Citrus Sinensis ID: 045189

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVLIAAAITGLLILRRRKKKER
cHHHHHHHHHHHHcccccEEEEEEccccccccccEEEccEEEccccEEEcccccccccEEEEEEcccEEEEccccccEEEEEEEEEEEEEccccccccccEEEEEEEccccccccccccccccccccccccccccEEEEEEEccccccccccccccccEEcccccccccEEEcccEEccccEEEEEEEEEccccEEEEEEEEcccccccccccEEEEcccccccccEEEEEEEcccccccccEEEEEEEEEccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHEHHHHccc
cHHHHHHHHHHHHHccccccEEEEcccccccccEEEcccEEccccEEEEEccccccccEEEEEEcccEEcEccccccEcEEEEEEEEEEEEccccEcccEEEEEEEEcccccccccccHHcccccccccccHHHccEEEEEEccccccccccccccEEEEEEccccccEEEEcccEEccccEEEEEEEEccccEEEEEEEEccccccccccEEEEEEccHHHccccEEEEEEEEEEcccccEEEEEEEEEEEEEccccccccEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MINITLFIFIVVLVpsansvsfrmssfdpngkdiiyqgdavpsvgVIELINRYQYVCRVGwatyadrvplwdsdtgeltdfstkfsfqidtqsrptyghglvfflapagfqippnsaggflglfntttsfsssnhivhvefdtyfnrewdpsgvqdhvginnnSIASAVHTrwnasfhsedtADVRIAYNSTTKNLSVSWTyrqtsdprentslFYIIDLTKVLPQWVTIGFSaatsqfgerhileswefsssldikstngtdgkkiRIIVGVTVSIGVLIAAAITGLLILRRRKKKER
MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYnsttknlsvswtyrqtsdprenTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFsssldikstngtdgkkirIIVGVTVSIGVLIAAaitgllilrrrkkker
MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAggflglfntttsfsssnHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVliaaaitgllilrrrkkkER
*INITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVLIAAAITGLLI*********
MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGF******AGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGIN**SIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWE*******************IIVGVTVSIGVLIAAAITGLLILRRRKKK**
MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVLIAAAITGLLILRRRKKKER
MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVLIAAAITGLLILRRRKKK**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MINITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVLIAAAITGLLILRRRKKKER
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query299 2.2.26 [Sep-21-2011]
Q9LXA5 651 L-type lectin-domain cont yes no 0.983 0.451 0.525 4e-79
Q9LSL5 675 L-type lectin-domain cont no no 0.923 0.408 0.468 8e-60
Q39529290 Agglutinin-2 OS=Cladrasti N/A no 0.812 0.837 0.411 2e-40
Q93WH6275 Lectin OS=Lens culinaris N/A no 0.802 0.872 0.373 4e-38
Q93X49275 Lectin OS=Lens culinaris N/A no 0.802 0.872 0.369 8e-38
Q8VXF2275 Lectin OS=Lens culinaris N/A no 0.802 0.872 0.369 1e-37
P02870275 Lectin OS=Lens culinaris N/A no 0.802 0.872 0.369 3e-37
P22970244 Anti-H(O) lectin 1 OS=Cyt N/A no 0.755 0.926 0.394 3e-36
Q41161285 Seed agglutinin 2 OS=Robi N/A no 0.789 0.828 0.413 7e-36
P22973249 Anti-H(O) lectin 2 OS=Ule N/A no 0.772 0.927 0.401 8e-36
>sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1 Back     alignment and function desciption
 Score =  295 bits (754), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/299 (52%), Positives = 207/299 (69%), Gaps = 5/299 (1%)

Query: 3   NITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWA 62
           +I LF F++VL P   SV F +S F  +  +I YQGDA  + G +EL N   Y CR GWA
Sbjct: 4   SILLFSFVLVL-PFVCSVQFNISRFGSDVSEIAYQGDARAN-GAVELTN-IDYTCRAGWA 60

Query: 63  TYADRVPLWDSDTGELTDFSTKFSFQIDTQS--RPTYGHGLVFFLAPAGFQIPPNSAGGF 120
           TY  +VPLW+  T + +DFST+FSF+IDT++     YGHG  FFLAPA  Q+PPNSAGGF
Sbjct: 61  TYGKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGF 120

Query: 121 LGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSE 180
           LGLFN T + SS+  +V+VEFDT+ N EWDP  V+ HVGINNNS+ S+ +T WNA+ H++
Sbjct: 121 LGLFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQ 180

Query: 181 DTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFG 240
           D   V I Y+S  +NLSVSWTY  TSDP EN+SL YIIDL+KVLP  VTIGFSA +    
Sbjct: 181 DIGRVLIFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVT 240

Query: 241 ERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVSIGVLIAAAITGLLILRRRKKKER 299
           E + L SWEFSSSL++     +   K  +I+G++VS  VL+   IT L++  +RK++++
Sbjct: 241 EGNRLLSWEFSSSLELIDIKKSQNDKKGMIIGISVSGFVLLTFFITSLIVFLKRKQQKK 299

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q9LSL5|LRK92_ARATH L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana GN=LECRK92 PE=2 SV=1 Back     alignment and function description
>sp|Q39529|LEC2_CLAKE Agglutinin-2 OS=Cladrastis kentukea PE=1 SV=1 Back     alignment and function description
>sp|Q93WH6|LEC_LENCC Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=2 Back     alignment and function description
>sp|Q93X49|LEC_LENCO Lectin OS=Lens culinaris subsp. orientalis PE=3 SV=2 Back     alignment and function description
>sp|Q8VXF2|LEC_LENCT Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV=2 Back     alignment and function description
>sp|P02870|LEC_LENCU Lectin OS=Lens culinaris PE=1 SV=2 Back     alignment and function description
>sp|P22970|LEC1_CYTSE Anti-H(O) lectin 1 OS=Cytisus sessilifolius PE=1 SV=2 Back     alignment and function description
>sp|Q41161|LCS2_ROBPS Seed agglutinin 2 OS=Robinia pseudoacacia PE=1 SV=1 Back     alignment and function description
>sp|P22973|LEC2_ULEEU Anti-H(O) lectin 2 OS=Ulex europaeus PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
255572593 672 kinase, putative [Ricinus communis] gi|2 0.939 0.418 0.656 1e-101
255572599 652 kinase, putative [Ricinus communis] gi|2 0.983 0.450 0.604 7e-99
224074307 651 predicted protein [Populus trichocarpa] 0.936 0.430 0.596 1e-90
357517119 651 Wall-associated receptor kinase-like pro 0.963 0.442 0.540 2e-82
357517145 651 Cysteine-rich receptor-like protein kina 0.963 0.442 0.540 2e-82
449460754 688 PREDICTED: L-type lectin-domain containi 0.939 0.408 0.550 1e-81
449531003 659 PREDICTED: LOW QUALITY PROTEIN: L-type l 0.939 0.426 0.546 4e-81
297736692255 unnamed protein product [Vitis vinifera] 0.806 0.945 0.640 6e-81
15238190 651 concanavalin A-like lectin kinase-like p 0.983 0.451 0.525 2e-77
255566153 633 kinase, putative [Ricinus communis] gi|2 0.969 0.458 0.510 8e-77
>gi|255572593|ref|XP_002527230.1| kinase, putative [Ricinus communis] gi|223533406|gb|EEF35156.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/285 (65%), Positives = 222/285 (77%), Gaps = 4/285 (1%)

Query: 15  PSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWATYADRVPLWDSD 74
           P ANSV+F +  F+    +I YQGDA PSVG +ELI++  Y+CRVGW TY + VPLWDS 
Sbjct: 40  PPANSVNFTIPRFNNEASNIQYQGDAAPSVGAVELISQLAYLCRVGWVTYGESVPLWDST 99

Query: 75  TGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSN 134
           TG+L+DFST FSF IDTQ R TYGHG+VFFLAP GFQIPPNSAGGFLGLFNT+TS SS N
Sbjct: 100 TGKLSDFSTHFSFIIDTQGRSTYGHGIVFFLAPVGFQIPPNSAGGFLGLFNTSTSDSSKN 159

Query: 135 HIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNSTTK 194
            IV VEFD++ N EWDP     HVGINNNSIASAV+T WNASFHS D AD  I YNS TK
Sbjct: 160 QIVTVEFDSFSNEEWDPP--VGHVGINNNSIASAVYTPWNASFHSGDIADAWITYNSITK 217

Query: 195 NLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSL 254
           NLSV WTY++TS+P EN+SL YIIDL KVLP+ VTIGFSAAT Q G RH L+SWEFSSSL
Sbjct: 218 NLSVFWTYKETSNPGENSSLSYIIDLMKVLPEQVTIGFSAATGQNGARHSLQSWEFSSSL 277

Query: 255 DIKSTNGTDGKKIRIIVGVTVSIG--VLIAAAITGLLILRRRKKK 297
            +K  +G + KK ++IVGV+ S+   +LIAAA+   L++ RR+K+
Sbjct: 278 VVKGKHGNELKKTQVIVGVSASVSGCLLIAAAVILALVISRRRKQ 322

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255572599|ref|XP_002527233.1| kinase, putative [Ricinus communis] gi|223533409|gb|EEF35159.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224074307|ref|XP_002304348.1| predicted protein [Populus trichocarpa] gi|222841780|gb|EEE79327.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357517119|ref|XP_003628848.1| Wall-associated receptor kinase-like protein [Medicago truncatula] gi|355522870|gb|AET03324.1| Wall-associated receptor kinase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357517145|ref|XP_003628861.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355522883|gb|AET03337.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449460754|ref|XP_004148110.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449531003|ref|XP_004172477.1| PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297736692|emb|CBI25709.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15238190|ref|NP_196615.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] gi|75335609|sp|Q9LXA5.1|LRK91_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IX.1; Short=LecRK-IX.1; Flags: Precursor gi|7671450|emb|CAB89390.1| lectin-like protein kinase-like [Arabidopsis thaliana] gi|91806848|gb|ABE66151.1| lectin protein kinase [Arabidopsis thaliana] gi|332004177|gb|AED91560.1| concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255566153|ref|XP_002524064.1| kinase, putative [Ricinus communis] gi|223536632|gb|EEF38274.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
TAIR|locus:2142499 651 AT5G10530 [Arabidopsis thalian 0.906 0.416 0.503 4.5e-66
TAIR|locus:2155685 675 AT5G65600 [Arabidopsis thalian 0.882 0.391 0.460 5.1e-58
UNIPROTKB|P02870275 P02870 "Lectin" [Lens culinari 0.799 0.869 0.351 6.7e-33
UNIPROTKB|Q40987270 NLEC1 "Nodule lectin" [Pisum s 0.779 0.862 0.372 1.9e-28
UNIPROTKB|Q70DJ5280 Q70DJ5 "Alpha-methyl-mannoside 0.806 0.860 0.307 2.8e-27
UNIPROTKB|P42088240 P42088 "Lectin" [Leucomphalos 0.755 0.941 0.333 3.3e-24
UNIPROTKB|P02866290 P02866 "Concanavalin-A" [Canav 0.802 0.827 0.307 4.3e-22
UNIPROTKB|P14894290 P14894 "Concanavalin-A" [Canav 0.802 0.827 0.304 1.9e-21
TAIR|locus:2084375 677 AT3G53810 [Arabidopsis thalian 0.812 0.358 0.288 3.7e-19
TAIR|locus:2133229 674 LPK1 "lectin-like protein kina 0.802 0.356 0.296 5.6e-18
TAIR|locus:2142499 AT5G10530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 139/276 (50%), Positives = 179/276 (64%)

Query:     3 NITLFIFIVVLVPSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQYVCRVGWA 62
             +I LF F++VL P   SV F +S F  +  +I YQGDA  + G +EL N   Y CR GWA
Sbjct:     4 SILLFSFVLVL-PFVCSVQFNISRFGSDVSEIAYQGDARAN-GAVELTN-IDYTCRAGWA 60

Query:    63 TYADRVPLWDSDTGELTDFSTKFSFQIDTQS--RPTYGHGLVFFLAPAGFQIPPNSAXXX 120
             TY  +VPLW+  T + +DFST+FSF+IDT++     YGHG  FFLAPA  Q+PPNSA   
Sbjct:    61 TYGKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGF 120

Query:   121 XXXXXXXXXXXXXXHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSE 180
                            +V+VEFDT+ N EWDP  V+ HVGINNNS+ S+ +T WNA+ H++
Sbjct:   121 LGLFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQ 180

Query:   181 DTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFG 240
             D   V I Y+S  +NLSVSWTY  TSDP EN+SL YIIDL+KVLP  VTIGFSA +    
Sbjct:   181 DIGRVLIFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVT 240

Query:   241 ERHILESWEFSSSLDIKSTNGTDGKKIRIIVGVTVS 276
             E + L SWEFSSSL++     +   K  +I+G++VS
Sbjct:   241 EGNRLLSWEFSSSLELIDIKKSQNDKKGMIIGISVS 276
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
TAIR|locus:2155685 AT5G65600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P02870 P02870 "Lectin" [Lens culinaris (taxid:3864)] Back     alignment and assigned GO terms
UNIPROTKB|Q40987 NLEC1 "Nodule lectin" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
UNIPROTKB|Q70DJ5 Q70DJ5 "Alpha-methyl-mannoside-specific lectin" [Arachis hypogaea (taxid:3818)] Back     alignment and assigned GO terms
UNIPROTKB|P42088 P42088 "Lectin" [Leucomphalos mildbraedii (taxid:28956)] Back     alignment and assigned GO terms
UNIPROTKB|P02866 P02866 "Concanavalin-A" [Canavalia ensiformis (taxid:3823)] Back     alignment and assigned GO terms
UNIPROTKB|P14894 P14894 "Concanavalin-A" [Canavalia gladiata (taxid:3824)] Back     alignment and assigned GO terms
TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
cd06899236 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume 2e-82
pfam00139231 pfam00139, Lectin_legB, Legume lectin domain 2e-61
cd01951223 cd01951, lectin_L-type, legume lectins 1e-18
pfam0869340 pfam08693, SKG6, Transmembrane alpha-helix domain 0.004
cd07308218 cd07308, lectin_leg-like, legume-like lectins: ERG 0.004
>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
 Score =  247 bits (634), Expect = 2e-82
 Identities = 101/240 (42%), Positives = 138/240 (57%), Gaps = 9/240 (3%)

Query: 20  VSFRMSSFDPNGKDIIYQGDA-VPSVGVIELINRYQYVCRVGWATYADRVPLWDSDTGEL 78
           +SF  + F  +  ++  QGDA + S G ++L N       VG A Y+  V LWDS TG++
Sbjct: 1   LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKV 60

Query: 79  TDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVH 138
             FST FSF I   +    G GL FFLAP     PP S+GG+LGLFN++ + +SSNHIV 
Sbjct: 61  ASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSL-PPASSGGYLGLFNSSNNGNSSNHIVA 119

Query: 139 VEFDTYFNREW-DPSGVQDHVGINNNSIASAVHTRWNAS---FHSEDTADVRIAYNSTTK 194
           VEFDT+ N E+ DP    +HVGI+ NS+ S     W+       S       I Y+S++K
Sbjct: 120 VEFDTFQNPEFGDPDD--NHVGIDVNSLVSVKAGYWDDDGGKLKSGKPMQAWIDYDSSSK 177

Query: 195 NLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSSL 254
            LSV+  Y   + P +   L Y +DL+KVLP+ V +GFSA+T    E H + SW FSS+ 
Sbjct: 178 RLSVTLAYSGVAKP-KKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSNG 236

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236
>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain Back     alignment and domain information
>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins Back     alignment and domain information
>gnl|CDD|149674 pfam08693, SKG6, Transmembrane alpha-helix domain Back     alignment and domain information
>gnl|CDD|173892 cd07308, lectin_leg-like, legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 299
cd06899236 lectin_legume_LecRK_Arcelin_ConA legume lectins, l 100.0
PF00139236 Lectin_legB: Legume lectin domain; InterPro: IPR00 100.0
cd01951223 lectin_L-type legume lectins. The L-type (legume-t 100.0
cd07308218 lectin_leg-like legume-like lectins: ERGIC-53, ERG 99.95
cd06901248 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr 99.89
cd06902225 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran 99.88
PF03388229 Lectin_leg-like: Legume-like lectin family; InterP 99.79
cd06903215 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem 99.78
KOG3839351 consensus Lectin VIP36, involved in the transport 99.63
KOG3838 497 consensus Mannose lectin ERGIC-53, involved in gly 99.58
cd06900255 lectin_VcfQ VcfQ bacterial pilus biogenesis protei 99.19
PF0869340 SKG6: Transmembrane alpha-helix domain; InterPro: 95.64
PF15065350 NCU-G1: Lysosomal transcription factor, NCU-G1 94.64
PF04478154 Mid2: Mid2 like cell wall stress sensor; InterPro: 92.54
PTZ0038296 Variant-specific surface protein (VSP); Provisiona 88.77
PF06697278 DUF1191: Protein of unknown function (DUF1191); In 86.06
KOG3514 1591 consensus Neurexin III-alpha [Signal transduction 85.66
PF15102146 TMEM154: TMEM154 protein family 85.42
>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information 
Probab=100.00  E-value=5.9e-59  Score=420.53  Aligned_cols=230  Identities=43%  Similarity=0.707  Sum_probs=206.8

Q ss_pred             eeEEeCCCCCCCCCeEEecceeee-cCeEEeccCCCccceEEEEEeCCCeeccCCCCCCceeeEEEEEEEEecCCCCCCC
Q 045189           20 VSFRMSSFDPNGKDIIYQGDAVPS-VGVIELINRYQYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQSRPTYG   98 (299)
Q Consensus        20 ~sF~f~~F~~~~~~l~l~G~A~~~-~g~i~LT~~~~~~~~~Gra~y~~Pi~l~d~~t~~~asFst~F~F~I~~~~~~~~g   98 (299)
                      ++|+|++|..+..+|.++|+|.+. ++.|+||++.+..+++|||||++||+||++.+++++||+|+|+|+|.+.....+|
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~g   80 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLGG   80 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCCC
Confidence            479999998545789999999998 7999999982117899999999999999999999999999999999987666799


Q ss_pred             cceEEEEccCCCCCCCCCCCCccccccCCCCCCCCCcEEEEEEeCccCCC-CCCCCCCCcEEEEcCCCcceeeeeccc--
Q 045189           99 HGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNRE-WDPSGVQDHVGINNNSIASAVHTRWNA--  175 (299)
Q Consensus        99 dGlAF~l~p~~~~~~~~~~G~~LGl~n~~~~~~~~~~~vAVEFDT~~n~~-~Dp~~~~nHVgI~ins~~S~~~~~~~~--  175 (299)
                      |||||+|+|.... +.+..|++|||++.+++++..++.|||||||++|++ +||+.  +||||++|++.|..+..|..  
T Consensus        81 dGlAF~i~~~~~~-~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~--nHigIdvn~~~S~~~~~~~~~~  157 (236)
T cd06899          81 DGLAFFLAPTDSL-PPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDD--NHVGIDVNSLVSVKAGYWDDDG  157 (236)
T ss_pred             CeEEEEEecCCCC-CCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCC--CeEEEEcCCcccceeecccccc
Confidence            9999999997743 346889999999887666678999999999999987 69999  99999999998888777653  


Q ss_pred             -ccCCCCeeEEEEEEeCCCCeEEEEEeecCCCCCCCceeEEEEeccCcccCceeEEEEEeecCCcccceEEEEEEEEec
Q 045189          176 -SFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQFGERHILESWEFSSS  253 (299)
Q Consensus       176 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~~p~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~IlsWsF~s~  253 (299)
                       .+.+|+.++|||+||+.+++|+|+|++... .+|..|++++.+||+.+|+++|||||||+||...|.|+|++|+|+++
T Consensus       158 ~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~-~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWsF~s~  235 (236)
T cd06899         158 GKLKSGKPMQAWIDYDSSSKRLSVTLAYSGV-AKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSN  235 (236)
T ss_pred             ccccCCCeEEEEEEEcCCCCEEEEEEEeCCC-CCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEEEEcC
Confidence             368999999999999999999999998765 47889999999999999999999999999999999999999999986

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin
>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported Back     alignment and domain information
>cd01951 lectin_L-type legume lectins Back     alignment and domain information
>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information
>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain Back     alignment and domain information
>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates Back     alignment and domain information
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain Back     alignment and domain information
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ] Back     alignment and domain information
>PF15065 NCU-G1: Lysosomal transcription factor, NCU-G1 Back     alignment and domain information
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region Back     alignment and domain information
>PTZ00382 Variant-specific surface protein (VSP); Provisional Back     alignment and domain information
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function Back     alignment and domain information
>KOG3514 consensus Neurexin III-alpha [Signal transduction mechanisms] Back     alignment and domain information
>PF15102 TMEM154: TMEM154 protein family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
1qnw_A242 Lectin Ii From Ulex Europaeus Length = 242 2e-30
2bqp_A234 The Structure Of The Pea Lectin-D-Glucopyranose Com 4e-28
1fny_A237 Legume Lectin Of The Bark Of Robinia Pseudoacacia. 1e-27
1bzw_A232 Peanut Lectin Complexed With C-Lactose Length = 232 1e-27
2pel_A236 Peanut Lectin Length = 236 1e-27
3ujo_A281 Galactose-Specific Seed Lectin From Dolichos Lablab 2e-27
3ipv_A251 Crystal Structure Of Spatholobus Parviflorus Seed L 5e-27
3usu_A256 Crystal Structure Of Butea Monosperma Seed Lectin L 9e-27
3usu_B242 Crystal Structure Of Butea Monosperma Seed Lectin L 1e-26
3zvx_A261 Structure Of The Lectin From Platypodium Elegans In 3e-26
3ipv_B239 Crystal Structure Of Spatholobus Parviflorus Seed L 3e-26
1fat_A252 Phytohemagglutinin-L Length = 252 2e-25
2eig_A234 Lotus Tetragonolobus Seed Lectin (Isoform) Length = 4e-25
1dbn_A239 Maackia Amurensis Leukoagglutinin (Lectin) With Sia 6e-25
1g8w_A233 Improved Structure Of Phytohemagglutinin-L From The 7e-25
1fx5_A242 Crystal Structure Analysis Of Ulex Europaeus Lectin 2e-24
2sba_A253 Soybean Agglutinin Complexed With 2,6-Pentasacchari 2e-24
2fmd_A240 Structural Basis Of Carbohydrate Recognition By Bow 6e-24
1n3o_A252 Pterocarcpus Angolensis Lectin In Complex With Alph 6e-24
1q8o_A252 Pterocartpus Angolensis Lectin Pal In Complex With 7e-24
1gsl_A243 Lectin (Fourth Isolated From (Griffonia Simplicifol 3e-23
1hql_A257 The Xenograft Antigen In Complex With The B4 Isolec 1e-22
2lal_A181 Crystal Structure Determination And Refinement At 2 1e-22
1gnz_A257 Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m 1e-22
1bjq_A253 The Dolichos Biflorus Seed Lectin In Complex With A 1e-21
1wbf_A242 Winged Bean Lectin, Saccharide Free Form Length = 2 1e-20
1wbl_A241 Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga 1e-20
2e7q_A237 Crystal Structure Of Basic Winged Bean Lectin In Co 1e-20
1gz9_A239 High-Resolution Crystal Structure Of Erythrina Cris 6e-20
1fyu_A255 Crystal Structure Of Erythrina Corallodendron Lecti 8e-20
1ax0_A239 Erythrina Corallodendron Lectin In Complex With N-A 8e-20
3n35_A242 Erythrina Corallodendron Lectin Mutant (Y106g) With 1e-19
1sfy_A239 Crystal Structure Of Recombinant Erythrina Corallod 1e-19
1uzy_A242 Erythrina Crystagalli Lectin Length = 242 1e-19
1loa_A181 Three-Dimensional Structures Of Complexes Of Lathyr 1e-19
1lof_C181 X-Ray Structure Of A Biantennary Octasaccharide-Lec 1e-19
1lul_A253 Db58, A Legume Lectin From Dolichos Biflorus Length 2e-19
1lte_A239 Structure Of A Legume Lectin With An Ordered N-Link 2e-19
1fay_A238 Winged Bean Acidic Lectin Complexed With Methyl-Alp 2e-19
2ltn_A181 Design, Expression, And Crystallization Of Recombin 2e-19
1ofs_A187 Pea Lectin-sucrose Complex Length = 187 2e-19
1rin_A180 X-Ray Crystal Structure Of A Pea Lectin-Trimannosid 2e-19
1lgb_A181 Interaction Of A Legume Lectin With The N2 Fragment 4e-19
1lgc_A181 Interaction Of A Legume Lectin With The N2 Fragment 4e-19
2b7y_A182 Fava Bean Lectin-Glucose Complex Length = 182 1e-18
1n47_A233 Isolectin B4 From Vicia Villosa In Complex With The 2e-18
1qmo_E133 Structure Of Fril, A Legume Lectin That Delays Hema 5e-17
1dhk_B223 Structure Of Porcine Pancreatic Alpha-Amylase Lengt 1e-15
1viw_B205 Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le 2e-15
3u4x_A236 Crystal Structure Of A Lectin From Camptosema Pedic 1e-14
2d3p_A236 Cratylia Floribunda Seed Lectin Crystallized At Bas 1e-14
1mvq_A236 Cratylia Mollis Lectin (Isoform 1) In Complex With 2e-14
2jdz_A239 Crystal Structure Of Recombinant Dioclea Guianensis 2e-14
2je7_A239 Crystal Structure Of Recombinant Dioclea Guianensis 3e-14
1cn1_A237 Crystal Structure Of Demetallized Concanavalin A. T 3e-14
2cna_A237 The Covalent And Three-Dimensional Structure Of Con 3e-14
1avb_A226 Arcelin-1 From Phaseolus Vulgaris L Length = 226 3e-14
3a0k_A237 Crystal Structure Of An Antiflamatory Legume Lectin 5e-14
1h9w_A237 Native Dioclea Guianensis Seed Lectin Length = 237 7e-14
1h9p_A237 Crystal Structure Of Dioclea Guianensis Seed Lectin 7e-14
2zbj_A237 Crystal Structure Of Dioclea Rostrata Lectin Length 7e-14
2jec_A239 Crystal Structure Of Recombinant Dioclea Grandiflor 7e-14
2je9_A239 Crystal Structure Of Recombinant Dioclea Grandiflor 7e-14
3sh3_A237 Crystal Structure Of A Pro-Inflammatory Lectin From 9e-14
2gdf_A237 Crystal Structure Of Dioclea Violacea Seed Lectin L 9e-14
3rrd_A237 Native Structure Of Dioclea Virgata Lectin Length = 1e-13
1dgl_A237 Lectin From Dioclea Grandiflora Complexed To Triman 3e-13
2yz4_A237 The Neutron Structure Of Concanavalin A At 2.2 Angs 4e-13
2ctv_A237 High Resolution Crystallographic Studies Of Native 5e-13
1azd_A237 Concanavalin From Canavalia Brasiliensis Length = 2 7e-13
2cwm_A237 Native Crystal Structure Of No Releasing Inductive 8e-13
2ow4_A237 Crystal Structure Of A Lectin From Canavalia Mariti 8e-13
1wuv_A237 Crystal Structure Of Native Canavalia Gladiata Lect 2e-12
2ovu_A237 Crystal Strucure Of A Lectin From Canavalia Gladiat 2e-12
1ioa_A240 Arcelin-5, A Lectin-Like Defense Protein From Phase 3e-10
1qmo_A113 Structure Of Fril, A Legume Lectin That Delays Hema 3e-07
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242 Back     alignment and structure 
Iteration: 1

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 131/248 (52%), Gaps = 20/248 (8%)
Query: 17  ANSVSFRMSSFDPNGKDIIYQGDA-VPSVGVIELINRYQ-YVCRVGWATYADRVPLWDSD 74
           ++ +SF    F PN K+II+QGDA V + GV+++    +     +G A YA  + +WDS 
Sbjct: 3   SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 62
Query: 75  TGELTDFSTKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAXXXXXXXXXXXXXXXXX 134
           TG++  F+T FSF +          GL FFLAPA  QIP  S+                 
Sbjct: 63  TGKVASFATSFSFVVKADKSDGV-DGLAFFLAPANSQIPSGSS-AGMFGLFSSSDSKSSN 120
Query: 135 HIVHVEFDTYFNRE---WDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNS 191
            I+ VEFDTYF +    WDP     H+GI+ NSI S    +W+  + + + ADV I Y +
Sbjct: 121 QIIAVEFDTYFGKAYNPWDPD--FKHIGIDVNSIKSIKTVKWD--WRNGEVADVVITYRA 176
Query: 192 TTKNLSVSWTYRQTSDPRENTS--LFYIIDLTKVLPQWVTIGFSAATSQFG--ERHILES 247
            TK+L+V  +Y     P + TS  +   +DL  +LP+WV++GFS         E H + S
Sbjct: 177 PTKSLTVCLSY-----PSDGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLS 231
Query: 248 WEFSSSLD 255
           W F+S+L+
Sbjct: 232 WYFTSNLE 239
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234 Back     alignment and structure
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237 Back     alignment and structure
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232 Back     alignment and structure
>pdb|2PEL|A Chain A, Peanut Lectin Length = 236 Back     alignment and structure
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281 Back     alignment and structure
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251 Back     alignment and structure
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256 Back     alignment and structure
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242 Back     alignment and structure
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261 Back     alignment and structure
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239 Back     alignment and structure
>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252 Back     alignment and structure
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234 Back     alignment and structure
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239 Back     alignment and structure
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233 Back     alignment and structure
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242 Back     alignment and structure
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253 Back     alignment and structure
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240 Back     alignment and structure
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252 Back     alignment and structure
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252 Back     alignment and structure
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243 Back     alignment and structure
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257 Back     alignment and structure
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181 Back     alignment and structure
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257 Back     alignment and structure
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253 Back     alignment and structure
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242 Back     alignment and structure
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241 Back     alignment and structure
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237 Back     alignment and structure
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239 Back     alignment and structure
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255 Back     alignment and structure
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239 Back     alignment and structure
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242 Back     alignment and structure
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239 Back     alignment and structure
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242 Back     alignment and structure
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181 Back     alignment and structure
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181 Back     alignment and structure
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253 Back     alignment and structure
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239 Back     alignment and structure
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238 Back     alignment and structure
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181 Back     alignment and structure
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187 Back     alignment and structure
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180 Back     alignment and structure
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181 Back     alignment and structure
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182 Back     alignment and structure
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233 Back     alignment and structure
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133 Back     alignment and structure
>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223 Back     alignment and structure
>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205 Back     alignment and structure
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum Seeds In Complex With 5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose Length = 236 Back     alignment and structure
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph Length = 236 Back     alignment and structure
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With Methyl-Alpha-D- Mannose Length = 236 Back     alignment and structure
>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin S131h Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The Metal- Binding Region Length = 237 Back     alignment and structure
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of Concanavalin A, Iv.Atomic Coordinates,Hydrogen Bonding,And Quaternary Structure Length = 237 Back     alignment and structure
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226 Back     alignment and structure
>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From Cymbosema Roseum Seeds Length = 237 Back     alignment and structure
>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin Length = 237 Back     alignment and structure
>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin Length = 237 Back     alignment and structure
>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin Length = 237 Back     alignment and structure
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Mutant E123a-H131n-K132q Complexed With 5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239 Back     alignment and structure
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The Seeds Of Dioclea Wilsonii Standl Length = 237 Back     alignment and structure
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin Length = 237 Back     alignment and structure
>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin Length = 237 Back     alignment and structure
>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside Length = 237 Back     alignment and structure
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms Length = 237 Back     alignment and structure
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native Concanavalin A Using Rapid Laue Data Collection Methods And The Introduction Of A Monochromatic Large-Angle Oscillation Technique (Lot) Length = 237 Back     alignment and structure
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis Length = 237 Back     alignment and structure
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin From Seeds Of The Canavalia Maritima (Conm) Length = 237 Back     alignment and structure
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima Seeds (Conm) In Complex With Man1-2man-Ome Length = 237 Back     alignment and structure
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin (Cgl): A Tetrameric Cona-Like Lectin Length = 237 Back     alignment and structure
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl) In Complex With Man1-2man-Ome Length = 237 Back     alignment and structure
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240 Back     alignment and structure
>pdb|1QMO|A Chain A, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 113 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 4e-57
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 7e-56
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 9e-56
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 1e-55
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 3e-55
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 7e-53
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 8e-53
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 1e-52
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 3e-52
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 4e-52
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 4e-52
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 8e-52
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 1e-51
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 2e-51
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 3e-51
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 1e-49
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 5e-48
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 5e-48
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 4e-47
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 4e-47
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 3e-46
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 4e-45
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 6e-40
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 6e-31
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 6e-27
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 3e-26
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 2e-16
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 1e-18
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 3e-14
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 6e-14
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242 Back     alignment and structure
 Score =  182 bits (464), Expect = 4e-57
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 15/250 (6%)

Query: 17  ANSVSFRMSSFDPNGKDIIYQGDA-VPSVGVIEL--INRYQYVCRVGWATYADRVPLWDS 73
           ++ +SF+  +F  NGKD+ +QG+A V   GV++L  +         G A Y   + +W+ 
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60

Query: 74  DTGELTDFSTKFSFQIDTQSRPT-YGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSS 132
           +TGEL  F T FSF ++T + P     GL FFLAP     P   AGG+ GLFN T    S
Sbjct: 61  NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDS--PLRRAGGYFGLFNDTKC-DS 117

Query: 133 SNHIVHVEFDTYFN--REWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYN 190
           S   V VEFDT  +    WDP     H+GI+ N + S    RWN  +   + A+V I Y 
Sbjct: 118 SYQTVAVEFDTIGSPVNFWDPGF--PHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYE 175

Query: 191 STTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQ-FGERHILESWE 249
           +++K L+ S TY      + + S+  I+DL ++LP+WV++GFS +T       H + +W 
Sbjct: 176 ASSKTLTASLTY---PSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWY 232

Query: 250 FSSSLDIKST 259
           F+S+    ++
Sbjct: 233 FTSTFINTNS 242
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234 Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261 Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239 Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232 Back     alignment and structure
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240 Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234 Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253 Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253 Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237 Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242 Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243 Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257 Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252 Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239 Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233 Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226 Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238 Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242 Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223 Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133 Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237 Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260 Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253 Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
3ujo_A281 Legume lectin; carbohydrate-binding, galactose, ad 100.0
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 100.0
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 100.0
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 100.0
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 100.0
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 100.0
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 100.0
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 100.0
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 100.0
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 100.0
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 100.0
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 100.0
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 100.0
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 100.0
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 100.0
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 100.0
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 100.0
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 100.0
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 100.0
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 100.0
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 100.0
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 100.0
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 100.0
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 100.0
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 100.0
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 100.0
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 100.0
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 100.0
2a6y_A256 EMP47P (FORM1); beta sandwich, carbohydrate bindin 99.97
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 99.96
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.92
2a6z_A222 EMP47P (FORM2); beta sandwich, carbohydrate bindin 99.91
2a6v_A226 EMP46P; beta sandwich, carbohydrate binding protei 99.78
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 99.56
2ks1_B44 Epidermal growth factor receptor; ERBB1, ERBB2, tr 93.27
2l2t_A44 Receptor tyrosine-protein kinase ERBB-4; transmemb 93.08
2jwa_A44 Receptor tyrosine-protein kinase ERBB-2; transmemb 89.52
2k1k_A38 Ephrin type-A receptor 1; EPHA1, receptor tyrosine 83.24
>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A* Back     alignment and structure
Probab=100.00  E-value=2.2e-66  Score=475.56  Aligned_cols=238  Identities=38%  Similarity=0.703  Sum_probs=207.4

Q ss_pred             HHHHHhc--CCCceeeEEeCCCCCCCCCeEEecceeeecCeEEeccCCC----ccceEEEEEeCCCeeccCCCCCCceee
Q 045189            8 IFIVVLV--PSANSVSFRMSSFDPNGKDIIYQGDAVPSVGVIELINRYQ----YVCRVGWATYADRVPLWDSDTGELTDF   81 (299)
Q Consensus         8 ~~~~~~~--~~~~~~sF~f~~F~~~~~~l~l~G~A~~~~g~i~LT~~~~----~~~~~Gra~y~~Pi~l~d~~t~~~asF   81 (299)
                      +||+++.  .++..++|+|++|.  ..+|+|+|+|.+.+|.||||++..    ..++.|||+|++||+|||+.+|+++||
T Consensus        13 ~fl~l~~~~~sa~~~sF~f~~F~--~~nL~l~GdA~i~~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSF   90 (281)
T 3ujo_A           13 LFLILLTKAASANLISFTFKKFN--ETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASW   90 (281)
T ss_dssp             -----------CEEEEEEESSCC--STTEEECSSCCCBTTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEE
T ss_pred             HHHHHHcccCcCCcceEEcCCCC--ccCEEEecceEEeCCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeE
Confidence            3444443  45788999999997  578999999999999999999721    124899999999999999999999999


Q ss_pred             EEEEEEEEecCCCCCCCcceEEEEccCCCCCCCCCCCCccccccCCCCCCCCCcEEEEEEeCccCCCCCCCCCCCcEEEE
Q 045189           82 STKFSFQIDTQSRPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSSSNHIVHVEFDTYFNREWDPSGVQDHVGIN  161 (299)
Q Consensus        82 st~F~F~I~~~~~~~~gdGlAF~l~p~~~~~~~~~~G~~LGl~n~~~~~~~~~~~vAVEFDT~~n~~~Dp~~~~nHVgI~  161 (299)
                      +|+|+|.|.+++...+||||||+|+|.+.. | +..||||||+|.+++ +..++.|||||||++|.+|||++  ||||||
T Consensus        91 sTsFsF~I~~~~~~~~gdGlAF~laP~~~~-p-~~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N~e~Dp~~--nHVGID  165 (281)
T 3ujo_A           91 ATSFTFNLQAPNAASPADGLAFALVPVGSQ-P-KDKGGFLGLFDSKNY-ASSNQTVAVEFDTFYNGGWDPTE--RHIGID  165 (281)
T ss_dssp             EEEEEEECCCSSTTSCCEEEEEEEEETTCC-C-CCCGGGTTTCSCSSC-CTTSCCEEEEECCSCCCSSCCSS--SEEEEE
T ss_pred             EEEEEEEEecCCCCCCCCceEEEEecCCCC-C-CCCcceeeeccccCC-CccCcEEEEEEeccccccCCCCC--CeEEEE
Confidence            999999999877778999999999998743 4 478999999988765 67899999999999997799999  999999


Q ss_pred             cCCCcceeeeecccccCCCCeeEEEEEEeCCCCeEEEEEeecCCCCCCCceeEEEEeccCcccCceeEEEEEeecCC---
Q 045189          162 NNSIASAVHTRWNASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQ---  238 (299)
Q Consensus       162 ins~~S~~~~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~~p~~~~ls~~vdL~~~l~~~vyvGFSAsTG~---  238 (299)
                      +|++.|.++.+|+  +.+|+.++|||+||+.+++|+|+|.+.+   .|+.|++++.+||+++|||+|||||||+||.   
T Consensus       166 vNSi~S~~t~~~~--l~~G~~~~vwI~Yd~~tk~L~V~l~~~~---~~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~~~~  240 (281)
T 3ujo_A          166 VNSIKSIKTTSWD--FANGENAEVLITYDSSTNLLVASLVHPS---QKTSFIVSERVDLTSVLPEWVSVGFSATTGLSKG  240 (281)
T ss_dssp             ESSSCCSCEEECC--CCSSCCEEEEEEECTTTCEEEEEEECTT---TCCCEEEEEECCSTTTSCSEEEEEEEEEECSSTT
T ss_pred             cCCCCcccccccc--ccCCCEEEEEEEEeCCCCEEEEEEecCC---CCCCceEEEEechHHhccCcEEEEEEeecCCCCc
Confidence            9999999999886  6799999999999999999999999865   3558899999999999999999999999996   


Q ss_pred             cccceEEEEEEEEecccCC
Q 045189          239 FGERHILESWEFSSSLDIK  257 (299)
Q Consensus       239 ~~~~h~IlsWsF~s~~~~~  257 (299)
                      ..|.|+|++|+|+++++..
T Consensus       241 ~~e~H~IlsWSFss~l~~~  259 (281)
T 3ujo_A          241 YVETNEVLSWSFASKLSIN  259 (281)
T ss_dssp             SCCCCEEEEEEEEEEECSS
T ss_pred             ccceeEEEEEEEEEEcCCC
Confidence            5899999999999998764
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Back     alignment and structure
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Back     alignment and structure
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Back     alignment and structure
>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Back     alignment and structure
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} Back     alignment and structure
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} Back     alignment and structure
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A Back     alignment and structure
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 299
d1fx5a_240 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 2e-57
d1qnwa_237 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 1e-56
g2ltn.1229 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum 2e-55
d1dbna_239 b.29.1.1 (A:) Legume lectin {Maackia amurensis, le 4e-55
d1hqla_236 b.29.1.1 (A:) Legume lectin {Griffonia simplicifol 4e-55
d1ukga_241 b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero 2e-54
d1g8wa_233 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 3e-54
d1g7ya_253 b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos 2e-53
d1leda_243 b.29.1.1 (A:) Legume lectin {West-central african 2e-53
d1fnya_237 b.29.1.1 (A:) Legume lectin {Black locust (Robinia 3e-53
d1v6ia_232 b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog 5e-53
g1qmo.1230 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich 1e-52
d1gzca_239 b.29.1.1 (A:) Legume lectin {Cockspur coral tree ( 2e-52
d1avba_226 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 2e-51
d1g9fa_251 b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) 4e-51
d2d3sa1237 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso 2e-50
d1f9ka_234 b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca 1e-49
d1n47a_233 b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi 4e-49
d1ioaa_228 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 5e-46
d1dhkb_204 b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar 1e-36
d1nlsa_237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 3e-32
d1nlsa_237 b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia 8e-25
d1gv9a_228 b.29.1.13 (A:) Carbohydrate-recognition domain of 1e-25
d2a6za1221 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake 2e-08
d2a6va1218 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake 3e-07
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score =  182 bits (464), Expect = 2e-57
 Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 11/243 (4%)

Query: 17  ANSVSFRMSSFDPNGKDIIYQGDA-VPSVGVIELINRYQYV--CRVGWATYADRVPLWDS 73
           ++ +SF+  +F  NGKD+ +QG+A V   GV++L      +     G A Y   + +W+ 
Sbjct: 1   SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60

Query: 74  DTGELTDFSTKFSFQIDTQSRPT-YGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTSFSS 132
           +TGEL  F T FSF ++T + P     GL FFLAP     P   AGG+ GLFN T    S
Sbjct: 61  NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDS--PLRRAGGYFGLFNDTKC-DS 117

Query: 133 SNHIVHVEFDTYFNREWDPSGVQDHVGINNNSIASAVHTRWNASFHSEDTADVRIAYNST 192
           S   V VEFDT  +          H+GI+ N + S    RWN  +   + A+V I Y ++
Sbjct: 118 SYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEAS 177

Query: 193 TKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQ-FGERHILESWEFS 251
           +K L+ S TY      + + S+  I+DL ++LP+WV++GFS +T       H + +W F+
Sbjct: 178 SKTLTASLTY---PSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFT 234

Query: 252 SSL 254
           S+ 
Sbjct: 235 STF 237
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237 Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239 Back     information, alignment and structure
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236 Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241 Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233 Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253 Back     information, alignment and structure
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243 Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237 Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232 Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239 Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226 Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251 Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237 Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234 Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233 Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228 Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237 Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
d1hqla_236 Legume lectin {Griffonia simplicifolia, lectin I-b 100.0
d1leda_243 Legume lectin {West-central african legume (Griffo 100.0
d1fx5a_240 Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI 100.0
d1qnwa_237 Legume lectin {Furze (Ulex europaeus), UEA-II [Tax 100.0
d2d3sa1237 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1gzca_239 Legume lectin {Cockspur coral tree (Erythrina cris 100.0
d1g9fa_251 Legume lectin {Soybean (Glycine max) [TaxId: 3847] 100.0
d1dbna_239 Legume lectin {Maackia amurensis, leukoagglutinin 100.0
d1g7ya_253 Legume lectin {Horse gram (Dolichos biflorus), dif 100.0
d1f9ka_234 Legume lectin {Winged bean (Psophocarpus tetragono 100.0
d1g8wa_233 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1v6ia_232 Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3 100.0
g1qmo.1230 Legume lectin {Field bean (Dolichos lablab), Fril 100.0
d1fnya_237 Legume lectin {Black locust (Robinia pseudoacacia) 100.0
d1n47a_233 Legume lectin {Hairy vetch (Vicia villosa), isolec 100.0
g2ltn.1229 Legume lectin {Garden pea (Pisum sativum) [TaxId: 100.0
d1ukga_241 Legume lectin {Bloodwood tree (Pterocarpus angolen 100.0
d1avba_226 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1ioaa_228 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1dhkb_204 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 100.0
d1gv9a_228 Carbohydrate-recognition domain of P58/ERGIC-53 {R 100.0
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 100.0
d2a6za1221 Emp47p N-terminal domain {Baker's yeast (Saccharom 99.94
d2a6va1218 Emp46p N-terminal domain {Baker's yeast (Saccharom 99.94
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.93
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=3.8e-60  Score=424.79  Aligned_cols=227  Identities=37%  Similarity=0.594  Sum_probs=200.9

Q ss_pred             eeeEEeCCCCCC-CCCeEEecceeeecCeEEeccCC----CccceEEEEEeCCCeeccCCCCCCceeeEEEEEEEEecCC
Q 045189           19 SVSFRMSSFDPN-GKDIIYQGDAVPSVGVIELINRY----QYVCRVGWATYADRVPLWDSDTGELTDFSTKFSFQIDTQS   93 (299)
Q Consensus        19 ~~sF~f~~F~~~-~~~l~l~G~A~~~~g~i~LT~~~----~~~~~~Gra~y~~Pi~l~d~~t~~~asFst~F~F~I~~~~   93 (299)
                      +++|+|++|+.+ ..+|+|+|+|.+.++.|+||++.    +..+++|||+|++||+||+..+++++||+|+|+|+|... 
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~-   79 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT-   79 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC-
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEecCCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCC-
Confidence            479999999864 46799999999999999999852    235689999999999999999999999999999999874 


Q ss_pred             CCCCCcceEEEEccCCCCCCCCCCCCccccccCCCC-CCCCCcEEEEEEeCccCCC-CCCCCCCCcEEEEcCCCcceeee
Q 045189           94 RPTYGHGLVFFLAPAGFQIPPNSAGGFLGLFNTTTS-FSSSNHIVHVEFDTYFNRE-WDPSGVQDHVGINNNSIASAVHT  171 (299)
Q Consensus        94 ~~~~gdGlAF~l~p~~~~~~~~~~G~~LGl~n~~~~-~~~~~~~vAVEFDT~~n~~-~Dp~~~~nHVgI~ins~~S~~~~  171 (299)
                      ...+||||||+|+|...  +.+..|++||+++..++ +...++.|||||||++|.+ +||++  +|||||+|++.|..+.
T Consensus        80 ~~~~gDGlAFvl~p~~~--~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~--nHIgIdvns~~s~~~~  155 (236)
T d1hqla_          80 GNGPADGLAFFLAPPDS--DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSY--RHIGINVNSIVSVATK  155 (236)
T ss_dssp             SSCCCCEEEEEEECTTC--CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSS--CEEEEEESSSSCSEEE
T ss_pred             CCCCCceEEEEEeCCCC--CCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCC--CEEEEEcCCccccccc
Confidence            55689999999999753  44678999999987554 3457899999999999988 89999  9999999999998888


Q ss_pred             ecc-cccCCCCeeEEEEEEeCCCCeEEEEEeecCCCCCCCceeEEEEeccCcccCceeEEEEEeecCCc-ccceEEEEEE
Q 045189          172 RWN-ASFHSEDTADVRIAYNSTTKNLSVSWTYRQTSDPRENTSLFYIIDLTKVLPQWVTIGFSAATSQF-GERHILESWE  249 (299)
Q Consensus       172 ~~~-~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~~~~p~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~-~~~h~IlsWs  249 (299)
                      ++. .++.+|+.++|||+||+.+++|+|+|++.    +|..|++++.+||+++|+++||||||||||.. .+.|+|++|+
T Consensus       156 ~~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~----~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~I~sWs  231 (236)
T d1hqla_         156 RWEDSDIFSGKIATARISYDGSAEILTVVLSYP----DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWR  231 (236)
T ss_dssp             ECCHHHHTSCSCEEEEEEEETTTTEEEEEEEET----TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEE
T ss_pred             ccccccccCCCEEEEEEEEeCCCcEEEEEEecC----CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEEEEEeE
Confidence            775 46899999999999999999999999874    56789999999999999999999999999975 6789999999


Q ss_pred             EEecc
Q 045189          250 FSSSL  254 (299)
Q Consensus       250 F~s~~  254 (299)
                      |++++
T Consensus       232 F~s~l  236 (236)
T d1hqla_         232 FSSNL  236 (236)
T ss_dssp             EEEEC
T ss_pred             eEecC
Confidence            99874
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure