Citrus Sinensis ID: 045117

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
IQQAKVLTRYLKALFKSLLRELLCHLTMKNLFFSMVFMVSLIFFLANVSEAAIACGTVDAKAAACVGFATGKAPTPTSACCSGLQQLAQSVKTVDDKKAICRCLKAGAKSLGVQDRFLSKIPSACGIKVGFPVSTATNCETIH
cHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccccHHHHccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccc
*****VLTRYLKALFKSLLRELLCHLTMKNLFFSMVFMVSLIFFLANVSEAAIACGTVDAKAAACVGFATGKAPTPTSACCSGLQQLAQSVKTVDDKKAICRCLKAGAKSLGVQDRFLSKIPSACGIKVGFPVSTATNCETI*
xxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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IQQAKVLTRYLKALFKSLLRELLCHLTMKNLFFSMVFMVSLIFFLANVSEAAIACGTVDAKAAACVGFATGKAPTPTSACCSGLQQLAQSVKTVDDKKAICRCLKAGAKSLGVQDRFLSKIPSACGIKVGFPVSTATNCETIH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Non-specific lipid-transfer protein C, cotyledon-specific isoform Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.probableP10975
Non-specific lipid-transfer protein D, cotyledon-specific isoform Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.probableQ43119

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1SIY, chain A
Confidence level:very confident
Coverage over the Query: 53-143
View the alignment between query and template
View the model in PyMOL