Citrus Sinensis ID: 045213

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
VTIAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVVRFENSRSDT
ccccccccccccccccccEEEccccccEEEEEEcEEccccccccEEEEEEcccccccccEEEEEcccccHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEccEEEEEEccccEEEEEEccEEEccccccccccHHHHHHHHHcccEEEEcccccccccHHHHHHcccccccccccccccEEEEEEccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEcccccccc
cccccccccccccccccccccccccccEEEEEEccccccccHcccEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEccccEEccEEHHHHHHccHHHcccccccccEEEEEcccccEEEEEcccHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEEEEEEEccccccc
vtiaaqdpdilfsgggksfltgsrtakfsygyssfngknssmEEFCEATLSAVDRQKVAFFgvydghggsrtsEYLRNHLFknlsshpdfieDTKTAIVEVFTNtdenylseekgqqgdtgstaSTAVLLGDRLVVANVGDSRVVAsragsaiplsvdhkpdpaderQRIEDAGGFviwagtwrvggvlpvsrafgdKLLKQYVvaepeiqeeeidgiDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAyargssdniTCVVVRFENSRSDT
vtiaaqdpdilfsgggksfltgsRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLseekgqqgdtgsTASTAVLLGDRLVVANVGDSRVVasragsaiplsvdhkpdpaDERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEpeiqeeeidgiDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDayargssdnitcVVVRFENSRSDT
VTIAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVVRFENSRSDT
**********LF****KSFLTGSRTAKFSYGYSSFN******EEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTD*******************TAVLLGDRLVVANVGDSRVVA*************************DAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVVRF*******
**************************KFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKG*QGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVV**EN*****
VTIAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLS***********TASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVVRFENSRSDT
*************************AKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVVRFEN*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VTIAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNITCVVVRFENSRSDT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query281 2.2.26 [Sep-21-2011]
Q8VZN9371 Probable protein phosphat yes no 0.985 0.746 0.703 1e-114
Q4PSE8 447 Probable protein phosphat no no 0.914 0.574 0.623 2e-93
Q8RXV3311 Probable protein phosphat no no 0.914 0.826 0.619 6e-93
Q8LAY8354 Probable protein phosphat no no 0.914 0.725 0.623 1e-92
Q67UX7348 Probable protein phosphat yes no 0.914 0.738 0.615 6e-91
Q5Z6F5327 Probable protein phosphat no no 0.882 0.758 0.634 1e-90
Q7XR06282 Probable protein phosphat no no 0.911 0.907 0.615 2e-88
Q6L5C4491 Probable protein phosphat no no 0.900 0.515 0.586 3e-86
Q94AT1420 Probable protein phosphat no no 0.946 0.633 0.546 8e-83
Q6EN45363 Probable protein phosphat no no 0.903 0.699 0.564 8e-82
>sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1 Back     alignment and function desciption
 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/277 (70%), Positives = 234/277 (84%)

Query: 1   VTIAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAF 60
           + I+++DP+ LFSGGG SFL G RT KFSYGYSS  GK ++ME++ E  +S V+ Q VAF
Sbjct: 95  LMISSRDPNALFSGGGISFLAGVRTVKFSYGYSSLKGKRATMEDYFETRISDVNGQMVAF 154

Query: 61  FGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDT 120
           FGV+DGHGG+RT+EYL+N+LFKNL SH DFI DTK AIVEVF  TDE YL EE GQ  + 
Sbjct: 155 FGVFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNA 214

Query: 121 GSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWA 180
           GSTA+TA L+GD+L+VANVGDSRVVASR GSA+PLS DHKPD +DERQRIEDAGGF+IWA
Sbjct: 215 GSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWA 274

Query: 181 GTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAM 240
           GTWRVGG+L VSRAFGDK LK YV+AEPEIQEE+I  ++FI+VASDGLWNV+SN++AVA+
Sbjct: 275 GTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDISTLEFIVVASDGLWNVLSNKDAVAI 334

Query: 241 VEHITDAEAASRKLITDAYARGSSDNITCVVVRFENS 277
           V  I+DAE A+RKL+ + YARGS DNITC+VVRFE S
Sbjct: 335 VRDISDAETAARKLVQEGYARGSCDNITCIVVRFEVS 371

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q4PSE8|P2C71_ARATH Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1 Back     alignment and function description
>sp|Q8LAY8|P2C69_ARATH Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1 Back     alignment and function description
>sp|Q67UX7|P2C10_ORYSJ Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z6F5|P2C59_ORYSJ Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1 Back     alignment and function description
>sp|Q7XR06|P2C45_ORYSJ Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2 Back     alignment and function description
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description
>sp|Q94AT1|P2C76_ARATH Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1 Back     alignment and function description
>sp|Q6EN45|P2C13_ORYSJ Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query281
255558462 571 protein phosphatase 2c, putative [Ricinu 0.985 0.485 0.815 1e-130
225457845276 PREDICTED: probable protein phosphatase 0.978 0.996 0.792 1e-124
118488591303 unknown [Populus trichocarpa] 0.978 0.907 0.785 1e-123
224085051276 predicted protein [Populus trichocarpa] 0.978 0.996 0.781 1e-123
356536508320 PREDICTED: probable protein phosphatase 0.985 0.865 0.765 1e-122
388516279317 unknown [Lotus japonicus] 0.985 0.873 0.765 1e-121
449453017275 PREDICTED: probable protein phosphatase 0.967 0.989 0.746 1e-120
356574987288 PREDICTED: LOW QUALITY PROTEIN: probable 0.964 0.940 0.763 1e-117
297852168376 predicted protein [Arabidopsis lyrata su 0.978 0.731 0.705 1e-112
30693757371 putative protein phosphatase 2C 11 [Arab 0.985 0.746 0.703 1e-112
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis] gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/277 (81%), Positives = 252/277 (90%)

Query: 1   VTIAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAF 60
           + IA +DPD LFSGGG SFL+GSRTAKFSYGYSSF GK SSME+F E  +S VD Q VAF
Sbjct: 295 IMIANRDPDALFSGGGISFLSGSRTAKFSYGYSSFKGKRSSMEDFYETRISEVDGQMVAF 354

Query: 61  FGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDT 120
           FGV+DGHGG+RT+EYL+N+LF+NLSSHPDFI+DTKTAIVEVF  TD +YL+EEKG Q D 
Sbjct: 355 FGVFDGHGGARTAEYLKNNLFRNLSSHPDFIKDTKTAIVEVFRQTDADYLNEEKGHQKDA 414

Query: 121 GSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWA 180
           GSTASTAVLLGDRL+VANVGDSRVVASRAGSAIPLS+DHKPD +DERQRIE+AGGF+IWA
Sbjct: 415 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFIIWA 474

Query: 181 GTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAM 240
           GTWRVGGVL VSRAFGDKLLK YVVAEPEIQEEEIDG+DFIIVASDGLWNV+SN++AVA+
Sbjct: 475 GTWRVGGVLAVSRAFGDKLLKPYVVAEPEIQEEEIDGVDFIIVASDGLWNVLSNQDAVAL 534

Query: 241 VEHITDAEAASRKLITDAYARGSSDNITCVVVRFENS 277
           V  I DAEAASRKLI +AYARGSSDNITCVVVRF+NS
Sbjct: 535 VRDIADAEAASRKLIQEAYARGSSDNITCVVVRFDNS 571

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225457845|ref|XP_002267913.1| PREDICTED: probable protein phosphatase 2C 11 [Vitis vinifera] gi|302142730|emb|CBI19933.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118488591|gb|ABK96108.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224085051|ref|XP_002307471.1| predicted protein [Populus trichocarpa] gi|222856920|gb|EEE94467.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356536508|ref|XP_003536779.1| PREDICTED: probable protein phosphatase 2C 11-like [Glycine max] Back     alignment and taxonomy information
>gi|388516279|gb|AFK46201.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|449453017|ref|XP_004144255.1| PREDICTED: probable protein phosphatase 2C 11-like [Cucumis sativus] gi|449492785|ref|XP_004159100.1| PREDICTED: probable protein phosphatase 2C 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356574987|ref|XP_003555624.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 11-like [Glycine max] Back     alignment and taxonomy information
>gi|297852168|ref|XP_002893965.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339807|gb|EFH70224.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30693757|ref|NP_175057.2| putative protein phosphatase 2C 11 [Arabidopsis thaliana] gi|75304482|sp|Q8VZN9.1|P2C11_ARATH RecName: Full=Probable protein phosphatase 2C 11; Short=AtPP2C11 gi|17381034|gb|AAL36329.1| putative protein phosphatase type 2C [Arabidopsis thaliana] gi|21436259|gb|AAM51268.1| putative protein phosphatase type 2C [Arabidopsis thaliana] gi|332193885|gb|AEE32006.1| putative protein phosphatase 2C 11 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query281
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.978 0.741 0.709 4.1e-104
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.932 0.586 0.619 1.3e-86
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.932 0.740 0.615 1.1e-85
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.914 0.826 0.619 1.4e-85
TAIR|locus:2163781420 AT5G53140 [Arabidopsis thalian 0.946 0.633 0.546 7.1e-77
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.871 0.865 0.432 2e-49
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.946 0.943 0.4 8.8e-47
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.914 0.908 0.419 2.3e-46
TAIR|locus:2046046290 PIA1 "PP2C induced by AVRRPM1" 0.864 0.837 0.430 3e-46
TAIR|locus:2087095289 AT3G15260 [Arabidopsis thalian 0.911 0.885 0.429 4.8e-46
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
 Identities = 195/275 (70%), Positives = 233/275 (84%)

Query:     3 IAAQDPDILFSGGGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFG 62
             I+++DP+ LFSGGG SFL G RT KFSYGYSS  GK ++ME++ E  +S V+ Q VAFFG
Sbjct:    97 ISSRDPNALFSGGGISFLAGVRTVKFSYGYSSLKGKRATMEDYFETRISDVNGQMVAFFG 156

Query:    63 VYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGS 122
             V+DGHGG+RT+EYL+N+LFKNL SH DFI DTK AIVEVF  TDE YL EE GQ  + GS
Sbjct:   157 VFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGS 216

Query:   123 TASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGT 182
             TA+TA L+GD+L+VANVGDSRVVASR GSA+PLS DHKPD +DERQRIEDAGGF+IWAGT
Sbjct:   217 TAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGT 276

Query:   183 WRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVE 242
             WRVGG+L VSRAFGDK LK YV+AEPEIQEE+I  ++FI+VASDGLWNV+SN++AVA+V 
Sbjct:   277 WRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDISTLEFIVVASDGLWNVLSNKDAVAIVR 336

Query:   243 HITDAEAASRKLITDAYARGSSDNITCVVVRFENS 277
              I+DAE A+RKL+ + YARGS DNITC+VVRFE S
Sbjct:   337 DISDAETAARKLVQEGYARGSCDNITCIVVRFEVS 371
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163781 AT5G53140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZN9P2C11_ARATH3, ., 1, ., 3, ., 1, 60.70390.98570.7466yesno
Q67UX7P2C10_ORYSJ3, ., 1, ., 3, ., 1, 60.61590.91450.7385yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014338001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (276 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query281
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 5e-84
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 5e-83
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-64
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 9e-48
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-45
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 8e-35
pfam13672211 pfam13672, PP2C_2, Protein phosphatase 2C 0.001
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  251 bits (644), Expect = 5e-84
 Identities = 104/258 (40%), Positives = 145/258 (56%), Gaps = 15/258 (5%)

Query: 28  FSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSH 87
           FS G S   G   + E+      + ++ +    FGV+DGHGG    E+    L + L   
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPN-LNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEE 59

Query: 88  PDFI-----EDTKTAIVEVFTNTDENYLSE--EKGQQGDTGSTASTAVLLGDRLVVANVG 140
            +       ED + A+ + F   DE  L E  ++     +G+TA  A++ G++L VANVG
Sbjct: 60  LEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVG 119

Query: 141 DSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLL 200
           DSR V  R G A+ L+ DHKP   +ER+RIE AGG V      RV GVL V+RA GD  L
Sbjct: 120 DSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN---GRVPGVLAVTRALGDFDL 176

Query: 201 KQYVVAEPEIQEEEIDGID-FIIVASDGLWNVISNEEAVAMVEH---ITDAEAASRKLIT 256
           K  V AEP++   ++   D F+I+ASDGLW+V+SN+EAV +V       D + A+++L+ 
Sbjct: 177 KPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVD 236

Query: 257 DAYARGSSDNITCVVVRF 274
            A  RGS DNIT VVVR 
Sbjct: 237 LALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|222308 pfam13672, PP2C_2, Protein phosphatase 2C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 281
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.96
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.9
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.89
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.84
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.76
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.67
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.75
PRK10693303 response regulator of RpoS; Provisional 85.36
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.3e-50  Score=352.88  Aligned_cols=251  Identities=34%  Similarity=0.546  Sum_probs=213.7

Q ss_pred             CceEEEEeecccCCCCCCcceEEeeccC--------CCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHH
Q 045213           26 AKFSYGYSSFNGKNSSMEEFCEATLSAV--------DRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTA   97 (281)
Q Consensus        26 ~~~~~~~~s~~G~r~~neD~~~~~~~~~--------~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~   97 (281)
                      +-++++.+|++|.|+.|||++++.....        ......+|+|||||||+.++++|++.+++.+.+.......+.++
T Consensus        63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~a  142 (365)
T PLN03145         63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKV  142 (365)
T ss_pred             CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHH
Confidence            4578999999999999999988643211        12345899999999999999999999999988765555567888


Q ss_pred             HHHHHHHHHHHHHhhhh-cCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCe
Q 045213           98 IVEVFTNTDENYLSEEK-GQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGF  176 (281)
Q Consensus        98 l~~~~~~~~~~~~~~~~-~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~  176 (281)
                      |.++|..+++.+..... .....+|||++++++.++++|++|+||||+|++|++++++||+||++.++.|++|+...||.
T Consensus       143 l~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~  222 (365)
T PLN03145        143 VSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGY  222 (365)
T ss_pred             HHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCc
Confidence            99999999999876532 23345999999999999999999999999999999999999999999999999999999998


Q ss_pred             EEeCCceeecCccccccccCCCCCcc-------ccccCCceeEEEecCCe-EEEEEcCCCccCCCHHHHHHHHH----cc
Q 045213          177 VIWAGTWRVGGVLPVSRAFGDKLLKQ-------YVVAEPEIQEEEIDGID-FIIVASDGLWNVISNEEAVAMVE----HI  244 (281)
Q Consensus       177 ~~~~~~~~~~~~~~~tr~lG~~~~~~-------~~~~~p~~~~~~l~~~d-~lil~SDGv~d~l~~~ei~~~~~----~~  244 (281)
                      +..   .+.++.+.+||+||+..+|.       .++++|++..+++.++| +||||||||||+|+++++.++++    ..
T Consensus       223 v~~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~  299 (365)
T PLN03145        223 VYD---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEH  299 (365)
T ss_pred             eec---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcC
Confidence            853   35677778999999987653       36789999999999855 56799999999999999866553    44


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCCC
Q 045213          245 TDAEAASRKLITDAYARGSSDNITCVVVRFENSRS  279 (281)
Q Consensus       245 ~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~~  279 (281)
                      .+|+++|+.|++.|+.+++.||+|||||+|+...+
T Consensus       300 ~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~  334 (365)
T PLN03145        300 NDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPP  334 (365)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCC
Confidence            68999999999999999999999999999987544

>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query281
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 5e-37
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 6e-37
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 9e-37
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-33
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-33
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-33
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-33
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-33
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-33
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-33
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 6e-30
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 1e-29
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 1e-29
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-29
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-29
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 8e-29
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 5e-14
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 5e-12
2pk0_A250 Structure Of The S. Agalactiae Serine/threonine Pho 1e-09
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 3e-08
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 7e-07
2pom_A372 Tab1 With Manganese Ion Length = 372 1e-06
2j4o_A401 Structure Of Tab1 Length = 401 1e-06
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-06
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-05
2j82_A240 Structural Analysis Of The Pp2c Family Phosphatase 1e-04
2xzv_A240 The Cyanobacterial Pp2c-Like Phosphatase Tppha Requ 2e-04
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 148/302 (49%), Gaps = 57/302 (18%)
Query: 30  YGYSSFNGKNSSMEE-------FCEATLSAV-----DRQKVA-FFGVYDGHGGSRTSEYL 76
           YG++S  G+   ME+       F +++  ++     D Q  A FFGVYDGHGGS+ + Y 
Sbjct: 11  YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 70
Query: 77  RNHLF-----------KNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTAS 125
           R  +              LS    ++E  K A+   F   D      E       GST+ 
Sbjct: 71  RERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEI---ESVAPETVGSTSV 127
Query: 126 TAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVI-WAGTWR 184
            AV+    + VAN GDSR V  R  +A+PLSVDHKPD  DE  RIE AGG VI W G  R
Sbjct: 128 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-R 186
Query: 185 VGGVLPVSRAFGDKLLKQYVVAEPEIQE-EEIDGIDFIIVASDGLWNVISNEEAVAMVE- 242
           V GVL +SR+ GD+ LK  ++ +PE+   + +   D +I+ASDG+W+V+++EEA  M   
Sbjct: 187 VFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
Query: 243 -----HITDAEAASRKLITD---------------------AYARGSSDNITCVVVRFEN 276
                H  +A A    L+ D                     A  RGS DNI+ VVV  + 
Sbjct: 247 RILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKP 306
Query: 277 SR 278
            R
Sbjct: 307 RR 308
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine Phosphatase At 2.65 Resolution Length = 250 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha From Thermosynechococcus Elongatus Length = 240 Back     alignment and structure
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires Three Metals In The Catalytic Center For Efficient Catalysis Length = 240 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query281
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-107
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-103
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-100
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-100
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-100
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 7e-97
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 4e-96
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-90
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 9e-87
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 6e-79
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 6e-67
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-66
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-38
1txo_A237 Putative bacterial enzyme; serine/threonine protei 2e-23
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 6e-23
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 5e-21
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 7e-20
3rnr_A211 Stage II sporulation E family protein; structural 3e-18
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
 Score =  310 bits (797), Expect = e-107
 Identities = 83/265 (31%), Positives = 135/265 (50%), Gaps = 13/265 (4%)

Query: 24  RTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKN 83
           + +  + G +S  GK    E+  +    A    +V +F VYDGHGG   +++   H+ K 
Sbjct: 4   KISLENVGCASQIGKRKENEDRFDF---AQLTDEVLYFAVYDGHGGPAAADFCHTHMEKC 60

Query: 84  LSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDT----GSTASTAVLL-GDRLVVAN 138
           +       ++ +T +   F   D+ + S  +     T    G+TA+ A+L  G  LVVA+
Sbjct: 61  IMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVAS 120

Query: 139 VGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIW--AGTWRVGGVLPVSRAFG 196
           VGDSR +  R G  + L++DH P+  DE++RI+  GGFV W   G   V G L ++R+ G
Sbjct: 121 VGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIG 180

Query: 197 DKLLKQY-VVAEPEIQEEEIDGID--FIIVASDGLWNVISNEEAVAMVEHITDAEAASRK 253
           D  LK   V+AEPE +  ++   D  F+++ +DG+  +++++E    V    D   A+  
Sbjct: 181 DLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHA 240

Query: 254 LITDAYARGSSDNITCVVVRFENSR 278
           +   A   G+ DN T VVV F    
Sbjct: 241 VTEQAIQYGTEDNSTAVVVPFGAWG 265
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query281
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.92
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.91
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.84
3f79_A255 Probable two-component response regulator; adaptor 99.83
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.46
3eq2_A394 Probable two-component response regulator; adaptor 98.96
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2e-51  Score=356.70  Aligned_cols=258  Identities=36%  Similarity=0.530  Sum_probs=218.4

Q ss_pred             eeeeccCCceEEEEeecccCCCCCCcceEEeeccCC-CCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCc-------
Q 045213           19 FLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVD-RQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDF-------   90 (281)
Q Consensus        19 ~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~-~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~-------   90 (281)
                      ....+.+..|.+++.|++|+|+.|||++++...... ..+..+|+|||||||+.+++++++.+.+.+.+....       
T Consensus        15 ~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~   94 (307)
T 2p8e_A           15 HNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSG   94 (307)
T ss_dssp             EEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC------
T ss_pred             ccccCCCCCeeEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccc
Confidence            333445678999999999999999999988643221 245789999999999999999999999998753211       


Q ss_pred             ------hHhHHHHHHHHHHHHHHHHHhhhh--cCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCC
Q 045213           91 ------IEDTKTAIVEVFTNTDENYLSEEK--GQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPD  162 (281)
Q Consensus        91 ------~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~  162 (281)
                            ...+.+.|.++|..+++.+.....  .....+|||++++++.+++++++|+||||+|++|++++.+||+||++.
T Consensus        95 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~  174 (307)
T 2p8e_A           95 SALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPC  174 (307)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTT
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCC
Confidence                  245688899999999999887532  234579999999999999999999999999999999999999999999


Q ss_pred             ChhHHHHHHHcCCeEEeCCceeecCccccccccCCCCCcc---------ccccCCceeEEEecCCe-EEEEEcCCCccCC
Q 045213          163 PADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQ---------YVVAEPEIQEEEIDGID-FIIVASDGLWNVI  232 (281)
Q Consensus       163 ~~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~~---------~~~~~p~~~~~~l~~~d-~lil~SDGv~d~l  232 (281)
                      ++.|..|+...||.+..   .|.++.+.+||+||+..+|.         .+.++|++..+++.++| +||||||||||++
T Consensus       175 ~~~E~~rI~~~gg~v~~---~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~l  251 (307)
T 2p8e_A          175 NPREKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVM  251 (307)
T ss_dssp             SHHHHHHHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTS
T ss_pred             CHHHHHHHHHcCCEEEe---CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCC
Confidence            99999999999998763   46778889999999988763         46889999999999976 7999999999999


Q ss_pred             CHHHHHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCCC
Q 045213          233 SNEEAVAMVEH----ITDAEAASRKLITDAYARGSSDNITCVVVRFENSRS  279 (281)
Q Consensus       233 ~~~ei~~~~~~----~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~~  279 (281)
                      +++++.++++.    ..+++++|+.|++.|+.+|+.||+||||+++...+.
T Consensus       252 s~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~  302 (307)
T 2p8e_A          252 SNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEGH  302 (307)
T ss_dssp             CHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-----
T ss_pred             CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCCc
Confidence            99999999986    578999999999999999999999999999987653
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 281
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 8e-54
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 6e-31
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 8e-54
 Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 29/277 (10%)

Query: 27  KFSYGYSSFNGKNSSMEEFCEATLSAVD-RQKVAFFGVYDGHGGSRTSEYLRNHLFKNLS 85
              YG SS  G    ME+   A +      +  +FF VYDGH GS+ ++Y   HL  +++
Sbjct: 20  GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHIT 79

Query: 86  SHPDF--------IEDTKTAIVEVFTNTDENY--LSEEKGQQGDTGSTASTAVLLGDRLV 135
           ++ DF        +E+ K  I   F   DE+   +SE+K     +GSTA   ++      
Sbjct: 80  NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 139

Query: 136 VANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAF 195
             N GDSR +  R       + DHKP    E++RI++AGG V+     RV G L VSRA 
Sbjct: 140 FINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRAL 196

Query: 196 GDKLLK---------QYVVAEPEIQEEEI--DGIDFIIVASDGLWNVISNEEAVAMVEHI 244
           GD   K         Q V  EPE+ + E   +   FII+A DG+W+V+ NEE    V   
Sbjct: 197 GDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSR 256

Query: 245 ----TDAEAASRKLITDAYARGSSDNITCVVVRFENS 277
                D E    +++     +GS DN++ +++ F N+
Sbjct: 257 LEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query281
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-53  Score=361.87  Aligned_cols=261  Identities=33%  Similarity=0.508  Sum_probs=226.7

Q ss_pred             CCcceeeeccCCceEEEEeecccCCCCCCcceEEeeccCCC-CceEEEEEecCCChhHHHHHHHHHHHHHHhcCC-----
Q 045213           15 GGKSFLTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDR-QKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHP-----   88 (281)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~-~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~-----   88 (281)
                      +-+....-+.+..++||++|++|+|++|||++.+.....++ +++.+|+|||||||+.+++++++.+++.+.+..     
T Consensus         8 ~~~k~~~~~~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~   87 (295)
T d1a6qa2           8 KMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGS   87 (295)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCS
T ss_pred             CcccCcccccCCceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccc
Confidence            33455556678889999999999999999999887654433 567899999999999999999999999886643     


Q ss_pred             ---CchHhHHHHHHHHHHHHHHHHHhh--hhcCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCC
Q 045213           89 ---DFIEDTKTAIVEVFTNTDENYLSE--EKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDP  163 (281)
Q Consensus        89 ---~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~  163 (281)
                         ...+++.++|.++|..+++.+...  .......+|||++++++.++++|++|+||||+|++|++++++||.||++.+
T Consensus        88 ~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~  167 (295)
T d1a6qa2          88 AGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSN  167 (295)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCccc
Confidence               233567889999999999887653  334556799999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHcCCeEEeCCceeecCccccccccCCCCCc---------cccccCCceeEEEecC--CeEEEEEcCCCccCC
Q 045213          164 ADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLK---------QYVVAEPEIQEEEIDG--IDFIIVASDGLWNVI  232 (281)
Q Consensus       164 ~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~~--~d~lil~SDGv~d~l  232 (281)
                      +.|++|+...||.+..   .+.++.+.+||++|+..+|         +.+++.|++..+++..  +++||||||||||+|
T Consensus       168 ~~E~~Ri~~~gg~v~~---~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l  244 (295)
T d1a6qa2         168 PLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVM  244 (295)
T ss_dssp             HHHHHHHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTS
T ss_pred             HHHHhhHhhcCCcccc---cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccC
Confidence            9999999999999864   4788889999999999887         3488999999998853  568999999999999


Q ss_pred             CHHHHHHHHHc----cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCC
Q 045213          233 SNEEAVAMVEH----ITDAEAASRKLITDAYARGSSDNITCVVVRFENSR  278 (281)
Q Consensus       233 ~~~ei~~~~~~----~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~  278 (281)
                      +++|+.+++++    ..+++.+|+.|++.|+.+++.||+|||||+|++..
T Consensus       245 ~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         245 GNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             CHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             CHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            99999999865    37899999999999999999999999999997653
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure