************************************SWI*********AKPSLSVFQTPIFGM*
xxxxxxxxxxxxxxxxxHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
QHKIFSLSFLPLFPKKQTPLLFFSLVSLSYFTLTDTAQSKMNNNNNNNMNVNLSSSSSSSNSINMDHSAWLGFSLSNNNLQTSSTSDPESSHICLFEAFTTAATATTASGSNINLARGRGGEATGIASATDLSIFTGSPKLEDFLGGSCTATPPQPPQVQLGHHHLSSATTAHEIYDSELKTIAASFLRGFATEQTDSHHQQQQQQHLKHHHQQQQQLVPLVAQPAPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGKYSGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELEDMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGITGKSKNSSESVSDCKSLDGGSRSDDRDISSASSHLAAFASSHPATSTLSFALPIKQDPSADYWSNLLGYQNNTTATPLTNAKSLSIAPTYLQSPTSSPSFNVDFAANPSSGVNESSNNGLFNVGNYLQQQQQQQQGGVSNSTTTTTTSAHTGSSNIPFATPIGLNSNSYESWISPSLHSFQTAKPSLSVFQTPIFGME

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
AP2-like ethylene-responsive transcription factor AIL5 Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size.probableQ6PQQ3

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GCC, chain A
Confidence level:very confident
Coverage over the Query: 240-308
View the alignment between query and template
View the model in PyMOL
Template: 1GCC, chain A
Confidence level:very confident
Coverage over the Query: 342-402
View the alignment between query and template
View the model in PyMOL
Template: 1U3E, chain M
Confidence level:probable
Coverage over the Query: 310-384
View the alignment between query and template
View the model in PyMOL