Citrus Sinensis ID: 045080

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---

MHTTFPPLSSSPSPSFQSSPSINASPSKSSPNLAAPPPIVLSPCAACKSLRRRCDEKCVLAPYFPPTEPQNFIIVHRVFGASNIIKCLQGLPECQRSDAVSSMVYEANARIRNPVHGCAGAISQLQKQVIKLQAELAKAQAETVSMQCQRDNLVALICKEMTTQFPQETMNRVLPQQQFNDDDATTCYLDDKDFASTWDALWT

ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccc

****************************************LSPCAACKSLRRRCDEKCVLAPYFPPTEPQNFIIVHRVFGASNIIKCLQGLPECQRSDAVSSMVYEANARIRNPVHGCAGAISQLQKQVIKLQAELAKAQAETVSMQCQRDNLVALICKEMT**********************TTCYLDDKDFASTWDALWT

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MHTTFPPLSSSPSPSFQSSPSINASPSKSSPNLAAPPPIVLSPCAACKSLRRRCDEKCVLAPYFPPTEPQNFIIVHRVFGASNIIKCLQGLPECQRSDAVSSMVYEANARIRNPVHGCAGAxxxxxxxxxxxxxxxxxxxxxTVSMQCQRDNLVALICKEMTTQFPQETMNRVLPQQQFNDDDATTCYLDDKDFASTWDALWT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
LOB domain-containing protein 1		probable	Q9LQR0

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4DZN, chain A
Confidence level:probable
Coverage over the Query: 120-125
View the alignment between query and template
View the model in PyMOL